View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1137_low_96 (Length: 365)

Name: NF1137_low_96
Description: NF1137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1137_low_96
NF1137_low_96
[»] chr7 (15 HSPs)
chr7 (33-286)||(45044013-45044273)
chr7 (322-365)||(15577877-15577920)
chr7 (312-365)||(48880954-48881007)
chr7 (326-365)||(15329272-15329311)
chr7 (326-365)||(45637711-45637750)
chr7 (327-365)||(3961979-3962017)
chr7 (327-365)||(4974762-4974800)
chr7 (327-365)||(24394972-24395010)
chr7 (327-365)||(42611811-42611849)
chr7 (324-365)||(18036975-18037016)
chr7 (326-365)||(37477107-37477146)
chr7 (326-357)||(42696082-42696113)
chr7 (327-365)||(20010124-20010162)
chr7 (327-365)||(34482835-34482873)
chr7 (325-365)||(35444556-35444596)
[»] chr5 (15 HSPs)
chr5 (326-365)||(14138667-14138706)
chr5 (325-365)||(3362776-3362816)
chr5 (324-364)||(13664639-13664679)
chr5 (325-365)||(38899753-38899793)
chr5 (326-365)||(2477635-2477674)
chr5 (326-365)||(6043538-6043577)
chr5 (326-365)||(8145374-8145413)
chr5 (327-365)||(3522033-3522071)
chr5 (327-365)||(11361158-11361196)
chr5 (327-365)||(12850801-12850839)
chr5 (326-365)||(4892201-4892240)
chr5 (327-365)||(22913081-22913119)
chr5 (327-365)||(25398238-25398276)
chr5 (327-365)||(33584356-33584394)
chr5 (327-364)||(12614761-12614798)
[»] chr2 (11 HSPs)
chr2 (326-365)||(13354845-13354884)
chr2 (325-365)||(35160755-35160795)
chr2 (322-365)||(7475535-7475578)
chr2 (326-364)||(9293604-9293642)
chr2 (327-365)||(21936081-21936119)
chr2 (330-364)||(40262714-40262748)
chr2 (328-365)||(10661888-10661925)
chr2 (325-364)||(14941394-14941433)
chr2 (326-365)||(23268089-23268128)
chr2 (330-365)||(31174861-31174896)
chr2 (327-365)||(33380207-33380245)
[»] chr8 (19 HSPs)
chr8 (325-363)||(41819807-41819845)
chr8 (326-365)||(1645992-1646031)
chr8 (326-365)||(15187559-15187598)
chr8 (326-365)||(32064744-32064783)
chr8 (326-365)||(42755069-42755108)
chr8 (327-365)||(24211580-24211618)
chr8 (327-365)||(32393858-32393896)
chr8 (327-365)||(34665382-34665420)
chr8 (326-365)||(6108260-6108299)
chr8 (326-365)||(17841877-17841916)
chr8 (326-365)||(26042143-26042182)
chr8 (327-358)||(30835080-30835111)
chr8 (326-365)||(39772828-39772867)
chr8 (326-365)||(40780156-40780195)
chr8 (327-365)||(20091828-20091866)
chr8 (327-365)||(35353041-35353079)
chr8 (328-365)||(14128865-14128902)
chr8 (336-365)||(38016980-38017009)
chr8 (328-364)||(27782145-27782181)
[»] chr3 (20 HSPs)
chr3 (327-365)||(8320611-8320649)
chr3 (323-365)||(22426371-22426413)
chr3 (325-365)||(42297351-42297391)
chr3 (326-365)||(2754716-2754755)
chr3 (326-365)||(3574554-3574593)
chr3 (326-365)||(11347267-11347306)
chr3 (327-365)||(3456064-3456102)
chr3 (327-365)||(6041884-6041922)
chr3 (327-365)||(19650927-19650965)
chr3 (327-365)||(37217080-37217118)
chr3 (327-365)||(48160905-48160943)
chr3 (328-365)||(9797056-9797093)
chr3 (326-365)||(3137441-3137480)
chr3 (326-365)||(24343546-24343585)
chr3 (326-365)||(33113792-33113831)
chr3 (326-365)||(33839530-33839569)
chr3 (326-365)||(34482937-34482976)
chr3 (327-365)||(30385011-30385049)
chr3 (330-364)||(40327878-40327912)
chr3 (326-358)||(47402630-47402662)
[»] chr4 (14 HSPs)
chr4 (324-365)||(31078846-31078887)
chr4 (325-365)||(33530715-33530755)
chr4 (326-365)||(4751445-4751484)
chr4 (326-365)||(10442816-10442855)
chr4 (326-365)||(23964492-23964531)
chr4 (327-365)||(2624837-2624875)
chr4 (327-365)||(22199261-22199299)
chr4 (327-365)||(36072947-36072985)
chr4 (327-365)||(49387915-49387953)
chr4 (328-365)||(7745139-7745176)
chr4 (326-365)||(21802349-21802388)
chr4 (326-365)||(24128238-24128277)
chr4 (326-365)||(24392666-24392705)
chr4 (326-365)||(47290065-47290104)
[»] chr6 (12 HSPs)
chr6 (326-365)||(6127274-6127313)
chr6 (326-365)||(23291111-23291150)
chr6 (326-365)||(28675147-28675186)
chr6 (326-365)||(33695354-33695393)
chr6 (326-365)||(33696695-33696734)
chr6 (326-360)||(2309455-2309489)
chr6 (327-365)||(17705492-17705530)
chr6 (326-365)||(18365600-18365639)
chr6 (326-365)||(18370864-18370903)
chr6 (327-365)||(17176048-17176086)
chr6 (327-365)||(25986930-25986968)
chr6 (330-362)||(8515755-8515787)
[»] chr1 (17 HSPs)
chr1 (326-365)||(18404441-18404480)
chr1 (326-365)||(25973413-25973452)
chr1 (327-365)||(40214988-40215026)
chr1 (327-364)||(52329319-52329356)
chr1 (326-365)||(16045825-16045864)
chr1 (326-365)||(19015403-19015442)
chr1 (326-365)||(25463675-25463714)
chr1 (325-364)||(34519756-34519795)
chr1 (325-364)||(51620978-51621017)
chr1 (327-365)||(9910320-9910358)
chr1 (324-354)||(10167412-10167442)
chr1 (327-365)||(32000294-32000332)
chr1 (327-365)||(36966735-36966773)
chr1 (327-365)||(37821861-37821899)
chr1 (327-365)||(44094698-44094736)
chr1 (331-364)||(27523054-27523087)
chr1 (324-365)||(41876469-41876510)
[»] scaffold0178 (1 HSPs)
scaffold0178 (327-365)||(11621-11659)
[»] scaffold0471 (1 HSPs)
scaffold0471 (326-365)||(12841-12880)
[»] scaffold0204 (1 HSPs)
scaffold0204 (326-365)||(4395-4434)
[»] scaffold0096 (1 HSPs)
scaffold0096 (326-365)||(41010-41049)
[»] scaffold0085 (1 HSPs)
scaffold0085 (327-365)||(47850-47888)
[»] scaffold0665 (1 HSPs)
scaffold0665 (328-365)||(3069-3106)


Alignment Details
Target: chr7 (Bit Score: 156; Significance: 8e-83; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 33 - 286
Target Start/End: Original strand, 45044013 - 45044273
Alignment:
Q  33 tcattagggtttgattacataccc-------gacatctatttagtctttcatnnnnnnnnnncatctatttagggttttttagatcaaaataatcttatt 125  Q
    ||||||||||||||||||||||||       |||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  45044013 tcattagggtttgattacatacccacaaaccgacatctatttagtctttcataaaaaaaaaacatctatttagggttttttagatcaaaataatcttatt 45044112  T
Q  126 ttgatataaattgattaattgatttagagattaatttaggctttgtttagatcaaaataaatgtaatttcgatgtaaattgatctagagacaannnnnnn 225  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  45044113 tcgatataaattgattaattgatttagagattaatttaggctttgtttagatcaaaataaatgtaatttcgatgtaaattgatctagagacaattttttt 45044212  T
Q  226 nagaaactttccnnnnnnncagacgtcattgttgtatatctccatcttctactaaaaatga 286  Q
     |||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  45044213 tagaaactttccaaaaaaacagacgtcattgttgtatatctccatcttctactaaaaatga 45044273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 322 - 365
Target Start/End: Complemental strand, 15577920 - 15577877
Alignment:
Q  322 atttagagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  15577920 atttagagcaatgctatatatcaagaaagattttatcaagaaaa 15577877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 365
Target Start/End: Complemental strand, 48881007 - 48880954
Alignment:
Q  312 acacgatataatttagagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||| |||| |||| |||||||| ||||||||||||||||||||||||||||||    
T  48881007 acactatattattttgagcaatgctatatatcaagaaagattttatcaagaaaa 48880954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 15329272 - 15329311
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  15329272 agagcaatgctatatatcaagaaagattttatcaagaaaa 15329311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 45637711 - 45637750
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  45637711 agagcaatgctatatatcaagaaagattttatcaagaaaa 45637750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 3961979 - 3962017
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  3961979 gagcaatgctatatatcaagaaagattttatcaagaaaa 3962017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 4974800 - 4974762
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  4974800 gagcaatgctatatatcaagaaagattttatcaagaaaa 4974762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 24394972 - 24395010
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  24394972 gagcaatgctatatatcaagaaagattttatcaagaaaa 24395010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 42611811 - 42611849
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  42611811 gagcaatgctatatatcaagaaagattttatcaagaaaa 42611849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 18036975 - 18037016
Alignment:
Q  324 ttagagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||||| |||||||||||||||||||| |||||||||    
T  18036975 ttagagcaatgatatatatcaagaaagattttttcaagaaaa 18037016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 37477146 - 37477107
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  37477146 agagcaatgctatatatcaagaaagattttctcaagaaaa 37477107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 357
Target Start/End: Original strand, 42696082 - 42696113
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttat 357  Q
    ||||||||||||||||||||||||||||||||    
T  42696082 agagcaatgttatatatcaagaaagattttat 42696113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 20010162 - 20010124
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  20010162 gagcaatgctatatatcaagaaagattttatcaaaaaaa 20010124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 34482835 - 34482873
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  34482835 gagcaatgctatatatcaagaaagattttattaagaaaa 34482873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 365
Target Start/End: Original strand, 35444556 - 35444596
Alignment:
Q  325 tagagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||||| ||||||| |||||||||||| |||||||||    
T  35444556 tagagcaatgctatatattaagaaagattttttcaagaaaa 35444596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 14138667 - 14138706
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14138667 agagcaatgttatatatcaagaaagattttatcaagaaaa 14138706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 325 - 365
Target Start/End: Original strand, 3362776 - 3362816
Alignment:
Q  325 tagagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  3362776 tagagcaatgctatatatcaagaaagattttatcaagaaaa 3362816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 324 - 364
Target Start/End: Original strand, 13664639 - 13664679
Alignment:
Q  324 ttagagcaatgttatatatcaagaaagattttatcaagaaa 364  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  13664639 ttagagcaatgttatatattaagaaagattttatcaagaaa 13664679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 325 - 365
Target Start/End: Complemental strand, 38899793 - 38899753
Alignment:
Q  325 tagagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  38899793 tagagcaatgctatatatcaagaaagattttatcaagaaaa 38899753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 2477635 - 2477674
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  2477635 agagcaatgctatatatcaagaaagattttatcaagaaaa 2477674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 6043577 - 6043538
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  6043577 agagcaatgctatatatcaagaaagattttatcaagaaaa 6043538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 8145374 - 8145413
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  8145374 agaggaatgttatatatcaagaaagattttatcaagaaaa 8145413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 3522071 - 3522033
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  3522071 gagcaatgttatatatcaagaaagattttttcaagaaaa 3522033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 11361196 - 11361158
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  11361196 gagcaatgctatatatcaagaaagattttatcaagaaaa 11361158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 12850801 - 12850839
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  12850801 gagcaatgctatatatcaagaaagattttatcaagaaaa 12850839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 4892201 - 4892240
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  4892201 agagcaatgctatatatcaagaaagattttttcaagaaaa 4892240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 22913119 - 22913081
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  22913119 gagcaatgctatatatcaagaaagattttttcaagaaaa 22913081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 25398238 - 25398276
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  25398238 gagcaatgctatatatcaagaaagattttttcaagaaaa 25398276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 33584394 - 33584356
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  33584394 gagcaatgctatatatcaagaaagattttttcaagaaaa 33584356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 364
Target Start/End: Complemental strand, 12614798 - 12614761
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaa 364  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  12614798 gagcaatgctatatatcaagaaatattttatcaagaaa 12614761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 13354845 - 13354884
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13354845 agagcaatgttatatatcaagaaagattttatcaagaaaa 13354884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 325 - 365
Target Start/End: Original strand, 35160755 - 35160795
Alignment:
Q  325 tagagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  35160755 tagagcaatgctatatatcaagaaagattttatcaagaaaa 35160795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 322 - 365
Target Start/End: Complemental strand, 7475578 - 7475535
Alignment:
Q  322 atttagagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||||||| |||||||||||||||||||| |||||||||    
T  7475578 atttagagcaatgctatatatcaagaaagattttttcaagaaaa 7475535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 364
Target Start/End: Complemental strand, 9293642 - 9293604
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaa 364  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  9293642 agagcaatgctatatatcaagaaagattttatcaagaaa 9293604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 21936081 - 21936119
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  21936081 gagcaatgctatatatcaagaaagattttatcaagaaaa 21936119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 330 - 364
Target Start/End: Complemental strand, 40262748 - 40262714
Alignment:
Q  330 caatgttatatatcaagaaagattttatcaagaaa 364  Q
    |||||||||||||||||||||||||||||||||||    
T  40262748 caatgttatatatcaagaaagattttatcaagaaa 40262714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 328 - 365
Target Start/End: Original strand, 10661888 - 10661925
Alignment:
Q  328 agcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  10661888 agcaatgctatatatcaagaaagattttatcaagaaaa 10661925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 364
Target Start/End: Complemental strand, 14941433 - 14941394
Alignment:
Q  325 tagagcaatgttatatatcaagaaagattttatcaagaaa 364  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  14941433 tagagcaatgctatatatcaagaaagattttattaagaaa 14941394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 23268128 - 23268089
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  23268128 agagcaatgctatatatcaagaaagattttttcaagaaaa 23268089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 330 - 365
Target Start/End: Complemental strand, 31174896 - 31174861
Alignment:
Q  330 caatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||||||||||||||||||||||| |||||||    
T  31174896 caatgttatatatcaagaaagattttattaagaaaa 31174861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 33380207 - 33380245
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  33380207 gagcaatgctatatatcaagaaagattttttcaagaaaa 33380245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 325 - 363
Target Start/End: Complemental strand, 41819845 - 41819807
Alignment:
Q  325 tagagcaatgttatatatcaagaaagattttatcaagaa 363  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41819845 tagagcaatgttatatatcaagaaagattttatcaagaa 41819807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 1646031 - 1645992
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  1646031 agagcaatgctatatatcaagaaagattttatcaagaaaa 1645992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 15187559 - 15187598
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  15187559 agagcaatgctatatatcaagaaagattttatcaagaaaa 15187598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 32064744 - 32064783
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  32064744 agagcaatgctatatatcaagaaagattttatcaagaaaa 32064783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 42755108 - 42755069
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  42755108 agagcaatgatatatatcaagaaagattttatcaagaaaa 42755069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 24211618 - 24211580
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  24211618 gagcaatgctatatatcaagaaagattttatcaagaaaa 24211580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 32393858 - 32393896
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  32393858 gagcaatgctatatatcaagaaagattttatcaagaaaa 32393896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 34665382 - 34665420
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  34665382 gagcaatgctatatatcaagaaagattttatcaagaaaa 34665420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 6108299 - 6108260
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||||||||||||||||||||||||| | |||||||    
T  6108299 agagcaatgttatatatcaagaaagatttttttaagaaaa 6108260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 17841916 - 17841877
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  17841916 agagcaatgctatatatcaagaaagattttttcaagaaaa 17841877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 26042182 - 26042143
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  26042182 agagcaatgctatatattaagaaagattttatcaagaaaa 26042143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 30835111 - 30835080
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  30835111 gagcaatgttatatatcaagaaagattttatc 30835080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 39772867 - 39772828
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  39772867 agagcaatgttatatatcaagaaatattttatcaaaaaaa 39772828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 40780195 - 40780156
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  40780195 agagcaatgctatatatcaagaaagattttttcaagaaaa 40780156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 20091866 - 20091828
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  20091866 gagcaatgctatatatcaagaaatattttatcaagaaaa 20091828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 35353041 - 35353079
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  35353041 gagcaatgctatatatcaagaaagattttttcaagaaaa 35353079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 365
Target Start/End: Original strand, 14128865 - 14128902
Alignment:
Q  328 agcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  14128865 agcaatgctatatatcaagaaagattttatcaataaaa 14128902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 365
Target Start/End: Original strand, 38016980 - 38017009
Alignment:
Q  336 tatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||||||||||||||||||||||||    
T  38016980 tatatatcaagaaagattttatcaagaaaa 38017009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 364
Target Start/End: Complemental strand, 27782181 - 27782145
Alignment:
Q  328 agcaatgttatatatcaagaaagattttatcaagaaa 364  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  27782181 agcaatgctatatatcaagaaatattttatcaagaaa 27782145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 8320649 - 8320611
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8320649 gagcaatgttatatatcaagaaagattttatcaagaaaa 8320611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 323 - 365
Target Start/End: Complemental strand, 22426413 - 22426371
Alignment:
Q  323 tttagagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  22426413 tttagagcaatgttatatattaagaaagattttatcaagaaaa 22426371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 325 - 365
Target Start/End: Original strand, 42297351 - 42297391
Alignment:
Q  325 tagagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  42297351 tagagcaatgctatatatcaagaaagattttatcaagaaaa 42297391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 2754716 - 2754755
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  2754716 agagcaatgctatatatcaagaaagattttatcaagaaaa 2754755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 3574593 - 3574554
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  3574593 agagcaatgctatatatcaagaaagattttatcaagaaaa 3574554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 11347267 - 11347306
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  11347267 agagcaatgctatatatcaagaaagattttatcaagaaaa 11347306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 3456064 - 3456102
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  3456064 gagcaatgctatatatcaagaaagattttatcaagaaaa 3456102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 6041884 - 6041922
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  6041884 gagcaatgctatatatcaagaaagattttatcaagaaaa 6041922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 19650965 - 19650927
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  19650965 gagcaatgttatatattaagaaagattttatcaagaaaa 19650927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 37217118 - 37217080
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  37217118 gagcaatgctatatatcaagaaagattttatcaagaaaa 37217080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 48160905 - 48160943
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  48160905 gagcaatgctatatatcaagaaagattttatcaagaaaa 48160943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 328 - 365
Target Start/End: Complemental strand, 9797093 - 9797056
Alignment:
Q  328 agcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||||||||||||||||||||||| |||||||||    
T  9797093 agcaatgttatatatcaagaaagattttctcaagaaaa 9797056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 3137480 - 3137441
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  3137480 agagcaatgctatatatcaagaaagattttttcaagaaaa 3137441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 24343546 - 24343585
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  24343546 agagcaatgctatatattaagaaagattttatcaagaaaa 24343585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 33113792 - 33113831
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| |||||||||||||||||||||| |||||||    
T  33113792 agagcaatgctatatatcaagaaagattttattaagaaaa 33113831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 33839530 - 33839569
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  33839530 agagcaatgttatatattaagaaagattttatcaaaaaaa 33839569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 34482976 - 34482937
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  34482976 agagcaatgctatatatcaagaaagattttttcaagaaaa 34482937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 30385011 - 30385049
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  30385011 gagcaatgctatttatcaagaaagattttatcaagaaaa 30385049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 330 - 364
Target Start/End: Original strand, 40327878 - 40327912
Alignment:
Q  330 caatgttatatatcaagaaagattttatcaagaaa 364  Q
    ||||| |||||||||||||||||||||||||||||    
T  40327878 caatgctatatatcaagaaagattttatcaagaaa 40327912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 358
Target Start/End: Complemental strand, 47402662 - 47402630
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatc 358  Q
    ||||||||| |||||||||||||||||||||||    
T  47402662 agagcaatgctatatatcaagaaagattttatc 47402630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 31078887 - 31078846
Alignment:
Q  324 ttagagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  31078887 ttagagcaatgctatatatcaagaaagattttatcaagaaaa 31078846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 325 - 365
Target Start/End: Complemental strand, 33530755 - 33530715
Alignment:
Q  325 tagagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  33530755 tagagcaatgctatatatcaagaaagattttatcaagaaaa 33530715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 4751445 - 4751484
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  4751445 agagcaatgctatatatcaagaaagattttatcaagaaaa 4751484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 10442855 - 10442816
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  10442855 agagcaatgctatatatcaagaaagattttatcaagaaaa 10442816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 23964531 - 23964492
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  23964531 agagcaatgttatatatcaagaaagattttatcaaaaaaa 23964492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 2624837 - 2624875
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  2624837 gagcaatgctatatatcaagaaagattttatcaagaaaa 2624875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 22199261 - 22199299
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  22199261 gagcaatgctatatatcaagaaagattttatcaagaaaa 22199299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 36072947 - 36072985
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  36072947 gagcaatgctatatatcaagaaagattttatcaagaaaa 36072985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 49387953 - 49387915
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  49387953 gagcaatgctatatatcaagaaagattttatcaagaaaa 49387915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 328 - 365
Target Start/End: Complemental strand, 7745176 - 7745139
Alignment:
Q  328 agcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  7745176 agcaatgctatatatcaagaaagattttatcaagaaaa 7745139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 21802388 - 21802349
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  21802388 agagcaatgctatatatcaagaaatattttatcaagaaaa 21802349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 24128238 - 24128277
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  24128238 agagcaatgctatatatcaagaaagattttttcaagaaaa 24128277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 24392666 - 24392705
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  24392666 agagcaatgctatatatcaagaaagattttctcaagaaaa 24392705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 47290065 - 47290104
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  47290065 agagcaatgctatatatcaagaaagattttttcaagaaaa 47290104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 6127274 - 6127313
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  6127274 agagcaatgctatatatcaagaaagattttatcaagaaaa 6127313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 23291150 - 23291111
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  23291150 agagcaatgctatatatcaagaaagattttatcaagaaaa 23291111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 28675147 - 28675186
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  28675147 agagcaatgctatatatcaagaaagattttatcaagaaaa 28675186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 33695393 - 33695354
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  33695393 agagcaatgctatatatcaagaaagattttatcaagaaaa 33695354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 33696695 - 33696734
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  33696695 agagcaatgctatatatcaagaaagattttatcaagaaaa 33696734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 2309489 - 2309455
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaa 360  Q
    |||||||||||||||||||||||||||||||||||    
T  2309489 agagcaatgttatatatcaagaaagattttatcaa 2309455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 17705530 - 17705492
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  17705530 gagcaatgctatatatcaagaaagattttatcaagaaaa 17705492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 18365639 - 18365600
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  18365639 agagcaatgctatatatcaagaaagattttatcaaaaaaa 18365600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 18370903 - 18370864
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  18370903 agagcaatgctatatatcaagaaagattttatcaaaaaaa 18370864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 17176086 - 17176048
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  17176086 gagcaatgctatatatcaagaaagattttatcaataaaa 17176048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 25986930 - 25986968
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  25986930 gagcaatgctatatatcaagaaagattttattaagaaaa 25986968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 8515787 - 8515755
Alignment:
Q  330 caatgttatatatcaagaaagattttatcaaga 362  Q
    ||||| |||||||||||||||||||||||||||    
T  8515787 caatgctatatatcaagaaagattttatcaaga 8515755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 18404441 - 18404480
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  18404441 agagcaatgctatatatcaagaaagattttatcaagaaaa 18404480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 25973413 - 25973452
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  25973413 agagcaatgttatatatcaagaaagattttatcatgaaaa 25973452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 40214988 - 40215026
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  40214988 gagcaatgctatatatcaagaaagattttatcaagaaaa 40215026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 327 - 364
Target Start/End: Original strand, 52329319 - 52329356
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaa 364  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  52329319 gagcaatgttatatatcaagaaagaatttatcaagaaa 52329356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 16045864 - 16045825
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  16045864 agagtaatgctatatatcaagaaagattttatcaagaaaa 16045825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 19015403 - 19015442
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  19015403 agagcaatgctatatatcaagaaagattttttcaagaaaa 19015442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 25463675 - 25463714
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| |||||||||||||||||||||| |||||||    
T  25463675 agagcaatgctatatatcaagaaagattttatgaagaaaa 25463714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 364
Target Start/End: Original strand, 34519756 - 34519795
Alignment:
Q  325 tagagcaatgttatatatcaagaaagattttatcaagaaa 364  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  34519756 tagagcaatgctatatatcaagaaagattttattaagaaa 34519795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 364
Target Start/End: Original strand, 51620978 - 51621017
Alignment:
Q  325 tagagcaatgttatatatcaagaaagattttatcaagaaa 364  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  51620978 tagagcaatgctatatatcaagaaagattttattaagaaa 51621017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 9910358 - 9910320
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  9910358 gagcaatgctatatatcaagaaagattttttcaagaaaa 9910320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 354
Target Start/End: Original strand, 10167412 - 10167442
Alignment:
Q  324 ttagagcaatgttatatatcaagaaagattt 354  Q
    |||||||||||||||||||||||||||||||    
T  10167412 ttagagcaatgttatatatcaagaaagattt 10167442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 32000332 - 32000294
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  32000332 gagcaatgctatatatcaagaaagattttctcaagaaaa 32000294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 36966773 - 36966735
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  36966773 gagcaatgctatatatcaagaaagattttttcaagaaaa 36966735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 37821899 - 37821861
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  37821899 gagcaatgctatatatcaagaaagattttttcaagaaaa 37821861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 44094698 - 44094736
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  44094698 gagcaatgctatatatcaagaaatattttatcaagaaaa 44094736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 27523054 - 27523087
Alignment:
Q  331 aatgttatatatcaagaaagattttatcaagaaa 364  Q
    |||||||||||||||||| |||||||||||||||    
T  27523054 aatgttatatatcaagaatgattttatcaagaaa 27523087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 41876510 - 41876469
Alignment:
Q  324 ttagagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||||| |||||||||||||||||||| |||| ||||    
T  41876510 ttagagcaatgctatatatcaagaaagattttttcaaaaaaa 41876469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 11621 - 11659
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  11621 gagcaatgctatatatcaagaaagattttatcaagaaaa 11659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 12841 - 12880
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  12841 agagcaatgctatatatcaagaaagattttttcaagaaaa 12880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 4395 - 4434
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  4395 agagcaatgctatatatcaagaaagattttttcaagaaaa 4434  T

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Target: scaffold0096 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 41010 - 41049
Alignment:
Q  326 agagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  41010 agagcaatgctatatatcaagaaagattttatcaaaaaaa 41049  T

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Target: scaffold0085 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 47850 - 47888
Alignment:
Q  327 gagcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  47850 gagcaatgctatttatcaagaaagattttatcaagaaaa 47888  T

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Target: scaffold0665 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 365
Target Start/End: Original strand, 3069 - 3106
Alignment:
Q  328 agcaatgttatatatcaagaaagattttatcaagaaaa 365  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  3069 agcaatgctatatatcaagaaagattttatcaataaaa 3106  T

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