View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1137_low_68 (Length: 442)
Name: NF1137_low_68
Description: NF1137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1137_low_68 |
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Alignment Details
Target: chr7 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 30 - 434
Target Start/End: Original strand, 37834637 - 37835041
Alignment:
| Q |
30 |
accgcggcaccggaaaatcaagcctcatcgctgccatagcgtcggactcattccccgataccgttcctcccgttcttccgcctactctcttgcccgcaga |
129 |
Q |
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| T |
37834637 |
accgcggcaccggaaaatcaagcctcatcgctgccatagcgtcggagtcattccccgataccgttcttcccgttcttccgcctactctcttgcccgcaga |
37834736 |
T |
|
| Q |
130 |
atatttccccgatcatgttcccattaccgtaatcgacacatcctctaggtaaattacgcttttatttgcatatatattcaattgttatttggaattaatc |
229 |
Q |
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| T |
37834737 |
ttatttccccgatcatgttcccattaccgtaatcgacacatcctctaggtaaattacgcttttatttgcatatatattcaattgttatttggaattaatc |
37834836 |
T |
|
| Q |
230 |
actttccatttttatcaattgattgatcaattaaagtcaacctctgcatttaattcattcatttaaatttgattcaatatttattttcacctaaatgtgt |
329 |
Q |
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| T |
37834837 |
actttccatttttatcaattgattgatcaattaaagtcaacctctgcatttaattcattcatttaaatttgattcaatatttattttcacctaaatgtgt |
37834936 |
T |
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| Q |
330 |
gttgtattgcattttcttcattgaattatgtttgtgttgaagttatgtttgttggatgtgtcgatttgaaatgattgattagtgaatgaaatcgtgatat |
429 |
Q |
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|||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | |
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| T |
37834937 |
gttgtattgcattttcttcactgaattatgtttgcgttgaagttatgtttgttccatgtctcgatttgaaatgattgattagtgaatgaaatcgtgattt |
37835036 |
T |
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| Q |
430 |
tgttg |
434 |
Q |
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| T |
37835037 |
tgttg |
37835041 |
T |
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