View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1137_low_200 (Length: 215)
Name: NF1137_low_200
Description: NF1137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1137_low_200 |
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Alignment Details
Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 17443555 - 17443663
Alignment:
| Q |
12 |
tgtgtagttcataatttattcatgatgttgggtgagagtagctctccatgtttggccttatttc-tttctagtttcacgaca-tttttgttattatccaa |
109 |
Q |
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| T |
17443555 |
tgtgtagttcataatttattcatgttgttgggtgagagtagctctccatgtttggcc-tatttcttttctagtttcacgacatttttttttattatccaa |
17443653 |
T |
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| Q |
110 |
atgtacttat |
119 |
Q |
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|||||||||| |
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| T |
17443654 |
atgtacttat |
17443663 |
T |
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