View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1137_low_20 (Length: 628)
Name: NF1137_low_20
Description: NF1137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1137_low_20 |
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Alignment Details
Target: chr1 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 341 - 605
Target Start/End: Complemental strand, 47128994 - 47128730
Alignment:
| Q |
341 |
aatattatgttgaaaatatttttgataatgaaaatgggttaacctgataaattgtgtcattgttgcagatcctaaaactgagtcaagattgcatctcctg |
440 |
Q |
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| T |
47128994 |
aatatcatgttgaaaatatttttgataatgaaaatgggttaacctgataaattgtttcattgttgcagatcctaaaactgagtcaagattgcatctcctg |
47128895 |
T |
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| Q |
441 |
aatctgaacatttatgttccaagagatgaacagtttggtcatgtaaagttttcagactttctagcttattcactcaaatccgtcactcaggttttgcttc |
540 |
Q |
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| T |
47128894 |
aatcttaacatttatgttccaagagatgaacagtttggtcatgtaaagttttcagactttctagcttattcactcaaatccgtcactcaggttttgcttc |
47128795 |
T |
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| Q |
541 |
cagagcttagatctctgtgtgacaaaactattaatgagtttgatacttttcaagatgtacttgat |
605 |
Q |
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| T |
47128794 |
cagagcttagatctctgtgtgacaaaactattaatgagtttgatacttttcaagatgtacttgat |
47128730 |
T |
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