View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1137_low_90 (Length: 372)
Name: NF1137_low_90
Description: NF1137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1137_low_90 |
 | |
|
| [»] scaffold0014 (5 HSPs) |
| | |
|
| [»] scaffold1270 (2 HSPs) |
| | |
|
| [»] scaffold1635 (2 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 304; Significance: 1e-171; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 13 - 340
Target Start/End: Original strand, 3714770 - 3715097
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
3714770 |
gagactgtacttgaaccaaatttagacaattttgtactagatgccattggtgagggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
3714869 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3714870 |
tgatatatttggtttgagagagaagtaaagagtcagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
3714969 |
T |
|
| Q |
213 |
ctcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagtaaaga |
312 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3714970 |
ctcagaattgagctgatgaactagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagtaaaga |
3715069 |
T |
|
| Q |
313 |
tgatttcaatttctcaaaccatgctctg |
340 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
3715070 |
tgatttcaatttctcaaaccatgctctg |
3715097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 13 - 307
Target Start/End: Original strand, 48509850 - 48510144
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
48509850 |
gagactgtacttgaaccaaatttagacaattttgtactagatgccattggtgaaggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
48509949 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
212 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48509950 |
tgatatatttggtttgagaaagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
48510049 |
T |
|
| Q |
213 |
ctcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48510050 |
ctcagaattgagctgatgaactagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
48510144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 13 - 307
Target Start/End: Original strand, 48724292 - 48724586
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
48724292 |
gagactgtacttgaaccaaatttagacaattttgtactagatgccattggtgaaggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
48724391 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
212 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48724392 |
tgatatatttggtttgagaaagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
48724491 |
T |
|
| Q |
213 |
ctcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48724492 |
ctcagaattgagctgatgaactagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
48724586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 13 - 307
Target Start/End: Complemental strand, 42109046 - 42108752
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
42109046 |
gagactgtacttgaaccaaatttagacaattttgtactggatgccattggtgagggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
42108947 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42108946 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
42108847 |
T |
|
| Q |
213 |
ctcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
|||| ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42108846 |
ctcagaattgagttgatgaactagattctgaatagccaattttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
42108752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 340
Target Start/End: Complemental strand, 42108689 - 42108654
Alignment:
| Q |
305 |
agtaaagatgatttcaatttctcaaaccatgctctg |
340 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
42108689 |
agtaaagatgatttcaatatctcaaaccatgctctg |
42108654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 340
Target Start/End: Original strand, 48510207 - 48510242
Alignment:
| Q |
305 |
agtaaagatgatttcaatttctcaaaccatgctctg |
340 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
48510207 |
agtaaagatgatttcaatctctcaaaccatgctctg |
48510242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 340
Target Start/End: Original strand, 48724649 - 48724684
Alignment:
| Q |
305 |
agtaaagatgatttcaatttctcaaaccatgctctg |
340 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
48724649 |
agtaaagatgatttcaatctctcaaaccatgctctg |
48724684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 267; Significance: 1e-149; HSPs: 5)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 13 - 307
Target Start/End: Complemental strand, 163238 - 162944
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
163238 |
gagactgtacttgaaccaaatttagacaattttgtactagatgccattggtgaaggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
163139 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
212 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
163138 |
tgatatatttggtttgagaaagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
163039 |
T |
|
| Q |
213 |
ctcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
163038 |
ctcagaattgagctgatgaactagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
162944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 13 - 307
Target Start/End: Complemental strand, 172540 - 172246
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
172540 |
gagactgtacttgaaccaaatttagacaattttgtactagatgccattggtgaaggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
172441 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
212 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
172440 |
tgatatatttggtttgagaaagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
172341 |
T |
|
| Q |
213 |
ctcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
172340 |
ctcagaattgagctgatgaactagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
172246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 68 - 307
Target Start/End: Complemental strand, 177322 - 177083
Alignment:
| Q |
68 |
gcatgctattagtattaatcatgttagctttctgaagaaggtccttgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctc |
167 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
177322 |
gcatgctattagcattaatcatgttagctttctgaagaaggtccttgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctc |
177223 |
T |
|
| Q |
168 |
tatgccgagaaaataatctagtatacccaaatctttaagggagaactcataattgagctgatgaattagattctgaatagccagttttgagtttccagtg |
267 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||| ||||||||||||| || |
|
|
| T |
177222 |
tatgccgagaaaataatctactatacccaaatctttaagggagaactcagaattgagctgatggactagattctgaatagccaattttgagtttccaatg |
177123 |
T |
|
| Q |
268 |
atgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
177122 |
atgataatatcatcaacataaaccaatataaaaatgcagt |
177083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 340
Target Start/End: Complemental strand, 162881 - 162846
Alignment:
| Q |
305 |
agtaaagatgatttcaatttctcaaaccatgctctg |
340 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
162881 |
agtaaagatgatttcaatctctcaaaccatgctctg |
162846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 340
Target Start/End: Complemental strand, 172183 - 172148
Alignment:
| Q |
305 |
agtaaagatgatttcaatttctcaaaccatgctctg |
340 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
172183 |
agtaaagatgatttcaatctctcaaaccatgctctg |
172148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 267; Significance: 1e-149; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 13 - 307
Target Start/End: Complemental strand, 29655646 - 29655352
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
29655646 |
gagactgtacttgaaccaaatttagacaattttgtactagatgccattggtgaaggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
29655547 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
212 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29655546 |
tgatatatttggtttgagaaagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
29655447 |
T |
|
| Q |
213 |
ctcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29655446 |
ctcagaattgagctgatgaactagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
29655352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 340
Target Start/End: Complemental strand, 29655289 - 29655254
Alignment:
| Q |
305 |
agtaaagatgatttcaatttctcaaaccatgctctg |
340 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
29655289 |
agtaaagatgatttcaatctctcaaaccatgctctg |
29655254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 267; Significance: 1e-149; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 13 - 307
Target Start/End: Original strand, 36675381 - 36675675
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
36675381 |
gagactgtacttgaaccaaatttagacaattttgtactagatgccattggtgaaggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
36675480 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
212 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36675481 |
tgatatatttggtttgagaaagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
36675580 |
T |
|
| Q |
213 |
ctcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36675581 |
ctcagaattgagctgatgaactagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
36675675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 13 - 307
Target Start/End: Complemental strand, 36666394 - 36666100
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
36666394 |
gagactgtacttgaaccaaatttagacaattttgtactagatgccattggtgaaggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
36666295 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
212 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36666294 |
tgatatatttggtttgagaaagaagtaaagagccagatggtgagtgatgcacctctatgccaagaaaataatctagtatacccaaatctttaagggagaa |
36666195 |
T |
|
| Q |
213 |
ctcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36666194 |
ctcagaattgagctgatgaactagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
36666100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 13 - 307
Target Start/End: Complemental strand, 43563854 - 43563560
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||| ||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
43563854 |
gagactgtacttgaaccaaatttagacagttttgtgctagatgccataggtgagggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
43563755 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
212 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
43563754 |
tgatatatttggtttgagagagaagcaaagagccagatggtgagtgatgcacctctatgccaagaaaataatctactatacccaaatctttaagggagaa |
43563655 |
T |
|
| Q |
213 |
ctcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
|||| ||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43563654 |
ctcaaaattgagctgatgaactagattattaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
43563560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 340
Target Start/End: Complemental strand, 36666037 - 36666002
Alignment:
| Q |
305 |
agtaaagatgatttcaatttctcaaaccatgctctg |
340 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
36666037 |
agtaaagatgatttcaatctctcaaaccatgctctg |
36666002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 340
Target Start/End: Original strand, 36675738 - 36675773
Alignment:
| Q |
305 |
agtaaagatgatttcaatttctcaaaccatgctctg |
340 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
36675738 |
agtaaagatgatttcaatctctcaaaccatgctctg |
36675773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 338
Target Start/End: Complemental strand, 43563497 - 43563464
Alignment:
| Q |
305 |
agtaaagatgatttcaatttctcaaaccatgctc |
338 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| |
|
|
| T |
43563497 |
agtaaagatgatttcaatctctcaaaccatgctc |
43563464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 267; Significance: 1e-149; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 13 - 307
Target Start/End: Original strand, 38324109 - 38324403
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
38324109 |
gagactgtacttgaaccaaatttagacaattttgtactagatgccattggtgaaggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
38324208 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
212 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38324209 |
tgatatatttggtttgagaaagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
38324308 |
T |
|
| Q |
213 |
ctcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38324309 |
ctcagaattgagctgatgaactagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
38324403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 13 - 307
Target Start/End: Complemental strand, 46077267 - 46076972
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
46077267 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggtgagggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
46077168 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctc-tatgccgagaaaataatctagtatacccaaatctttaagggaga |
211 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
46077167 |
tgatatatttggtttgaaagagaagtaaagagccagatggtgagtgatgcacctcttatgccgagaaaataatctagcatacccaaatctttaagggaga |
46077068 |
T |
|
| Q |
212 |
actcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46077067 |
actcagaattgagctgatgaactagattctgaatagccaattttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
46076972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 13 - 307
Target Start/End: Complemental strand, 55492483 - 55492189
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
55492483 |
gagactgtacttgaaccaaatttagacaattttgtactagatgtcattggtgagggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
55492384 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
212 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55492383 |
tcatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
55492284 |
T |
|
| Q |
213 |
ctcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
|||| ||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55492283 |
ctcagaattgagctgatgaactagattctaaatagccaattttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
55492189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 13 - 290
Target Start/End: Original strand, 33823841 - 33824118
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
33823841 |
gagactgtacttgaaccaaatttagacaattttgtactagatgccattggtgagggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
33823940 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
212 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33823941 |
tgaaatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
33824040 |
T |
|
| Q |
213 |
ctcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaac |
290 |
Q |
| |
|
|| | ||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
33824041 |
cttagaattgagctgatgaactaaattttgaatagccagttttgagtttccagtgatgataatatcatcaacaaaaac |
33824118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 307
Target Start/End: Original strand, 33824119 - 33824158
Alignment:
| Q |
268 |
atgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
33824119 |
atgataatatcatcaatataaaccaatataaaaatgcagt |
33824158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 340
Target Start/End: Original strand, 38324466 - 38324501
Alignment:
| Q |
305 |
agtaaagatgatttcaatttctcaaaccatgctctg |
340 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
38324466 |
agtaaagatgatttcaatctctcaaaccatgctctg |
38324501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 337
Target Start/End: Complemental strand, 46076909 - 46076877
Alignment:
| Q |
305 |
agtaaagatgatttcaatttctcaaaccatgct |
337 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |
|
|
| T |
46076909 |
agtaaagatgatttcaatctctcaaaccatgct |
46076877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 267; Significance: 1e-149; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 13 - 307
Target Start/End: Complemental strand, 12508591 - 12508297
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
12508591 |
gagactgtacttgaaccaaatttagacaattttgtactagatgccattggtgaaggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
12508492 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
212 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12508491 |
tgatatatttggtttgagaaagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
12508392 |
T |
|
| Q |
213 |
ctcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12508391 |
ctcagaattgagctgatgaactagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
12508297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 13 - 307
Target Start/End: Original strand, 14677335 - 14677629
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
14677335 |
gagactgtacttgaaccaaatttagacaattttgtactagatgccattggtgaaggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
14677434 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
212 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14677435 |
tgatatatttggtttgagaaagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
14677534 |
T |
|
| Q |
213 |
ctcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14677535 |
ctcagaattgagctgatgaactagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
14677629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 13 - 307
Target Start/End: Complemental strand, 39591031 - 39590737
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
39591031 |
gagactgtacttgaaccaaatttagacaattttgtactagatgccattggtgaaggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
39590932 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
212 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39590931 |
tgatatatttggtttgagaaagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
39590832 |
T |
|
| Q |
213 |
ctcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39590831 |
ctcagaattgagctgatgaactagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
39590737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 340
Target Start/End: Complemental strand, 12508234 - 12508199
Alignment:
| Q |
305 |
agtaaagatgatttcaatttctcaaaccatgctctg |
340 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
12508234 |
agtaaagatgatttcaatctctcaaaccatgctctg |
12508199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 340
Target Start/End: Original strand, 14677692 - 14677727
Alignment:
| Q |
305 |
agtaaagatgatttcaatttctcaaaccatgctctg |
340 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
14677692 |
agtaaagatgatttcaatctctcaaaccatgctctg |
14677727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 340
Target Start/End: Complemental strand, 39590674 - 39590639
Alignment:
| Q |
305 |
agtaaagatgatttcaatttctcaaaccatgctctg |
340 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
39590674 |
agtaaagatgatttcaatctctcaaaccatgctctg |
39590639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 267; Significance: 1e-149; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 13 - 307
Target Start/End: Complemental strand, 29890709 - 29890415
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
29890709 |
gagactgtacttgaaccaaatttagacaattttgtactagatgccattggtgaaggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
29890610 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
212 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29890609 |
tgatatatttggtttgagaaagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
29890510 |
T |
|
| Q |
213 |
ctcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29890509 |
ctcagaattgagctgatgaactagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
29890415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 13 - 307
Target Start/End: Original strand, 52605461 - 52605755
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
52605461 |
gagactgtacttgaaccaaatttagacaattttgtactagatgccattggtgaaggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
52605560 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
212 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52605561 |
tgatatatttggtttgagaaagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
52605660 |
T |
|
| Q |
213 |
ctcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52605661 |
ctcagaattgagctgatgaactagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
52605755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 20 - 307
Target Start/End: Complemental strand, 52889983 - 52889696
Alignment:
| Q |
20 |
tacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtccttgatata |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
52889983 |
tacttgaaccaaatttagacaattttgtactagatgtcattggtgagggcatgctattagcattaatcatattagctttctgaagaaggtccttgatata |
52889884 |
T |
|
| Q |
120 |
tttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaactcataa |
219 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |
|
|
| T |
52889883 |
tttggtttgagagagaagtaaagagctagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccagatctttaagggagaactcagaa |
52889784 |
T |
|
| Q |
220 |
ttgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52889783 |
ttgagctgatgaactagattttgaatagtcagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
52889696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 20 - 250
Target Start/End: Original strand, 51219229 - 51219459
Alignment:
| Q |
20 |
tacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtccttgatata |
119 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
51219229 |
tacttgaatcaaatttagacaattttgtactagatgccattggtgagggcatgctattagcattaatcatgttagctttctgaagaaggtcctagatata |
51219328 |
T |
|
| Q |
120 |
tttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaactcataa |
219 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
51219329 |
tttggtttgagagagaagtaaagagccaaatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttatgggagaactcagaa |
51219428 |
T |
|
| Q |
220 |
ttgagctgatgaattagattctgaatagcca |
250 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |
|
|
| T |
51219429 |
ttgagctgatgaactagattctgaatagcca |
51219459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 340
Target Start/End: Complemental strand, 29890352 - 29890317
Alignment:
| Q |
305 |
agtaaagatgatttcaatttctcaaaccatgctctg |
340 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
29890352 |
agtaaagatgatttcaatctctcaaaccatgctctg |
29890317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 340
Target Start/End: Original strand, 52605818 - 52605853
Alignment:
| Q |
305 |
agtaaagatgatttcaatttctcaaaccatgctctg |
340 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
52605818 |
agtaaagatgatttcaatctctcaaaccatgctctg |
52605853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 52889633 - 52889599
Alignment:
| Q |
305 |
agtaaagatgatttcaatttctcaaaccatgctct |
339 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |
|
|
| T |
52889633 |
agtaaagatgatttcaatctctcaaaccatgctct |
52889599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 265; Significance: 1e-148; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 13 - 309
Target Start/End: Complemental strand, 44201766 - 44201470
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
44201766 |
gagactgtacttgaaccaaatttagacaattttgtactagacgccattggtgaaggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
44201667 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
212 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44201666 |
tgatatatttggtttgagaaagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
44201567 |
T |
|
| Q |
213 |
ctcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagtaa |
309 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44201566 |
ctcagaattgagctgatgaactagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagtaa |
44201470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 340
Target Start/End: Complemental strand, 44201409 - 44201374
Alignment:
| Q |
305 |
agtaaagatgatttcaatttctcaaaccatgctctg |
340 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
44201409 |
agtaaagatgatttcaatctctcaaaccatgctctg |
44201374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1270 (Bit Score: 264; Significance: 1e-147; HSPs: 2)
Name: scaffold1270
Description:
Target: scaffold1270; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 13 - 307
Target Start/End: Original strand, 461 - 756
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
461 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggtgagggcatgctattagcattaatcatgttagctttctgaagaaggtcct |
560 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctc-tatgccgagaaaataatctagtatacccaaatctttaagggaga |
211 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
561 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctcttatgccgagaaaataatctagcatacccaaatctttaagggaga |
660 |
T |
|
| Q |
212 |
actcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
661 |
actcagaattgagctgatgaactagattctgaatagccaattttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1270; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 340
Target Start/End: Original strand, 819 - 854
Alignment:
| Q |
305 |
agtaaagatgatttcaatttctcaaaccatgctctg |
340 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
819 |
agtaaagatgatttcaatctctcaaaccatgctctg |
854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1635 (Bit Score: 248; Significance: 1e-137; HSPs: 2)
Name: scaffold1635
Description:
Target: scaffold1635; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 13 - 307
Target Start/End: Complemental strand, 1286 - 994
Alignment:
| Q |
13 |
gagactatacttgaaccaaatttagacaattttgtactagatgccattggcgagggcatgctattagtattaatcatgttagctttctgaagaaggtcct |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
1286 |
gagactgtacttgaaccaaatttagacaattttgtactagatgccattggtgatggcatgctattagcattaatcatgttagctttaagaagaaggtcct |
1187 |
T |
|
| Q |
113 |
tgatatatttggtttgagagagaagtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
212 |
Q |
| |
|
| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1186 |
tcatatatttggtttgagaga--agtaaagagccagatggtgagtgatgcacctctatgccgagaaaataatctagtatacccaaatctttaagggagaa |
1089 |
T |
|
| Q |
213 |
ctcataattgagctgatgaattagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
307 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1088 |
ctcagaattgagctgatgaactagattctgaatagccagttttgagtttccagtgatgataatatcatcaacataaaccaatataaaaatgcagt |
994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1635; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 340
Target Start/End: Complemental strand, 931 - 896
Alignment:
| Q |
305 |
agtaaagatgatttcaatttctcaaaccatgctctg |
340 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
931 |
agtaaagatgatttcaatctctcaaaccatgctctg |
896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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