View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1137_low_174 (Length: 252)
Name: NF1137_low_174
Description: NF1137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1137_low_174 |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 35815078 - 35815314
Alignment:
| Q |
1 |
tatgtattttgatttatcaattatatagcttcaaatctttcagtagaatctaaactaattaattaattagcagcaacttgtatatataactatagctata |
100 |
Q |
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| T |
35815078 |
tatgtattttgatttatcaattatatagcttcaaatctttcagtagaatctaaactaattaattaattagca---acttgtatatataactatagctata |
35815174 |
T |
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| Q |
101 |
agataaatttacatttgaattattggatatccgatgggagaagcagaaaaggattagataacaaattaaagatcagtatattgaaagtcttgataaatga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35815175 |
agataaatttacatttgaattattggatatccgatgggagaagcagaaaaggattagataacaaattaaagatcagtatattgaaagtcttgataaatga |
35815274 |
T |
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| Q |
201 |
aaatagg--aaaagaggtcgagtatatggatagagcaaca |
238 |
Q |
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||||||| |||||||||| |||||||||||||||||||| |
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| T |
35815275 |
aaataggaaaaaagaggtcaagtatatggatagagcaaca |
35815314 |
T |
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