View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1137_low_156 (Length: 275)

Name: NF1137_low_156
Description: NF1137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1137_low_156
NF1137_low_156
[»] chr5 (42 HSPs)
chr5 (20-268)||(1456985-1457233)
chr5 (20-268)||(15044700-15044948)
chr5 (20-268)||(43592293-43592541)
chr5 (20-268)||(43598738-43598986)
chr5 (20-268)||(43604230-43604478)
chr5 (20-268)||(43609722-43609970)
chr5 (20-268)||(27449828-27450076)
chr5 (20-268)||(27444984-27445232)
chr5 (20-237)||(28807429-28807643)
chr5 (19-184)||(30631419-30631586)
chr5 (20-237)||(37556478-37556693)
chr5 (20-237)||(37561300-37561515)
chr5 (20-185)||(31180228-31180394)
chr5 (20-237)||(2785389-2785608)
chr5 (20-237)||(33791330-33791549)
chr5 (20-237)||(31396843-31397064)
chr5 (20-237)||(31401700-31401921)
chr5 (20-185)||(38192187-38192353)
chr5 (20-185)||(38219412-38219578)
chr5 (20-185)||(24135862-24136028)
chr5 (20-139)||(33768193-33768314)
chr5 (23-185)||(35387679-35387842)
chr5 (185-262)||(30631640-30631716)
chr5 (185-262)||(31180447-31180523)
chr5 (38-185)||(15464564-15464712)
chr5 (185-262)||(24136080-24136156)
chr5 (28-160)||(9353275-9353407)
chr5 (28-131)||(10281773-10281877)
chr5 (28-101)||(36932351-36932425)
chr5 (28-184)||(14520252-14520408)
chr5 (28-131)||(3880321-3880425)
chr5 (28-131)||(11916943-11917047)
chr5 (37-183)||(12084096-12084241)
chr5 (185-248)||(35387893-35387955)
chr5 (38-150)||(19588778-19588891)
chr5 (28-89)||(28832281-28832343)
chr5 (28-92)||(17003970-17004035)
chr5 (185-248)||(38219629-38219691)
chr5 (28-70)||(4410241-4410283)
chr5 (185-248)||(9353140-9353200)
chr5 (37-89)||(42127423-42127476)
chr5 (186-237)||(33768365-33768417)
[»] chr8 (41 HSPs)
chr8 (20-268)||(7289749-7289997)
chr8 (20-262)||(25328108-25328349)
chr8 (20-185)||(6311311-6311477)
chr8 (20-237)||(39784678-39784893)
chr8 (20-237)||(35745405-35745624)
chr8 (20-185)||(36979391-36979558)
chr8 (20-185)||(30655660-30655827)
chr8 (20-184)||(33037724-33037889)
chr8 (20-237)||(10684116-10684335)
chr8 (20-185)||(18853083-18853251)
chr8 (20-185)||(18870477-18870645)
chr8 (20-185)||(4759991-4760158)
chr8 (20-185)||(10689058-10689226)
chr8 (20-185)||(1261871-1262037)
chr8 (28-185)||(31071146-31071304)
chr8 (185-268)||(6311532-6311614)
chr8 (185-262)||(18870348-18870424)
chr8 (173-262)||(25327982-25328070)
chr8 (20-185)||(26287915-26288070)
chr8 (20-185)||(26301172-26301327)
chr8 (20-185)||(26313166-26313321)
chr8 (185-262)||(30655880-30655956)
chr8 (185-262)||(10688927-10689003)
chr8 (185-262)||(18852954-18853030)
chr8 (185-262)||(4759861-4759938)
chr8 (185-262)||(33037595-33037671)
chr8 (28-131)||(4456050-4456153)
chr8 (28-160)||(7412363-7412495)
chr8 (185-259)||(36979611-36979683)
chr8 (28-92)||(26403240-26403305)
chr8 (185-248)||(1261758-1261820)
chr8 (28-101)||(19175755-19175829)
chr8 (28-131)||(23799548-23799652)
chr8 (28-101)||(6127243-6127318)
chr8 (28-89)||(4696609-4696671)
chr8 (28-70)||(9765852-9765894)
chr8 (28-147)||(5702438-5702558)
chr8 (28-89)||(19752407-19752469)
chr8 (185-248)||(7412569-7412629)
chr8 (37-70)||(18810982-18811015)
chr8 (185-242)||(31071039-31071095)
[»] chr6 (26 HSPs)
chr6 (20-268)||(11856988-11857236)
chr6 (20-268)||(22010520-22010768)
chr6 (20-262)||(14737406-14737647)
chr6 (20-262)||(14742266-14742507)
chr6 (20-256)||(28184519-28184757)
chr6 (20-237)||(28155425-28155640)
chr6 (20-237)||(6438515-6438730)
chr6 (20-237)||(16838758-16838977)
chr6 (20-237)||(6005431-6005650)
chr6 (20-237)||(33330297-33330516)
chr6 (20-237)||(33335794-33336013)
chr6 (20-185)||(5674685-5674853)
chr6 (185-262)||(5674557-5674633)
chr6 (38-185)||(22709050-22709188)
chr6 (28-156)||(5757425-5757553)
chr6 (28-131)||(5572212-5572316)
chr6 (28-91)||(10077176-10077240)
chr6 (28-101)||(21356058-21356132)
chr6 (20-101)||(21801344-21801428)
chr6 (28-101)||(18232867-18232942)
chr6 (19-91)||(4629966-4630040)
chr6 (46-101)||(22963739-22963796)
chr6 (46-101)||(23824597-23824654)
chr6 (38-90)||(31086485-31086538)
chr6 (39-101)||(31979546-31979610)
chr6 (20-52)||(5343495-5343527)
[»] chr3 (53 HSPs)
chr3 (20-268)||(22173018-22173266)
chr3 (20-237)||(18656449-18656664)
chr3 (20-185)||(28503780-28503947)
chr3 (20-237)||(2676939-2677158)
chr3 (20-237)||(2672783-2673002)
chr3 (50-185)||(28501613-28501750)
chr3 (20-185)||(7167258-7167425)
chr3 (20-237)||(8512231-8512450)
chr3 (20-237)||(8517111-8517330)
chr3 (20-237)||(24968121-24968340)
chr3 (20-185)||(40372712-40372878)
chr3 (20-182)||(8738982-8739146)
chr3 (20-182)||(9091220-9091384)
chr3 (20-185)||(2671502-2671669)
chr3 (20-185)||(8477376-8477545)
chr3 (20-185)||(26928507-26928674)
chr3 (20-237)||(32475499-32475717)
chr3 (20-237)||(32480357-32480575)
chr3 (28-185)||(32143343-32143501)
chr3 (20-185)||(1305962-1306128)
chr3 (28-185)||(27452980-27453138)
chr3 (185-262)||(7167478-7167555)
chr3 (185-262)||(2671373-2671449)
chr3 (185-262)||(8477598-8477674)
chr3 (185-262)||(8738850-8738926)
chr3 (185-262)||(40372583-40372659)
chr3 (185-262)||(9091088-9091164)
chr3 (28-160)||(27974884-27975017)
chr3 (185-262)||(28501483-28501560)
chr3 (185-262)||(28503650-28503727)
chr3 (28-183)||(6794623-6794778)
chr3 (28-131)||(8370448-8370551)
chr3 (28-131)||(16264372-16264475)
chr3 (28-131)||(18552844-18552948)
chr3 (28-131)||(36029115-36029219)
chr3 (28-101)||(1736295-1736370)
chr3 (28-101)||(48438236-48438311)
chr3 (28-101)||(21711245-21711319)
chr3 (28-89)||(27986449-27986511)
chr3 (28-89)||(33386669-33386731)
chr3 (28-132)||(40592742-40592847)
chr3 (28-101)||(30709780-30709855)
chr3 (28-131)||(3715963-3716067)
chr3 (39-101)||(26299021-26299085)
chr3 (20-55)||(10207948-10207983)
chr3 (28-101)||(25795803-25795878)
chr3 (28-131)||(40844674-40844777)
chr3 (37-73)||(4386947-4386983)
chr3 (28-89)||(1417493-1417555)
chr3 (28-89)||(37466313-37466375)
chr3 (28-89)||(39039995-39040057)
chr3 (185-242)||(1306179-1306235)
chr3 (37-74)||(53894082-53894119)
[»] chr4 (32 HSPs)
chr4 (20-262)||(51520471-51520713)
chr4 (20-268)||(9224230-9224478)
chr4 (20-268)||(9229017-9229265)
chr4 (20-262)||(3814038-3814278)
chr4 (20-237)||(45357151-45357367)
chr4 (20-237)||(45347671-45347888)
chr4 (20-237)||(5732679-5732894)
chr4 (20-237)||(18855741-18855956)
chr4 (20-185)||(24741954-24742121)
chr4 (20-137)||(56146664-56146782)
chr4 (20-183)||(29760655-29760821)
chr4 (179-268)||(18712589-18712677)
chr4 (185-262)||(29760874-29760951)
chr4 (185-262)||(24742174-24742250)
chr4 (28-185)||(31985552-31985708)
chr4 (20-185)||(28468455-28468612)
chr4 (28-101)||(36315230-36315304)
chr4 (28-101)||(36329439-36329513)
chr4 (28-156)||(5396618-5396746)
chr4 (28-131)||(10047401-10047505)
chr4 (28-101)||(39246016-39246091)
chr4 (37-101)||(16623293-16623359)
chr4 (28-91)||(5143281-5143345)
chr4 (28-184)||(5147699-5147856)
chr4 (28-89)||(5269204-5269266)
chr4 (39-131)||(16630651-16630744)
chr4 (39-92)||(38152449-38152503)
chr4 (28-131)||(3796490-3796594)
chr4 (28-92)||(24333831-24333896)
chr4 (37-131)||(3777580-3777674)
chr4 (28-92)||(6743425-6743490)
chr4 (185-248)||(28468342-28468404)
[»] scaffold0135 (1 HSPs)
scaffold0135 (20-268)||(34885-35133)
[»] chr7 (41 HSPs)
chr7 (20-268)||(12396925-12397173)
chr7 (20-260)||(12406345-12406585)
chr7 (20-268)||(24024150-24024397)
chr7 (20-268)||(31109406-31109654)
chr7 (20-237)||(19992327-19992544)
chr7 (20-237)||(21812092-21812309)
chr7 (20-185)||(20357463-20357630)
chr7 (20-237)||(24266054-24266273)
chr7 (20-237)||(24261175-24261394)
chr7 (20-185)||(2057979-2058147)
chr7 (20-185)||(1533359-1533527)
chr7 (20-185)||(21639822-21639988)
chr7 (20-185)||(18408777-18408943)
chr7 (20-237)||(16884943-16885162)
chr7 (20-185)||(21646020-21646186)
chr7 (20-237)||(16880087-16880306)
chr7 (20-185)||(18413654-18413819)
chr7 (20-96)||(4866744-4866820)
chr7 (187-262)||(4873310-4873384)
chr7 (185-262)||(20357334-20357410)
chr7 (185-262)||(1533231-1533307)
chr7 (185-262)||(2058202-2058278)
chr7 (28-183)||(29159825-29159982)
chr7 (28-184)||(21983306-21983464)
chr7 (28-147)||(2580412-2580531)
chr7 (37-160)||(44848627-44848750)
chr7 (28-131)||(2647667-2647771)
chr7 (28-131)||(46516281-46516385)
chr7 (28-101)||(49091683-49091758)
chr7 (37-101)||(33332450-33332516)
chr7 (28-131)||(55970-56073)
chr7 (28-150)||(20284111-20284233)
chr7 (185-248)||(21640039-21640101)
chr7 (185-248)||(21646237-21646299)
chr7 (28-89)||(9190021-9190083)
chr7 (37-90)||(35960847-35960901)
chr7 (37-184)||(2479368-2479514)
chr7 (37-131)||(4796638-4796733)
chr7 (185-248)||(18408993-18409055)
chr7 (28-70)||(28617258-28617300)
chr7 (37-89)||(9185178-9185231)
[»] chr1 (33 HSPs)
chr1 (24-268)||(41398254-41398498)
chr1 (24-268)||(41390599-41390843)
chr1 (20-237)||(25444944-25445160)
chr1 (20-237)||(39445514-39445729)
chr1 (20-237)||(44023729-44023944)
chr1 (20-237)||(1054867-1055082)
chr1 (20-185)||(24787280-24787447)
chr1 (20-237)||(43988314-43988535)
chr1 (20-185)||(24202686-24202852)
chr1 (20-185)||(19358760-19358926)
chr1 (20-185)||(19361349-19361515)
chr1 (20-185)||(19379989-19380155)
chr1 (111-237)||(25439751-25439875)
chr1 (186-262)||(24787151-24787226)
chr1 (28-158)||(26644842-26644972)
chr1 (28-160)||(3281730-3281862)
chr1 (28-183)||(47703855-47704011)
chr1 (37-131)||(21536541-21536635)
chr1 (185-248)||(24202573-24202635)
chr1 (37-101)||(27104372-27104438)
chr1 (28-101)||(16124516-16124591)
chr1 (28-101)||(19072950-19073025)
chr1 (28-101)||(19120840-19120915)
chr1 (118-185)||(19366225-19366292)
chr1 (28-131)||(9476283-9476387)
chr1 (28-92)||(29651833-29651898)
chr1 (37-184)||(13604541-13604689)
chr1 (28-92)||(775694-775759)
chr1 (28-92)||(13598420-13598485)
chr1 (28-99)||(37069792-37069864)
chr1 (28-89)||(32889461-32889523)
chr1 (40-89)||(47098837-47098887)
chr1 (185-248)||(19361237-19361298)
[»] chr2 (37 HSPs)
chr2 (20-268)||(39811811-39812059)
chr2 (22-237)||(32246804-32247018)
chr2 (20-185)||(11098843-11099010)
chr2 (20-237)||(19344435-19344655)
chr2 (20-237)||(19349293-19349513)
chr2 (20-151)||(44312563-44312695)
chr2 (20-185)||(14291502-14291669)
chr2 (20-185)||(3491764-3491930)
chr2 (20-185)||(9296317-9296484)
chr2 (19-185)||(25403646-25403813)
chr2 (20-185)||(25398509-25398675)
chr2 (37-185)||(25407653-25407802)
chr2 (185-262)||(11098714-11098790)
chr2 (28-183)||(13569350-13569506)
chr2 (20-185)||(40738857-40739012)
chr2 (20-183)||(8040073-8040240)
chr2 (185-262)||(9296189-9296265)
chr2 (185-262)||(14291722-14291798)
chr2 (28-160)||(28259120-28259252)
chr2 (28-131)||(10445415-10445519)
chr2 (28-101)||(34388880-34388955)
chr2 (39-131)||(34682305-34682398)
chr2 (37-183)||(8390069-8390216)
chr2 (28-131)||(10707223-10707327)
chr2 (37-131)||(17865234-17865329)
chr2 (20-101)||(21629957-21630040)
chr2 (28-101)||(20522242-20522317)
chr2 (28-184)||(36757681-36757837)
chr2 (28-131)||(14698979-14699082)
chr2 (28-131)||(23078442-23078545)
chr2 (37-92)||(31056075-31056131)
chr2 (185-248)||(25409860-25409922)
chr2 (28-101)||(42039670-42039744)
chr2 (28-131)||(33118158-33118262)
chr2 (28-131)||(39482953-39483057)
chr2 (39-92)||(16940219-16940273)
chr2 (39-92)||(17010884-17010938)
[»] scaffold0355 (2 HSPs)
scaffold0355 (20-211)||(9523-9713)
scaffold0355 (93-268)||(3671-3845)
[»] scaffold0464 (1 HSPs)
scaffold0464 (20-237)||(377-592)
[»] scaffold0197 (2 HSPs)
scaffold0197 (20-237)||(14161-14380)
scaffold0197 (20-237)||(19017-19236)
[»] scaffold0259 (1 HSPs)
scaffold0259 (20-237)||(2103-2322)
[»] scaffold0028 (1 HSPs)
scaffold0028 (20-237)||(148808-149027)
[»] scaffold0188 (4 HSPs)
scaffold0188 (20-185)||(17869-18035)
scaffold0188 (20-185)||(23962-24128)
scaffold0188 (185-248)||(17756-17818)
scaffold0188 (185-248)||(23849-23911)
[»] scaffold0009 (2 HSPs)
scaffold0009 (20-75)||(181980-182035)
scaffold0009 (142-237)||(176829-176925)
[»] scaffold0140 (1 HSPs)
scaffold0140 (28-101)||(8420-8494)
[»] scaffold0087 (2 HSPs)
scaffold0087 (42-156)||(43908-44022)
scaffold0087 (28-131)||(36804-36907)
[»] scaffold0148 (1 HSPs)
scaffold0148 (28-131)||(10751-10855)
[»] scaffold0036 (1 HSPs)
scaffold0036 (20-101)||(85696-85779)
[»] scaffold0006 (3 HSPs)
scaffold0006 (37-184)||(133198-133346)
scaffold0006 (28-92)||(2514-2579)
scaffold0006 (28-92)||(5705-5770)
[»] scaffold0098 (1 HSPs)
scaffold0098 (37-89)||(45284-45337)
[»] scaffold0154 (1 HSPs)
scaffold0154 (37-70)||(11500-11533)
[»] scaffold0176 (1 HSPs)
scaffold0176 (37-131)||(17294-17389)


Alignment Details
Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 1457233 - 1456985
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagctttcaagctt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  1457233 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctt 1457134  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  1457133 tacacatgaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaacccaaggtgattacaatgttttt-cccaaccca 1457035  T
Q  219 agagacactctcaacaaagacacttaacccattggttccctcctatgcta 268  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  1457034 agagacactctcaacaaagacactcaacccattggttccctcctttgcta 1456985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 15044700 - 15044948
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagcttt 119  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15044700 cagttcagccaatatggcctaatatgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagcttt 15044799  T
Q  120 acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaacccaa 219  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||    
T  15044800 acacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaacccaa 15044899  T
Q  220 gagacactctcaacaaagacacttaacccattggttccctcctatgcta 268  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  15044900 gagacactctcaacaaagacactcaacccattggttccctcctttgcta 15044948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 43592293 - 43592541
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagctttcaagctt 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  43592293 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctt 43592392  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||||||    
T  43592393 tacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgttttt-cccaaccca 43592491  T
Q  219 agagacactctcaacaaagacacttaacccattggttccctcctatgcta 268  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  43592492 agagacactctcaacaaagacactcaacccattggttccctcctttgcta 43592541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 43598738 - 43598986
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagctttcaagctt 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  43598738 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctt 43598837  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||||||    
T  43598838 tacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgttttt-cccaaccca 43598936  T
Q  219 agagacactctcaacaaagacacttaacccattggttccctcctatgcta 268  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  43598937 agagacactctcaacaaagacactcaacccattggttccctcctttgcta 43598986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 43604230 - 43604478
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagctttcaagctt 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  43604230 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctt 43604329  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||||||    
T  43604330 tacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgttttt-cccaaccca 43604428  T
Q  219 agagacactctcaacaaagacacttaacccattggttccctcctatgcta 268  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  43604429 agagacactctcaacaaagacactcaacccattggttccctcctttgcta 43604478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 43609722 - 43609970
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagctttcaagctt 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  43609722 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctt 43609821  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||||||    
T  43609822 tacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgttttt-cccaaccca 43609920  T
Q  219 agagacactctcaacaaagacacttaacccattggttccctcctatgcta 268  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  43609921 agagacactctcaacaaagacactcaacccattggttccctcctttgcta 43609970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 27449828 - 27450076
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagctttcaagctt 118  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  27449828 cagttcagccaatatagcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctt 27449927  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||||||    
T  27449928 tacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgttttt-cccaaccca 27450026  T
Q  219 agagacactctcaacaaagacacttaacccattggttccctcctatgcta 268  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  27450027 agagacactctcaacaaagacactcaacccattggttccctcctttgcta 27450076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 27444984 - 27445232
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagctttcaagctt 118  Q
    |||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  27444984 cagttcaggcaatatagcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctt 27445083  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||||||    
T  27445084 tacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgttttt-cccaaccca 27445182  T
Q  219 agagacactctcaacaaagacacttaacccattggttccctcctatgcta 268  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  27445183 agagacactctcaacaaagacactcaacccattggttccctcctttgcta 27445232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 28807643 - 28807429
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagcttt 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||    
T  28807643 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaagaatctagctttcaagcttt 28807545  T
Q  120 acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaacccaa 219  Q
    ||||| |||||||||||||| ||||||||||||| ||| ||||||||||||  |||||||| ||| ||||||||||||||||||||||| ||||||| ||    
T  28807544 acacatgaacaaaccctaga-tctaccctttggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgttttt-cccaacctaa 28807447  T
Q  220 gagacactctcaacaaag 237  Q
    || ||||||||| |||||    
T  28807446 gaaacactctcatcaaag 28807429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 30631419 - 30631586
Alignment:
Q  19 tcagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagctttcaagc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||| |||||||    
T  30631419 tcagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaactctagccttcaagc 30631518  T
Q  117 tttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaa 184  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30631519 tttacacatgaacaaaccatagattctaccctttggtgtttccccactctcacaatatgaaccctaaa 30631586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 37556693 - 37556478
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctt-tcaagctt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||| ||||||||    
T  37556693 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagtatctagcttatcaagctt 37556594  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| ||||||||||||||  |||||||||||| ||| ||||||||||||  |||||||| ||| ||||||||||||||||||||||  ||||||| |    
T  37556593 tacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgtttt--cccaaccta 37556497  T
Q  219 agagacactctcaacaaag 237  Q
    ||| |||||| || |||||    
T  37556496 agaaacactcacatcaaag 37556478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 37561515 - 37561300
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctt-tcaagctt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||| ||||||||    
T  37561515 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagtatctagcttatcaagctt 37561416  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| ||||||||||||||  |||||||||||| ||| ||||||||||||  |||||||| ||| ||||||||||||||||||||||  ||||||| |    
T  37561415 tacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgtttt--cccaaccta 37561319  T
Q  219 agagacactctcaacaaag 237  Q
    ||| |||||| || |||||    
T  37561318 agaaacactcacatcaaag 37561300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 31180228 - 31180394
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagctttcaagct 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||| ||||||||    
T  31180228 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaactctagccttcaagct 31180327  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  31180328 ttacacaag-acaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccataaaa 31180394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 2785389 - 2785608
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagc-tttcaagct 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| |||||||||    
T  2785389 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagct 2785488  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaacc 216  Q
    |||| || ||||||||||||||  |||||||||||| ||| ||||| ||||||  ||||||||  || |||||||||||||||||||| ||| |||||||    
T  2785489 ttactcatgaacaaaccctaga-cctaccctttggtattttcccaccctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacc 2785587  T
Q  217 caagagacactctcaacaaag 237  Q
     |||| ||||||||| |||||    
T  2785588 taagaaacactctcatcaaag 2785608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 33791330 - 33791549
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagc-tttcaagct 117  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| |||||||||    
T  33791330 cagttcagccaatgtggcctaatctgggggaaagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagct 33791429  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaacc 216  Q
    ||||||| ||||||||||||||  |||||||||||| ||| ||||| ||||||  ||||||||  || |||||||||||||||||||| ||| |||||||    
T  33791430 ttacacatgaacaaaccctaga-cctaccctttggtattttcccaccctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacc 33791528  T
Q  217 caagagacactctcaacaaag 237  Q
     |||| ||||||||| |||||    
T  33791529 taagaaacactctcatcaaag 33791549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 31397064 - 31396843
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagctt-tcaagct 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||||| |||||||    
T  31397064 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagct 31396965  T
Q  118 ttacacaag--aacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaa 214  Q
    |||||||||  || |||||||||| ||||||||||||  ||| ||||  ||||||  ||||||||  || |||||||||||||||||||| ||| |||||    
T  31396964 ttacacaagacaaaaaaccctaga-tctaccctttggcattttcccatcctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaa 31396866  T
Q  215 cccaagagacactctcaacaaag 237  Q
    || |||| ||||||||| |||||    
T  31396865 cctaagatacactctcatcaaag 31396843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 31401921 - 31401700
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagctt-tcaagct 117  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||||| |||||||    
T  31401921 cagttcagccaatgtggcctaatatgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagct 31401822  T
Q  118 ttacacaag--aacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaa 214  Q
    |||||||||  || |||| ||||| ||||||||||||  ||| ||||  ||||||  ||||||||  || |||||||||||||||||||| ||| |||||    
T  31401821 ttacacaagacaaaaaactctaga-tctaccctttggcattttcccatcctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaa 31401723  T
Q  215 cccaagagacactctcaacaaag 237  Q
    || |||| ||||||||| |||||    
T  31401722 cctaagatacactctcatcaaag 31401700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 38192187 - 38192353
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagct 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    |||||| ||||||    
T  38192187 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagct 38192286  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    | ||||||||||||  ||||| |||||||| || |||||||||||||||||||| |||||||||||||    
T  38192287 t-acacaagaacaagtcctagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaa 38192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 38219412 - 38219578
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagct 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    |||||| ||||||    
T  38219412 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagct 38219511  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    | ||||||||||||  ||||| |||||||| || |||||||||||||||||||| |||||||||||||    
T  38219512 t-acacaagaacaagtcctagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaa 38219578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 24135862 - 24136028
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagct 117  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||| || || || |||||||||||||| ||||||||||    |||||| ||||||    
T  24135862 cagttcagccaatatggcctaatctgggggagagagcagctatccaatgcactaagatgaaagtgttacaaagggttacaagaaaaatagcttgcaagct 24135961  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    | ||||||||||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  24135962 t-acacaagaacaagtcctagattctaccctttggtgtttccccactctcacaatgtgaaccctaaaa 24136028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 33768193 - 33768314
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagc-tttcaagct 117  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| |||||||||    
T  33768193 cagttcagccaatgtggcctaatctgggggggagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagct 33768292  T
Q  118 ttacacaagaacaaaccctaga 139  Q
    ||||||| ||||||||||||||    
T  33768293 ttacacatgaacaaaccctaga 33768314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 185
Target Start/End: Original strand, 35387679 - 35387842
Alignment:
Q  23 ttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagcttta 120  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||| ||||||||||    |||||| ||||||| |    
T  35387679 ttcagccaatatggcctaatctgggggagagagcagctctccaatctactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagctt-a 35387777  T
Q  121 cacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    |||||||| ||  ||||| |||||||| || |||||||||||||||||||| |||||||||||||    
T  35387778 cacaagaataagtcctagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaa 35387842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 30631640 - 30631716
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30631640 acccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaacccattggttccctcct 30631716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 31180447 - 31180523
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  31180447 acccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccctttggttccctcct 31180523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 185
Target Start/End: Original strand, 15464564 - 15464712
Alignment:
Q  38 ctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagctttacacaagaacaaaccc 135  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    |||||| ||||||| ||||||||||||  ||    
T  15464564 ctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaaaatagcttgcaagctt-acacaagaacaagacc 15464662  T
Q  136 tagattctaccctttggtgtttccccactctcacaa-catgaaccctaaaa 185  Q
    ||  |||||||| || |||||| |||||||||||||  |||||||||||||    
T  15464663 taatttctacccatttgtgttt-cccactctcacaataatgaaccctaaaa 15464712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 24136080 - 24136156
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||| ||||| |||||||||||||    
T  24136080 acccaaggtgattacaatgtttttccc-aacccaagagacactttctacaaagacactcaaccctttggttccctcct 24136156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 9353407 - 9353275
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaag 126  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    ||||| ||||| |||||||||    
T  9353407 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaaaaagcttgcaagc-ttacacaag 9353309  T
Q  127 aacaaaccctagattctaccctttggtgtttccc 160  Q
    |||||   |||  |||||||| || |||||||||    
T  9353308 aacaagatctaatttctacccatttgtgtttccc 9353275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 10281773 - 10281877
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || ||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||   |||||| ||||| ||||||||    
T  10281773 ccaatatgacctgatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagc-ttacacaa 10281871  T
Q  126 gaacaa 131  Q
    ||||||    
T  10281872 gaacaa 10281877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 36932425 - 36932351
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 101  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  36932425 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 36932351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 184
Target Start/End: Original strand, 14520252 - 14520408
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaag 126  Q
    ||||| || |||||||| |||| |||||||||||| ||||||| ||||| ||||||||||||||  |||||||||   |||||| ||||| |||||||||    
T  14520252 ccaatatgacctaatctaggggggagagcagctcttcaatccactatgatgaaagtgttacaaagagttacaagaaaatagcttgcaagc-ttacacaag 14520350  T
Q  127 aacaaaccctagattctaccctttggtgtttccccactctcacaa-catgaaccctaaa 184  Q
    |||||  ||||  |||||||| || ||| || ||||||||| |||  ||||||||||||    
T  14520351 aacaagacctaatttctacccatttgtg-ttacccactctctcaattatgaaccctaaa 14520408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 3880321 - 3880425
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || ||||||||| || ||||||||||||||||||||| ||||| |||||||||||||||| |||||||||   ||| || ||||| ||||||||    
T  3880321 ccaatatgacctaatctgaggcagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagtttacaagc-ttacacaa 3880419  T
Q  126 gaacaa 131  Q
    ||||||    
T  3880420 gaacaa 3880425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 11917047 - 11916943
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||||| ||||||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||   ||| || ||||| ||||||||    
T  11917047 ccaatatgacctaatatgggggagagagcagctctccaatccactataatgaaagtgttacaaaagagttacaagaaaatagtttgcaagc-ttacacaa 11916949  T
Q  126 gaacaa 131  Q
    ||||||    
T  11916948 gaacaa 11916943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 183
Target Start/End: Complemental strand, 12084241 - 12084096
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaagaacaaaccc 135  Q
    |||||| ||||| ||||||||||||||||||||| ||||| ||||||||||||||  |||||||||   || |||  |||| ||||||||||||||  ||    
T  12084241 cctaatatggggcagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaattaacttaaaagc-ttacacaagaacaagacc 12084143  T
Q  136 tagattctaccctttggtgtttccccactctcacaacatgaaccctaa 183  Q
    ||  |||||||| || ||| |  ||||||||||||| ||||| |||||    
T  12084142 taatttctacccatttgtg-tcacccactctcacaatatgaatcctaa 12084096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 35387893 - 35387955
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaaccc 248  Q
    |||||||||||||||||||||||| || |||||||||||| ||||| ||||||||||| |||||    
T  35387893 acccaaggtgattacaatgttttttcc-aacccaagagaccctctctacaaagacactcaaccc 35387955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 19588778 - 19588891
Alignment:
Q  38 ctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaagaacaaaccc 135  Q
    |||||||  ||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||   || |||  |||| ||||||||||||||  ||    
T  19588778 ctaatcttagggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattaccttataagc-ttacacaagaacaagacc 19588876  T
Q  136 tagattctacccttt 150  Q
    ||  |||||||||||    
T  19588877 taatttctacccttt 19588891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 28832281 - 28832343
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 89  Q
    ||||| || ||||||||||||||||||||||| |||||||||| || || |||||||||||||    
T  28832281 ccaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaa 28832343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 17004035 - 17003970
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 92  Q
    ||||| || |||||||||||||||||||||||||| ||||||| ||||| |||||| || ||||||    
T  17004035 ccaatatgacctaatctgggggagagagcagctcttcaatccactatgatgaaagtatttcaaaag 17003970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 38219629 - 38219691
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaaccc 248  Q
    |||||||||| ||||||||||||| ||||||||||||||  ||| | ||||||||||| |||||    
T  38219629 acccaaggtgtttacaatgttttt-cccaacccaagagatcctcactacaaagacactcaaccc 38219691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 4410283 - 4410241
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatcca 70  Q
    ||||| || |||| |||||||||||||||||||||||||||||    
T  4410283 ccaatctgacctagtctgggggagagagcagctctccaatcca 4410241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 9353200 - 9353140
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaaccc 248  Q
    |||||||||| |||||||||||   ||||||||||||||  ||| | |||||||||||||||||    
T  9353200 acccaaggtgtttacaatgttt---cccaacccaagagatcctcactacaaagacacttaaccc 9353140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 42127476 - 42127423
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 89  Q
    ||||||||||||||||||||||| | |||||||| || || |||||||||||||    
T  42127476 cctaatctgggggagagagcagccccccaatccactaagatgaaagtgttacaa 42127423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 33768365 - 33768417
Alignment:
Q  186 cccaaggtgattacaatgtt-tttccccaacccaagagacactctcaacaaag 237  Q
    |||||||||||||||||||| ||| ||||||| |||| ||||||||| |||||    
T  33768365 cccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33768417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 7289997 - 7289749
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagctttcaagctt 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  7289997 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctt 7289898  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  7289897 tacacatgaacaaaccctatattctaccctttggtgtttccccactctcacaatatgaaccctaaaacccaaggtgattacaatgttttt-cccaaccca 7289799  T
Q  219 agagacactctcaacaaagacacttaacccattggttccctcctatgcta 268  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  7289798 agagacactctcaacaaagacactcaacccattggttccctcctttgcta 7289749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 20 - 262
Target Start/End: Complemental strand, 25328349 - 25328108
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagcttt 119  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25328349 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagcttt 25328250  T
Q  120 acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaacccaa 219  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25328249 acacatgaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgttttt-cccaacccaa 25328151  T
Q  220 gagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    |||||||||||| |||||||||  ||||||| || ||||||||    
T  25328150 gagacactctcatcaaagacacacaacccataggatccctcct 25328108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 6311311 - 6311477
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagctttcaagct 117  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  6311311 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagccttcaagct 6311410  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6311411 ttacacaag-acaaaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 6311477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 39784893 - 39784678
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctt-tcaagctt 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||    
T  39784893 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaagactctagcttatcaagctt 39784795  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| ||||||||||||||  |||||||||||| ||| ||||||||||||  |||||||| ||| ||||||||||||||||||||||| ||||||| |    
T  39784794 tacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgttttt-cccaaccta 39784697  T
Q  219 agagacactctcaacaaag 237  Q
    |||||| |||||| |||||    
T  39784696 agagactctctcatcaaag 39784678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 35745405 - 35745624
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagc-tttcaagct 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| |||||||||    
T  35745405 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagct 35745504  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaacc 216  Q
    ||||||| ||||||||||||||  |||||||||||| ||| ||||| ||||||  ||||||||  || |||||||||||||||||||| ||| |||||||    
T  35745505 ttacacatgaacaaaccctaga-cctaccctttggtattttcccaccctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacc 35745603  T
Q  217 caagagacactctcaacaaag 237  Q
     |||| ||||||||| |||||    
T  35745604 taagaaacactctcatcaaag 35745624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 36979391 - 36979558
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagctttcaagc 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||| |||||||    
T  36979391 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc 36979490  T
Q  117 tttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36979491 tt-acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaa 36979558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 30655660 - 30655827
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagctttcaagc 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||  |  |||| |||||||    
T  30655660 cagttcagccaatatggcctaatctgggggagagagcagctctccaatctaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc 30655759  T
Q  117 tttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30655760 tt-acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaa 30655827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 184
Target Start/End: Complemental strand, 33037889 - 33037724
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagctttcaagct 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||  |||| |||||||     
T  33037889 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaacaatagccttcaagc- 33037791  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaa 184  Q
    |||||||||||||||||||||||||||||| |  |||||||||||||||||||| ||||||||||||    
T  33037790 ttacacaagaacaaaccctagattctacccatatgtgtttccccactctcacaatatgaaccctaaa 33037724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 10684335 - 10684116
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagctt-tcaagct 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||||| |||||||    
T  10684335 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagct 10684236  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaacc 216  Q
    ||||||||||  ||||||||||  ||||||||||||  || ||||  ||||||  ||||||||  || |||||||||||||||||||| ||| |||||||    
T  10684235 ttacacaagacaaaaccctaga-cctaccctttggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacc 10684137  T
Q  217 caagagacactctcaacaaag 237  Q
     |||| ||||||||| |||||    
T  10684136 taagatacactctcatcaaag 10684116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 18853251 - 18853083
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaagg-ttacaagactc--tagctttcaag 115  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||  |  |||| ||||||    
T  18853251 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatataatgaaagtgttacaaaagggttacaagaaacaatagcattcaag 18853152  T
Q  116 ctttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    ||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  18853151 ctt-acacaagaacaaaccctagattttaccctttggtatttccccactctcacaatatgaaccctaaaa 18853083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 18870645 - 18870477
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaagg-ttacaagactc--tagctttcaag 115  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||  |  |||| ||||||    
T  18870645 cagttcatccaatatggcctaatctgggggagagagcagctctccaatccaatataatgaaagtgttacaaaagggttacaagaaacaatagcattcaag 18870546  T
Q  116 ctttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  18870545 ctt-acacaagaacaaaccctagattctaccctttggtatttccccactctcacaatatgaaccctaaaa 18870477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 4760158 - 4759991
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagctttcaagc 116  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||| |||||||    
T  4760158 cagttcagccaatatggcctaatatgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc 4760059  T
Q  117 tttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
     |||||||||||||| ||||||||||||||| |  |||||||||||||||||||| |||||||||||||    
T  4760058 -ttacacaagaacaagccctagattctacccatatgtgtttccccactctcacaatatgaaccctaaaa 4759991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 10689226 - 10689058
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagctttcaagc 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||  ||  |||| |||||||    
T  10689226 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacagagggttacaagaaacaatagccttcaagc 10689127  T
Q  117 tttacacaagaacaaaccctagattctaccc-tttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
     |||||||||||||| ||||||||||||||| | || ||||||||||||||||||| |||||||||||||    
T  10689126 -ttacacaagaacaagccctagattctacccatatgttgtttccccactctcacaatatgaaccctaaaa 10689058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 1262037 - 1261871
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagct 117  Q
    ||||||| ||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    |||||| ||||||    
T  1262037 cagttcaaccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagct 1261938  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    | ||||||| ||||  |||||||||||||| || |||||||||||||||||||| |||||||||||||    
T  1261937 t-acacaagtacaagacctagattctacccatttgtgtttccccactctcacaatatgaaccctaaaa 1261871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 31071304 - 31071146
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagctttacacaa 125  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    |||||| ||||||| ||||||    
T  31071304 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagctt-acacaa 31071206  T
Q  126 gaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    ||||||  ||||| |||||||| || |||||||||||||||||||| |||||||||||||    
T  31071205 gaacaagtcctagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaa 31071146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 185 - 268
Target Start/End: Original strand, 6311532 - 6311614
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcctatgcta 268  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||    
T  6311532 acccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccctttggttccctcctttgcta 6311614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 18870424 - 18870348
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  18870424 acccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccctttggttccctcct 18870348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 25328070 - 25327982
Alignment:
Q  173 atgaaccctaaaacccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||  ||||||| || ||||||||    
T  25328070 atgaaccctaaaacccaaggtgattacaatgttttt-cccaacccaagagacactctcatcaaagacacacaacccataggatccctcct 25327982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 26287915 - 26288070
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctt 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |    | ||     |||||| ||||| |    
T  26287915 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaga----aaaa-----tagcttgcaagc-t 26288004  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    |||||||||||||  ||||| |||||||| || ||| |||||||||||||||| |||||||||||||    
T  26288005 tacacaagaacaagtcctagtttctacccatttgtg-ttccccactctcacaatatgaaccctaaaa 26288070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 26301172 - 26301327
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctt 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |    | ||     |||||| ||||| |    
T  26301172 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaga----aaaa-----tagcttgcaagc-t 26301261  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    |||||||||||||  ||||| |||||||| || ||| |||||||||||||||| |||||||||||||    
T  26301262 tacacaagaacaagtcctagtttctacccatttgtg-ttccccactctcacaatatgaaccctaaaa 26301327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 26313166 - 26313321
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctt 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |    | ||     |||||| ||||| |    
T  26313166 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaga----aaaa-----tagcttgcaagc-t 26313255  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    |||||||||||||  ||||| |||||||| || ||| |||||||||||||||| |||||||||||||    
T  26313256 tacacaagaacaagtcctagtttctacccatttgtg-ttccccactctcacaatatgaaccctaaaa 26313321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 30655880 - 30655956
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  30655880 acccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccctttggttccctcct 30655956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 10689003 - 10688927
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  10689003 acccaaggtgattacaatgtttttccc-aacccaagagacactctctacaaagacactcaaccctttggttccctcct 10688927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 18853030 - 18852954
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  18853030 acccaaggtgattacaatatttttccc-aacccaagagacactctcaacaaagacactcaaccctttggttccctcct 18852954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 4759938 - 4759861
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||| |||||| ||||||    
T  4759938 acccaaggtgattacaatgttttttcccaacccaagagactctctctacaaagacactcaaccctttggttacctcct 4759861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 33037671 - 33037595
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| || |||||||| ||||| |||||||||||||    
T  33037671 acccaaggtgattacaatgtttttccc-aacccaagagacactctctacgaagacactcaaccctttggttccctcct 33037595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 4456050 - 4456153
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaag 126  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||   |||||  ||||| |||||||||    
T  4456050 ccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaaatagctggcaagc-ttacacaag 4456148  T
Q  127 aacaa 131  Q
    |||||    
T  4456149 aacaa 4456153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 160
Target Start/End: Original strand, 7412363 - 7412495
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaag 126  Q
    ||||| || |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||   || ||| ||||| |||||||||    
T  7412363 ccaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaaataacttgcaagc-ttacacaag 7412461  T
Q  127 aacaaaccctagattctaccctttggtgtttccc 160  Q
    |||||  ||||  |||||||| || |||||||||    
T  7412462 aacaagacctaatttctacccatttgtgtttccc 7412495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 36979611 - 36979683
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccct 259  Q
    |||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||| ||||| ||||||||||    
T  36979611 acccaaggtgattacaatgtttt--cccaacctaagagacactctctacaaagacactcaaccctttggttccct 36979683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 26403305 - 26403240
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 92  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  26403305 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 26403240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 1261820 - 1261758
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaaccc 248  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||    
T  1261820 acccaaggtgattacaatgtttttccc-aacccaagagaccctctctacaaagacactcaaccc 1261758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 19175829 - 19175755
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 101  Q
    ||||| || ||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||  |||||||||    
T  19175829 ccaatatgacctaatctgggggagagagcaactctccaatccactatgatgaaagtgttacaaagagttacaaga 19175755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 23799652 - 23799548
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||||| ||| |||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||   |||||| ||||| ||||||||    
T  23799652 ccaatatgacctaatttggaggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagc-ttacacaa 23799554  T
Q  126 gaacaa 131  Q
    ||||||    
T  23799553 gaacaa 23799548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 6127243 - 6127318
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    ||||| || |||||| ||||| ||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  6127243 ccaatatgacctaatttggggaagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 6127318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 4696671 - 4696609
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 89  Q
    ||||| || ||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||    
T  4696671 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagagttacaa 4696609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 9765894 - 9765852
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatcca 70  Q
    ||||| || ||||||||||||||||||||||||||||||||||    
T  9765894 ccaatatgacctaatctgggggagagagcagctctccaatcca 9765852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 5702558 - 5702438
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||||| |||||||||||||| | |||||||||  ||||| |||||||||||||||| |||||||||   ||||||  |||| ||||||||    
T  5702558 ccaatatgacctaatatgggggagagagcatccctccaatcccctatgatgaaagtgttacaaaagagttacaagaaattagcttataagc-ttacacaa 5702460  T
Q  126 gaacaaaccctagattctaccc 147  Q
    || |||| ||||  ||||||||    
T  5702459 gagcaaaacctaatttctaccc 5702438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 19752469 - 19752407
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 89  Q
    ||||| || |||| ||| ||||||||||||||||||||||||| || || |||||||||||||    
T  19752469 ccaatatgacctagtctaggggagagagcagctctccaatccactaagatgaaagtgttacaa 19752407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 7412569 - 7412629
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaaccc 248  Q
    |||||||||| |||||||||||   ||||||||||||||  ||||| ||||||||||| |||||    
T  7412569 acccaaggtgtttacaatgttt---cccaacccaagagatcctctctacaaagacactcaaccc 7412629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 18811015 - 18810982
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatcca 70  Q
    ||||||||||||||||||||||| ||||||||||    
T  18811015 cctaatctgggggagagagcagccctccaatcca 18810982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 242
Target Start/End: Complemental strand, 31071095 - 31071039
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacact 242  Q
    |||||||||| ||||||||||||| ||||||||||||||  ||| | |||||||||||    
T  31071095 acccaaggtgtttacaatgttttt-cccaacccaagagatcctcactacaaagacact 31071039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-113; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 11856988 - 11857236
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagctttcaagctt 118  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  11856988 cagttcagccaatatggcctaatatgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctt 11857087  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  11857088 tacacatgaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaacccaaggtgattacaatgttttt-cccaaccca 11857186  T
Q  219 agagacactctcaacaaagacacttaacccattggttccctcctatgcta 268  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  11857187 agagacactctcaacaaagacactcaacccattggttccctcctttgcta 11857236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 22010768 - 22010520
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagctttcaagctt 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  22010768 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctt 22010669  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| |||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  22010668 tacacatgaacaaaccctagattctaccctttgatatttccccactctcacaatatgaaccctaaaacccaaggtgattacaatgttttt-cccaaccca 22010570  T
Q  219 agagacactctcaacaaagacacttaacccattggttccctcctatgcta 268  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  22010569 agagacactctcaacaaagacactcaacccattggttccctcctttgcta 22010520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 20 - 262
Target Start/End: Complemental strand, 14737647 - 14737406
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagcttt 119  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14737647 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagcttt 14737548  T
Q  120 acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaacccaa 219  Q
    ||| | |||||||||||||||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||    
T  14737547 acatatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttttt-cccaacccaa 14737449  T
Q  220 gagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  14737448 gagacactctcaacaaagacactcaacccattggttccctcct 14737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 20 - 262
Target Start/End: Complemental strand, 14742507 - 14742266
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagcttt 119  Q
    ||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14742507 cagttcagccaatatgacctaatttgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagcttt 14742408  T
Q  120 acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaacccaa 219  Q
    ||| | |||||||||||||||||||||||||||| ||| ||||||||||||  |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  14742407 acatatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaagtgattacaatgttttt-cccaacccaa 14742309  T
Q  220 gagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14742308 gagacactctcaacaaagacacttaacccattggttccctcct 14742266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 20 - 256
Target Start/End: Original strand, 28184519 - 28184757
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagcttt 119  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  28184519 cagttcagccaatatggcctaatctgggggagagagcagctctccaatctaatatgagaaagtgttacaaaaggttacaacactctagccttcaagcttt 28184618  T
Q  120 acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatg--tttttccccaaccc 217  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||||||||||  ||||||||||||||||||||||||||| |||  |||||||| |||||    
T  28184619 acacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattactatgtttttttcccaaaccc 28184718  T
Q  218 aagagacactctcaacaaagacacttaacccattggttc 256  Q
    |||||||||||||||||||||| || |||||||| ||||    
T  28184719 aagagacactctcaacaaagaccctcaacccatttgttc 28184757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 28155640 - 28155425
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagcttt 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  28155640 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaatttagctttcaagcttt 28155541  T
Q  120 acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaacccaa 219  Q
    ||||| |||||||||||||| ||||||||||||| ||| ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| ||    
T  28155540 acacatgaacaaaccctaga-tctaccctttggtattttcccactctcacactatgaaccctaaatcccaaggtgattacaatgttttt-cccaacctaa 28155443  T
Q  220 gagacactctcaacaaag 237  Q
    || ||||||||| |||||    
T  28155442 gaaacactctcatcaaag 28155425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 6438515 - 6438730
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctt-tcaagctt 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||    
T  6438515 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaagactctagcttgtcaagctt 6438613  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| ||||||||||||||  |||||||||||| ||| ||||||||||||  |||||||| ||| ||||||||||||||||||||||| ||||||| |    
T  6438614 tacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgttttt-cccaaccta 6438711  T
Q  219 agagacactctcaacaaag 237  Q
    ||| || |||||| |||||    
T  6438712 agaaactctctcatcaaag 6438730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 16838758 - 16838977
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagct-ttcaagct 117  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| ||||||| ||||||||    
T  16838758 cagttcagccaatgtggcttaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagctattcaagct 16838857  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaacc 216  Q
    ||||||| |||||||||||||| ||||||||||||| ||| ||||  ||||||  |||||||||||| |||||||||||||||||||| ||| |||||||    
T  16838858 ttacacatgaacaaaccctaga-tctaccctttggtattttcccatcctcacactatgaaccctaaatcccaaggtgattacaatgttgttttcccaacc 16838956  T
Q  217 caagagacactctcaacaaag 237  Q
     |||| ||||||||| |||||    
T  16838957 taagatacactctcatcaaag 16838977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 6005431 - 6005650
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagc-tttcaagct 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| |||||||||    
T  6005431 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagct 6005530  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaacc 216  Q
    ||||||| ||||||||||||||  |||||||||||| ||| ||||| ||||||  ||||||||  || |||||||||||||||||||| ||| |||||||    
T  6005531 ttacacatgaacaaaccctaga-cctaccctttggtattttcccaccctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacc 6005629  T
Q  217 caagagacactctcaacaaag 237  Q
     |||| ||||||||| |||||    
T  6005630 taagaaacactctcatcaaag 6005650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 33330516 - 33330297
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagctt-tcaagct 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||||| |||||||    
T  33330516 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagct 33330417  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaacc 216  Q
    ||||||| ||  |||||||||| ||||||||||||| ||| ||||  ||||||  |||||||||||| |||||||||||||||||||| ||| |||||||    
T  33330416 ttacacatgacaaaaccctaga-tctaccctttggtattttcccatcctcacactatgaaccctaaatcccaaggtgattacaatgttgttttcccaacc 33330318  T
Q  217 caagagacactctcaacaaag 237  Q
     |||| ||||||||| |||||    
T  33330317 taagaaacactctcatcaaag 33330297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 33336013 - 33335794
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagctt-tcaagct 117  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||||| |||||||    
T  33336013 cagttcagccaatgtgacctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagct 33335914  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaacc 216  Q
    ||||||| ||  |||||||||| ||||||||||||| ||| ||||  ||||||  |||||||||||| |||||||||||||||||||| ||| |||||||    
T  33335913 ttacacatgacaaaaccctaga-tctaccctttggtattttcccatcctcacactatgaaccctaaatcccaaggtgattacaatgttgttttcccaacc 33335815  T
Q  217 caagagacactctcaacaaag 237  Q
     |||| ||||||||| |||||    
T  33335814 taagaaacactctcatcaaag 33335794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 5674853 - 5674685
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagctttcaagc 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||||| |||||    
T  5674853 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcttgcaagc 5674754  T
Q  117 tttacacaag-aacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
     ||||||||| |||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5674753 -ttacacaagaaacaagacctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaa 5674685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 5674633 - 5674557
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  5674633 acccaaggtgattacaatgtttttccc-aacccaagagacactctctacaaagacactcaaccctttggttccctcct 5674557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 185
Target Start/End: Original strand, 22709050 - 22709188
Alignment:
Q  38 ctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaagaacaaaccct 136  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |      || |   |||||| ||||||| ||||||||||||  |||    
T  22709050 ctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaga------aaaa---tagcttgcaagctt-acacaagaacaagtcct 22709139  T
Q  137 agattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    || |||||||| || |||||||||||||||||||| |||||||||||||    
T  22709140 agtttctacccatttgtgtttccccactctcacaatatgaaccctaaaa 22709188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 156
Target Start/End: Complemental strand, 5757553 - 5757425
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaag 126  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||   |||||| ||||| ||| |||||    
T  5757553 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaaatagcttgcaagc-ttatacaag 5757455  T
Q  127 aacaaaccctagattctaccctttggtgtt 156  Q
    |||||  ||||  |||||||| || |||||    
T  5757454 aacaagacctaatttctacccatttgtgtt 5757425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 5572316 - 5572212
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||||||| |||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||   ||||||  |||| ||||||||    
T  5572316 ccaatatgacctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagc-ttacacaa 5572218  T
Q  126 gaacaa 131  Q
    ||||||    
T  5572217 gaacaa 5572212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 10077240 - 10077176
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 91  Q
    ||||| || ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||    
T  10077240 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaa 10077176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 21356058 - 21356132
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 101  Q
    ||||| || |||||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||    
T  21356058 ccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttactaagagttacaaga 21356132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 21801428 - 21801344
Alignment:
Q  20 cagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    |||||||| ||||| || ||||||||||||||| |||||||||||||||||| || ||  ||||||||||||||| |||||||||    
T  21801428 cagttcagtccaatatgacctaatctgggggagcgagcagctctccaatccactaagataaaagtgttacaaaagagttacaaga 21801344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 18232867 - 18232942
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    ||||| || ||||||||||||||||||||| | ||||||| || ||||| |||||||||||||||| |||||||||    
T  18232867 ccaatatgacctaatctgggggagagagcaaccctccaattcactatgatgaaagtgttacaaaagagttacaaga 18232942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 4629966 - 4630040
Alignment:
Q  19 tcagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 91  Q
    ||||||||| ||||| || |||||||| ||| ||||||||||||||||||||| || || |||||||||||||||    
T  4629966 tcagttcagtccaatatgacctaatctagggaagagagcagctctccaatccactaagatgaaagtgttacaaaa 4630040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 22963739 - 22963796
Alignment:
Q  46 ggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    |||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  22963739 ggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 22963796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 23824654 - 23824597
Alignment:
Q  46 ggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    |||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  23824654 ggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 23824597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 31086538 - 31086485
Alignment:
Q  38 ctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaa 90  Q
    ||||||| |||||||||||| |||||||||||| ||||| ||||||||||||||    
T  31086538 ctaatctaggggagagagcaactctccaatccactatgatgaaagtgttacaaa 31086485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 31979546 - 31979610
Alignment:
Q  39 taatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    ||||||||||||||||||||| |||||||||| || || ||||||||| |||||| |||||||||    
T  31979546 taatctgggggagagagcagccctccaatccactaagatgaaagtgttgcaaaagagttacaaga 31979610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 5343495 - 5343527
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggaga 52  Q
    ||||||||||||||||||||||||| |||||||    
T  5343495 cagttcagccaatgtggcctaatctaggggaga 5343527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 22173266 - 22173018
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagctttcaagctt 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  22173266 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctt 22173167  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||||||    
T  22173166 tacacatgaacaaaccctagattctaccctttggtgtttccccactctcctaatatgaaccctaaaacccaaggtgattacaatgttttt-cccaaccca 22173068  T
Q  219 agagacactctcaacaaagacacttaacccattggttccctcctatgcta 268  Q
    |||||||||||||||||||||||| |||||||||||||||| || |||||    
T  22173067 agagacactctcaacaaagacactcaacccattggttccctactttgcta 22173018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 18656449 - 18656664
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagcttt 119  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18656449 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcattcaagcttt 18656548  T
Q  120 acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaacccaa 219  Q
    ||||| |||||||||||||| ||||||||||||| ||| ||||||||||||  || |||||| || ||||||||||||||||||||||| ||||||| ||    
T  18656549 acacatgaacaaaccctaga-tctaccctttggtattttcccactctcacactataaacccttaatcccaaggtgattacaatgttttt-cccaacctaa 18656646  T
Q  220 gagacactctcaacaaag 237  Q
    || ||||||||| |||||    
T  18656647 gaaacactctcatcaaag 18656664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 28503947 - 28503780
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagctttcaagct 117  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  28503947 cagttcagccaatatggcctaatctggggaagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagccttcaagct 28503848  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28503847 ttacacaagaataaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaa 28503780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 2677158 - 2676939
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagctt-tcaagct 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||||| |||||||    
T  2677158 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagct 2677059  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaacc 216  Q
    ||||||| ||  |||||||||| ||||||||||||| ||| ||||  ||||||  |||||||||||| |||||||||||||||||||| ||| |||||||    
T  2677058 ttacacatgacaaaaccctaga-tctaccctttggtattttcccatcctcacactatgaaccctaaatcccaaggtgattacaatgttgttttcccaacc 2676960  T
Q  217 caagagacactctcaacaaag 237  Q
     |||| ||||||||| |||||    
T  2676959 taagaaacactctcatcaaag 2676939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 2673002 - 2672783
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagctt-tcaagct 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||||| |||||||    
T  2673002 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagct 2672903  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaacc 216  Q
    ||||||| ||  |||||||||| ||||||||||||| ||| ||||  ||||||  ||||||| |||| |||||||||||||||||||| ||| |||||||    
T  2672902 ttacacatgacaaaaccctaga-tctaccctttggtattttcccatcctcacactatgaaccttaaatcccaaggtgattacaatgttgttttcccaacc 2672804  T
Q  217 caagagacactctcaacaaag 237  Q
     |||| ||||||||| |||||    
T  2672803 taagaaacactctcatcaaag 2672783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 50 - 185
Target Start/End: Complemental strand, 28501750 - 28501613
Alignment:
Q  50 agagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagctttcaagctttacacaagaacaaaccctagattctaccc 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  28501750 agagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagccttcaagctttacacaagaataaaccctagattctaccc 28501651  T
Q  148 tttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    |||||||||||||||||||||||| |||||||||||||    
T  28501650 tttggtgtttccccactctcacaatatgaaccctaaaa 28501613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 7167258 - 7167425
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagctttcaagc 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||| |||||||    
T  7167258 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc 7167357  T
Q  117 tttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    || |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  7167358 tt-acacaagaacaaaccctagattctaccctttggtatttccccactctcacaatatgaaccctaaaa 7167425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 8512231 - 8512450
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagctt-tcaagct 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||||| |||||||    
T  8512231 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagct 8512330  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaacc 216  Q
    ||||||||||  ||||||||||  ||||||||||||  || ||||  ||||||  ||||||||  || |||||||||||||||||||| ||| |||||||    
T  8512331 ttacacaagacaaaaccctaga-cctaccctttggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacc 8512429  T
Q  217 caagagacactctcaacaaag 237  Q
     |||| ||||||||| |||||    
T  8512430 taagatacactctcatcaaag 8512450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 8517111 - 8517330
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagctt-tcaagct 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||||| |||||||    
T  8517111 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagct 8517210  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaacc 216  Q
    ||||||||||  ||||||||||  ||||||||||||  || ||||  ||||||  ||||||||  || |||||||||||||||||||| ||| |||||||    
T  8517211 ttacacaagacaaaaccctaga-cctaccctttggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacc 8517309  T
Q  217 caagagacactctcaacaaag 237  Q
     |||| ||||||||| |||||    
T  8517310 taagatacactctcatcaaag 8517330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 24968121 - 24968340
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagct-ttcaagct 117  Q
    |||||||||||||||||| |||| | |||||||||| ||||||||||||||||||| ||| |||||||||||| ||||||||| ||||||| ||||||||    
T  24968121 cagttcagccaatgtggcttaattttggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagctattcaagct 24968220  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaacc 216  Q
    ||||||| |||||||||| ||| |||||||||||||  || ||||  ||||||  |||||||||||| |||||||||||||||||||| ||| |||||||    
T  24968221 ttacacatgaacaaacccgaga-tctaccctttggtactttcccatcctcacactatgaaccctaaatcccaaggtgattacaatgttgttttcccaacc 24968319  T
Q  217 caagagacactctcaacaaag 237  Q
     |||| ||||||||| |||||    
T  24968320 taagatacactctcatcaaag 24968340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 40372878 - 40372712
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagct 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    |||||| ||||||    
T  40372878 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagct 40372779  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    | |||||||||||| ||||||||||||||| |  ||||||||||||||||| || |||||||||||||    
T  40372778 t-acacaagaacaagccctagattctacccatatgtgtttccccactctcataatatgaaccctaaaa 40372712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 8739146 - 8738982
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagctttcaagc 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||| |||||||    
T  8739146 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc 8739047  T
Q  117 tttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaacccta 182  Q
     |||||||||||||| ||||||||||||||| |  || ||||||||||||||||| ||||||||||    
T  8739046 -ttacacaagaacaatccctagattctacccatatgtatttccccactctcacaatatgaacccta 8738982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 9091384 - 9091220
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagctttcaagc 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||| |||||||    
T  9091384 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc 9091285  T
Q  117 tttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaacccta 182  Q
     |||||||||||||| ||||||||||||||| |  || ||||||||||||||||| ||||||||||    
T  9091284 -ttacacaagaacaatccctagattctacccatatgtatttccccactctcacaatatgaacccta 9091220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 2671669 - 2671502
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagctttcaagc 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  ||| || |||||    
T  2671669 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagattgcaagc 2671570  T
Q  117 tttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
     |||||||||| ||| ||||||||||||||| |  |||||||||||||||||||| |||||||||||||    
T  2671569 -ttacacaagaccaagccctagattctacccatatgtgtttccccactctcacaatatgaaccctaaaa 2671502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 8477376 - 8477545
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagctttcaagc 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||||| |||||    
T  8477376 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcttgcaagc 8477475  T
Q  117 tttacacaagaa-caaaccctagattctaccctttggtgttt-ccccactctcacaacatgaaccctaaaa 185  Q
    || |||||| || |||  |||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  8477476 tt-acacaataaacaagacctagattctaccctttggtgtttcccccactctcacaatatgaaccctaaaa 8477545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 26928674 - 26928507
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagctttcaagc 116  Q
    ||||||||||||| || ||||||||||||||||||||| |||||||||||| ||||| |||||||||||||| |||||||||  |   |||||| |||||    
T  26928674 cagttcagccaatatgacctaatctgggggagagagcaactctccaatccactatgatgaaagtgttacaaagggttacaagaaaaaatagcttgcaagc 26928575  T
Q  117 tttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
     ||||||||||||||  |||||||||||||| || |||||||||||||||||||| |||||||||||||    
T  26928574 -ttacacaagaacaagacctagattctacccatttgtgtttccccactctcacaatatgaaccctaaaa 26928507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 32475499 - 32475717
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctt-tcaagctt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||  ||||||||| |||||||| ||||||||    
T  32475499 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgt-ttacaaagagttacaagaatctagcttatcaagctt 32475597  T
Q  119 tacacaagaacaaaccctagattctaccctttggt--gtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaac 215  Q
    |||||||||  ||||||||||  |||||||||| |   |||||| || ||||||  ||||||||  || |||||| ||||||||||||| ||| ||||||    
T  32475598 tacacaagacaaaaccctaga-cctaccctttgataaatttcccaac-ctcacactatgaacccataatcccaagatgattacaatgttgttttcccaac 32475695  T
Q  216 ccaagagacactctcaacaaag 237  Q
    | ||||  |||||||| |||||    
T  32475696 ctaagattcactctcatcaaag 32475717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 32480357 - 32480575
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctt-tcaagctt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||  ||||||||| |||||||| ||||||||    
T  32480357 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgt-ttacaaagagttacaagaatctagcttatcaagctt 32480455  T
Q  119 tacacaagaacaaaccctagattctaccctttggt--gtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaac 215  Q
    |||||||||  ||||||||||  |||||||||| |   |||||| || ||||||  ||||||||  || |||||| ||||||||||||| ||| ||||||    
T  32480456 tacacaagacaaaaccctaga-cctaccctttgataaatttcccaac-ctcacactatgaacccataatcccaagatgattacaatgttgttttcccaac 32480553  T
Q  216 ccaagagacactctcaacaaag 237  Q
    | ||||  |||||||| |||||    
T  32480554 ctaagattcactctcatcaaag 32480575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 32143343 - 32143501
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagctttacacaa 125  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    |||||| ||||||| ||||||    
T  32143343 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagctt-acacaa 32143441  T
Q  126 gaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    ||||||  |||||||||||||| || |||||||||||||||| ||| |||||||||||||    
T  32143442 gaacaagacctagattctacccatttgtgtttccccactctctcaatatgaaccctaaaa 32143501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 1305962 - 1306128
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagctttcaagct 117  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||||||||||| || || |||||||||||||| ||||||||| |   ||| || |||||     
T  1305962 cagttcagccaatatggcctaatctaggggagatagcagctctccaatccactacgatgaaagtgttacaaagggttacaagaaaaatagtttgcaagc- 1306060  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    ||||||||||||||  | ||| |||||||| || |||||||||||||||| ||| |||||||||||||    
T  1306061 ttacacaagaacaagtcatagtttctacccatttgtgtttccccactctctcaatatgaaccctaaaa 1306128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 27452980 - 27453138
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagctttacacaa 125  Q
    ||||| || ||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    |||||| ||||||| ||||||    
T  27452980 ccaatatgacctaatccgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagctt-acacaa 27453078  T
Q  126 gaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    ||||||  ||||  |||||||| || |||||||||||||||| ||| |||||||||||||    
T  27453079 gaacaattcctattttctacccatttgtgtttccccactctctcaatatgaaccctaaaa 27453138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 7167478 - 7167555
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  7167478 acccaaggtgattacaatgttttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcct 7167555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 2671449 - 2671373
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  2671449 acccaaggtgattacaatgtttttccc-aacccaagagacactctctacaaagacactcaaccctttggttccctcct 2671373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 8477598 - 8477674
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  8477598 acccaaggtgattacaatgtttttccc-aacccaagagacactctctacaaagacactcaaccctttggttccctcct 8477674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 8738926 - 8738850
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  8738926 acccaaggtgattacaatgtttttccc-aacccaagagatactctctacaaagacactcaacccattggttccctcct 8738850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 40372659 - 40372583
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  40372659 acccaaggtgattacaatgtttttccc-aacccaagagacactctctacaaagacactcaaccctttggttccctcct 40372583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 9091164 - 9091088
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||| ||||| |||||||||||||    
T  9091164 acccaaggtgattacaatgtttttccc-aacccaagagatactctctacaaagacactcaaccctttggttccctcct 9091088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 27975017 - 27974884
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagctttacacaa 125  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    |||||| ||||||| ||||||    
T  27975017 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaaaatagcttgcaagctt-acacaa 27974919  T
Q  126 gaacaaaccctagattctaccctttggtgtttccc 160  Q
    ||||||  ||||  |||||||| || |||||||||    
T  27974918 gaacaagacctaatttctacccatttgtgtttccc 27974884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 28501560 - 28501483
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaaccc-attggttccctcct 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||  |||||||||||||    
T  28501560 acccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcatcccttttggttccctcct 28501483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 28503727 - 28503650
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaaccc-attggttccctcct 262  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||  |||||||||||||    
T  28503727 acccaaggtgattacaatatttttccc-aacccaagagacactctcaacaaagacactcaacccttttggttccctcct 28503650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 183
Target Start/End: Complemental strand, 6794778 - 6794623
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagctttcaagctttacacaa 125  Q
    ||||| || |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||| |   |||||| ||||| ||||||||    
T  6794778 ccaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaaattagcttgcaagc-ttacacaa 6794680  T
Q  126 gaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaa 183  Q
    ||||||  ||||  |||||||| || ||| |  ||||||||||||| |||||||||||    
T  6794679 gaacaagtcctaatttctacccatttgtg-tcacccactctcacaatatgaaccctaa 6794623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 8370551 - 8370448
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaag 126  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||   ||||||  |||| |||||||||    
T  8370551 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaattagcttaaaagc-ttacacaag 8370453  T
Q  127 aacaa 131  Q
    |||||    
T  8370452 aacaa 8370448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 16264372 - 16264475
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaag 126  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||   |||||| ||||| || ||||||    
T  16264372 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaaatagcttgcaagc-ttccacaag 16264470  T
Q  127 aacaa 131  Q
    |||||    
T  16264471 aacaa 16264475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 18552948 - 18552844
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||   ||||||  |||| ||||||||    
T  18552948 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagc-ttacacaa 18552850  T
Q  126 gaacaa 131  Q
    ||||||    
T  18552849 gaacaa 18552844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 36029115 - 36029219
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| |||||||||   |||||| ||| | ||||||||    
T  36029115 ccaatatgacctaatctgggggagaaagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaaac-ttacacaa 36029213  T
Q  126 gaacaa 131  Q
    ||||||    
T  36029214 gaacaa 36029219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 1736370 - 1736295
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    ||||| || ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  1736370 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 1736295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 48438236 - 48438311
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    ||||| || ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  48438236 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 48438311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 21711245 - 21711319
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 101  Q
    ||||| || ||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||  |||||||||    
T  21711245 ccaatatgacctaatctgggggagagagcagctctcaaatccactatgatgaaagtgttacaaagagttacaaga 21711319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 27986511 - 27986449
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 89  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  27986511 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 27986449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 33386731 - 33386669
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 89  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  33386731 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 33386669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 40592847 - 40592742
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || ||||||||| ||||||||| |||||||||||| | ||||| |||||||||||||||| |||||||||   |||||| ||||| ||||||||    
T  40592847 ccaatatgacctaatctgtgggagagagaagctctccaatcgactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagc-ttacacaa 40592749  T
Q  126 gaacaaa 132  Q
    |||||||    
T  40592748 gaacaaa 40592742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 30709855 - 30709780
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    ||||| || ||||||||||||||||||||||| |||||||||| ||||| |||| ||||||||||| |||||||||    
T  30709855 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaattgttacaaaagagttacaaga 30709780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 3716067 - 3715963
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||||||| || |||||||||||||||||||| | ||||| |||||||||||||||| |||||||||   |||||| ||| | ||||||||    
T  3716067 ccaatatgacctaatctaggagagagagcagctctccaatctactatgatgaaagtgttacaaaagagttacaagaaattagcttacaaac-ttacacaa 3715969  T
Q  126 gaacaa 131  Q
    ||||||    
T  3715968 gaacaa 3715963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 26299021 - 26299085
Alignment:
Q  39 taatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    ||||||||||||||||||||| |||||||| | ||||| |||||||||||||||| |||||||||    
T  26299021 taatctgggggagagagcagccctccaatctactatgatgaaagtgttacaaaagagttacaaga 26299085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 10207948 - 10207983
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagag 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  10207948 cagttcagccaatgtggcctaatctgggggagagag 10207983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 25795803 - 25795878
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    ||||| || |||||||||||||||||||||||||||||||| | || || ||||||||||| |||| |||||||||    
T  25795803 ccaatatgacctaatctgggggagagagcagctctccaatctactaagatgaaagtgttacgaaagagttacaaga 25795878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 40844674 - 40844777
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||||||||||| |||||||||| ||| |||||| ||||| |||||||||||||||| |||||||||   ||||||  |||| ||||||||    
T  40844674 ccaatatgacctaatctgggg-agagagcagccctcaaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagc-ttacacaa 40844771  T
Q  126 gaacaa 131  Q
    ||||||    
T  40844772 gaacaa 40844777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 4386983 - 4386947
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaata 73  Q
    |||| ||||||||||||||||||||||||||||||||    
T  4386983 cctactctgggggagagagcagctctccaatccaata 4386947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 1417555 - 1417493
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatg-agaaagtgttacaa 89  Q
    ||||| || ||||||||||||||||||||| | |||||||||| || | ||||||||||||||    
T  1417555 ccaatatgacctaatctgggggagagagcatccctccaatccactaagaagaaagtgttacaa 1417493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 37466313 - 37466375
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 89  Q
    ||||| || ||||||||||||||||||| ||| |||||||||| || || |||||||||||||    
T  37466313 ccaatatgacctaatctgggggagagagtagccctccaatccactaagatgaaagtgttacaa 37466375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 39040057 - 39039995
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 89  Q
    ||||| || |||||||||||| ||||| || |||||||||||| ||||| |||||||||||||    
T  39040057 ccaatatgacctaatctggggaagagaacaactctccaatccactatgatgaaagtgttacaa 39039995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 242
Target Start/End: Original strand, 1306179 - 1306235
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacact 242  Q
    |||||||||| ||||||||||||| ||||||||||||||  ||| | |||||||||||    
T  1306179 acccaaggtgtttacaatgttttt-cccaacccaagagatcctcactacaaagacact 1306235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 53894082 - 53894119
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatat 74  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  53894082 cctagtctgggggagagagcagccctccaatccaatat 53894119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 20 - 262
Target Start/End: Original strand, 51520471 - 51520713
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagctttcaagctt 118  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  51520471 cagttctgccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctt 51520570  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||||||    
T  51520571 tacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgttttt-cccaaccca 51520669  T
Q  219 agagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  51520670 agagacactctcaacaaagacactcaacccattggttccctcct 51520713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 9224478 - 9224230
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagctttcaagctt 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||    
T  9224478 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttagaagaactctagccttcaagctt 9224379  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||| ||||||    
T  9224378 tacacatgaacaaaccctagactctaccctttggtgtttccccactctcacactatgaaccctaaaacccaaggtgattacaatg-ttttcccaaaccca 9224280  T
Q  219 agagacactctcaacaaagacacttaacccattggttccctcctatgcta 268  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  9224279 agagacactctcaacaaagacactcaacccattggttccctcctttgcta 9224230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 9229265 - 9229017
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagctttcaagctt 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||    
T  9229265 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttagaagaactctagccttcaagctt 9229166  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||| ||||||    
T  9229165 tacacatgaacaaaccctagactctaccctttggtgtttccccactctcacactatgaaccctaaaacccaaggtgattacaatg-ttttcccaaaccca 9229067  T
Q  219 agagacactctcaacaaagacacttaacccattggttccctcctatgcta 268  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  9229066 agagacactctcaacaaagacactcaacccattggttccctcctttgcta 9229017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 20 - 262
Target Start/End: Original strand, 3814038 - 3814278
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagcttt 119  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3814038 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagactctagctttcaagcttt 3814137  T
Q  120 acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaacccaa 219  Q
    ||||| |||||||||||||| ||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||| ||    
T  3814138 acacatgaacaaaccctaga-tctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttttt-cccaacctaa 3814235  T
Q  220 gagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    || ||||||||| |||||||||  | ||||| || ||||||||    
T  3814236 gaaacactctcatcaaagacacacaccccataggatccctcct 3814278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 45357367 - 45357151
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagcttt 119  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45357367 cagttcagccaatatggcataatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagcttt 45357268  T
Q  120 acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaacccaa 219  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| ||    
T  45357267 acacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaccccaaggtgattacaatgttttt-cccaacctaa 45357169  T
Q  220 gagacactctcaacaaag 237  Q
    || || |||||| |||||    
T  45357168 gaaactctctcatcaaag 45357151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 45347888 - 45347671
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagac-tctagctttcaagctt 118  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  45347888 cagttcagccaatatggcttaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagacctctagccttcaagctt 45347789  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| |||||||||||||||||||||||||||| ||| ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| |    
T  45347788 tacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaccccaaggtgattacaatgttttt-cccaaccta 45347690  T
Q  219 agagacactctcaacaaag 237  Q
    ||||||||||||| |||||    
T  45347689 agagacactctcatcaaag 45347671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 5732679 - 5732894
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagcttt 119  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5732679 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagcttt 5732778  T
Q  120 acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaacccaa 219  Q
    ||||| |||||||||||||| ||||||||||||| ||| ||||||||||||  || |||||| || ||||||||||||||||||||||| ||||||| ||    
T  5732779 acacatgaacaaaccctaga-tctaccctttggtattttcccactctcacactataaacccttaatcccaaggtgattacaatgttttt-cccaacctaa 5732876  T
Q  220 gagacactctcaacaaag 237  Q
    || ||||||||| |||||    
T  5732877 gaaacactctcatcaaag 5732894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 18855741 - 18855956
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctt-tcaagctt 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||    
T  18855741 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaagactctagcttatcaagctt 18855839  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| ||||||||||||||  |||||||||||| ||| ||||||||||||  ||||||||  || ||||||||||||||||||||||| ||||||| |    
T  18855840 tacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaacccacaatcccaaggtgattacaatgttttt-cccaaccta 18855937  T
Q  219 agagacactctcaacaaag 237  Q
    ||| || |||||| |||||    
T  18855938 agaaactctctcatcaaag 18855956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 24741954 - 24742121
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagctttcaagc 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||| |||||||    
T  24741954 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc 24742053  T
Q  117 tttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24742054 tt-acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaa 24742121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 56146782 - 56146664
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagctttcaagctt 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  56146782 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctt 56146683  T
Q  119 tacacaagaacaaacccta 137  Q
    |||||| ||||||||||||    
T  56146682 tacacatgaacaaacccta 56146664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 29760655 - 29760821
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagctttcaagc 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||| | |||||    
T  29760655 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcctgcaagc 29760754  T
Q  117 tttacacaag-aacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaa 183  Q
     ||||||||| |||||  |||||||||||||||||||||||||||||||||||||  |||||||||||    
T  29760755 -ttacacaagaaacaagacctagattctaccctttggtgtttccccactctcacactatgaaccctaa 29760821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 179 - 268
Target Start/End: Complemental strand, 18712677 - 18712589
Alignment:
Q  179 cctaaaacccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcctatgcta 268  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  18712677 cctaaaacccaaggtgataacaatgtttttccc-aacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 18712589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 29760874 - 29760951
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  29760874 acccaaggtgattacaatgttttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcct 29760951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 24742174 - 24742250
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  24742174 acccaaggtgattacaatgtttttccc-aacccaagagacactctctacaaagacactcaaccctttggttccctcct 24742250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 31985708 - 31985552
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagctttacacaa 125  Q
    ||||| || |||||||||||| ||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    |||||| ||||||| ||||||    
T  31985708 ccaatatgacctaatctgggg-agagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagctt-acacaa 31985611  T
Q  126 gaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    ||||||  ||||  |||||||| || ||||||||| ||||||||||  ||||||||||||    
T  31985610 gaacaagtcctaatttctacccatttgtgtttccc-actctcacaatgtgaaccctaaaa 31985552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 28468612 - 28468455
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctt 118  Q
    ||||||||||||| || |||||||||| ||||||||||||||||||||||| ||||| ||||||||||||| |    | ||     ||| || ||||| |    
T  28468612 cagttcagccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttacaaga----aaaa----atagtttgcaagc-t 28468522  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    ||||||| |||||  |||||||||||||| || |||||||||||||||| ||| |||||||||||||    
T  28468521 tacacaataacaagacctagattctacccatttgtgtttccccactctctcaatatgaaccctaaaa 28468455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 36315304 - 36315230
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 101  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  36315304 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 36315230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 36329513 - 36329439
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 101  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  36329513 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 36329439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 156
Target Start/End: Complemental strand, 5396746 - 5396618
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaag 126  Q
    ||||| || |||||||||| ||||||||||||||||||||||| ||||| ||||||||| ||||  |||||||||   |||||| ||||| |||||||||    
T  5396746 ccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttgcaaagagttacaagaaaatagcttgcaagc-ttacacaag 5396648  T
Q  127 aacaaaccctagattctaccctttggtgtt 156  Q
    |||||  ||||  |||||||| || |||||    
T  5396647 aacaagacctaatttctacccatttgtgtt 5396618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 10047401 - 10047505
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||   ||||||  |||| ||||||||    
T  10047401 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagc-ttacacaa 10047499  T
Q  126 gaacaa 131  Q
    ||||||    
T  10047500 gaacaa 10047505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 39246016 - 39246091
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    ||||| || ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  39246016 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 39246091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 16623359 - 16623293
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    |||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  16623359 cctaatctggaggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 16623293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 5143281 - 5143345
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 91  Q
    ||||| || |||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||    
T  5143281 ccaatatgacctaatctgggggagagagcagctctccaacccactatgatgaaagtgttacaaaa 5143345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 184
Target Start/End: Original strand, 5147699 - 5147856
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa-ggttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||||| |||||||| ||||||||||||| |||| ||||| |||||||||||||||  |||||||||   |||||| ||||| ||||||||    
T  5147699 ccaatatgacctaatttgggggagggagcagctctccagtccattatgatgaaagtgttacaaaatagttacaagaaaatagcttgcaagc-ttacacaa 5147797  T
Q  126 gaacaaaccctagattctaccc-tttggtgtttccccactctcacaacatgaaccctaaa 184  Q
    ||||||  ||||  |||||||| ||| ||| |  |||| |||||||| ||||||||||||    
T  5147798 gaacaaggcctaatttctacccattttgtg-tcacccattctcacaatatgaaccctaaa 5147856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 5269266 - 5269204
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 89  Q
    ||||| || ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||    
T  5269266 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaa 5269204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 131
Target Start/End: Complemental strand, 16630744 - 16630651
Alignment:
Q  39 taatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaagaacaa 131  Q
    |||||||| ||||||| ||||||||||||||| ||||| |||||||||||||||| |||||||||   ||||||  |||| ||||||||||||||    
T  16630744 taatctggaggagagaacagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagc-ttacacaagaacaa 16630651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 38152503 - 38152449
Alignment:
Q  39 taatctgggggagagagcagctctccaatccaatat-gagaaagtgttacaaaag 92  Q
    |||||||||||||||||||||||||||||||| ||| | ||||||||||||||||    
T  38152503 taatctgggggagagagcagctctccaatccactatggtgaaagtgttacaaaag 38152449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 3796594 - 3796490
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||||| |||||||||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||   |||||| ||||| || |||||    
T  3796594 ccaatatgacctaatatgggggagagagcaactctctaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagc-ttgcacaa 3796496  T
Q  126 gaacaa 131  Q
    ||||||    
T  3796495 gaacaa 3796490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 24333831 - 24333896
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 92  Q
    ||||| || |||||| ||||||||||||||||||||||||||| ||||| ||| ||||||||||||    
T  24333831 ccaatatgacctaatttgggggagagagcagctctccaatccactatgatgaacgtgttacaaaag 24333896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 3777580 - 3777674
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaagaacaa 131  Q
    |||||||| | |||||||| |||||||||||||| ||||| ||||||||||||||  |||||||||   |||||| ||| | ||||||||||||||    
T  3777580 cctaatctagaggagagagtagctctccaatccactatgatgaaagtgttacaaagagttacaagaaaatagcttgcaaac-ttacacaagaacaa 3777674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 6743490 - 6743425
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 92  Q
    ||||| || ||||||||  ||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  6743490 ccaatatgacctaatctacgggagagagcagccctccaatccactatgatgaaagtgttacaaaag 6743425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 28468404 - 28468342
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaaccc 248  Q
    |||||||||| ||||||| |||||||| |||||||||||  ||| | |||||||||||||||||    
T  28468404 acccaaggtgtttacaatatttttccc-aacccaagagatcctcactacaaagacacttaaccc 28468342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 35133 - 34885
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagctttcaagctt 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||    
T  35133 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttagaagaactctagccttcaagctt 35034  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||| ||||||    
T  35033 tacacatgaacaaaccctagactctaccctttggtgtttccccactctcacactatgaaccctaaaacccaaggtgattacaatg-ttttcccaaaccca 34935  T
Q  219 agagacactctcaacaaagacacttaacccattggttccctcctatgcta 268  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  34934 agagacactctcaacaaagacactcaacccattggttccctcctttgcta 34885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 12396925 - 12397173
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagctttcaagctt 118  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || |||    
T  12396925 cagttcagccaatatggcctaatctgggggagagaacagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagcctttaatctt 12397024  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  12397025 tacacatgaacaaaccctagattctaccctttggtgtttccccactatcacaatatgaaccctaaaacccaaggtgattacaatgttttt-cccaaccca 12397123  T
Q  219 agagacactctcaacaaagacacttaacccattggttccctcctatgcta 268  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  12397124 agagacactctcaacaaagacactcaacccattggttccctcctttgcta 12397173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 20 - 260
Target Start/End: Original strand, 12406345 - 12406585
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagctttcaagctt 118  Q
    ||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  12406345 cagttcagccaatatggcctaatctgggggagagaatagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctt 12406444  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||    
T  12406445 tacacatgaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaagccaaggtgattacaatgttttt-cccaaccca 12406543  T
Q  219 agagacactctcaacaaagacacttaacccattggttccctc 260  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  12406544 agagacactctcaacaaagacactcaacccattggttccctc 12406585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 24024397 - 24024150
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagcttt 119  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  24024397 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaatgttacaagactctagccttcaagcttt 24024298  T
Q  120 acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaacccaa 219  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||||||||||  ||||||||||||||||| |||||||||||||||||| || |||||||    
T  24024297 acacatgaacaaaccctagattctaccctttggtattttcccactctcacacgatgaaccctaaaacccacggtgattacaatgttttt-ccaaacccaa 24024199  T
Q  220 gagacactctcaacaaagacacttaacccattggttccctcctatgcta 268  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  24024198 gagacactctcaacaaagacactcaacccattggttccctcctttgcta 24024150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 31109654 - 31109406
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagcttt 119  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31109654 cagttcagccaatatggcctaatctaggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagcttt 31109555  T
Q  120 acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaacccaa 219  Q
     |||| |||||||||||||||||||||||||| | ||| ||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||    
T  31109554 gcacatgaacaaaccctagattctaccctttgatattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttttt-cccaacccaa 31109456  T
Q  220 gagacactctcaacaaagacacttaacccat-tggttccctcctatgcta 268  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| |||||    
T  31109455 gagacactctcaacaaagacactcaacccatatggttccctcctttgcta 31109406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 19992327 - 19992544
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctt-tcaagctt 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  19992327 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagactctagcttatcaagctt 19992426  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| ||||||||||||||  |||||||||||| ||| ||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||| |    
T  19992427 tacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgtttttccccaaccta 19992525  T
Q  219 agagacactctcaacaaag 237  Q
    ||| |||||| || |||||    
T  19992526 agaaacactcacatcaaag 19992544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 21812309 - 21812092
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctt-tcaa-gct 117  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| || |||||||||||| |||||||||||||| |||| |||    
T  21812309 cagttcagccaatgtggcctaatctgggggagagagcagctttccaatccaatatgtgaa-gtcttacaaaaggttccaagactctagcttgtcaaagct 21812211  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccc 217  Q
    ||||||| ||||||||||||||| |||||||||||| ||| ||||||||||||  ||||||||  || |||||||||||||||||||||||||||||||     
T  21812210 ttacacatgaacaaaccctagat-ctaccctttggtattttcccactctcacactatgaacccataatcccaaggtgattacaatgtttttccccaacct 21812112  T
Q  218 aagagacactctcaacaaag 237  Q
    |||| ||||||||| |||||    
T  21812111 aagaaacactctcatcaaag 21812092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 20357630 - 20357463
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagctttcaagct 117  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||  |||| ||||||||    
T  20357630 cagttcagccaatatggcctaatttgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaacaatagccttcaagct 20357531  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    |||||||||||||  ||||||||||||||| |  |||||||||||||||||||| |||||||||||||    
T  20357530 ttacacaagaacatgccctagattctacccatatgtgtttccccactctcacaatatgaaccctaaaa 20357463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 24266273 - 24266054
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagctt-tcaagct 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||||| |||||||    
T  24266273 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagct 24266174  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaacc 216  Q
    ||||||||||  ||||||||||  ||||||||||||  || ||||  ||||||  ||||||||  || |||||||||||||||||||| ||| |||||||    
T  24266173 ttacacaagacaaaaccctaga-cctaccctttggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacc 24266075  T
Q  217 caagagacactctcaacaaag 237  Q
     |||| ||||||||| |||||    
T  24266074 taagatacactctcatcaaag 24266054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 24261394 - 24261175
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagctt-tcaagct 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||||| |||||||    
T  24261394 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagct 24261295  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaacc 216  Q
    ||||||||||  ||||||||||  ||||||||||||  || ||||  ||||||  ||||||||  || |||||| ||||||||||||| ||| |||||||    
T  24261294 ttacacaagacaaaaccctaga-cctaccctttggtaatttcccaacctcacactatgaacccataatcccaagatgattacaatgttgttttcccaacc 24261196  T
Q  217 caagagacactctcaacaaag 237  Q
     ||||  |||||||| |||||    
T  24261195 taagattcactctcatcaaag 24261175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 2057979 - 2058147
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagctttcaagc 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||| |||||||    
T  2057979 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcattcaagc 2058078  T
Q  117 tttacacaagaacaaaccctagattctaccc-tttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
     |||||||||||||| ||||||||||||||| | || ||||||||||||||||||| |||||||||||||    
T  2058079 -ttacacaagaacaagccctagattctacccatatgttgtttccccactctcacaatatgaaccctaaaa 2058147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 1533527 - 1533359
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagctttcaagc 116  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||  ||  |||||| |||||    
T  1533527 cagttcagccaatatggcctaatctgggggagagagcatctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcttgcaagc 1533428  T
Q  117 tttacacaag-aacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
     ||||||||| |||||  |||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  1533427 -ttacacaagaaacaagacctagattctaccctttggtgttttcccactctcacaatatgaaccctaaaa 1533359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 21639822 - 21639988
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagct 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| ||||||||||    |||||| ||||||    
T  21639822 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccactataatgaaagtgttacaaagggttacaagaaaaatagcttgcaagct 21639921  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    | ||||||||||||  |||||||||||||| || |||||||||||||||||||| |||||||||||||    
T  21639922 t-acacaagaacaagacctagattctacccatttgtgtttccccactctcacaatatgaaccctaaaa 21639988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 18408777 - 18408943
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagctttcaagct 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   || ||| |||||     
T  18408777 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccagtatgatgaaagtgttacaaagggttacaagaaaaataacttgcaagc- 18408875  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    ||||||||||||||  ||||| |||||||| || |||||||||||||||||||| |||||||||||||    
T  18408876 ttacacaagaacaagtcctagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaa 18408943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 16884943 - 16885162
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctt-tcaagctt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||  ||||||||| |||||||| ||||||||    
T  16884943 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgttttacaaagagttacaagaatctagcttatcaagctt 16885042  T
Q  119 tacacaagaacaaaccctagattctaccctttggt--gtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaac 215  Q
    |||||||||  ||||||||||  |||||||||| |   |||||| || ||||||  ||||||||  || |||||| ||||||||||||| ||| ||||||    
T  16885043 tacacaagacaaaaccctaga-cctaccctttgataaatttcccaac-ctcacactatgaacccataatcccaagatgattacaatgttgttttcccaac 16885140  T
Q  216 ccaagagacactctcaacaaag 237  Q
    | ||||  |||||||| |||||    
T  16885141 ctaagattcactctcatcaaag 16885162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 21646020 - 21646186
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagct 117  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||||||||||| ||||| |||||||||| ||| ||||||||||    |||||| ||||||    
T  21646020 cagttcagccaatatggcctaatctagggaagagagcagctctccaatccactatgatgaaagtgttaaaaagggttacaagaaaaatagcttgcaagct 21646119  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    | ||||||||||||  |||||||||||||| || |||||||||||||||||||| |||||||||||||    
T  21646120 t-acacaagaacaagacctagattctacccatttgtgtttccccactctcacaatatgaaccctaaaa 21646186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 16880087 - 16880306
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctt-tcaagctt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||  ||||||||| |||||||| ||||||||    
T  16880087 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgttttacaaagagttacaagaatctagcttatcaagctt 16880186  T
Q  119 tacacaagaacaaaccctagattctaccctttggt--gtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaac 215  Q
    |||||||||  ||||||||||  |||||||||| |   |||||| || ||||||  ||||||||  || |||||| ||||||||||||| |||  |||||    
T  16880187 tacacaagacaaaaccctaga-cctaccctttgataaatttcccaac-ctcacactatgaacccataatcccaagatgattacaatgttgtttttccaac 16880284  T
Q  216 ccaagagacactctcaacaaag 237  Q
    | ||||  |||||||| |||||    
T  16880285 ctaagattcactctcatcaaag 16880306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 18413654 - 18413819
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagctttcaagct 117  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   ||| || |||||     
T  18413654 cagttcagccaatatggcctaatctgggg-agagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagattgcaagc- 18413751  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    ||||||||||||||  ||||| |||||||| || |||||||||||||||||||| |||||||||||||    
T  18413752 ttacacaagaacaagtcctagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaa 18413819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 4866744 - 4866820
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggtta 96  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4866744 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggtta 4866820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 187 - 262
Target Start/End: Original strand, 4873310 - 4873384
Alignment:
Q  187 ccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4873310 ccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaacccattggttccctcct 4873384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 20357410 - 20357334
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  20357410 acccaaggtgattacaatgtttttccc-aacccaagagacactctcaacaaagacactcaaccctttggttccctcct 20357334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 1533307 - 1533231
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  1533307 acccaaggtgattacaatgtttttccc-aacccaagagacactctctacaaagacactcaaccctttggttccctcct 1533231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 2058202 - 2058278
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  2058202 acccaaggtgattacaatgtttttccc-aacccaagagacactctctacaaagacactcaaccctttggttccctcct 2058278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 183
Target Start/End: Original strand, 29159825 - 29159982
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||   |||||| ||||| ||||||||    
T  29159825 ccaatatgacctaatctaggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagc-ttacacaa 29159923  T
Q  126 gaacaaaccctagattctaccctttggtgtttc-cccactctcacaacatgaaccctaa 183  Q
    ||||||  ||||  |||||||| ||  ||| || ||||||||||||| ||||| |||||    
T  29159924 gaacaagacctaatttctacccatttttgtgtcacccactctcacaatatgaatcctaa 29159982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 184
Target Start/End: Original strand, 21983306 - 21983464
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa--ggttacaagactctagctttcaagctttacaca 124  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||   |||||||||   |||||| ||||| |||||||    
T  21983306 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaaagagttacaagaaaatagcttgcaagc-ttacaca 21983404  T
Q  125 agaacaaaccctagattctaccc-tttggtgtttccccactctcacaacatgaaccctaaa 184  Q
    |||||||  ||||| |||||||| ||| ||| |  |||||||||| || ||||||||||||    
T  21983405 agaacaagacctagtttctacccattttgtg-tcacccactctcaaaatatgaaccctaaa 21983464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 2580412 - 2580531
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaag 126  Q
    ||||| || |||| ||||||||||||||||||||||||||||| || || |||||||||||||   |||||||||   |||||| ||||| |||||||||    
T  2580412 ccaatatgacctagtctgggggagagagcagctctccaatccactaagatgaaagtgttacaatgagttacaagaaaatagcttgcaagc-ttacacaag 2580510  T
Q  127 aacaaaccctagattctaccc 147  Q
    |||||  ||||| ||||||||    
T  2580511 aacaagtcctagtttctaccc 2580531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 44848750 - 44848627
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaagaacaaaccc 135  Q
    ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    ||||| ||||| ||||||||||| ||  ||    
T  44848750 cctaacctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaaaaagcttgcaagc-ttacacaagaataagacc 44848652  T
Q  136 tagattctaccctttggtgtttccc 160  Q
    ||  |||||||| || |||||||||    
T  44848651 taatttctacccatttgtgtttccc 44848627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 2647771 - 2647667
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||| |||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||   ||||||  |||| ||||||||    
T  2647771 ccaatatgacctattctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagc-ttacacaa 2647673  T
Q  126 gaacaa 131  Q
    ||||||    
T  2647672 gaacaa 2647667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 46516385 - 46516281
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||||||| |||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||   ||||||  |||| ||||||||    
T  46516385 ccaatatgacctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttaaaagc-ttacacaa 46516287  T
Q  126 gaacaa 131  Q
    ||||||    
T  46516286 gaacaa 46516281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 49091683 - 49091758
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    ||||| || |||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||| |||||||||    
T  49091683 ccaatatgacctaatctggggaagagagcaactctccaatccactatgatgaaagtgttacaaaagagttacaaga 49091758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 33332516 - 33332450
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    ||||||||||||||||||||||| |||||||||| || || |||||||||||||||| |||||||||    
T  33332516 cctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaaaagagttacaaga 33332450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 55970 - 56073
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||||||||||| |||||||||| |||||||||| ||||| |||||||||||||||| |||||||||   ||||||  |||| ||||||||    
T  55970 ccaatatgacctaatctgggg-agagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagc-ttacacaa 56067  T
Q  126 gaacaa 131  Q
    ||||||    
T  56068 gaacaa 56073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 20284111 - 20284233
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaag 126  Q
    ||||| || ||||||||||||||||||||||| |||||||||| || || |||||||||||||   |||||||||   ||||||  |||| ||||| |||    
T  20284111 ccaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaatgcgttacaagaaattagcttataagc-ttacaaaag 20284209  T
Q  127 aacaaaccctagattctacccttt 150  Q
    |||||  ||||  |||||||||||    
T  20284210 aacaagtcctaatttctacccttt 20284233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 21640039 - 21640101
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaaccc 248  Q
    |||||||||| |||||||||||||||| |||||||||||  ||||| ||||||||||| |||||    
T  21640039 acccaaggtgtttacaatgtttttccc-aacccaagagatcctctctacaaagacactcaaccc 21640101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 21646237 - 21646299
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaaccc 248  Q
    |||||||||| |||||||||||||||| |||||||||||  ||||| ||||||||||| |||||    
T  21646237 acccaaggtgtttacaatgtttttccc-aacccaagagatcctctctacaaagacactcaaccc 21646299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 9190083 - 9190021
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 89  Q
    ||||| || |||| ||||||||||||||||||||||||||||| || || |||||||||||||    
T  9190083 ccaatatgacctagtctgggggagagagcagctctccaatccactaagatgaaagtgttacaa 9190021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 35960847 - 35960901
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaa 90  Q
    ||||||||||||||||||||||| |||||| ||| ||||| ||||||||||||||    
T  35960847 cctaatctgggggagagagcagccctccaaaccactatgatgaaagtgttacaaa 35960901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 184
Target Start/End: Original strand, 2479368 - 2479514
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaagaacaaaccc 135  Q
    |||||||| |||| ||||||||||||| |||||| ||||| ||||||||||||||  |||| ||||   |||||| ||||| ||||||||||||||  ||    
T  2479368 cctaatctagggg-gagagcagctctcaaatccactatgatgaaagtgttacaaagagttataagaaaatagcttgcaagc-ttacacaagaacaagacc 2479465  T
Q  136 tagattctaccctttggtgtttccccactctcacaa-catgaaccctaaa 184  Q
    ||  |||||||| |  |||||| ||||||||| |||  ||||||||||||    
T  2479466 taatttctacccatgtgtgttt-cccactctctcaataatgaaccctaaa 2479514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 4796733 - 4796638
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaagaacaa 131  Q
    |||||||||||||||| |||||| ||| |||||| ||||| |||| ||||||||||| |||||||||   ||||||  |||| ||||||||||||||    
T  4796733 cctaatctgggggagaaagcagccctcaaatccactatgatgaaattgttacaaaagagttacaagaaattagcttataagc-ttacacaagaacaa 4796638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 18408993 - 18409055
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaaccc 248  Q
    |||||||||| ||||||||||||| ||||||||||||||  ||| | ||||||||||| |||||    
T  18408993 acccaaggtgtttacaatgttttt-cccaacccaagagatcctcactacaaagacactcaaccc 18409055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 28617300 - 28617258
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatcca 70  Q
    ||||| || |||| |||||||||||||||||||||||||||||    
T  28617300 ccaatatgacctactctgggggagagagcagctctccaatcca 28617258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 9185231 - 9185178
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 89  Q
    |||| |||||||||||||| |||||||||||||| || || |||||||||||||    
T  9185231 cctagtctgggggagagagaagctctccaatccactaagatgaaagtgttacaa 9185178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 24 - 268
Target Start/End: Original strand, 41398254 - 41398498
Alignment:
Q  24 tcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagctttacac 123  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41398254 tcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacac 41398353  T
Q  124 aagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaacccaagaga 223  Q
    | |||||||||||||||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41398354 atgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttttt-cccaacccaagaga 41398452  T
Q  224 cactctcaacaaagacacttaaccca-ttggttccctcctatgcta 268  Q
    ||||||||||||||||||| |||||| ||||||||||||| |||||    
T  41398453 cactctcaacaaagacactcaacccatttggttccctcctttgcta 41398498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 24 - 268
Target Start/End: Original strand, 41390599 - 41390843
Alignment:
Q  24 tcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagctttacac 123  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41390599 tcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagctttacac 41390698  T
Q  124 aagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaacccaagaga 223  Q
    | |||||||||||||||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41390699 atgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttttt-cccaacccaagaga 41390797  T
Q  224 cactctcaacaaagacacttaaccca-ttggttccctcctatgcta 268  Q
    ||||||||||||||||||| || ||| ||||||||||||| |||||    
T  41390798 cactctcaacaaagacactcaatccatttggttccctcctttgcta 41390843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 25445160 - 25444944
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctt-tcaagctt 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25445160 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagcttatcaagctt 25445061  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| ||||||||||||||  |||||||||||| ||| ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| |    
T  25445060 tacacatgaacaaaccctaga-gctaccctttggtattttcccactctcacactatgaaccctaaatcccaaggtgattacaatgttttt-cccaaccta 25444963  T
Q  219 agagacactctcaacaaag 237  Q
    ||| || |||||| |||||    
T  25444962 agaaactctctcatcaaag 25444944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 39445514 - 39445729
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctt-tcaagctt 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||    
T  39445514 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaagactctagcttatcaagctt 39445612  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| ||||||||||||||  |||||||||||| ||| ||||||||||||  |||||||| ||| ||||||||||||||||||||||| ||||||| |    
T  39445613 tacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgttttt-cccaaccta 39445710  T
Q  219 agagacactctcaacaaag 237  Q
    ||| || |||||| |||||    
T  39445711 agaaactctctcatcaaag 39445729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 44023944 - 44023729
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctt-tcaagctt 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||    
T  44023944 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaagactctagcttgtcaagctt 44023846  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| ||||||||||||||  |||||||||||| ||| ||||||||||||  |||||||| ||| ||||||||||||||||||||||| ||||||| |    
T  44023845 tacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgttttt-cccaaccta 44023748  T
Q  219 agagacactctcaacaaag 237  Q
    ||| || |||||| |||||    
T  44023747 agaaactctctcatcaaag 44023729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 1055082 - 1054867
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctt-tcaagctt 118  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||    
T  1055082 cagttcagccaatatggcctaatctgggggagagagcaactctccaatccaatatgtg-aagtgttacaaaaggttacaagactctagcttatcaagctt 1054984  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| ||||||||||||||  |||||||||||| ||| ||||||||||||  |||||||| ||| ||||||||||||||||||||||| ||||||| |    
T  1054983 tacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgttttt-cccaaccta 1054886  T
Q  219 agagacactctcaacaaag 237  Q
    ||| || |||||| |||||    
T  1054885 agaaactctctcatcaaag 1054867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 24787447 - 24787280
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagctttcaagct 117  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||  ||  |||| |||||||     
T  24787447 cagttcagccaatatggcctaatctgggggggagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaacaatagccttcaagca 24787348  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  24787347 ttacacaagaacaaatcctagattctaccctttggtgtttcccaactctcacaatatgaaccctaaaa 24787280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 43988535 - 43988314
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagctt-tcaagct 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||||| |||||||    
T  43988535 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagct 43988436  T
Q  118 ttacacaag--aacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaa 214  Q
    |||||||||  || |||||||||| ||||||||||||  ||| ||||  ||||||  ||||||||  || |||||||||||||||||||| ||| |||||    
T  43988435 ttacacaagacaaaaaaccctaga-tctaccctttggcattttcccatcctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaa 43988337  T
Q  215 cccaagagacactctcaacaaag 237  Q
    || |||| ||||||||| |||||    
T  43988336 cctaagaaacactctcatcaaag 43988314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 24202852 - 24202686
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagct 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    |||||| ||||||    
T  24202852 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagct 24202753  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    | ||||||||||||  |||||||||||||| || |||||||||||||||||||| |||||||||||||    
T  24202752 t-acacaagaacaagacctagattctacccatttgtgtttccccactctcacaatatgaaccctaaaa 24202686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 19358926 - 19358760
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagct 117  Q
    |||||||| |||| || |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    |||||| ||||||    
T  19358926 cagttcagtcaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagct 19358827  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    | ||||||||||||  |||||||||||||| || |||||||||||||||| ||| |||||||||||||    
T  19358826 t-acacaagaacaagacctagattctacccatttgtgtttccccactctctcaatatgaaccctaaaa 19358760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 19361515 - 19361349
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagctttcaagct 117  Q
    |||||||| |||| || |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   ||| || |||||     
T  19361515 cagttcagtcaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagtttgcaagc- 19361417  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    ||||||||||||||  |||||||||||||| || |||||||||||||||| ||| |||||||||||||    
T  19361416 ttacacaagaacaagacctagattctacccatttgtgtttccccactctctcaatatgaaccctaaaa 19361349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 19380155 - 19379989
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagctttcaagct 117  Q
    |||||||| |||| || |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   ||| || |||||     
T  19380155 cagttcagtcaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagtttgcaagc- 19380057  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    ||||||||||||||  |||||||||||||| || |||||||||||||||| ||| |||||||||||||    
T  19380056 ttacacaagaacaagacctagattctacccatttgtgtttccccactctctcaatatgaaccctaaaa 19379989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 111 - 237
Target Start/End: Complemental strand, 25439875 - 25439751
Alignment:
Q  111 tcaagctttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttcc 210  Q
    |||||||||||||| ||||||||||||||  |||||||||||| ||| ||||||||||||  |||||||||||| ||||||||||||||||||||||| |    
T  25439875 tcaagctttacacatgaacaaaccctagag-ctaccctttggtattttcccactctcacactatgaaccctaaatcccaaggtgattacaatgttttt-c 25439778  T
Q  211 ccaacccaagagacactctcaacaaag 237  Q
    |||||| |||| || |||||| |||||    
T  25439777 ccaacctaagaaactctctcatcaaag 25439751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 24787226 - 24787151
Alignment:
Q  186 cccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  24787226 cccaaggtgattataatgtttttccc-aacccaagagacactctcaacaaagacactcaaccctttggttccctcct 24787151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 158
Target Start/End: Complemental strand, 26644972 - 26644842
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaag 126  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||   |||||| ||||| |||||||||    
T  26644972 ccaatatgacctaatctgggggagagagcagctctccaatccattatgatgaaagtgttacaaagagttacaagaaaatagcttgcaagc-ttacacaag 26644874  T
Q  127 aacaaaccctagattctaccctttggtgtttc 158  Q
    |||||  ||||  |||||||| || |||||||    
T  26644873 aacaagacctaatttctacccatttgtgtttc 26644842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 160
Target Start/End: Original strand, 3281730 - 3281862
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaag 126  Q
    ||||| || ||||||||||||||||||||||||||||||||||  |||| ||||||||||||||  |||||||||   |||||| ||||| |||||||||    
T  3281730 ccaatatgacctaatctgggggagagagcagctctccaatccacgatgatgaaagtgttacaaagagttacaagaaaatagcttgcaagc-ttacacaag 3281828  T
Q  127 aacaaaccctagattctaccctttggtgtttccc 160  Q
    |||||  ||||  |||||||| || |||||||||    
T  3281829 aacaagacctaatttctacccatttgtgtttccc 3281862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 183
Target Start/End: Complemental strand, 47704011 - 47703855
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||  ||||||||   |||||| ||||| ||||||||    
T  47704011 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagaattacaagaaattagcttacaagc-ttacacaa 47703913  T
Q  126 gaacaaaccctagattctaccc-tttggtgtttccccactctcacaacatgaaccctaa 183  Q
    ||||||  ||||  |||||||| ||| ||| |  ||||||||||||| ||||| |||||    
T  47703912 gaacaagacctaatttctacccattttgtg-tcacccactctcacaatatgaatcctaa 47703855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 21536635 - 21536541
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaagaacaa 131  Q
    |||||||||||||||||||||||||||||||||| ||| | ||||||||||||||  |||||||||   |||||| ||||| ||||||||||||||    
T  21536635 cctaatctgggggagagagcagctctccaatccactataatgaaagtgttacaaagagttacaagaaaatagcttgcaagc-ttacacaagaacaa 21536541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 24202635 - 24202573
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaaccc 248  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  24202635 acccaaggtgattacaatgtttttccc-aacccaagagacactctctacaaagacactcaaccc 24202573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 27104438 - 27104372
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  27104438 cctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 27104372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 16124591 - 16124516
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    ||||| || ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  16124591 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 16124516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 19072950 - 19073025
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    ||||| || |||||||||||||||||||||||||||||||||| || || |||||||||||||||| |||||||||    
T  19072950 ccaatatgacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaaga 19073025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 19120840 - 19120915
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    ||||| || |||||||||||||||||||||||||||||||||| || || |||||||||||||||| |||||||||    
T  19120840 ccaatatgacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaaga 19120915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 19366292 - 19366225
Alignment:
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    ||||||||||||||  |||||||||||||| || |||||||||||||||| ||| |||||||||||||    
T  19366292 ttacacaagaacaagacctagattctacccatttgtgtttccccactctctcaatatgaaccctaaaa 19366225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 9476283 - 9476387
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||||||| ||||||||||||||||||||||||| ||||| |||||| ||||||||| |||| ||||   |||||| ||||| ||||||||    
T  9476283 ccaatatgacctaatctaggggagagagcagctctccaatccactatgatgaaagtattacaaaagagttataagaaattagcttacaagc-ttacacaa 9476381  T
Q  126 gaacaa 131  Q
    ||||||    
T  9476382 gaacaa 9476387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 29651833 - 29651898
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 92  Q
    ||||| || ||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  29651833 ccaatatgacctaatctgggggagagagcagcactccaatccactatgatgaaagtgttacaaaag 29651898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 184
Target Start/End: Complemental strand, 13604689 - 13604541
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagctttcaagctttacacaagaacaaacc 134  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| |||||||||  |||||||| |   |||||| ||| | ||||||||||||||  |    
T  13604689 cctaatatgggggagagagcagctctccaatccactatgatgaaaatgttacaaagagttacaagaaaaatagcttgcaaac-ttacacaagaacaagac 13604591  T
Q  135 ctagattctaccctttggtgtttccccactctcacaa-catgaaccctaaa 184  Q
    |||  |||||||| || |||||| ||||||||| |||  ||||||||||||    
T  13604590 ctaatttctacccatttgtgttt-cccactctctcaataatgaaccctaaa 13604541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 775694 - 775759
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 92  Q
    ||||| || ||||||||||||||||||| |||||||||||||| || || ||||||||||||||||    
T  775694 ccaatatgacctaatctgggggagagagtagctctccaatccactaagatgaaagtgttacaaaag 775759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 13598420 - 13598485
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 92  Q
    ||||| || ||||||||||||||||||||||| || ||||||| ||||| ||||||||||||||||    
T  13598420 ccaatatgacctaatctgggggagagagcagcccttcaatccactatgatgaaagtgttacaaaag 13598485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 37069792 - 37069864
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaa 99  Q
    ||||| || ||||||||||||||||||||| |||||| ||||| ||||| ||||||||||||||  |||||||    
T  37069792 ccaatatgacctaatctgggggagagagcatctctccgatccactatgatgaaagtgttacaaagagttacaa 37069864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 32889461 - 32889523
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 89  Q
    ||||| || |||| ||||||||| ||||||||||||||||||| || || |||||||||||||    
T  32889461 ccaatatgacctagtctgggggatagagcagctctccaatccactaagatgaaagtgttacaa 32889523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 47098887 - 47098837
Alignment:
Q  40 aatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 89  Q
    |||||||||||||||||||| |||||||||| || || |||||||||||||    
T  47098887 aatctgggggagagagcagccctccaatccactaagatgaaagtgttacaa 47098837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 19361298 - 19361237
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaaccc 248  Q
    |||||||||| ||||||||||||  ||||||||||||||  ||| | ||||||||||| |||||    
T  19361298 acccaaggtgtttacaatgtttt--cccaacccaagagatcctcactacaaagacactcaaccc 19361237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 39812059 - 39811811
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagcttt 119  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39812059 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagcttt 39811960  T
Q  120 acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaacccaa 219  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||||||||||||||| | ||||| ||    
T  39811959 acacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttttt-ctcaacctaa 39811861  T
Q  220 gagacactctcaacaaagacacttaaccca-ttggttccctcctatgcta 268  Q
    ||||||||||||||||||||||| |||||| ||||||||||||| |||||    
T  39811860 gagacactctcaacaaagacactcaacccatttggttccctcctttgcta 39811811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 22 - 237
Target Start/End: Original strand, 32246804 - 32247018
Alignment:
Q  22 gttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagctttac 121  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32246804 gttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagctttac 32246903  T
Q  122 acaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaacccaaga 221  Q
    ||| |||||||||||||||| ||||||||||| ||| ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  32246904 acatgaacaaaccctagattataccctttggtattttcccactctcacactatgaaccctaaatcccaaggtgattacaatgttttt-cccaacctaaga 32247002  T
Q  222 gacactctcaacaaag 237  Q
     ||||||||| |||||    
T  32247003 aacactctcatcaaag 32247018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 11099010 - 11098843
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagctttcaagc 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||||| |||||    
T  11099010 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcttgcaagc 11098911  T
Q  117 tttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11098910 tt-acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaa 11098843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 19344435 - 19344655
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagc-tttcaagct 117  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| |||||||||    
T  19344435 cagttcagccaatgtggcctaatctaggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagct 19344534  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgt--ttttccccaac 215  Q
    ||||||| ||||||||||||||  |||||||||||| ||| ||||| ||||||  ||||||||  || |||||||||||||||||||  |||| ||||||    
T  19344535 ttacacatgaacaaaccctaga-cctaccctttggtattttcccaccctcacactatgaacccataatcccaaggtgattacaatgttgtttttcccaac 19344633  T
Q  216 ccaagagacactctcaacaaag 237  Q
    | |||| ||||||||| |||||    
T  19344634 ctaagaaacactctcatcaaag 19344655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 19349293 - 19349513
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagc-tttcaagct 117  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| |||||||||    
T  19349293 cagttcagccaatgtggcctaatctaggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttttcaagct 19349392  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgt--ttttccccaac 215  Q
    ||||||| ||||||||||||||  |||||||||||| ||| ||||| ||||||  ||||||||  || |||||||||||||||||||  |||| ||||||    
T  19349393 ttacacatgaacaaaccctaga-cctaccctttggtattttcccaccctcacactatgaacccataatcccaaggtgattacaatgttgtttttcccaac 19349491  T
Q  216 ccaagagacactctcaacaaag 237  Q
    | |||| ||||||||| |||||    
T  19349492 ctaagaaacactctcatcaaag 19349513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 44312695 - 44312563
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagctttcaagctt 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  44312695 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagctt 44312596  T
Q  119 tacacaagaacaaaccctagattctaccctttg 151  Q
    |||||| ||||||||||||||||||||||||||    
T  44312595 tacacatgaacaaaccctagattctaccctttg 44312563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 14291502 - 14291669
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagctttcaagc 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||| |||||||    
T  14291502 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc 14291601  T
Q  117 tttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
     |||||||||||||| ||||||||||||||| |  |||||||||||||||||||| |||||||||||||    
T  14291602 -ttacacaagaacaagccctagattctacccatatgtgtttccccactctcacaatatgaaccctaaaa 14291669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 3491764 - 3491930
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagct 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    |||||| ||||||    
T  3491764 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagct 3491863  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    | ||||||||||||  |||||||||||||| || |||||||||||||||||||| |||||||||||||    
T  3491864 t-acacaagaacaagacctagattctacccatttgtgtttccccactctcacaatatgaaccctaaaa 3491930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 9296484 - 9296317
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagctttcaagc 116  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||| |||||||    
T  9296484 cagttcagccaatatggcctaatttgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc 9296385  T
Q  117 tttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
     ||| |||||||||| ||||||||||||||| |  |||||||||||||||||||| |||||||||||||    
T  9296384 -ttatacaagaacaagccctagattctacccatatgtgtttccccactctcacaatatgaaccctaaaa 9296317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 25403646 - 25403813
Alignment:
Q  19 tcagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagc 116  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    |||||| |||||    
T  25403646 tcagttcagccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagc 25403745  T
Q  117 tttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    || ||||||||||||  ||||| |||||||| || ||||||| |||||||||||| |||||||||||||    
T  25403746 tt-acacaagaacaagtcctagtttctacccatttgtgtttctccactctcacaatatgaaccctaaaa 25403813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 25398509 - 25398675
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagct 117  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    |||||| ||||||    
T  25398509 cagttcagccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagct 25398608  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    | ||||||||||||  ||||| |||||||| || ||||||| |||||||||||| |||||||||||||    
T  25398609 t-acacaagaacaagtcctagtttctacccatttgtgtttctccactctcacaatatgaaccctaaaa 25398675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 37 - 185
Target Start/End: Original strand, 25407653 - 25407802
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagctttacacaagaacaaacc 134  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    |||||| ||||||| ||||||||||||  |    
T  25407653 cctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagctt-acacaagaacaagtc 25407751  T
Q  135 ctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    |||| |||||||| || ||||||| |||||||||||| |||||||||||||    
T  25407752 ctagtttctacccatttgtgtttctccactctcacaatatgaaccctaaaa 25407802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 11098790 - 11098714
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  11098790 acccaaggtgattacaatgtttttccc-aacccaagagacactctctacaaagacactcaaccctttggttccctcct 11098714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 183
Target Start/End: Original strand, 13569350 - 13569506
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||   ||||||  ||| |||||||||    
T  13569350 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataag-tttacacaa 13569448  T
Q  126 gaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaa 183  Q
    ||||||  ||||  |||||||||||| |  |  ||||||||||||| ||||| |||||    
T  13569449 gaacaagacctaatttctaccctttgtttgtcacccactctcacaatatgaatcctaa 13569506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 40738857 - 40739012
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctt 118  Q
    ||||||||||||| || ||||||||||||| |||||||||||||||||||| ||||| ||||||||||||| |    | ||     |||||| ||||| |    
T  40738857 cagttcagccaatatgacctaatctggggg-gagagcagctctccaatccactatgatgaaagtgttacaaga----aaaa-----tagcttgcaagc-t 40738945  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    |||||||||||||  | ||| |||||||| || |||||||||||||||||||| |||||||||||||    
T  40738946 tacacaagaacaagtcttagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaa 40739012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 8040073 - 8040240
Alignment:
Q  20 cagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag---gttacaagactctagctttcaa 114  Q
    |||||||| ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||   |||||||||   |||||| |||    
T  8040073 cagttcagtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagagttacaagaaattagcttacaa 8040172  T
Q  115 gctttacacaagaacaaaccctagattctaccc-tttggtgtttccccactctcacaacatgaaccctaa 183  Q
    || ||||||||||||||  ||||  |||||||| ||| ||| |  ||||||||||||| ||||| |||||    
T  8040173 gc-ttacacaagaacaagacctaatttctacccattttgtg-tcacccactctcacaatatgaatcctaa 8040240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 9296265 - 9296189
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||||| ||||||| ||||||| || ||||||||||| ||||| |||||||||||||    
T  9296265 acccaaggtgattacaatgtttttccc-aacccaatagacactttctacaaagacactcaaccctttggttccctcct 9296189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 14291722 - 14291798
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaacccattggttccctcct 262  Q
    ||||||||||||||||||||||||||| ||||||||||||||| || |||||||| || ||||| |||||||||||||    
T  14291722 acccaaggtgattacaatgtttttccc-aacccaagagacactatctacaaagacgctcaaccctttggttccctcct 14291798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 28259252 - 28259120
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaag 126  Q
    ||||| || |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||   |||||| ||||| |||||||||    
T  28259252 ccaatatgacctaatttgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaaatagcttgcaagc-ttacacaag 28259154  T
Q  127 aacaaaccctagattctaccctttggtgtttccc 160  Q
    |||||   |||  |||||||| || |||||||||    
T  28259153 aacaagatctaatttctacccatttgtgtttccc 28259120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 10445519 - 10445415
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||   |||||| ||| | ||||||||    
T  10445519 ccaatatgacctaatctgggggagagagcagctctccaatccactattatgaaagtgttacaaaagagttacaagaaattagcttacaatc-ttacacaa 10445421  T
Q  126 gaacaa 131  Q
    ||||||    
T  10445420 gaacaa 10445415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 34388880 - 34388955
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    ||||| || ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||| |||||||||    
T  34388880 ccaatatgacctaatctgggggagagagtagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 34388955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 131
Target Start/End: Complemental strand, 34682398 - 34682305
Alignment:
Q  39 taatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaagaacaa 131  Q
    |||||||||||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||   |||||| || || ||||||||||||||    
T  34682398 taatctgggggagagagcagctctccaatccactataatgaaagtgttacaaaagagttacaagaaattagcttacaggc-ttacacaagaacaa 34682305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 183
Target Start/End: Complemental strand, 8390216 - 8390069
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaagaacaaacc 134  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||||||||| ||||| |||||||||   |||||| ||||| || |||||||||||  |    
T  8390216 cctaatttgggggagagagcagctctccaatccactatgatgaaagtgttaaaaaagagttacaagaaattagcttacaagc-ttgcacaagaacaagac 8390118  T
Q  135 ctagattctaccc-tttggtgtttccccactctcacaacatgaaccctaa 183  Q
    |||  |||||||| ||| ||| |  ||||||||||||| ||||| |||||    
T  8390117 ctaatttctacccattttgtg-tcacccactctcacaatatgaatcctaa 8390069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 10707327 - 10707223
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||||| ||||||||||| || |||||||||||| ||||| |||||||||||||||| |||||||||   |||||| ||||| ||||||||    
T  10707327 ccaatatgacctaatatgggggagagaacaactctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagc-ttacacaa 10707229  T
Q  126 gaacaa 131  Q
    ||||||    
T  10707228 gaacaa 10707223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 17865234 - 17865329
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaagaacaa 131  Q
    ||||||||||||||||||||| | |||||||||| ||||| |||||||||||||||| |||||||||   ||||||  |||| ||||||||||||||    
T  17865234 cctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagc-ttacacaagaacaa 17865329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 21629957 - 21630040
Alignment:
Q  20 cagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 101  Q
    |||||||| ||||| || |||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  21629957 cagttcagtccaatatgacctaatctgggg-agagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 21630040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 20522242 - 20522317
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa-ggttacaaga 101  Q
    ||||| || ||||||||||||||||||||| | |||||||||| ||||| ||||||||||||||| ||||||||||    
T  20522242 ccaatatgacctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaagggttacaaga 20522317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 184
Target Start/End: Complemental strand, 36757837 - 36757681
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaag 126  Q
    ||||| || ||||||||||||| || | ||||||||||||||| ||||| ||||||||| ||||  |||| ||||    ||||||||||| |||||||||    
T  36757837 ccaatatgacctaatctgggggggataacagctctccaatccagtatgatgaaagtgtttcaaagagttataagaaaaaagctttcaagc-ttacacaag 36757739  T
Q  127 aacaaaccctagattctaccctttggtgtttccccactctcacaa-catgaaccctaaa 184  Q
    |||||| ||||  |||||||| || ||| || ||||||||| |||  ||||||||||||    
T  36757738 aacaaaacctaatttctacccatttgtg-ttacccactctctcaatgatgaaccctaaa 36757681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 14699082 - 14698979
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || ||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||||||||   ||||||  |||| ||||||||    
T  14699082 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaag-gttacaaaagagttacaagaaattagcttataagc-ttacacaa 14698985  T
Q  126 gaacaa 131  Q
    ||||||    
T  14698984 gaacaa 14698979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 23078545 - 23078442
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaag 126  Q
    ||||| || |||||| ||||||||||| || |||||||||||| ||||| |||||||||| |||  |||||||||   |||||| ||||| |||||||||    
T  23078545 ccaatatgacctaatatgggggagagaacaactctccaatccactatgatgaaagtgttagaaagagttacaagaaaatagcttgcaagc-ttacacaag 23078447  T
Q  127 aacaa 131  Q
    |||||    
T  23078446 aacaa 23078442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 31056075 - 31056131
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 92  Q
    |||||||| ||||||||||||||||||||||||| || || ||||||||||||||||    
T  31056075 cctaatctaggggagagagcagctctccaatccactaagatgaaagtgttacaaaag 31056131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 25409860 - 25409922
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaaccc 248  Q
    |||||||||| |||||||||||||||| |||||||||||  ||||| ||||||||||| |||||    
T  25409860 acccaaggtgtttacaatgtttttccc-aacccaagagatcctctctacaaagacactcaaccc 25409922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 42039744 - 42039670
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 101  Q
    ||||| || ||||||||| ||||||||||||||||| |||||| ||||| ||||||||||| ||  |||||||||    
T  42039744 ccaatatgacctaatctgtgggagagagcagctctctaatccactatgatgaaagtgttacgaagagttacaaga 42039670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 33118158 - 33118262
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa-ggttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||||| |||||||||||||||| |||||||||| ||||| ||||| |||||||||  |||||||||   ||||||  |||| ||||||||    
T  33118158 ccaatatgacctaatttgggggagagagcagccctccaatccactatgatgaaagagttacaaaatagttacaagaaattagcttataagc-ttacacaa 33118256  T
Q  126 gaacaa 131  Q
    ||||||    
T  33118257 gaacaa 33118262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 39482953 - 39483057
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||||| |||||||||||||||  |||||||||| ||||| |||| ||||||||||| |||||||||   ||||||  |||| ||||||||    
T  39482953 ccaatatgacctaatatgggggagagagcaggcctccaatccactatgatgaaaatgttacaaaagagttacaagaaattagcttataagc-ttacacaa 39483051  T
Q  126 gaacaa 131  Q
    ||||||    
T  39483052 gaacaa 39483057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 16940273 - 16940219
Alignment:
Q  39 taatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 92  Q
    |||||||||||| ||| |||| |||||||||| ||||| ||||||||||||||||    
T  16940273 taatctgggggaaagatcagccctccaatccactatgatgaaagtgttacaaaag 16940219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 17010938 - 17010884
Alignment:
Q  39 taatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 92  Q
    |||||||||||| ||| |||| |||||||||| ||||| ||||||||||||||||    
T  17010938 taatctgggggaaagatcagccctccaatccactatgatgaaagtgttacaaaag 17010884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 156; Significance: 6e-83; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 9713 - 9523
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctttcaagcttt 119  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9713 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagccttcaagcttt 9614  T
Q  120 acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccc 211  Q
    ||||| |||||||||||||| ||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  9613 acacatgaacaaaccctaga-tctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttccc 9523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 93 - 268
Target Start/End: Complemental strand, 3845 - 3671
Alignment:
Q  93 gttacaagactctagctttcaagctttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaagg 192  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||| ||| ||||||||||||  ||||||||||||||||||||    
T  3845 gttacaagactctagccttcaagctttacacatgaacaaaccctagat-ctaccctttggtattttcccactctcacactatgaaccctaaaacccaagg 3747  T
Q  193 tgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaaccca-ttggttccctcctatgcta 268  Q
    |||||||||||||||| || |||| ||||||||||||||||||||||||| |||||| ||||||||||||| |||||    
T  3746 tgattacaatgttttt-cctaacctaagagacactctcaacaaagacactcaacccatttggttccctcctttgcta 3671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 377 - 592
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctagctt-tcaagctt 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||    
T  377 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaagactctagcttatcaagctt 475  T
Q  119 tacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtttttccccaaccca 218  Q
    |||||| ||||||||||||||  |||||||||||| ||| ||||||||||||  |||||||| ||| ||||||||||||||||||||||| ||||||| |    
T  476 tacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgttttt-cccaaccta 573  T
Q  219 agagacactctcaacaaag 237  Q
    ||| || |||||| |||||    
T  574 agaaactctctcatcaaag 592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 109; Significance: 7e-55; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 14380 - 14161
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagctt-tcaagct 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||||| |||||||    
T  14380 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagct 14281  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaacc 216  Q
    ||||||||||  ||||||||||  ||||||||||||  || ||||  ||||||  ||||||||  || |||||||||||||||||||| ||| |||||||    
T  14280 ttacacaagacaaaaccctaga-cctaccctttggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacc 14182  T
Q  217 caagagacactctcaacaaag 237  Q
     |||| ||||||||| |||||    
T  14181 taagatacactctcatcaaag 14161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 19236 - 19017
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagctt-tcaagct 117  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||  |||||||||||| ||||||||| |||||||| |||||||    
T  19236 cagttcagccattgtggcctaatctgggggagagagcagctctccaatacaatatgtgagtgtgttacaaaagagttacaagaatctagcttatcaagct 19137  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaacc 216  Q
    ||||||||||  |||||||||| |||||||||||||  || ||||  ||||||  ||||||||  ||  ||||||||||||||||||| ||| |||||||    
T  19136 ttacacaagacaaaaccctaga-tctaccctttggtaatttcccaacctcacactatgaacccataattccaaggtgattacaatgttgttttcccaacc 19038  T
Q  217 caagagacactctcaacaaag 237  Q
     |||| ||||||||| |||||    
T  19037 taagaaacactctcatcaaag 19017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 2322 - 2103
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagctt-tcaagct 117  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||| ||||||||| |||||||| |||||||    
T  2322 cagttcagccaatgtggcctaatctgggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagct 2223  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaacc 216  Q
    ||||||||||  ||||| |||| |||||||||||||  || ||||  ||||||  ||||||||  || |||||||||||||||||||| ||| |||||||    
T  2222 ttacacaagacaaaaccataga-tctaccctttggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacc 2124  T
Q  217 caagagacactctcaacaaag 237  Q
     |||| ||||||||| |||||    
T  2123 taagatacactctcatcaaag 2103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 149027 - 148808
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactctagctt-tcaagct 117  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||| ||||||||| |||||||| |||||||    
T  149027 cagttcagccaatgtggcctaatctgggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctagcttatcaagct 148928  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaacc 216  Q
    ||||||||||  ||||| |||| |||||||||||||  || ||||  ||||||  ||||||||  || |||||||||||||||||||| ||| |||||||    
T  148927 ttacacaagacaaaaccataga-tctaccctttggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacc 148829  T
Q  217 caagagacactctcaacaaag 237  Q
     |||| ||||||||| |||||    
T  148828 taagatacactctcatcaaag 148808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 88; Significance: 2e-42; HSPs: 4)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 18035 - 17869
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagct 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    |||||| ||||||    
T  18035 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagct 17936  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    | ||||||||||||  | ||| |||||||| || |||||||||||||||||||| |||||||||||||    
T  17935 t-acacaagaacaagtcatagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaa 17869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 24128 - 23962
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc-tagctttcaagct 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    |||||| ||||||    
T  24128 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagct 24029  T
Q  118 ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 185  Q
    | ||||||||||||  | ||| |||||||| || |||||||||||||||||||| |||||||||||||    
T  24028 t-acacaagaacaagtcatagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaa 23962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 17818 - 17756
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaaccc 248  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||| ||||||||||| |||||    
T  17818 acccaaggtgattacaatgttttt-cccaacccaagagatcctctctacaaagacactcaaccc 17756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 23911 - 23849
Alignment:
Q  185 acccaaggtgattacaatgtttttccccaacccaagagacactctcaacaaagacacttaaccc 248  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||| ||||||||||| |||||    
T  23911 acccaaggtgattacaatgttttt-cccaacccaagagatcctctctacaaagacactcaaccc 23849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 182035 - 181980
Alignment:
Q  20 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatg 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  182035 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatg 181980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 176925 - 176829
Alignment:
Q  142 ctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgtt-tttccccaacccaagagacactctcaacaaag 237  Q
    ||||||||||||  || ||||  ||||||  ||||||||  || |||||||||||||||||||| ||| ||||||| |||| ||||||||| |||||    
T  176925 ctaccctttggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 176829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 8494 - 8420
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 101  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  8494 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 8420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 156
Target Start/End: Complemental strand, 44022 - 43908
Alignment:
Q  42 tctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaagaacaaaccctagat 140  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||   |||||| ||||| ||| ||||||||||  ||||  |    
T  44022 tctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaaatagcttgcaagc-ttatacaagaacaagacctaatt 43924  T
Q  141 tctaccctttggtgtt 156  Q
    ||||||| || |||||    
T  43923 tctacccatttgtgtt 43908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 36907 - 36804
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactctagctttcaagctttacacaag 126  Q
    ||||| || |||||||| ||| |||||||||||| |||| ||| ||||| ||||||||||||||  |||||||||   |||||| ||||| |||||||||    
T  36907 ccaatatgacctaatctagggaagagagcagctcgccaacccactatgatgaaagtgttacaaagagttacaagaaaatagcttgcaagc-ttacacaag 36809  T
Q  127 aacaa 131  Q
    |||||    
T  36808 aacaa 36804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 10751 - 10855
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaa 125  Q
    ||||| || |||||| ||||||||||||||||||||||||||| || || |||||||||||||||| |||||||||   ||| || ||||| ||||||||    
T  10751 ccaatatgacctaatttgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaaattagtttacaagc-ttacacaa 10849  T
Q  126 gaacaa 131  Q
    ||||||    
T  10850 gaacaa 10855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 85696 - 85779
Alignment:
Q  20 cagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 101  Q
    |||||||| ||||| || |||||||||||||||||||| |||||||||||||  |||| ||||||||||||||  |||||||||    
T  85696 cagttcagtccaatatgacctaatctgggggagagagcggctctccaatccaccatgatgaaagtgttacaaagagttacaaga 85779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 184
Target Start/End: Complemental strand, 133346 - 133198
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagctttcaagctttacacaagaacaaacc 134  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| |||||||||  |||||||| |   |||||| ||| | ||||||||||||||  |    
T  133346 cctaatatgggggagagagcagctctccaatccactatgatgaaaatgttacaaagagttacaagaaaaatagcttgcaaac-ttacacaagaacaagac 133248  T
Q  135 ctagattctaccctttggtgtttccccactctcacaa-catgaaccctaaa 184  Q
    |||  |||||||| || |||||| ||||||||| |||  ||||||||||||    
T  133247 ctaatttctacccatttgtgttt-cccactctctcaataatgaaccctaaa 133198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 2514 - 2579
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 92  Q
    ||||| || |||||||||||||||| |||||| |||||||||| ||||| ||||||||||||||||    
T  2514 ccaatatgacctaatctgggggagacagcagccctccaatccactatgatgaaagtgttacaaaag 2579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 5705 - 5770
Alignment:
Q  28 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 92  Q
    ||||| || ||||||||||||||||||||||| || ||||||| ||||| ||||||||||||||||    
T  5705 ccaatatgacctaatctgggggagagagcagcccttcaatccactatgatgaaagtgttacaaaag 5770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 45284 - 45337
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 89  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| |||||||    
T  45284 cctaatctgggggagagagcagctctccaatccactatgatgaaagcgttacaa 45337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 11500 - 11533
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatcca 70  Q
    |||| |||||||||||||||||||||||||||||    
T  11500 cctagtctgggggagagagcagctctccaatcca 11533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 17294 - 17389
Alignment:
Q  37 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactctagctttcaagctttacacaagaacaa 131  Q
    |||||| ||||  |||||||| | |||||||||| ||||| |||||||||||||||| |||||||||   ||||||  |||| ||||||||||||||    
T  17294 cctaatatgggaaagagagcaaccctccaatccattatgatgaaagtgttacaaaagagttacaagaaattagcttataagc-ttacacaagaacaa 17389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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