View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1137_low_88 (Length: 381)

Name: NF1137_low_88
Description: NF1137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1137_low_88
NF1137_low_88
[»] chr2 (9 HSPs)
chr2 (96-348)||(5524306-5524573)
chr2 (99-174)||(19890186-19890261)
chr2 (99-163)||(31452344-31452407)
chr2 (99-164)||(1334881-1334946)
chr2 (89-146)||(9448941-9448998)
chr2 (89-137)||(19514942-19514990)
chr2 (91-173)||(4762384-4762466)
chr2 (104-146)||(15505606-15505648)
chr2 (99-164)||(34904785-34904850)
[»] chr5 (13 HSPs)
chr5 (90-174)||(30501128-30501212)
chr5 (90-174)||(30541471-30541555)
chr5 (93-174)||(16667283-16667364)
chr5 (93-164)||(7719248-7719319)
chr5 (89-167)||(34899123-34899201)
chr5 (99-174)||(18229599-18229674)
chr5 (90-151)||(7968447-7968508)
chr5 (99-164)||(9276577-9276642)
chr5 (99-163)||(30104849-30104913)
chr5 (112-174)||(40530445-40530507)
chr5 (99-174)||(8208213-8208288)
chr5 (99-174)||(8221156-8221231)
chr5 (92-162)||(39558757-39558827)
[»] chr8 (19 HSPs)
chr8 (99-174)||(2258088-2258163)
chr8 (107-174)||(33067536-33067603)
chr8 (99-174)||(35901965-35902040)
chr8 (90-174)||(33013079-33013163)
chr8 (99-174)||(27801223-27801298)
chr8 (99-174)||(42636363-42636438)
chr8 (99-174)||(3146070-3146149)
chr8 (99-164)||(36355954-36356019)
chr8 (106-174)||(28207658-28207726)
chr8 (99-167)||(37427232-37427300)
chr8 (99-174)||(1135195-1135270)
chr8 (99-174)||(24695781-24695855)
chr8 (99-164)||(12684491-12684556)
chr8 (99-151)||(26750607-26750659)
chr8 (99-174)||(1369856-1369931)
chr8 (123-174)||(17081392-17081443)
chr8 (99-164)||(4384133-4384197)
chr8 (99-164)||(33949547-33949612)
chr8 (99-167)||(884458-884525)
[»] chr4 (23 HSPs)
chr4 (99-174)||(35777696-35777771)
chr4 (99-164)||(31429321-31429386)
chr4 (99-174)||(47995734-47995809)
chr4 (90-174)||(7852532-7852616)
chr4 (99-162)||(8297917-8297980)
chr4 (99-174)||(50341864-50341939)
chr4 (90-173)||(45900137-45900220)
chr4 (99-175)||(50427022-50427098)
chr4 (98-174)||(53014202-53014278)
chr4 (99-174)||(7444382-7444457)
chr4 (99-162)||(13585258-13585321)
chr4 (107-174)||(27953046-27953113)
chr4 (99-174)||(41462083-41462158)
chr4 (99-174)||(51834948-51835023)
chr4 (99-165)||(34391704-34391770)
chr4 (101-162)||(8261154-8261215)
chr4 (101-162)||(8274571-8274632)
chr4 (94-138)||(23605659-23605703)
chr4 (90-174)||(24175387-24175471)
chr4 (99-174)||(24229643-24229718)
chr4 (99-174)||(25115261-25115335)
chr4 (116-174)||(36702818-36702876)
chr4 (99-164)||(49400656-49400721)
[»] chr1 (5 HSPs)
chr1 (99-174)||(2864176-2864251)
chr1 (92-174)||(43397005-43397087)
chr1 (104-167)||(40460725-40460788)
chr1 (90-174)||(39150616-39150700)
chr1 (103-167)||(34409775-34409838)
[»] chr7 (15 HSPs)
chr7 (99-175)||(28770510-28770586)
chr7 (90-174)||(28663127-28663211)
chr7 (99-174)||(39320979-39321054)
chr7 (99-162)||(43224084-43224147)
chr7 (90-174)||(27123308-27123392)
chr7 (90-174)||(44537375-44537459)
chr7 (99-174)||(7653610-7653685)
chr7 (99-162)||(9718991-9719054)
chr7 (90-164)||(43234834-43234908)
chr7 (90-162)||(14651378-14651450)
chr7 (90-174)||(35496561-35496645)
chr7 (99-173)||(25886205-25886279)
chr7 (99-132)||(32051331-32051364)
chr7 (129-174)||(44592900-44592945)
chr7 (90-174)||(35731321-35731405)
[»] chr6 (8 HSPs)
chr6 (99-175)||(32823710-32823786)
chr6 (99-174)||(31855088-31855163)
chr6 (99-175)||(30801774-30801850)
chr6 (90-174)||(9762836-9762921)
chr6 (102-174)||(3766311-3766383)
chr6 (99-174)||(17215680-17215755)
chr6 (107-164)||(1841027-1841084)
chr6 (102-162)||(5446662-5446722)
[»] chr3 (6 HSPs)
chr3 (99-174)||(29083896-29083972)
chr3 (98-164)||(40673478-40673544)
chr3 (99-174)||(47638929-47639004)
chr3 (99-174)||(51351311-51351386)
chr3 (116-174)||(24791530-24791588)
chr3 (92-174)||(52249360-52249442)
[»] scaffold0268 (1 HSPs)
scaffold0268 (99-174)||(20246-20320)
[»] scaffold0036 (1 HSPs)
scaffold0036 (99-174)||(62522-62597)
[»] scaffold0004 (1 HSPs)
scaffold0004 (120-174)||(335866-335920)


Alignment Details
Target: chr2 (Bit Score: 126; Significance: 7e-65; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 96 - 348
Target Start/End: Complemental strand, 5524573 - 5524306
Alignment:
Q  96 ttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaacttttcnnnnnnnnn--taccatatt 193  Q
    ||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||| || |||||||||||||||||||           ||| |||||    
T  5524573 ttgttaagcactttaaatagtaaatcttaaataaaaagttgtgcattgaatgcattaaaagttgtaataattaacttttcaaaaaaataattactatatt 5524474  T
Q  194 tgagatgcttaaagaatgctccaagggcaatcctaattttaattacc-------------aggatgtgagatatcaaaccaaattatatactatcctact 280  Q
    |  |||||||||||||||| |||||  |||||||||||||||||||              | ||||||||||||||||||||||||||||||||||||||    
T  5524473 taggatgcttaaagaatgccccaagtccaatcctaattttaattacacaaacttcgtagaaagatgtgagatatcaaaccaaattatatactatcctact 5524374  T
Q  281 actaactaaattatcaactccatccatccaaaggggaatgtgggaatcctaagtcttttatattcttc 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5524373 actaactaaattatcaactccatccatccaaaggggaatgtgggaatcctaagtcttttattttcttc 5524306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 19890186 - 19890261
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||||| ||||| |||||||| |||||||||||||| ||| ||| |||| |||||||||||| || ||||||    
T  19890186 ttaagcacttaaaataataagtttttaatgaaaagttgtgtattaaatgcattggaaattgtaatagttgactttt 19890261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 31452344 - 31452407
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaat 163  Q
    ||||||||||||||||||||||||| ||| |||||||||| ||||||| ||||  ||||||||||    
T  31452344 ttaagcactttaaatagtaagtttttaat-aaaagttgtgtattgaatgcattgaaaattgtaat 31452407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 1334881 - 1334946
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaata 164  Q
    |||||||||||||||  |||||||| |||||||| ||||  ||||||| |||| ||||||||||||    
T  1334881 ttaagcactttaaatgataagtttttaatgaaaaattgtatattgaatgcattggaaattgtaata 1334946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 9448941 - 9448998
Alignment:
Q  89 agggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaat 146  Q
    ||||||||  |||| |||||||||| ||||||||| |||||||||||||| |||||||    
T  9448941 agggcactctttaaacactttaaatggtaagtttttaatgaaaagttgtgtattgaat 9448998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 19514990 - 19514942
Alignment:
Q  89 agggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgt 137  Q
    ||||||||  ||||||||||||||| |||||||||| ||||||||||||    
T  19514990 agggcactctttaagcactttaaattgtaagttttatatgaaaagttgt 19514942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 173
Target Start/End: Complemental strand, 4762466 - 4762384
Alignment:
Q  91 ggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaacttt 173  Q
    ||||||| |||| ||||||||||||||| |||| ||| |||| ||||| ||||||| ||||  ||||| ||||| || |||||    
T  4762466 ggcactttttaatcactttaaatagtaaatttttaataaaaaattgtgtattgaatgcattgaaaattataatagttgacttt 4762384  T

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Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 146
Target Start/End: Complemental strand, 15505648 - 15505606
Alignment:
Q  104 cactttaaatagtaagttttaaatgaaaagttgtgcattgaat 146  Q
    |||||||||||||||||||  |||||||||||||| |||||||    
T  15505648 cactttaaatagtaagtttggaatgaaaagttgtgtattgaat 15505606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 34904785 - 34904850
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaata 164  Q
    ||||||||||||||| ||||||| | |||||||| || || ||| ||| ||||| |||||||||||    
T  34904785 ttaagcactttaaattgtaagttattaatgaaaaattttgtattaaattcattaaaaattgtaata 34904850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 30501128 - 30501212
Alignment:
Q  90 gggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||| ||||||||||||||| ||||||    
T  30501128 gggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgtattgaatgtattggaaattgtaataattgactttt 30501212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 30541471 - 30541555
Alignment:
Q  90 gggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||| ||||||||||||||| ||||||    
T  30541471 gggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgtattgaatgtattggaaattgtaataattgactttt 30541555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 16667283 - 16667364
Alignment:
Q  93 cacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||||| |||||||  ||| ||||||||||||||| ||||||    
T  16667283 cactttttaagcactttaaatagtaagtttttaatgaaaaattgtgtattgaatgtattggaaattgtaataattgactttt 16667364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 7719319 - 7719248
Alignment:
Q  93 cacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaata 164  Q
    ||||| |||||||||||||||| |||||||| |||||||||||||| |||||||| ||| ||||||||||||    
T  7719319 cactttttaagcactttaaataataagtttttaatgaaaagttgtgtattgaatatattggaaattgtaata 7719248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 34899123 - 34899201
Alignment:
Q  89 agggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataatt 167  Q
    ||||||||  |||| |||||||||||||||||||||||||||||||| |  ||| ||| ||||||||||||||||||||    
T  34899123 agggcactctttaaacactttaaatagtaagttttaaatgaaaagttatatattaaatgcattagaaattgtaataatt 34899201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 18229599 - 18229674
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||||||||||| ||||||||| |||||||| ||||  |||||||  ||| |||||||||||| |||||||||    
T  18229599 ttaagcactttaaatggtaagtttttaatgaaaaattgtttattgaatgtattggaaattgtaatagttaactttt 18229674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 7968508 - 7968447
Alignment:
Q  90 gggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacatt 151  Q
    |||||||  ||||||||||||||||||||||||| |||||||||||||| ||| ||| ||||    
T  7968508 gggcactctttaagcactttaaatagtaagtttttaatgaaaagttgtgtattaaatgcatt 7968447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 9276577 - 9276642
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaata 164  Q
    ||||||||||||||||||||||||| ||||||||||| || ||||||| ||||  ||||| |||||    
T  9276577 ttaagcactttaaatagtaagtttttaatgaaaagttatgtattgaatgcattgaaaattataata 9276642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 30104913 - 30104849
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaat 163  Q
    |||| |||||||| | ||||||||| |||||||||||||| ||||||| |||| |||||||||||    
T  30104913 ttaaacactttaagtggtaagtttttaatgaaaagttgtgtattgaatgcattggaaattgtaat 30104849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 40530445 - 40530507
Alignment:
Q  112 atagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||||||| |||||| ||||||| |||||||  |||||||||||| ||| |||||||||    
T  40530445 atagtaagtttttaatgaatagttgtgtattgaatgaattagaaattgtgatagttaactttt 40530507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 8208288 - 8208213
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||| ||| ||||||  ||||||||| |||||||||| || | ||||| ||||| |||||||||||||| ||||||    
T  8208288 ttaaacacattaaatgataagttttatatgaaaagttatgtaatgaatgcattaaaaattgtaataattgactttt 8208213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 8221231 - 8221156
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||| ||||||||||||||||| ||| |||| ||||| ||||||| ||||  || |||||||| || ||||||    
T  8221231 ttaagcattttaaatagtaagtttttaataaaaaattgtgtattgaatgcattgaaagttgtaatagttgactttt 8221156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 39558757 - 39558827
Alignment:
Q  92 gcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaa 162  Q
    |||||| ||||||| ||||||||||||||||| | |||||||| ||| ||  ||| |||| ||||||||||    
T  39558757 gcacttcttaagcattttaaatagtaagtttttattgaaaagtcgtgtatcaaatgcattggaaattgtaa 39558827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 2258088 - 2258163
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||||||||||| |||||||||||||||||||||||| ||| ||||||||| |||||||||| ||||||||||    
T  2258088 ttaagcactttaaatggtaagttttaaatgaaaagttgtgtattaaatacattaaaaattgtaatgattaactttt 2258163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 33067603 - 33067536
Alignment:
Q  107 tttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||||||||||||||||||||||||| || ||||||| ||||||| |||||||||||| ||||||    
T  33067603 tttaaatagtaagttttaaatgaaaagttttgtattgaatgcattagacattgtaataattgactttt 33067536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 35902040 - 35901965
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||| |||||||| |||||||| ||||||||||| || ||||||| |||| ||||||||||||||| ||||||    
T  35902040 ttaagcattttaaataataagtttttaatgaaaagttctgtattgaatgcattggaaattgtaataattgactttt 35901965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 174
Target Start/End: Complemental strand, 33013163 - 33013079
Alignment:
Q  90 gggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||  ||||||||||||| ||||||||| |  ||||||||||||| ||||| |||||| |||||||||||| || ||||||    
T  33013163 gggcactctttaagcactttaattagtaagttctttatgaaaagttgtgtattgagtacattggaaattgtaatagttgactttt 33013079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 27801223 - 27801298
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||||||||||||||||||||| ||| |||||||||| | ||||| ||||  ||||||||||| || ||||||    
T  27801223 ttaagcactttaaatagtaagtttttaataaaaagttgtgtaatgaatgcattgaaaattgtaatagttgactttt 27801298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 42636363 - 42636438
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||||||||||| ||||||||| |||||||||||||| ||| ||| ||||  ||||||||||| || ||||||    
T  42636363 ttaagcactttaaatggtaagtttttaatgaaaagttgtgtattaaatgcattgtaaattgtaatagttgactttt 42636438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 3146149 - 3146070
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaata----cattagaaattgtaataattaactttt 174  Q
    ||||||||||||||||||||||||| ||||||| | ||||||||||||     |||| |||||||||||| |||||||||    
T  3146149 ttaagcactttaaatagtaagtttttaatgaaacggtgtgcattgaatgaatgcattggaaattgtaatagttaactttt 3146070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 36355954 - 36356019
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaata 164  Q
    ||||| ||||||||| ||||||||| |||||||||||||| ||| ||| |||||||||||| ||||    
T  36355954 ttaagtactttaaatggtaagtttttaatgaaaagttgtgtattaaatgcattagaaattgcaata 36356019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 28207726 - 28207658
Alignment:
Q  106 ctttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||| | ||||||| |||||||||||||| ||||||| |||| |||||||||||| || ||||||    
T  28207726 ctttaaatggaaagtttttaatgaaaagttgtgtattgaatgcattggaaattgtaatagttgactttt 28207658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 37427300 - 37427232
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataatt 167  Q
    ||||||||||||||| ||||| ||| |||||||||||| | ||||| ||||||  ||||||||||||||    
T  37427300 ttaagcactttaaatggtaagattttaatgaaaagttgagtattgattacattgaaaattgtaataatt 37427232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 1135270 - 1135195
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||| |||||||||| ||||||||| || ||||||||||  ||||||||||||  ||||||||||| || ||||||    
T  1135270 ttaaacactttaaatggtaagtttttaaggaaaagttgtatattgaatacattgaaaattgtaatagttgactttt 1135195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 24695855 - 24695781
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||| |||||||||||||||||||| ||| |||||||||| ||| | | ||||||||||||||||| || ||||||    
T  24695855 ttaaacactttaaatagtaagtttt-aataaaaagttgtgtattcactgcattagaaattgtaatagttgactttt 24695781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 12684491 - 12684556
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaata 164  Q
    |||||||||||||||| ||| |||| ||| ||||||| || | ||||| |||||||||||||||||    
T  12684491 ttaagcactttaaataataaatttttaattaaaagttttgtaatgaatgcattagaaattgtaata 12684556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 26750659 - 26750607
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacatt 151  Q
    ||||||||||||||||||||| ||| |||||||| || |||||||||| ||||    
T  26750659 ttaagcactttaaatagtaagattttaatgaaaaattatgcattgaatgcatt 26750607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 1369856 - 1369931
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||||||||| || ||||||||| |||||||||| |  ||||||| |||| |||||||| ||| || ||||||    
T  1369856 ttaagcactttaattaataagttttatatgaaaagttatctattgaatgcattggaaattgtgatagttgactttt 1369931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 17081392 - 17081443
Alignment:
Q  123 taaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||||||||||||||| | | ||||||||||||||||| || ||||||    
T  17081392 taaatgaaaagttgtgcattcattgcattagaaattgtaatagttgactttt 17081443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 4384133 - 4384197
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaata 164  Q
    |||||||||||||||  ||| |||| ||||||| |||||| ||||||| |||| ||||||||||||    
T  4384133 ttaagcactttaaatgataaatttttaatgaaa-gttgtgtattgaatgcattggaaattgtaata 4384197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 33949547 - 33949612
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaata 164  Q
    |||| |||||||| ||||||||| |  ||||||||||||| ||||| | |||| ||||||||||||    
T  33949547 ttaaacactttaattagtaagttatttatgaaaagttgtgtattgagtgcatttgaaattgtaata 33949612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 884525 - 884458
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataatt 167  Q
    ||||||||||||||| | ||||||| |||||||| ||||| ||| ||| ||||  ||||||||||||||    
T  884525 ttaagcactttaaattgaaagtttttaatgaaaaattgtgtattaaat-cattgaaaattgtaataatt 884458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 35777696 - 35777771
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  35777696 ttaagcactttaaatggtaagtttttaatgaaaagttgtgtattgaatgcattagaaattgtaatagttaactttt 35777771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 31429386 - 31429321
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaata 164  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||| |||| ||||||||||||    
T  31429386 ttaagcactttaattagtaagttttaaatgaaaagttgtgtattgaatgcattggaaattgtaata 31429321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 47995734 - 47995809
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||||||||||| ||||||||| ||||||||||| || ||||||| ||||  |||||||||||||||||||||    
T  47995734 ttaagcactttaaattgtaagtttttaatgaaaagttatgtattgaatgcattgaaaattgtaataattaactttt 47995809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 7852532 - 7852616
Alignment:
Q  90 gggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||  ||||||||||||||||||||||||| |||||||||||||| ||| ||| ||||  ||||||||||| |||| ||||    
T  7852532 gggcactctttaagcactttaaatagtaagtttttaatgaaaagttgtgtattaaatgcattgaaaattgtaatagttaattttt 7852616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 8297980 - 8297917
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaa 162  Q
    ||||||||||||||||||||||||| |||||||| ||||| ||||||| |||| ||||||||||    
T  8297980 ttaagcactttaaatagtaagtttttaatgaaaaattgtgtattgaatgcattggaaattgtaa 8297917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 50341864 - 50341939
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||||||| ||||||| ||||||||||||||||||| ||||||| | || |||||||||||| || ||||||    
T  50341864 ttaagcactttatatagtaaattttaaatgaaaagttgtgtattgaatgcgttggaaattgtaatagttgactttt 50341939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 45900137 - 45900220
Alignment:
Q  90 gggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaacttt 173  Q
    |||||||  ||||||||||||| |||||||||| | ||||||||||||| ||||||| |||| |||||||| ||| || |||||    
T  45900137 gggcactctttaagcactttaattagtaagtttcatatgaaaagttgtgtattgaatgcattggaaattgtgatagttgacttt 45900220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 50427098 - 50427022
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaacttttc 175  Q
    |||| ||||||||||||||| |||| ||||||||||||||  |||| | |||| |||||||||||| || |||||||    
T  50427098 ttaaacactttaaatagtaaatttttaatgaaaagttgtgtgttgattgcattggaaattgtaatagttgacttttc 50427022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 53014202 - 53014278
Alignment:
Q  98 gttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||||||||||| ||| ||||| ||| |||||||||| |||||||  ||| |||||||||||| |||| ||||    
T  53014202 gttaagcactttaaatggtatgtttttaataaaaagttgtgtattgaatgtattggaaattgtaatagttaattttt 53014278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 7444382 - 7444457
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||| ||||||||||| |||||||| || ||||||||||| ||||||| ||||  ||||||||||| || ||||||    
T  7444382 ttaaacactttaaatactaagtttttaaagaaaagttgtgtattgaatgcattgaaaattgtaatagttgactttt 7444457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 13585258 - 13585321
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaa 162  Q
    ||||||||||||||| |||||||||| |||||||||| || | ||||||||||  |||||||||    
T  13585258 ttaagcactttaaatggtaagttttatatgaaaagttatgtaatgaatacattgaaaattgtaa 13585321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 27953046 - 27953113
Alignment:
Q  107 tttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||| ||||||||| || ||||||||||| ||||||| ||||  ||||||||||| |||||||||    
T  27953046 tttaaatggtaagtttttaacgaaaagttgtgtattgaatgcattgaaaattgtaatagttaactttt 27953113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 41462158 - 41462083
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||| ||||||||||||||||| |||||||| || || ||| ||| ||| ||||||||||||| || ||||||    
T  41462158 ttaagcattttaaatagtaagtttttaatgaaaaattatgtattaaatgcataagaaattgtaatagttgactttt 41462083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 51835023 - 51834948
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||| ||||||||||||||| |||| |||||||||||||| ||| ||| |||| |||||| ||||| || ||||||    
T  51835023 ttaaacactttaaatagtaaatttttaatgaaaagttgtgtatttaatgcattggaaattataatagttgactttt 51834948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 34391704 - 34391770
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataa 165  Q
    |||| ||||| |||||||||||||| ||| |||||||||| ||||| | |||| |||||||||||||    
T  34391704 ttaaacacttaaaatagtaagtttttaataaaaagttgtgtattgattgcattggaaattgtaataa 34391770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 8261215 - 8261154
Alignment:
Q  101 aagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaa 162  Q
    ||||||||||||||||||||||| ||||||||||| || ||| ||| ||||  |||||||||    
T  8261215 aagcactttaaatagtaagtttttaatgaaaagttatgtattaaatgcattgaaaattgtaa 8261154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 8274632 - 8274571
Alignment:
Q  101 aagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaa 162  Q
    ||||||||||||||||||||||| ||||||||||| || ||| ||| ||||  |||||||||    
T  8274632 aagcactttaaatagtaagtttttaatgaaaagttatgtattaaatgcattgaaaattgtaa 8274571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 23605659 - 23605703
Alignment:
Q  94 acttgttaagcactttaaatagtaagttttaaatgaaaagttgtg 138  Q
    |||| ||||||||||||||| ||||||||| ||||||||||||||    
T  23605659 actttttaagcactttaaatggtaagtttttaatgaaaagttgtg 23605703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 24175387 - 24175471
Alignment:
Q  90 gggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||  ||||||||||||||| |||||||||  | ||||||||||| ||| ||| ||||  ||||||||||| || ||||||    
T  24175387 gggcactctttaagcactttaaatggtaagttttgtacgaaaagttgtgtattaaatgcatttaaaattgtaatagtttactttt 24175471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 24229643 - 24229718
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||||||||||||  ||||||| |||||||| ||||| ||| ||| ||||  ||||||| |||||| ||||||    
T  24229643 ttaagcactttaaataaaaagtttttaatgaaaaattgtgtattaaatgcattgaaaattgtgataatttactttt 24229718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 25115261 - 25115335
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||| |||||||||||||||||||| | | |||||||||| ||| | | |||| |||||||||||| |||||||||    
T  25115261 ttaaacactttaaatagtaagttttta-taaaaagttgtgtattcactgcattggaaattgtaatagttaactttt 25115335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 36702876 - 36702818
Alignment:
Q  116 taagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||| |||||||| ||||| ||||||| ||||  |||||||||||||| ||||||    
T  36702876 taagtttttaatgaaaaattgtgtattgaatgcattgaaaattgtaataattgactttt 36702818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 49400721 - 49400656
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaata 164  Q
    ||||||||||||||||  ||  ||| |||||||||| ||| ||| |||||||| ||||||||||||    
T  49400721 ttaagcactttaaataacaaaattttaatgaaaagtcgtgtattaaatacattggaaattgtaata 49400656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 2864251 - 2864176
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||| |||| |||||||||||| || ||||||    
T  2864251 ttaagcactttaaatagtaagtttttaatgaaaagttgtgtattgaatgcattggaaattgtaatagttgactttt 2864176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 174
Target Start/End: Original strand, 43397005 - 43397087
Alignment:
Q  92 gcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||| ||| ||| |||| |||||| ||||| || ||||||    
T  43397005 gcactcgttaaacactttaaatagtaagtttttaatgaaaagttgtgtattaaatgcattggaaattataatagttgactttt 43397087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 40460725 - 40460788
Alignment:
Q  104 cactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataatt 167  Q
    |||||||||||||||||||| |||||||| ||||  |||||||| ||| |||| ||||||||||    
T  40460725 cactttaaatagtaagtttttaatgaaaaattgtatattgaataaattggaaactgtaataatt 40460788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 174
Target Start/End: Complemental strand, 39150700 - 39150616
Alignment:
Q  90 gggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||  ||||||||||||| ||||||| ||| |||||||| || || ||||||| ||||  ||||||||||| || ||||||    
T  39150700 gggcactctttaagcactttaactagtaagattttaatgaaaatttatgtattgaatgcattgtaaattgtaatagttgactttt 39150616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 34409838 - 34409775
Alignment:
Q  103 gcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataatt 167  Q
    ||||||||||| ||||||||| ||||||||  |||| ||||||| |||| |||||| ||||||||    
T  34409838 gcactttaaatggtaagtttttaatgaaaa-atgtgtattgaatgcattggaaattataataatt 34409775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 6e-19; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 28770586 - 28770510
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaacttttc 175  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||||||| |||| |||||||||||| || |||||||    
T  28770586 ttaagcactctaaatagtaagtttttaatgaaaagttgtgtattgaatgcattggaaattgtaatagttgacttttc 28770510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 28663127 - 28663211
Alignment:
Q  90 gggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||  ||||||||||||||||||||| ||| |||||||| ||||| ||||||| ||||  ||||||||||| || ||||||    
T  28663127 gggcactctttaagcactttaaatagtaaggttttaatgaaaaattgtgtattgaatgcattgaaaattgtaatagttgactttt 28663211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 39320979 - 39321054
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||||||||| |||||||||||  || |||||||||| ||||||||||||  ||||||||||| || ||||||    
T  39320979 ttaagcactttaattagtaagttttttattaaaagttgtgtattgaatacattgaaaattgtaatagttgactttt 39321054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 43224084 - 43224147
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaa 162  Q
    ||||||||||||||||| ||||||| |||||||||||||| |||  ||||||| ||||||||||    
T  43224084 ttaagcactttaaatagcaagtttttaatgaaaagttgtgtattacatacattggaaattgtaa 43224147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 174
Target Start/End: Complemental strand, 27123392 - 27123308
Alignment:
Q  90 gggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||  ||||||||||||||| ||||||||| || ||||||||||| | | ||| |||| |||||||||||| || ||||||    
T  27123392 gggcactctttaagcactttaaatggtaagtttttaacgaaaagttgtgtacttaatgcattggaaattgtaatagttgactttt 27123308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 174
Target Start/End: Complemental strand, 44537459 - 44537375
Alignment:
Q  90 gggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||  ||||||||||||||||||||||||| ||||||||||| || |||  ||||| | |||||| ||||| || ||||||    
T  44537459 gggcactctttaagcactttaaatagtaagtttttaatgaaaagttatgtattatatacaatggaaattataatagttgactttt 44537375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 7653685 - 7653610
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||||||||| |||||||||| |||||||||||||| | |||||  ||| |||||| ||||| || ||||||    
T  7653685 ttaagcactttaaaaagtaagtttttaatgaaaagttgtgtaatgaatgaattggaaattataatagttgactttt 7653610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 9718991 - 9719054
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaa 162  Q
    ||||||||||||||| |||||||||| |||||||||| || | ||||||||||  |||||||||    
T  9718991 ttaagcactttaaatggtaagttttatatgaaaagttatgtaatgaatacattgaaaattgtaa 9719054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 164
Target Start/End: Complemental strand, 43234908 - 43234834
Alignment:
Q  90 gggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaata 164  Q
    |||||||  |||||||||||||||||||| |||| ||||||||||| || |||||||  | | ||||||||||||    
T  43234908 gggcactctttaagcactttaaatagtaaatttttaatgaaaagttatgtattgaatgtaatggaaattgtaata 43234834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 14651378 - 14651450
Alignment:
Q  90 gggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaa 162  Q
    |||||||  |||||||||| |||||||| ||||| |||||||||||||| | ||| | |||| ||||||||||    
T  14651378 gggcactctttaagcacttaaaatagtaggtttttaatgaaaagttgtgtaatgattgcattggaaattgtaa 14651450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 35496561 - 35496645
Alignment:
Q  90 gggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||  |||| |||||||||| ||||||||| |||||||| ||||| | ||||| ||||  ||||||||||| || ||||||    
T  35496561 gggcactctttaaacactttaaatggtaagtttttaatgaaaaattgtgtaatgaatgcattgaaaattgtaatagttgactttt 35496645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 25886279 - 25886205
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaacttt 173  Q
    |||| |||||||||| |||||||||| ||||||||||||| ||| |||  |||  ||||||||||| || |||||    
T  25886279 ttaaacactttaaatggtaagttttatatgaaaagttgtgtattaaatgtattgaaaattgtaatagttgacttt 25886205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 32051331 - 32051364
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaa 132  Q
    ||||||||||||||||||||||||| ||||||||    
T  32051331 ttaagcactttaaatagtaagtttttaatgaaaa 32051364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 44592945 - 44592900
Alignment:
Q  129 aaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||||| ||||||||||||  ||||||||||| |||||||||    
T  44592945 aaaagttgtgtattgaatacattgaaaattgtaatagttaactttt 44592900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 174
Target Start/End: Complemental strand, 35731405 - 35731321
Alignment:
Q  90 gggcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||  ||||||||||||| ||||||||| |  || |||||||||| ||| | | |||| |||||||||||| || ||||||    
T  35731405 gggcactctttaagcactttaattagtaagttctttataaaaagttgtgtattaagtgcattggaaattgtaatagttgactttt 35731321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 32823786 - 32823710
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaacttttc 175  Q
    ||||||||||||||||  ||||||| |||||||||||||| ||||||| ||||  |||||||||||||| |||||||    
T  32823786 ttaagcactttaaataacaagtttttaatgaaaagttgtgtattgaatgcattgaaaattgtaataattgacttttc 32823710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 31855163 - 31855088
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||||||||||||||||||||| |||||||| ||||  ||||||| |||| |||||||||||| || ||||||    
T  31855163 ttaagcactttaaatagtaagtttttaatgaaaaattgtatattgaatgcattggaaattgtaatagttgactttt 31855088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 30801850 - 30801774
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaacttttc 175  Q
    ||||||||||||||||| ||||||| ||| |||||||||| ||||||| ||||  ||||| ||||| ||| ||||||    
T  30801850 ttaagcactttaaatagcaagtttttaattaaaagttgtgtattgaatgcattgaaaattataatacttagcttttc 30801774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 174
Target Start/End: Complemental strand, 9762921 - 9762836
Alignment:
Q  90 gggcacttgttaagcactttaaatagtaagtttt-aaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||  |||| |||||||||| |||| |||| ||||||||||||||| | |||||  |||||||||| |||||||| ||||||    
T  9762921 gggcactctttaatcactttaaatggtaaatttttaaatgaaaagttgtgtactgaatgtattagaaattataataattgactttt 9762836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 3766383 - 3766311
Alignment:
Q  102 agcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||||||||  ||||||||| |||||||||| || | |||||  |||| |||||||||||||| ||||||    
T  3766383 agcactttaaatgataagttttatatgaaaagttatgtaatgaatgtattataaattgtaataattgactttt 3766311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 17215680 - 17215755
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||||||||||| ||||||||| ||| |||| ||||  ||||||| ||||  ||||||||||| || ||||||    
T  17215680 ttaagcactttaaatggtaagtttttaataaaaaattgtttattgaatgcattgaaaattgtaatagttgactttt 17215755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 1841084 - 1841027
Alignment:
Q  107 tttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaata 164  Q
    |||||||  |||||||| ||| |||||||||| ||||||| |||| ||||||||||||    
T  1841084 tttaaatgataagtttttaattaaaagttgtgtattgaatgcattggaaattgtaata 1841027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 5446662 - 5446722
Alignment:
Q  102 agcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaa 162  Q
    |||||||||||||| || |||| ||| |||||| ||||||||||| ||||  |||||||||    
T  5446662 agcactttaaatagcaattttttaattaaaagtggtgcattgaatgcattgaaaattgtaa 5446722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 29083896 - 29083972
Alignment:
Q  99 ttaagcactttaaa-tagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||||||||| ||||||||||| | |||||||||||| ||| ||| ||||| ||||||||||| |||||||||    
T  29083896 ttaagcactttaaaatagtaagtttttattgaaaagttgtgtattaaatgcattaaaaattgtaatagttaactttt 29083972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 40673544 - 40673478
Alignment:
Q  98 gttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaata 164  Q
    ||||||||||||||||  |||||||| || ||||||| ||| |||||||| ||||||||||||||||    
T  40673544 gttaagcactttaaatgataagtttttaaagaaaagtagtgtattgaatatattagaaattgtaata 40673478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 47639004 - 47638929
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||| ||||| ||||||||| |  ||||||| ||||| ||||| | ||||| ||||||||||| |||||||||    
T  47639004 ttaagcattttaattagtaagttctttatgaaaaattgtgtattgagtgcattaaaaattgtaatagttaactttt 47638929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 51351386 - 51351311
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||||||||| |||||||||| |||||||| ||||| ||| |||  ||| |||||| ||||| | |||||||    
T  51351386 ttaagcactttaaaaagtaagtttttaatgaaaaattgtgtattaaatgtattggaaattataatactaaactttt 51351311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 24791588 - 24791530
Alignment:
Q  116 taagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||| ||||||||||| || ||||||||||||  ||||||||||| || ||||||    
T  24791588 taagtttttaatgaaaagttatgtattgaatacattgaaaattgtaatagttgactttt 24791530  T

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Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 52249442 - 52249360
Alignment:
Q  92 gcacttgttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||| ||||||||||||| || |||||| |  |  |||||||||  |||||||| |||||| ||||||||| |||||||||    
T  52249442 gcactttttaagcactttaattaataagttatttaaaaaaagttgtatattgaatatattagagattgtaatagttaactttt 52249360  T

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Target: scaffold0268 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 20246 - 20320
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||||||||||||||  |||||||| | |||||||||||| ||| ||| |||| |||||||||||| |||||||||    
T  20246 ttaagcactttaaatgataagttttta-tgaaaagttgtgtatttaatgcatttgaaattgtaatagttaactttt 20320  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 62522 - 62597
Alignment:
Q  99 ttaagcactttaaatagtaagttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    ||||||||||||||||||||||||| ||| |||| || || ||||||| ||||  |||| |||||| || ||||||    
T  62522 ttaagcactttaaatagtaagtttttaataaaaaattatgtattgaatgcattgaaaatcgtaatagttgactttt 62597  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 335866 - 335920
Alignment:
Q  120 ttttaaatgaaaagttgtgcattgaatacattagaaattgtaataattaactttt 174  Q
    |||| |||||||||||||| || |||||||||  ||||| |||||||||||||||    
T  335866 tttttaatgaaaagttgtgtatcgaatacattgaaaattataataattaactttt 335920  T

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