View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11380_high_12 (Length: 213)

Name: NF11380_high_12
Description: NF11380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11380_high_12
NF11380_high_12
[»] chr2 (49 HSPs)
chr2 (65-199)||(33625226-33625360)
chr2 (86-200)||(38435075-38435185)
chr2 (95-194)||(33287550-33287645)
chr2 (86-164)||(19336942-19337020)
chr2 (86-164)||(42149709-42149787)
chr2 (98-200)||(9556430-9556528)
chr2 (96-194)||(37470192-37470286)
chr2 (86-164)||(9496021-9496099)
chr2 (86-164)||(23915742-23915820)
chr2 (86-200)||(33504346-33504457)
chr2 (86-200)||(26670891-26671001)
chr2 (99-200)||(26784402-26784499)
chr2 (95-159)||(37452284-37452348)
chr2 (86-157)||(6219127-6219198)
chr2 (99-194)||(19235046-19235137)
chr2 (96-162)||(31254445-31254511)
chr2 (96-164)||(8197600-8197668)
chr2 (96-164)||(8202360-8202428)
chr2 (96-200)||(18959034-18959134)
chr2 (96-200)||(19855585-19855685)
chr2 (95-162)||(21834711-21834778)
chr2 (83-158)||(26850396-26850470)
chr2 (109-164)||(38860333-38860388)
chr2 (96-200)||(45543132-45543231)
chr2 (86-164)||(12882094-12882172)
chr2 (96-162)||(13240822-13240888)
chr2 (115-164)||(12443139-12443188)
chr2 (86-139)||(36366816-36366869)
chr2 (100-162)||(45077884-45077948)
chr2 (128-164)||(1626350-1626386)
chr2 (96-164)||(12141699-12141767)
chr2 (96-144)||(13474273-13474321)
chr2 (86-199)||(43751996-43752105)
chr2 (129-164)||(12026097-12026132)
chr2 (96-147)||(32402672-32402723)
chr2 (96-200)||(44437780-44437880)
chr2 (126-164)||(3305898-3305936)
chr2 (126-164)||(19024333-19024371)
chr2 (126-164)||(43832253-43832291)
chr2 (97-162)||(2377210-2377275)
chr2 (105-162)||(11412865-11412921)
chr2 (86-147)||(36616860-36616921)
chr2 (86-147)||(36650614-36650675)
chr2 (126-200)||(42543358-42543428)
chr2 (127-164)||(45640615-45640652)
chr2 (126-166)||(2906082-2906122)
chr2 (128-164)||(7431980-7432016)
chr2 (96-164)||(9578773-9578840)
chr2 (96-164)||(37481676-37481744)
[»] chr8 (49 HSPs)
chr8 (101-200)||(35643670-35643765)
chr8 (96-200)||(30198325-30198425)
chr8 (86-164)||(16035776-16035854)
chr8 (83-164)||(24399835-24399916)
chr8 (96-201)||(17491713-17491814)
chr8 (86-164)||(30559848-30559926)
chr8 (86-164)||(30783091-30783169)
chr8 (98-163)||(36069758-36069823)
chr8 (87-195)||(38391943-38392047)
chr8 (95-162)||(41971848-41971915)
chr8 (86-144)||(29520824-29520882)
chr8 (86-144)||(43904714-43904772)
chr8 (86-163)||(490491-490568)
chr8 (126-200)||(4011206-4011276)
chr8 (96-164)||(16705902-16705971)
chr8 (95-164)||(33827815-33827884)
chr8 (86-200)||(35914650-35914760)
chr8 (96-190)||(39967558-39967648)
chr8 (86-162)||(42584516-42584592)
chr8 (96-200)||(32931084-32931183)
chr8 (86-198)||(35362699-35362807)
chr8 (86-164)||(7615640-7615718)
chr8 (86-164)||(14459050-14459128)
chr8 (95-194)||(23023354-23023449)
chr8 (98-200)||(18737199-18737296)
chr8 (98-200)||(18742084-18742181)
chr8 (98-200)||(18747048-18747145)
chr8 (100-164)||(79182-79246)
chr8 (96-148)||(3638392-3638444)
chr8 (90-142)||(10824242-10824294)
chr8 (96-164)||(11733902-11733970)
chr8 (99-163)||(16917339-16917403)
chr8 (96-144)||(21425221-21425269)
chr8 (87-200)||(28169515-28169624)
chr8 (86-162)||(33076282-33076357)
chr8 (97-164)||(2216443-2216508)
chr8 (100-200)||(10079970-10080066)
chr8 (136-199)||(12692339-12692402)
chr8 (81-136)||(21121329-21121384)
chr8 (126-187)||(39388918-39388976)
chr8 (101-200)||(45512558-45512654)
chr8 (97-188)||(5908781-5908868)
chr8 (86-144)||(31715995-31716053)
chr8 (86-164)||(45041365-45041442)
chr8 (126-200)||(38178349-38178419)
chr8 (164-200)||(5127393-5127429)
chr8 (96-164)||(9904941-9905009)
chr8 (96-164)||(10108968-10109036)
chr8 (128-164)||(16351533-16351569)
[»] chr7 (44 HSPs)
chr7 (98-200)||(1569139-1569237)
chr7 (86-200)||(45601599-45601709)
chr7 (86-188)||(21517429-21517527)
chr7 (86-200)||(28627982-28628092)
chr7 (86-200)||(38135262-38135372)
chr7 (106-166)||(30664721-30664781)
chr7 (86-200)||(26741943-26742055)
chr7 (96-162)||(27893622-27893688)
chr7 (96-194)||(12966145-12966239)
chr7 (86-158)||(36101826-36101898)
chr7 (96-163)||(37976391-37976458)
chr7 (96-162)||(5418224-5418289)
chr7 (100-162)||(28542007-28542069)
chr7 (86-164)||(35922408-35922486)
chr7 (86-181)||(36239845-36239936)
chr7 (103-164)||(24549754-24549815)
chr7 (96-156)||(33731997-33732057)
chr7 (86-146)||(34341444-34341504)
chr7 (86-193)||(9210753-9210856)
chr7 (126-164)||(30144930-30144968)
chr7 (86-139)||(2882785-2882838)
chr7 (86-200)||(40979977-40980087)
chr7 (99-164)||(42187596-42187660)
chr7 (96-164)||(19262517-19262585)
chr7 (97-164)||(28562425-28562493)
chr7 (97-194)||(36136893-36136986)
chr7 (108-164)||(43281986-43282042)
chr7 (96-200)||(22174123-22174223)
chr7 (95-162)||(28858202-28858269)
chr7 (129-164)||(29653638-29653673)
chr7 (86-141)||(30814174-30814229)
chr7 (101-144)||(33103101-33103144)
chr7 (102-163)||(34926587-34926645)
chr7 (96-200)||(47848797-47848896)
chr7 (86-164)||(14057633-14057711)
chr7 (86-164)||(14367661-14367739)
chr7 (137-200)||(30814771-30814830)
chr7 (86-164)||(40138997-40139075)
chr7 (86-144)||(40391872-40391930)
chr7 (86-164)||(47796201-47796279)
chr7 (96-144)||(5577546-5577594)
chr7 (96-156)||(30200023-30200083)
chr7 (102-187)||(43282545-43282626)
chr7 (130-195)||(46973720-46973781)
[»] chr6 (19 HSPs)
chr6 (86-200)||(34554-34664)
chr6 (86-164)||(24665966-24666044)
chr6 (96-200)||(9593767-9593867)
chr6 (96-200)||(33997603-33997703)
chr6 (86-164)||(8364711-8364789)
chr6 (86-200)||(5095957-5096067)
chr6 (86-188)||(31818666-31818764)
chr6 (96-164)||(6293451-6293519)
chr6 (98-164)||(1748006-1748072)
chr6 (99-164)||(31831920-31831986)
chr6 (96-166)||(35199682-35199751)
chr6 (87-164)||(43102-43179)
chr6 (97-146)||(33080319-33080368)
chr6 (86-145)||(3210557-3210616)
chr6 (86-121)||(7513039-7513074)
chr6 (98-164)||(14389222-14389288)
chr6 (99-164)||(655456-655521)
chr6 (127-164)||(1681611-1681648)
chr6 (126-200)||(1747730-1747800)
[»] chr4 (61 HSPs)
chr4 (86-161)||(25574982-25575057)
chr4 (86-161)||(44384988-44385063)
chr4 (106-198)||(50680865-50680953)
chr4 (87-164)||(26024900-26024977)
chr4 (96-164)||(30621260-30621328)
chr4 (86-158)||(55007907-55007979)
chr4 (86-198)||(37488216-37488324)
chr4 (97-200)||(7681970-7682069)
chr4 (96-200)||(47147496-47147594)
chr4 (96-164)||(42639079-42639147)
chr4 (97-164)||(2557732-2557799)
chr4 (96-200)||(13805324-13805424)
chr4 (86-164)||(40420263-40420339)
chr4 (96-200)||(47372774-47372874)
chr4 (96-200)||(53540413-53540513)
chr4 (106-164)||(26024988-26025046)
chr4 (95-153)||(31339690-31339748)
chr4 (98-193)||(45204900-45204991)
chr4 (86-164)||(51421885-51421963)
chr4 (81-161)||(27049221-27049301)
chr4 (96-144)||(34208328-34208376)
chr4 (96-164)||(37042723-37042791)
chr4 (96-200)||(20105577-20105677)
chr4 (101-164)||(31043227-31043290)
chr4 (96-143)||(34379579-34379626)
chr4 (96-159)||(41192221-41192284)
chr4 (96-196)||(50662515-50662611)
chr4 (97-164)||(56439631-56439698)
chr4 (126-164)||(29182607-29182645)
chr4 (86-147)||(5306468-5306529)
chr4 (126-188)||(10209171-10209229)
chr4 (86-139)||(29398984-29399037)
chr4 (126-200)||(31961355-31961425)
chr4 (126-200)||(45569098-45569168)
chr4 (86-159)||(55388260-55388333)
chr4 (96-164)||(934490-934558)
chr4 (96-160)||(6843774-6843838)
chr4 (116-164)||(7544602-7544650)
chr4 (100-164)||(21945701-21945765)
chr4 (96-164)||(26037564-26037632)
chr4 (99-200)||(34233086-34233183)
chr4 (87-200)||(49987531-49987640)
chr4 (86-162)||(53518372-53518448)
chr4 (86-142)||(55300582-55300638)
chr4 (96-188)||(8599000-8599088)
chr4 (96-188)||(21107127-21107215)
chr4 (106-157)||(44047440-44047491)
chr4 (86-141)||(51438623-51438678)
chr4 (96-162)||(31403093-31403159)
chr4 (96-162)||(31459151-31459217)
chr4 (96-162)||(32339716-32339782)
chr4 (98-164)||(42293326-42293392)
chr4 (86-164)||(50967077-50967154)
chr4 (95-181)||(21214644-21214726)
chr4 (96-165)||(22420776-22420844)
chr4 (126-200)||(31897517-31897587)
chr4 (96-164)||(33710079-33710150)
chr4 (126-200)||(46372147-46372217)
chr4 (96-164)||(2589227-2589295)
chr4 (96-144)||(26510563-26510611)
chr4 (98-162)||(40018250-40018314)
[»] chr1 (48 HSPs)
chr1 (96-188)||(40416506-40416594)
chr1 (86-161)||(43375647-43375722)
chr1 (86-164)||(52532665-52532743)
chr1 (96-194)||(3818915-3819009)
chr1 (87-164)||(8796364-8796441)
chr1 (97-164)||(990518-990585)
chr1 (100-200)||(6025728-6025824)
chr1 (96-200)||(38869005-38869105)
chr1 (95-162)||(13827638-13827707)
chr1 (86-164)||(27520256-27520334)
chr1 (96-162)||(29577202-29577267)
chr1 (86-164)||(41560384-41560462)
chr1 (86-200)||(9599443-9599553)
chr1 (97-166)||(10569131-10569200)
chr1 (98-200)||(42501231-42501329)
chr1 (87-164)||(51812664-51812741)
chr1 (96-164)||(39515927-39515995)
chr1 (86-153)||(5338879-5338946)
chr1 (86-144)||(6084150-6084208)
chr1 (95-194)||(8342939-8343034)
chr1 (126-164)||(12135862-12135900)
chr1 (96-187)||(29128919-29129006)
chr1 (126-188)||(8203223-8203281)
chr1 (126-188)||(19969301-19969359)
chr1 (86-143)||(25715375-25715432)
chr1 (126-200)||(30834066-30834136)
chr1 (86-200)||(36339853-36339962)
chr1 (101-142)||(39776959-39777000)
chr1 (86-187)||(7762486-7762583)
chr1 (86-142)||(28511850-28511906)
chr1 (96-144)||(52900701-52900749)
chr1 (86-157)||(27072536-27072607)
chr1 (96-147)||(40920588-40920639)
chr1 (95-162)||(50636238-50636305)
chr1 (162-200)||(5338847-5338885)
chr1 (114-164)||(8676942-8676992)
chr1 (86-164)||(12930360-12930438)
chr1 (96-162)||(17233830-17233896)
chr1 (126-164)||(28528510-28528548)
chr1 (86-144)||(34444531-34444589)
chr1 (86-164)||(39140670-39140748)
chr1 (99-164)||(1661574-1661639)
chr1 (86-155)||(31274450-31274519)
chr1 (86-200)||(32404575-32404685)
chr1 (96-136)||(2544776-2544816)
chr1 (126-162)||(10584986-10585022)
chr1 (96-144)||(11941639-11941687)
chr1 (96-144)||(14557743-14557791)
[»] chr5 (33 HSPs)
chr5 (96-200)||(9235172-9235270)
chr5 (95-201)||(30588569-30588671)
chr5 (96-200)||(12576919-12577019)
chr5 (86-164)||(7359310-7359387)
chr5 (86-164)||(14667926-14668004)
chr5 (86-164)||(43475394-43475472)
chr5 (96-198)||(14749432-14749530)
chr5 (96-196)||(11675656-11675753)
chr5 (87-199)||(6889117-6889225)
chr5 (86-164)||(7678633-7678710)
chr5 (86-147)||(20367065-20367126)
chr5 (86-161)||(418083-418158)
chr5 (95-142)||(43557891-43557938)
chr5 (95-164)||(23980099-23980168)
chr5 (95-164)||(35615438-35615507)
chr5 (97-161)||(17340496-17340560)
chr5 (96-164)||(38684635-38684703)
chr5 (96-164)||(43035136-43035204)
chr5 (96-200)||(6859504-6859604)
chr5 (86-194)||(29922413-29922517)
chr5 (87-164)||(38341479-38341552)
chr5 (86-121)||(42504296-42504331)
chr5 (95-141)||(15252802-15252848)
chr5 (95-194)||(27998570-27998665)
chr5 (126-164)||(28186864-28186902)
chr5 (126-188)||(2713079-2713137)
chr5 (126-200)||(18698917-18698987)
chr5 (129-162)||(28005692-28005725)
chr5 (109-162)||(39322138-39322191)
chr5 (96-193)||(28012-28105)
chr5 (126-166)||(2066150-2066190)
chr5 (126-166)||(4460360-4460400)
chr5 (126-191)||(15369886-15369947)
[»] chr3 (45 HSPs)
chr3 (86-162)||(36304123-36304199)
chr3 (96-162)||(19758044-19758110)
chr3 (86-200)||(39600730-39600840)
chr3 (99-188)||(40116530-40116615)
chr3 (96-164)||(49841771-49841839)
chr3 (86-165)||(29475840-29475919)
chr3 (97-164)||(45289151-45289218)
chr3 (96-162)||(19737141-19737207)
chr3 (86-164)||(23534619-23534697)
chr3 (86-144)||(40116387-40116445)
chr3 (86-201)||(54365024-54365135)
chr3 (86-159)||(29601052-29601125)
chr3 (96-156)||(55244441-55244501)
chr3 (96-164)||(37598229-37598297)
chr3 (86-141)||(40991609-40991664)
chr3 (103-162)||(44571584-44571643)
chr3 (127-186)||(36820067-36820122)
chr3 (96-200)||(54128501-54128602)
chr3 (86-138)||(40106669-40106721)
chr3 (126-162)||(41452829-41452865)
chr3 (86-162)||(41842572-41842648)
chr3 (100-164)||(43308717-43308781)
chr3 (96-188)||(45486908-45486999)
chr3 (129-164)||(33700338-33700373)
chr3 (86-121)||(39208806-39208841)
chr3 (96-200)||(45493751-45493851)
chr3 (107-162)||(48657398-48657453)
chr3 (86-164)||(49042091-49042170)
chr3 (86-121)||(51027756-51027791)
chr3 (130-164)||(2340810-2340844)
chr3 (86-200)||(33755393-33755501)
chr3 (98-144)||(38431023-38431069)
chr3 (96-162)||(39235295-39235361)
chr3 (126-181)||(46431768-46431819)
chr3 (86-164)||(50960686-50960764)
chr3 (86-119)||(2195273-2195306)
chr3 (99-164)||(37534264-37534329)
chr3 (95-144)||(37779052-37779101)
chr3 (86-200)||(41482186-41482298)
chr3 (86-200)||(42510065-42510175)
chr3 (96-164)||(19676140-19676208)
chr3 (164-200)||(31261065-31261101)
chr3 (86-146)||(32170578-32170638)
chr3 (96-164)||(42026595-42026663)
chr3 (98-162)||(50237695-50237759)
[»] scaffold0015 (1 HSPs)
scaffold0015 (86-200)||(66660-66771)
[»] scaffold0010 (1 HSPs)
scaffold0010 (86-164)||(160373-160451)
[»] scaffold0491 (1 HSPs)
scaffold0491 (98-200)||(3889-3986)
[»] scaffold0050 (1 HSPs)
scaffold0050 (86-200)||(58275-58385)
[»] scaffold0018 (1 HSPs)
scaffold0018 (126-188)||(178509-178567)
[»] scaffold0373 (1 HSPs)
scaffold0373 (96-160)||(2360-2424)
[»] scaffold1858 (1 HSPs)
scaffold1858 (82-138)||(920-976)


Alignment Details
Target: chr2 (Bit Score: 123; Significance: 2e-63; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 65 - 199
Target Start/End: Original strand, 33625226 - 33625360
Alignment:
Q  65 agtcttatcccactaaatgaacaaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33625226 agtcttatcccactaaatgaacaaattacttcataatgttctatcataaaccatattactttccaactcattaatctctagatatttcttaatagtttct 33625325  T
Q  165 ttctcttatagtttttccaggtctacctctgcctc 199  Q
    |||||||| |||||||| |||||||||||||||||    
T  33625326 ttctcttacagtttttctaggtctacctctgcctc 33625360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 38435185 - 38435075
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  |||||||||| ||||||||||| ||| || |||||| ||||||||||||||| ||||||||||||    ||||||| ||||||||| |||    
T  38435185 caaattacgccataatgttcaatcataaaccaaatttcgatccaacacattaatctctagatctttcttaatagt----ttctcttgtagtttttctagg 38435090  T
Q  186 tctacctctgcctct 200  Q
    |||||||||||||||    
T  38435089 tctacctctgcctct 38435075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 33287645 - 33287550
Alignment:
Q  95 tcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctct 194  Q
    ||||||||||||||||||||||||||| || || ||||||||||| ||||||| ||||||||||||    ||||||||||||||||| |||||| |||||    
T  33287645 tcataatgttctatcataaaccatatttcgatctaactcattaatttctagatctttcttaatagt----ttctcttatagtttttctaggtcttcctct 33287550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 19336942 - 19337020
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  |||||||||||||||||||||||||| || ||||||||||||||||||| || |||||| |||||||||    
T  19336942 caaattacgccataatgttctatcataaaccatatttcgatccaactcattaatctctaaatctttctttatagtttct 19337020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 42149709 - 42149787
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  |||||||||||||||||||||||||| |  |||| |||| |||||||||||| ||||||||||||||||    
T  42149709 caaattacgccataatgttctatcataaaccatatttctatccagctcaataatctctagatctttcttaatagtttct 42149787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 9556430 - 9556528
Alignment:
Q  98 taatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcc 197  Q
    |||||||||||||||||||||||   | ||||||||||||||| |||||| |||||||||||    ||| |||||||||||||| |||||| ||| ||||    
T  9556430 taatgttctatcataaaccatatcttgatccaactcattaatcactagatctttcttaatag----tttatcttatagtttttcaaggtcttcctttgcc 9556525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 194
Target Start/End: Original strand, 37470192 - 37470286
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctct 194  Q
    |||||||||||||||||  ||||||| || |||||||||||||||||||||| | || ||||||    ||||||||||||||||| ||||||| |||||    
T  37470192 cataatgttctatcatatgccatatttcgatccaactcattaatctctagatctgtcctaatag----tttctcttatagttttttcaggtcttcctct 37470286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 9496099 - 9496021
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  ||||||||||||||||||||||||||  | ||||||||||||| ||||| || ||||| ||||||||||    
T  9496099 caaattacgccataatgttctatcataaaccatatttggatccaactcattaacctctaaatctttctgaatagtttct 9496021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 23915742 - 23915820
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  |||| ||||||||||||||||||| | |  |||| ||||||||||||||||| ||||||||||||||||    
T  23915742 caaattacgccatagtgttctatcataaaccatagttctgtccacctcattaatctctagatttttcttaatagtttct 23915820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 33504457 - 33504346
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcatt-aatctctagatatttcttaatagtttctttctcttatagtttttccag 184  Q
    ||||||||  ||||||||||||||||| |||||||| |  ||||||| ||| ||||||||||| |||||||||||    |||||||||||||||||| ||    
T  33504457 caaattacgccataatgttctatcatataccatatttcaatccaacttattaaatctctagatctttcttaatag----tttctcttatagtttttctag 33504362  T
Q  185 gtctacctctgcctct 200  Q
    || |  ||||||||||    
T  33504361 gtttttctctgcctct 33504346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 26671001 - 26670891
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  ||| || |||||||||||| ||||||  | ||||||||||||||||||| || |||||||||||||||||    |||||||||||  |||    
T  26671001 caaattacaccattatattctatcataaatcatattttggtccaactcattaatctctaaatctttcttaatagtttctt----ttatagtttttgtagg 26670906  T
Q  186 tctacctctgcctct 200  Q
    ||| ||||| |||||    
T  26670905 tcttcctctacctct 26670891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 200
Target Start/End: Original strand, 26784402 - 26784499
Alignment:
Q  99 aatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcct 198  Q
    |||||| ||||||| |||||||| |  | ||||||||||||||||| || |||||||||||    |||||||||||||||||| ||||||  ||||||||    
T  26784402 aatgttttatcatataccatatttctattcaactcattaatctctatatctttcttaatag----tttctcttatagtttttctaggtctttctctgcct 26784497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 37452284 - 37452348
Alignment:
Q  95 tcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatag 159  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||||  | |||||||||||    
T  37452284 tcataatgttctatcataaaccatatttctgtccaactcattaatctctaattctttcttaatag 37452348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 6219198 - 6219127
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaat 157  Q
    ||||||||  |||||||||||||||||||||||||| || ||||||||| ||||||||| || |||| ||||    
T  6219198 caaattacaccataatgttctatcataaaccatatttcggtccaactcactaatctctaaatctttcctaat 6219127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 19235046 - 19235137
Alignment:
Q  99 aatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctct 194  Q
    |||||||||||| | |||||||| |  ||||| |||||||||||||||| ||||| |||||    |||||||||||||||||| |||||| |||||    
T  19235046 aatgttctatcaaataccatatttctatccaaatcattaatctctagatctttctcaatag----tttctcttatagtttttctaggtcttcctct 19235137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 31254511 - 31254445
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    ||||||||||| ||||||| |||||| |  | |||||||||||||||||||| ||||||||||||||    
T  31254511 cataatgttctgtcataaatcatatttctattcaactcattaatctctagatctttcttaatagttt 31254445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 8197600 - 8197668
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||| |||||||||| | |||||| |  |||||||||||||||| ||||| ||||||||||||||||    
T  8197600 cataatattctatcatatatcatatttctatccaactcattaatctttagatctttcttaatagtttct 8197668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 8202360 - 8202428
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||| |||||||||| | |||||| |  |||||||||||||||| ||||| ||||||||||||||||    
T  8202360 cataatattctatcatatatcatatttctatccaactcattaatctttagatctttcttaatagtttct 8202428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 18959134 - 18959034
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    ||||||||||||||||| ||||||||  | ||||||||||||||||| |  | |||| | ||||    |||||||| ||||||||| |||||| ||||||    
T  18959134 cataatgttctatcatagaccatattttgatccaactcattaatctccaagtctttccttatag----tttctcttgtagtttttctaggtcttcctctg 18959039  T
Q  196 cctct 200  Q
    |||||    
T  18959038 cctct 18959034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 19855685 - 19855585
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    ||||||| ||||||||| ||||| || |  |||| |||||||| |||| ||| |||||||||||||||||    ||||||||| || |||||| ||||||    
T  19855685 cataatgctctatcatataccatgtttctatccagctcattaacctctggatctttcttaatagtttctt----ttatagtttatctaggtcttcctctg 19855590  T
Q  196 cctct 200  Q
    |||||    
T  19855589 cctct 19855585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 162
Target Start/End: Complemental strand, 21834778 - 21834711
Alignment:
Q  95 tcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    ||||| ||||||||||||||||| |||  | |||||||||||||||| || ||||||| |||||||||    
T  21834778 tcatattgttctatcataaaccaaatttagatccaactcattaatctataaatatttcctaatagttt 21834711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 26850470 - 26850396
Alignment:
Q  83 gaacaaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaata 158  Q
    |||||||||||  ||||||||| |||||||||||||||| || |||||||||| ||| |||| |||| ||||||||    
T  26850470 gaacaaattacgccataatgttttatcataaaccatatttcg-tccaactcataaatttctaaatatatcttaata 26850396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 38860388 - 38860333
Alignment:
Q  109 cataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||| || | |||||||| ||||||||||| ||||||||||||||||    
T  38860388 cataaaccatattgcgatacaactcatgaatctctagatctttcttaatagtttct 38860333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 200
Target Start/End: Original strand, 45543132 - 45543231
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    ||||||||||||||||||||||||||  | || |||||||| | ||||| || |||  ||||||    ||||||||||||||||||||||||| |||||     
T  45543132 cataatgttctatcataaaccatatttggatcgaactcatt-acctctaaatcttttctaatag----tttctcttatagtttttccaggtcttcctcta 45543226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 12882094 - 12882172
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  || |||||||||||| ||||||||||  | ||||||||||||| ||||| ||||||| || ||||||||    
T  12882094 caaattacgccaaaatgttctatcacaaaccatatttggatccaactcattaacctctaaatatttcctagtagtttct 12882172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 13240822 - 13240888
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    ||||||| | |||||||||||| ||| || | |||||| ||||||||||||| ||||||||||||||    
T  13240822 cataatggtttatcataaaccaaatttcgattcaactcgttaatctctagatctttcttaatagttt 13240888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 12443188 - 12443139
Alignment:
Q  115 ccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||| || ||||||||||||||||||| |||| ||||||||||||||    
T  12443188 ccatatttcgatccaactcattaatctctaaatatatcttaatagtttct 12443139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 36366869 - 36366816
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaat 139  Q
    ||||||||  ||||||||||||| |||||||||||| || ||||||||||||||    
T  36366869 caaattacaccataatgttctattataaaccatatttcggtccaactcattaat 36366816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 45077948 - 45077884
Alignment:
Q  100 atgttctatcataaaccatattacgttccaactc--attaatctctagatatttcttaatagttt 162  Q
    |||||||||||||||| ||||| || ||||||||  ||||||||||| || ||||||||||||||    
T  45077948 atgttctatcataaactatatttcgatccaactctcattaatctctaaatctttcttaatagttt 45077884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 1626386 - 1626350
Alignment:
Q  128 caactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||||||||||||||| ||||||||||||||||    
T  1626386 caactcattaatctctagatctttcttaatagtttct 1626350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 12141767 - 12141699
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||| ||||||||  | ||||| |||||||||||||  | |||| |||||||||||    
T  12141767 cataatgttctatcatataccatatttggatccaagtcattaatctctaagtctttcctaatagtttct 12141699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 13474273 - 13474321
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctcta 144  Q
    ||||||||  |||||||||||||||| || |||||||||||||||||||    
T  13474273 cataatgtattatcataaaccatattccgatccaactcattaatctcta 13474321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 43751996 - 43752105
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  |||| |||||||||||| ||||| || || |||||||||||||| || | || |||| ||||||    ||||||| |||||||||| |||    
T  43751996 caaattacaacatagtgttctatcatacaccatctttcggtccaactcattaatttccaaatctttcctaatag----tttctctgatagtttttctagg 43752091  T
Q  186 tctacctctgcctc 199  Q
    ||| ||| ||||||    
T  43752092 tcttcctatgcctc 43752105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 164
Target Start/End: Original strand, 12026097 - 12026132
Alignment:
Q  129 aactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12026097 aactcattaatctctagatctttcttaatagtttct 12026132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 32402723 - 32402672
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagat 147  Q
    ||||||||||||||||| ||| |||| |  ||||||||||||||||||||||    
T  32402723 cataatgttctatcatataccttatttctatccaactcattaatctctagat 32402672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 200
Target Start/End: Original strand, 44437780 - 44437880
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    |||| |||||||||| ||||||| ||    ||||||||||| ||||||||||  ||||||||||    |||||| ||||||||||| ||||||||| ||     
T  44437780 catagtgttctatcaaaaaccatgtttttctccaactcatttatctctagatccttcttaatag----tttctcatatagtttttctaggtctaccccta 44437875  T
Q  196 cctct 200  Q
    |||||    
T  44437876 cctct 44437880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 3305898 - 3305936
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  3305898 tccaactcgttaatctctagatatttctttatagtttct 3305936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 19024371 - 19024333
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  19024371 tccaactcattaatctttagatctttcttaatagtttct 19024333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 43832291 - 43832253
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  43832291 tccaactcattaatctctagatccttcttaatagtttct 43832253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 2377275 - 2377210
Alignment:
Q  97 ataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    |||||||||||||||| |||||| |  | |||||||||||| |||||| || ||| ||||||||||    
T  2377275 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 2377210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 11412921 - 11412865
Alignment:
Q  105 ctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    |||||||||||||||||  | ||||||||||||||||||| || |||| |||||||||    
T  11412921 ctatcataaaccatatttggatccaactcattaatctcta-atctttcctaatagttt 11412865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 36616921 - 36616860
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagat 147  Q
    |||||||| | ||| ||||||||||||||| |||||  | || |||||||||||||||||||    
T  36616921 caaattacattatagtgttctatcataaactatattttgatctaactcattaatctctagat 36616860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 36650675 - 36650614
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagat 147  Q
    |||||||| | ||| ||||||||||||||| |||||  | || |||||||||||||||||||    
T  36650675 caaattacgttatagtgttctatcataaactatattttgatctaactcattaatctctagat 36650614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 42543428 - 42543358
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcctct 200  Q
    ||||||||||| ||||||||||  ||| |||||||||||    ||||||||||||| ||||||||| || |||||    
T  42543428 tccaactcatttatctctagatccttcctaatagtttct----cttatagtttttctaggtctacccctacctct 42543358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 45640615 - 45640652
Alignment:
Q  127 ccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  45640615 ccaacttattaatctctagatctttcttaatagtttct 45640652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 2906082 - 2906122
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttcttt 166  Q
    ||||||||||| ||||||| || ||||||||||||||||||    
T  2906082 tccaactcattgatctctacatttttcttaatagtttcttt 2906122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 7431980 - 7432016
Alignment:
Q  128 caactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||||||  |||||||||||||||    
T  7431980 caactcattaatctctagatccttcttaatagtttct 7432016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 9578773 - 9578840
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||| |||||| ||||||||||||| | |||||||||||||| | || || |||| |||||||||||    
T  9578773 cataatattctataataaaccatattaggatccaactcattaatttgtaaatttttc-taatagtttct 9578840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 37481676 - 37481744
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||| |||||||| | ||||||||    ||||||||||| ||| |||||| ||||||||||||||||    
T  37481676 cataattttctatcaaataccatatttttatccaactcatttatcgctagatctttcttaatagtttct 37481744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 101 - 200
Target Start/End: Original strand, 35643670 - 35643765
Alignment:
Q  101 tgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcctct 200  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||     |||||||||||||||||| |||||| |||||||||||    
T  35643670 tgttctatcataaaccatatttcgatccaactcattaatctctagatctttcttaata----atttctcttatagtttttctaggtcttcctctgcctct 35643765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 96 - 200
Target Start/End: Original strand, 30198325 - 30198425
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    |||||| ||||||||||||||||||| || ||||||||||||||||| | || ||||||||||     |||||||||||||||||| | |||||||||||    
T  30198325 cataatattctatcataaaccatattccgatccaactcattaatctcaatatctttcttaata----atttctcttatagtttttctaagtctacctctg 30198420  T
Q  196 cctct 200  Q
    |||||    
T  30198421 cctct 30198425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 16035776 - 16035854
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||| ||||||||||||| ||||||||||||| || ||||||| | ||||||||||||||||||||| |||||||    
T  16035776 caaattacgtcataatgttctaccataaaccatatttcgatccaactaagtaatctctagatatttcttaacagtttct 16035854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 24399835 - 24399916
Alignment:
Q  83 gaacaaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||| || ||||||| ||||||||||||||||||| |  ||||||||||||||||| ||||  |||||||||||||||    
T  24399835 gaacaaatgacatcataatattctatcataaaccatatttcaatccaactcattaatctcgagatccttcttaatagtttct 24399916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 17491713 - 17491814
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    ||||||||||||||||||||||||||  | ||||||||||||||||| |  | |||||||||||    ||||||||| |||||||| |||||| ||| ||    
T  17491713 cataatgttctatcataaaccatattttggtccaactcattaatctccaagtctttcttaatag----tttctcttacagtttttctaggtcttcctgtg 17491808  T
Q  196 cctctc 201  Q
    ||||||    
T  17491809 cctctc 17491814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 30559926 - 30559848
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||| ||||||||||||||||||||||||||   | ||||||||||||||||||| || |||| | |||||||||    
T  30559926 caaattacgtcataatgttctatcataaaccatatatggatccaactcattaatctctaaatctttcctgatagtttct 30559848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 30783091 - 30783169
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||| ||| |||||||||| ||| ||||||| |||| || |||||||||||||||||||||| ||||| ||||||||||    
T  30783091 caaactacctcataatgttttattataaaccgtatttcgatccaactcattaatctctagatctttctaaatagtttct 30783169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 36069823 - 36069758
Alignment:
Q  98 taatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttc 163  Q
    |||||||||||||||||||||||| |   |||||||||||||||||| |||||| |||||||||||    
T  36069823 taatgttctatcataaaccatatttctacccaactcattaatctctaaatatttgttaatagtttc 36069758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 195
Target Start/End: Original strand, 38391943 - 38392047
Alignment:
Q  87 aaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggt 186  Q
    |||||||  |||||| |||||||||| |||||||| || ||| |||||||||||| ||||| ||||||||| |    |||||| ||||||||||| ||||    
T  38391943 aaattacgccataatattctatcatataccatatttcgatcccactcattaatctgtagatctttcttaatgg----tttctcatatagtttttctaggt 38392038  T
Q  187 ctacctctg 195  Q
    || ||||||    
T  38392039 cttcctctg 38392047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 162
Target Start/End: Original strand, 41971848 - 41971915
Alignment:
Q  95 tcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    ||||||||||||||||||||| ||||| |  ||||||||||||||||||| || ||||||| ||||||    
T  41971848 tcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 41971915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 29520882 - 29520824
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctcta 144  Q
    ||||||||  ||||||||||||||||||||||||||  | |||||||||||||||||||    
T  29520882 caaattacgccataatgttctatcataaaccatatttggatccaactcattaatctcta 29520824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 43904714 - 43904772
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctcta 144  Q
    ||||||||  ||||||||||||||||||||||||||  | |||||||||||||||||||    
T  43904714 caaattacgccataatgttctatcataaaccatatttagatccaactcattaatctcta 43904772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 163
Target Start/End: Complemental strand, 490568 - 490491
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttc 163  Q
    ||||||||  ||||||||||||||||||||||||||  | |||||||||| |||||||| || |||| | ||||||||    
T  490568 caaattacgccataatgttctatcataaaccatatttggatccaactcatcaatctctaaatctttccttatagtttc 490491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 4011276 - 4011206
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcctct 200  Q
    |||||||||||||||| ||||| ||||||||||||    ||||||||||||||||| |||||| |||||| ||||    
T  4011276 tccaactcattaatctttagatctttcttaatagt----ttctcttatagtttttctaggtcttcctctgtctct 4011206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 16705971 - 16705902
Alignment:
Q  96 cataatgttctatc-ataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||||| ||| ||| |||||||| || |||||||||||||||||||| | ||||||||||||||||    
T  16705971 cataatgttccatccatataccatatttcgatccaactcattaatctctagctttttcttaatagtttct 16705902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 33827815 - 33827884
Alignment:
Q  95 tcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||| |||||||||||||||||||||  | ||||| |||||||||| || |||||| ||||||||||||    
T  33827815 tcatattgttctatcataaaccatatttagatccaattcattaatctataaatattttttaatagtttct 33827884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 35914650 - 35914760
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  ||||||||||||||||||||||||||  | ||||||||||||||||  |  | |||| ||||||    |||||||||||||||||| | |    
T  35914650 caaattacgccataatgttctatcataaaccatattttggtccaactcattaatcttcaagtctttcctaatag----tttctcttatagtttttctatg 35914745  T
Q  186 tctacctctgcctct 200  Q
    ||| |||||| ||||    
T  35914746 tcttcctctgtctct 35914760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 190
Target Start/End: Original strand, 39967558 - 39967648
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctac 190  Q
    |||||||||||| ||||||| ||||  |  ||||||||||||||| |||||| |||||||||||    |||||||||||||||||| ||| ||||    
T  39967558 cataatgttctaacataaactatatctcaatccaactcattaatcgctagatctttcttaatag----tttctcttatagtttttctaggcctac 39967648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 162
Target Start/End: Complemental strand, 42584592 - 42584516
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    |||||||| |||||||||||||||||||||||||||  | ||||| ||||||| || ||||| |||| | |||||||    
T  42584592 caaattacgtcataatgttctatcataaaccatatttggatccaaatcattaacctatagatctttccttatagttt 42584516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 32931183 - 32931084
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    ||||||||||||||||| |||||||| || |||||||||||||| || | || |||| ||||||    ||||||| |||||||||  |||||| ||||||    
T  32931183 cataatgttctatcatacaccatatttcg-tccaactcattaatttcaaaatctttcctaatag----tttctctgatagtttttttaggtcttcctctg 32931089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 35362699 - 35362807
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  ||||||||||||||||| |||||||| |  |||||||||||||| || | || |||| ||||||    ||||||  |||||||||| |||    
T  35362699 caaattacgccataatgttctatcatacaccatatttcagtccaactcattaatttccaaatctttcctaatag----tttctccgatagtttttctagg 35362794  T
Q  186 tctacctctgcct 198  Q
    ||| |||||||||    
T  35362795 tcttcctctgcct 35362807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 7615640 - 7615718
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||| ||||||| || |||||||||| ||||| || |||||||||||||| | || || |||||||||| |||||    
T  7615640 caaattacatcataatattttatcataaactatatttcgatccaactcattaatttttaaatttttcttaatattttct 7615718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 14459128 - 14459050
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  |||||||||| |||||||||||||||  | || |||||||||||||| | || |||| |||||||||||    
T  14459128 caaattacaccataatgttccatcataaaccatattttggtctaactcattaatctccaaatctttcctaatagtttct 14459050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 23023449 - 23023354
Alignment:
Q  95 tcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctct 194  Q
    ||||||| |||||||||| | ||| || |  |||||||||||||||| ||||| ||||||| |||    |||||||||||||||||| |||||| |||||    
T  23023449 tcataatattctatcatatatcatgttcctatccaactcattaatctgtagatctttcttagtag----tttctcttatagtttttctaggtcttcctct 23023354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 18737199 - 18737296
Alignment:
Q  98 taatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcc 197  Q
    |||||||| |||||||||||||||    ||||||||||||||||   ||| ||||| |||||    |||||||||||||||||  |||||||||||||||    
T  18737199 taatgttcgatcataaaccatattttaatccaactcattaatctaatgatttttctaaatag----tttctcttatagttttt-taggtctacctctgcc 18737293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 18742084 - 18742181
Alignment:
Q  98 taatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcc 197  Q
    |||||||| |||||||||||||||    ||||||||||||||||   ||| ||||| |||||    |||||||||||||||||  |||||||||||||||    
T  18742084 taatgttcaatcataaaccatattttaatccaactcattaatctaatgatttttctaaatag----tttctcttatagttttt-taggtctacctctgcc 18742178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 18747048 - 18747145
Alignment:
Q  98 taatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcc 197  Q
    |||||||| |||||||||||||||    ||||||||||||||||   ||| ||||| |||||    |||||||||||||||||  |||||||||||||||    
T  18747048 taatgttcaatcataaaccatattttaatccaactcattaatctaatgatttttctaaatag----tttctcttatagttttt-taggtctacctctgcc 18747142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 164
Target Start/End: Complemental strand, 79246 - 79182
Alignment:
Q  100 atgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||| |  ||||||| |  |||| ||||||||||||||||| ||||||||||||||||    
T  79246 atgttctatcacaggccatatttctatccagctcattaatctctagatctttcttaatagtttct 79182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 3638392 - 3638444
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagata 148  Q
    ||||||||||||||||| || ||||| |  |||||||||||||||||||||||    
T  3638392 cataatgttctatcatatactatatttctgtccaactcattaatctctagata 3638444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 10824242 - 10824294
Alignment:
Q  90 ttacttcataatgttctatcataaaccatattacgttccaactcattaatctc 142  Q
    ||||||||||||||||||||| ||||||||||  | ||||| |||||||||||    
T  10824242 ttacttcataatgttctatcaaaaaccatattttggtccaattcattaatctc 10824294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 11733970 - 11733902
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||| ||||||| | |||||||| |  || ||||||||||||||||||| |||||| |||||||||    
T  11733970 cataatgctctatcacataccatatttctatctaactcattaatctctagatttttctttatagtttct 11733902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 16917403 - 16917339
Alignment:
Q  99 aatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttc 163  Q
    |||||||||||||| |||||||| |  ||||||||||||||||||| || || ||| ||||||||    
T  16917403 aatgttctatcatataccatatttctatccaactcattaatctctaaatcttccttgatagtttc 16917339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 21425269 - 21425221
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctcta 144  Q
    ||||||| ||||||||||| |||||| || |||||||||||||||||||    
T  21425269 cataatggtctatcataaatcatatttcgatccaactcattaatctcta 21425221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 28169624 - 28169515
Alignment:
Q  87 aaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggt 186  Q
    |||||||  |||||| || ||||||||||||||||    ||||||||||||||||| | || |||| |||||||    ||||||||||||||||  ||||    
T  28169624 aaattacaccataatattttatcataaaccatatttgaatccaactcattaatctcaaaatctttcctaatagt----ttctcttatagtttttttaggt 28169529  T
Q  187 ctacctctgcctct 200  Q
    || ||||| |||||    
T  28169528 cttcctctacctct 28169515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 162
Target Start/End: Complemental strand, 33076357 - 33076282
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    |||||||| ||||||| |||||| ||||||||||||  | | ||||||||||||||||| || ||| ||||||||||    
T  33076357 caaattacatcataatattctattataaaccatattttggtacaactcattaatctctaaatcttt-ttaatagttt 33076282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 2216508 - 2216443
Alignment:
Q  97 ataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||||||||||||| ||||||| | ||||||||||| ||||||| ||  |||||||||||||||    
T  2216508 ataatgttctatcataaa-catattaggatccaactcattgatctctaaat-cttcttaatagtttct 2216443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 10079970 - 10080066
Alignment:
Q  100 atgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcctc 199  Q
    ||||||||||| | | |||||| |  |||||||||||||||||||||| |||||||| ||    ||| ||||||||||| || |||||| ||||| ||||    
T  10079970 atgttctatcaaatatcatatttctatccaactcattaatctctagatctttcttaacag----tttttcttatagtttctctaggtcttcctctacctc 10080065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 12692339 - 12692402
Alignment:
Q  136 taatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcctc 199  Q
    |||||||||| | |||||||||||||  ||||||||| |||||||| || ||| ||||||||||    
T  12692339 taatctctaggtctttcttaatagttagtttctcttacagtttttctagctcttcctctgcctc 12692402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 21121384 - 21121329
Alignment:
Q  81 atgaacaaattacttcataatgttctatcataaaccatattacgttccaactcatt 136  Q
    |||| ||||||||  |||| |||||||||||||||||||||| | |||||||||||    
T  21121384 atgatcaaattacgccatagtgttctatcataaaccatattaggatccaactcatt 21121329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 39388976 - 39388918
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtc 187  Q
    |||||||||||||||||||||| |||| ||||||||||| |   |||||||||||| |||||    
T  39388976 tccaactcattaatctctagatctttcctaatagtttctct---ttatagtttttctaggtc 39388918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 200
Target Start/End: Original strand, 45512558 - 45512654
Alignment:
Q  101 tgttctatcataaaccatattacgt-tccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcctc 199  Q
    |||||||||||||||||||||  |  || |||||||||||||| |  | |||| ||||||    |||||||||||||||||| |||||| ||||||||||    
T  45512558 tgttctatcataaaccatattttggatcgaactcattaatctccaagtctttcctaatag----tttctcttatagtttttctaggtcttcctctgcctc 45512653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 5908868 - 5908781
Alignment:
Q  97 ataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtct 188  Q
    |||| ||||||||||||| ||||||  | |||||||||||||||  | ||| ||| ||||||||    ||||||||||||||||| ||||||    
T  5908868 ataaggttctatcataaatcatattttgatccaactcattaatccttggatcttttttaatagt----ttctcttatagtttttctaggtct 5908781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 31716053 - 31715995
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctcta 144  Q
    ||||||||  |||||||||||||| |||||||||||  | ||||||| |||||||||||    
T  31716053 caaattacgccataatgttctatcttaaaccatatttggatccaactaattaatctcta 31715995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 45041365 - 45041442
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  |||||||  |||||||||||||||||  | ||||||||||||| ||||| || |||| |||||||||||    
T  45041365 caaattacgccataatgcgctatcataaaccatattg-gatccaactcattaacctctaaatctttcctaatagtttct 45041442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 38178349 - 38178419
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcctct 200  Q
    |||||||||||||| ||||| | ||| |||||||||||    |||||||||||||| |||||| ||||| |||||    
T  38178349 tccaactcattaatgtctaggtctttgttaatagtttc----tcttatagtttttctaggtcttcctctacctct 38178419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 5127393 - 5127429
Alignment:
Q  164 tttctcttatagtttttccaggtctacctctgcctct 200  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  5127393 tttctcttatagtttttctaggcctacctctgcctct 5127429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 9904941 - 9905009
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||| ||||||||||| ||||  | ||||| |||||||| |||| || ||| ||||||||||||    
T  9904941 cataatgttttatcataaaccttattttgatccaaatcattaatttctaaatctttattaatagtttct 9905009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 10109036 - 10108968
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||| | |||||  |  || ||||| ||||||||||||| ||||||| ||||||||    
T  10109036 cataatgttctatcatataacatatctctatcaaactcgttaatctctagatctttcttattagtttct 10108968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 16351569 - 16351533
Alignment:
Q  128 caactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||||||  |||||||||||||||    
T  16351569 caactcattaatctctagatccttcttaatagtttct 16351533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 1e-24; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 1569237 - 1569139
Alignment:
Q  98 taatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcc 197  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||||| |||||||||||    || ||||||||||||||| ||| |||||||||||    
T  1569237 taatgttctatcataaaccatattttgatccaactcattaatctctagatctttcttaatag----ttactcttatagtttttctaggactacctctgcc 1569142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 45601709 - 45601599
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  |||| |||||||||||||| ||||||  | |||||||||||||||||||||| ||||||||| |    |||||||||||||||||| |||    
T  45601709 caaattacaccatagtgttctatcataaatcatattttgatccaactcattaatctctagatctttcttaatgg----tttctcttatagtttttctagg 45601614  T
Q  186 tctacctctgcctct 200  Q
    ||| ||||| |||||    
T  45601613 tcttcctctacctct 45601599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 21517429 - 21517527
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    |||||||| |||||||||| ||||||||| ||||||  | ||||||| ||||||||||| |||||| |||||||    |||||||||||||||||| |||    
T  21517429 caaattacgtcataatgttatatcataaatcatatttggatccaacttattaatctctaaatattttttaatag----tttctcttatagtttttctagg 21517524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 28627982 - 28628092
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  |||||||||||||||||||||| |||    ||||||||||||||||||| || |||| ||||||    |||||||||||||||||| |||    
T  28627982 caaattacgccataatgttctatcataaaccacatttgcatccaactcattaatctctaaatctttcctaatag----tttctcttatagtttttctagg 28628077  T
Q  186 tctacctctgcctct 200  Q
    ||| ||||| |||||    
T  28628078 tcttcctctacctct 28628092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 38135262 - 38135372
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  |||||| ||||||||||| ||||||| || ||||||||||||||||||| || ||| |||||||    ||||||||||| |||||| |||    
T  38135262 caaattacgccataatattctatcataacccatatttcggtccaactcattaatctctaaatcttttttaatag----tttctcttatactttttctagg 38135357  T
Q  186 tctacctctgcctct 200  Q
    ||| | |||||||||    
T  38135358 tcttcatctgcctct 38135372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 30664781 - 30664721
Alignment:
Q  106 tatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttcttt 166  Q
    ||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||||||||    
T  30664781 tatcataaaccatgttatgatccaactcattaatctctagatctttcttaatagtttcttt 30664721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 26741943 - 26742055
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  |||||||||||||||||||||||||| || ||||||||||| || || | ||||||| ||||||||  | ||| | |||||||||| | |    
T  26741943 caaattacgccataatgttctatcataaaccatatttcggtccaactcatttatttccaaatatttcctaatagtt--tatctttgatagtttttctacg 26742040  T
Q  186 tctacctctgcctct 200  Q
    ||| |||||||||||    
T  26742041 tcttcctctgcctct 26742055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 27893622 - 27893688
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    ||||||||||||||||||| |||||| || |||| |||||||||||||| || ||||||||||||||    
T  27893622 cataatgttctatcataaaacatatttcggtccagctcattaatctctaaatctttcttaatagttt 27893688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 194
Target Start/End: Complemental strand, 12966239 - 12966145
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctct 194  Q
    ||||||| | ||||||| |||||||| |  ||||| ||||||||||||| |||||||||||||||    ||||||||||||||||| |||||| |||||    
T  12966239 cataatgatttatcatataccatatttctatccaaatcattaatctctaaatatttcttaatagt----ttctcttatagtttttctaggtcttcctct 12966145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 36101826 - 36101898
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaata 158  Q
    |||||||| |||||||||||||||||||||||||||  | |||||||||||||||| || || |||| |||||    
T  36101826 caaattacgtcataatgttctatcataaaccatattttgatccaactcattaatctataaatctttcataata 36101898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 37976458 - 37976391
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttc 163  Q
    ||||||||||||||||||||||||||  | ||||||||||||||||||| || |||| || |||||||    
T  37976458 cataatgttctatcataaaccatatttggatccaactcattaatctctaaatctttcatattagtttc 37976391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 5418289 - 5418224
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    |||||||||||||||||||||||||| || ||||||||||||| ||||  || ||||||||||||||    
T  5418289 cataatgttctatcataaaccatatttcggtccaactcattaa-ctcttaatctttcttaatagttt 5418224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 28542007 - 28542069
Alignment:
Q  100 atgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    |||||||||||||||||||| | |  ||||||||||||||||||| || ||||||||||||||    
T  28542007 atgttctatcataaaccatagttcaatccaactcattaatctctaaatctttcttaatagttt 28542069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 35922486 - 35922408
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||  |||||||||||||||||||| ||||||  | | ||||||||||| ||||| || ||||||||||||||||    
T  35922486 caaattaggtcataatgttctatcataaatcatatttagattcaactcattaacctctaaatctttcttaatagtttct 35922408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 36239845 - 36239936
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttc 181  Q
    ||||||||  ||||||||||||||||||| ||||||  | |||||||| |||||||||| || |||| ||||||||||    ||||||||||||||    
T  36239845 caaattacgccataatgttctatcataaagcatatttggatccaactcgttaatctctaaatttttcctaatagtttc----tcttatagtttttc 36239936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 24549754 - 24549815
Alignment:
Q  103 ttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||| | |||||||| |  |||||||||||||||||||||| ||||||||||||||||    
T  24549754 ttctatcaaataccatatttcaatccaactcattaatctctagatctttcttaatagtttct 24549815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 33732057 - 33731997
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaa 156  Q
    |||||||||||||||||||||||||| || ||  |||||||||||| ||||| ||||||||    
T  33732057 cataatgttctatcataaaccatatttcgatctcactcattaatctttagatctttcttaa 33731997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 34341444 - 34341504
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctaga 146  Q
    ||||||||  |||||||||||||||||||||||||| |  ||||||||||| |||||||||    
T  34341444 caaattacgccataatgttctatcataaaccatatttcaatccaactcattcatctctaga 34341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 9210753 - 9210856
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  ||||||||| ||||||||||||||||  | ||||||||||||| ||||| || |||| ||| ||||||    |||||||||||| | |||    
T  9210753 caaattacgccataatgttgtatcataaaccatatttggatccaactcattaacctctaaatttttcctaaaagtttc----tcttatagttttcctagg 9210848  T
Q  186 tctacctc 193  Q
    ||| ||||    
T  9210849 tcttcctc 9210856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 30144968 - 30144930
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  30144968 tccaactcattaatctctagatctttcttaatagtttct 30144930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 2882785 - 2882838
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaat 139  Q
    ||||||||  ||||||||||||||||||||||| || || ||||||||||||||    
T  2882785 caaattacgccataatgttctatcataaaccatgtttcgatccaactcattaat 2882838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 40979977 - 40980087
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  |||| |||||||||||||||||||||  | ||||||||||| | ||||| || |||  ||||||    |||||||||||||||| | |||    
T  40979977 caaattacgccatagtgttctatcataaaccatatttggatccaactcattgacctctaaatcttttctaatag----tttctcttatagttttcctagg 40980072  T
Q  186 tctacctctgcctct 200  Q
    ||| ||||| |||||    
T  40980073 tcttcctctacctct 40980087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 42187660 - 42187596
Alignment:
Q  99 aatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||||| |||  | ||||||| ||||||||||| ||||||| |||||||||||    
T  42187660 aatgttctatcataaacca-atttggatccaactaattaatctctaaatatttcctaatagtttct 42187596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 19262517 - 19262585
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||| | |||||  |  ||||||||||||||||||||||  |||| ||||||||||    
T  19262517 cataatgttctatcatatatcatatccctatccaactcattaatctctagatgcttctaaatagtttct 19262585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 28562425 - 28562493
Alignment:
Q  97 ataatgttctatcataaa-ccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||| ||||||||| |||||||| | |||||||| |||||||||| || |||| |||||||||||    
T  28562425 ataatgttatatcataaaaccatattaggatccaactcgttaatctctaaatctttcataatagtttct 28562493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 194
Target Start/End: Complemental strand, 36136986 - 36136893
Alignment:
Q  97 ataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctct 194  Q
    |||||||||||||||||||||||||  | ||||| |||||||  |||| || ||||  |||||    |||||||||||||||||| |||||| |||||    
T  36136986 ataatgttctatcataaaccatatttggatccaattcattaacatctaaatctttccaaatag----tttctcttatagtttttctaggtcttcctct 36136893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 43282042 - 43281986
Alignment:
Q  108 tcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||  | |||||||||||||||||||||| || |||||| ||||||    
T  43282042 tcataaaccatattttgatccaactcattaatctctagatcttacttaattgtttct 43281986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 22174223 - 22174123
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    ||||||||||||||| | |||||||| |  || || |||||||||||||||| ||| || ||||    |||||||||||||||||| | || | ||||||    
T  22174223 cataatgttctatcacataccatatttctatctaattcattaatctctagatctttgtttatag----tttctcttatagtttttctacgttttcctctg 22174128  T
Q  196 cctct 200  Q
    |||||    
T  22174127 cctct 22174123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 162
Target Start/End: Complemental strand, 28858269 - 28858202
Alignment:
Q  95 tcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    |||||| ||||||||||| |  ||||| |  ||||||| |||||||||||||| ||||||||||||||    
T  28858269 tcataacgttctatcatataaaatatttctatccaacttattaatctctagatctttcttaatagttt 28858202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 164
Target Start/End: Original strand, 29653638 - 29653673
Alignment:
Q  129 aactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||||| ||||||||||||||||    
T  29653638 aactcattaatctctagatctttcttaatagtttct 29653673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 141
Target Start/End: Original strand, 30814174 - 30814229
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatct 141  Q
    |||||||| | |||||||||||||||||| |||||| || ||||||| ||||||||    
T  30814174 caaattacgtgataatgttctatcataaaacatatttcgatccaactaattaatct 30814229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 33103144 - 33103101
Alignment:
Q  101 tgttctatcataaaccatattacgttccaactcattaatctcta 144  Q
    ||||||||||||||||||||| || | |||||||||||||||||    
T  33103144 tgttctatcataaaccatattccgattcaactcattaatctcta 33103101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 34926587 - 34926645
Alignment:
Q  102 gttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttc 163  Q
    |||||||||||||||||||| || ||||||||    |||||||||| |||||||||||||||    
T  34926587 gttctatcataaaccatatttcgatccaactc---tatctctagatctttcttaatagtttc 34926645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 47848896 - 47848797
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    ||||||||||||||||||||||||||  | |||| |||||||||| | | || ||||  |||||    |||||||||||||||||| || ||| ||||||    
T  47848896 cataatgttctatcataaaccatatttggatccagctcattaatccccaaatctttc-caatag----tttctcttatagtttttctagttcttcctctg 47848802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 14057711 - 14057633
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  ||||||||||||||||||||||||||    || ||| |||||| ||||| || |||| |||||||||||    
T  14057711 caaattaccccataatgttctatcataaaccatatttgaatcgaacgcattaacctctaaatctttcctaatagtttct 14057633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 14367739 - 14367661
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  ||||||||||||||||||||||||||    || ||| |||||| ||||| || |||| |||||||||||    
T  14367739 caaattaccccataatgttctatcataaaccatatttgaatcgaacgcattaacctctaaatctttcctaatagtttct 14367661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 30814771 - 30814830
Alignment:
Q  137 aatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcctct 200  Q
    ||||||||||| |||||||||||||||    ||||||||| |||| |||||| |||||||||||    
T  30814771 aatctctagatctttcttaatagtttc----tcttatagtgtttctaggtcttcctctgcctct 30814830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 40138997 - 40139075
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||| || ||||||| ||||||||||   |||||| |  || ||| ||||||||||||||| ||||||||||||||||    
T  40138997 caaatgacgtcataatattctatcatatgtcatatttctatcaaacgcattaatctctagatctttcttaatagtttct 40139075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 40391872 - 40391930
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctcta 144  Q
    ||||||||  |||||||||||||||||| ||||||| || ||||||| |||||| ||||    
T  40391872 caaattacgccataatgttctatcataagccatatttcggtccaacttattaatttcta 40391930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 47796201 - 47796279
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  |||||| ||||||||||||||||||| |  ||||||| |||||| |||| || |||| |||||| ||||    
T  47796201 caaattacgccataatattctatcataaaccatatttcagtccaacttattaatttctaaatctttcctaataggttct 47796279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 5577546 - 5577594
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctcta 144  Q
    |||||||||||||||||||||||| |  | |||||||||||| ||||||    
T  5577546 cataatgttctatcataaaccatacttggatccaactcattagtctcta 5577594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 30200023 - 30200083
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaa 156  Q
    ||||||| ||||||||| ||||||||    || ||||||||||||||||||| ||||||||    
T  30200023 cataatggtctatcatataccatatttatatcaaactcattaatctctagatctttcttaa 30200083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 187
Target Start/End: Complemental strand, 43282626 - 43282545
Alignment:
Q  102 gttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtc 187  Q
    ||||||| |||||||||||| || ||||||||| ||| ||| |||  || |||||||||    ||||||||||||||||| |||||    
T  43282626 gttctataataaaccatatttcgatccaactcaataacctcaagaacttacttaatagt----ttctcttatagtttttctaggtc 43282545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 46973781 - 46973720
Alignment:
Q  130 actcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    |||||||||||||||||| ||| ||||||||    |||||||| |||||||| ||||||| |||||    
T  46973781 actcattaatctctagatgtttattaatagt----ttctcttacagtttttcaaggtctatctctg 46973720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 1e-24; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 34554 - 34664
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  |||||||||||||||||||||||||| |  |||||||||||||||| ||||| ||||||||| |    |||||||||||||||||| |||    
T  34554 caaattacgccataatgttctatcataaaccatatttcaatccaactcattaatctttagatctttcttaatgg----tttctcttatagtttttctagg 34649  T
Q  186 tctacctctgcctct 200  Q
    ||| |||||||||||    
T  34650 tcttcctctgcctct 34664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 24666044 - 24665966
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||  ||||||||||||||||||||||||||| || ||||||||||| | ||||| |||||||||||||||||||    
T  24666044 caaattaagtcataatgttctatcataaaccatatttcgatccaactcattgacctctaaatatttcttaatagtttct 24665966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 96 - 200
Target Start/End: Original strand, 9593767 - 9593867
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    ||||||||||||||||||||||||||  | |||||||||||||||||||  | |||| ||||||    ||||||||||| |||||| |||||| |||||     
T  9593767 cataatgttctatcataaaccatattgggatccaactcattaatctctaagtctttcctaatag----tttctcttataatttttctaggtcttcctcta 9593862  T
Q  196 cctct 200  Q
    |||||    
T  9593863 cctct 9593867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 200
Target Start/End: Original strand, 33997603 - 33997703
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    |||||||||| |||||  |||||||| |  ||||||||||||||||||||   |||||||||||    |||||||||||||||| | |||||| ||||||    
T  33997603 cataatgttcaatcatgtaccatatttctatccaactcattaatctctaggcttttcttaatag----tttctcttatagttttccaaggtcttcctctg 33997698  T
Q  196 cctct 200  Q
    |||||    
T  33997699 cctct 33997703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 8364789 - 8364711
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  ||||||||||||||||||||||| || |  ||||||| |||||| |||| || ||||||||||||||||    
T  8364789 caaattacgccataatgttctatcataaaccatgtttcagtccaacttattaatttctaaatctttcttaatagtttct 8364711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 5096067 - 5095957
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  ||||||||||||||||||||||||||  | ||||||||||||| | ||| || |||| ||| ||    |||||||| ||||||||| |||    
T  5096067 caaattacgccataatgttctatcataaaccatattttgatccaactcattaaccactaaatctttcctaagag----tttctcttctagtttttctagg 5095972  T
Q  186 tctacctctgcctct 200  Q
    ||| ||||| |||||    
T  5095971 tcttcctctacctct 5095957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 31818764 - 31818666
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  |||||||||||||||||||||||| |  | ||||||||||||||||| | |  |||| |||||||    ||||||||||||||||| |||    
T  31818764 caaattacgacataatgttctatcataaaccatactttgatccaactcattaatctccaaacctttcctaatagt----ttctcttatagtttttctagg 31818669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 6293451 - 6293519
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||| ||||||||| |||||||| |  || ||||||||||| |||||||||||| |||||||||||    
T  6293451 cataatgctctatcatataccatatttctatctaactcattaatatctagatatttcctaatagtttct 6293519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 1748006 - 1748072
Alignment:
Q  98 taatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||| || ||||| |  ||||||||||||||||||| || ||||||| ||||||||    
T  1748006 taatgttctatcatatactatatttctatccaactcattaatctctaaatttttcttagtagtttct 1748072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 31831920 - 31831986
Alignment:
Q  99 aatgttctatcataaa-ccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||||||||||| |||| ||  | ||||||||| |||||||||||| ||||||||||||||||    
T  31831920 aatgttctatcataaaaccatgtttggatccaactcagtaatctctagatctttcttaatagtttct 31831986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 35199682 - 35199751
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttcttt 166  Q
    ||||||||||||||||| || ||||| |  || ||||||||||||||||||| |||| |||||||||||||    
T  35199682 cataatgttctatcatatac-atatttctatctaactcattaatctctagatctttcctaatagtttcttt 35199751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 43102 - 43179
Alignment:
Q  87 aaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||  ||||||  |||||||||||| |||||  | |||||||||||| ||||||||| ||| ||||||||||||    
T  43102 aaattacaccataatactctatcataaactatattttgatccaactcattactctctagatctttattaatagtttct 43179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 33080368 - 33080319
Alignment:
Q  97 ataatgttctatcataaaccatattacgttccaactcattaatctctaga 146  Q
    |||||||| |||||||||||||||| || | |||||||||||||||||||    
T  33080368 ataatgttatatcataaaccatatttcgatacaactcattaatctctaga 33080319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 3210557 - 3210616
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctag 145  Q
    ||||||||  ||||||||||||||||||  |||||| |  ||||||||||||||||||||    
T  3210557 caaattacaccataatgttctatcataactcatatttccatccaactcattaatctctag 3210616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 121
Target Start/End: Original strand, 7513039 - 7513074
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatatt 121  Q
    |||||||| |||||||||||||||||||||||||||    
T  7513039 caaattacgtcataatgttctatcataaaccatatt 7513074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 14389222 - 14389288
Alignment:
Q  98 taatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||| ||||||||||||||||  | || |||| ||||||||||| || |||||||| |||||||    
T  14389222 taatgttatatcataaaccatatttggatctaacttattaatctctaaatctttcttaagagtttct 14389288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 655456 - 655521
Alignment:
Q  99 aatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||| |||||||||||||| || ||||| ||||||||||| | |  |||| |||||||||||    
T  655456 aatgttctgtcataaaccatatttcggtccaattcattaatctcgaaagttttcctaatagtttct 655521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 1681611 - 1681648
Alignment:
Q  127 ccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||||||||||||||||  |||||||||||||||    
T  1681611 ccaactcattaatctctagatccttcttaatagtttct 1681648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 1747730 - 1747800
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcctct 200  Q
    ||||||||||||||||||||||  ||||||  ||    |||||||||| ||||||| |||||| |||||||||||    
T  1747730 tccaactcattaatctctagatccttcttaccag----tttctcttatggtttttctaggtcttcctctgcctct 1747800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 5e-21; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 25575057 - 25574982
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtt 161  Q
    ||||||||  || ||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||    
T  25575057 caaattacaccacaatgttctatcataaaccatatttcgatccaactcattaatctctagatctttcttaatagtt 25574982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 44385063 - 44384988
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtt 161  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||| |||||||||||||| |||||||||||||    
T  44385063 caaattacatcataatgttctatcataaaccatattaatatccaacttattaatctctagatctttcttaatagtt 44384988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 106 - 198
Target Start/End: Complemental strand, 50680953 - 50680865
Alignment:
Q  106 tatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcct 198  Q
    |||||||||||||||| || |||||||||||||||||||||| ||||| ||||     |||||||||||||||||| ||||||||||||||||    
T  50680953 tatcataaaccatattccgatccaactcattaatctctagatctttctaaata----atttctcttatagtttttctaggtctacctctgcct 50680865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 26024900 - 26024977
Alignment:
Q  87 aaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||  ||||||||||||||||||||||| |  || |||||||||||||||||||||| ||||||||||||||||    
T  26024900 aaattacaccataatgttctatcataaaccatgtctcgatccaactcattaatctctagatctttcttaatagtttct 26024977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 30621260 - 30621328
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||||||||||||||||||||| || |||||| |||||||||||| || ||||||||||||||||    
T  30621260 cataatgttctatcataaaccatatttcggtccaacacattaatctctaaatctttcttaatagtttct 30621328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 55007979 - 55007907
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaata 158  Q
    |||||||| |||||||| |||||||||||||||||| || ||||||||||||||||||| || ||||||||||    
T  55007979 caaattacgtcataatgatctatcataaaccatatttcggtccaactcattaatctctaaatctttcttaata 55007907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 86 - 198
Target Start/End: Complemental strand, 37488324 - 37488216
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  ||||||| |||||||| |||||||||  | || |||| |||||| ||||||| ||||||||||||    ||||||||||||||||| |||    
T  37488324 caaattacgccataatgctctatcattaaccatattttgatcaaacttattaatttctagatctttcttaatagt----ttctcttatagtttttctagg 37488229  T
Q  186 tctacctctgcct 198  Q
    |||||||||||||    
T  37488228 tctacctctgcct 37488216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 97 - 200
Target Start/End: Original strand, 7681970 - 7682069
Alignment:
Q  97 ataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgc 196  Q
    ||||||| |||||||| |||||||| |  || ||||||||||||| ||||| |||||| ||||||||    ||||||||||||||||||||| |||||||    
T  7681970 ataatgtcctatcatataccatatttctatctaactcattaatctatagatttttcttgatagtttc----tcttatagtttttccaggtcttcctctgc 7682065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 47147594 - 47147496
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    ||||||||||||||||| | |||||  |  |||||||||||||||||||||| |||||||||||||||||     ||||||||||| |||||| ||||||    
T  47147594 cataatgttctatcatatatcatat--ctatccaactcattaatctctagatctttcttaatagtttcttc----tatagtttttctaggtcttcctctg 47147501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 42639079 - 42639147
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||| | |||||||| |  ||||||||||||||| |||||| ||||||||||||||||    
T  42639079 cataatgttctatcaaataccatatttctatccaactcattaatcgctagatctttcttaatagtttct 42639147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 2557732 - 2557799
Alignment:
Q  97 ataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||||||||||| || |||||||| |||||||  ||||  |||||||||||||||    
T  2557732 ataatgttctatcataaaccatatttcgatccaactcgttaatcttcagatccttcttaatagtttct 2557799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 200
Target Start/End: Original strand, 13805324 - 13805424
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    |||||||||||||||||||||||||| |  ||||||| |||| |||| | || |||||| ||||    |||||||||||||||||| |||| | ||||||    
T  13805324 cataatgttctatcataaaccatatttccgtccaacttattactctcaaaatctttcttcatag----tttctcttatagtttttctaggttttcctctg 13805419  T
Q  196 cctct 200  Q
    |||||    
T  13805420 cctct 13805424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 40420263 - 40420339
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||| || ||||||||||||||||||||||||| | | ||||||||||||||||  || ||| ||||||||||||    
T  40420263 caaattacgtcgtaatgttctatcataaaccatattaggattcaactcattaatctct--attttttttaatagtttct 40420339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 47372874 - 47372774
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    ||||||||||||| ||| |||||||| |  |||||||||||||||||| ||| ||| ||| |||    ||||||||||||||||  || |||||||||||    
T  47372874 cataatgttctataatataccatatttctatccaactcattaatctctggatctttattagtag----tttctcttatagttttctcaagtctacctctg 47372779  T
Q  196 cctct 200  Q
    |||||    
T  47372778 cctct 47372774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 53540513 - 53540413
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    ||||||||||||||||||||||||||    ||||||||||||||||| |  | |||| ||||||    ||| |||||||||||||| |||||| ||||||    
T  53540513 cataatgttctatcataaaccatatttttgtccaactcattaatctccaagtctttcctaatag----tttatcttatagtttttctaggtcttcctctg 53540418  T
Q  196 cctct 200  Q
    |||||    
T  53540417 cctct 53540413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 26024988 - 26025046
Alignment:
Q  106 tatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||| |  || |||||||||||||||||||||| ||||||||||||||||    
T  26024988 tatcataaaccatgtctcgatccaactcattaatctctagatctttcttaatagtttct 26025046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 31339748 - 31339690
Alignment:
Q  95 tcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttct 153  Q
    |||||||||||||||||  |||||||| || ||||||||||||||||||||||| ||||    
T  31339748 tcataatgttctatcatgtaccatatttcgatccaactcattaatctctagataattct 31339690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 45204900 - 45204991
Alignment:
Q  98 taatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctc 193  Q
    ||||||||||||||||||||||||  | ||||||| ||||| ||||| || |||| ||||||    |||||||||||||||||| |||||| ||||    
T  45204900 taatgttctatcataaaccatatttggatccaacttattaaactctaaatctttcctaatag----tttctcttatagtttttctaggtcttcctc 45204991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 51421963 - 51421885
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||| |||||||||||||||||||||||| ||  | ||||| ||||||| ||||| || |||| |||||||||||    
T  51421963 caaattacgtcataatgttctatcataaaccatttttggatccaattcattaacctctaaatctttcctaatagtttct 51421885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 27049221 - 27049301
Alignment:
Q  81 atgaacaaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtt 161  Q
    |||| ||||||||  |||||||||| |||||||||||||||  |  ||||||||||||||| || || |||||||||||||    
T  27049221 atgaccaaattacgccataatgttcgatcataaaccatatttggaaccaactcattaatctataaatctttcttaatagtt 27049301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 34208328 - 34208376
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctcta 144  Q
    ||||||||||||||||||||||||||  | |||||||||||||||||||    
T  34208328 cataatgttctatcataaaccatatttggatccaactcattaatctcta 34208376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 37042723 - 37042791
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||| | ||| |||| |  ||||||||| |||||||||||| ||||||||||||||||    
T  37042723 cataatgttctatcaaataccgtatttctatccaactcaataatctctagatctttcttaatagtttct 37042791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 200
Target Start/End: Original strand, 20105577 - 20105677
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    |||||||| |||||||| |||||||| |  |||||||||| ||||||||||| ||||||| | |||||||    ||||||||||||  | ||||| ||||    
T  20105577 cataatgtcctatcatataccatatttcagtccaactcatcaatctctagatctttcttagtcgtttctt----ttatagtttttctggatctacatctg 20105672  T
Q  196 cctct 200  Q
    |||||    
T  20105673 cctct 20105677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 31043290 - 31043227
Alignment:
Q  101 tgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||||| ||||||||||  | ||||||||||||||||||| || |||| |||||||||||    
T  31043290 tgttctatcacaaaccatatttggatccaactcattaatctctaaatctttcctaatagtttct 31043227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 143
Target Start/End: Complemental strand, 34379626 - 34379579
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctct 143  Q
    |||||| ||||||||||||||||||| || ||||||||||||||||||    
T  34379626 cataatattctatcataaaccatatttcggtccaactcattaatctct 34379579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 159
Target Start/End: Complemental strand, 41192284 - 41192221
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatag 159  Q
    |||||||||||| |||| |||||||| |  |||||||||||||||||||||| |||||| ||||    
T  41192284 cataatgttctaccatataccatatttctatccaactcattaatctctagatctttctttatag 41192221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 50662611 - 50662515
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    ||||||||  |||||||||||||||| || || ||||||||||||||||||| ||| | ||||     ||||||||||| |||||| ||| |||||||||    
T  50662611 cataatgtgttatcataaaccatatttcgatcaaactcattaatctctagatctttttaaata----atttctcttataatttttctaggactacctctg 50662516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 56439631 - 56439698
Alignment:
Q  97 ataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||||||||||| || ||||||| |||||| || | || |||| |||||||||||    
T  56439631 ataatgttctatcataaaccatatttcgatccaactaattaatttccaaatctttcataatagtttct 56439698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 29182645 - 29182607
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  29182645 tccaactcattaatctctagatacttcttaatagtttct 29182607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 5306529 - 5306468
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagat 147  Q
    ||||||||  ||||||||| | ||||||||||||||  | ||||||||||||||||||||||    
T  5306529 caaattacgccataatgttatgtcataaaccatatttggatccaactcattaatctctagat 5306468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 10209229 - 10209171
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtct 188  Q
    ||||||||||||||||||||||  |||||||||||    ||||||||||||||||| ||||||    
T  10209229 tccaactcattaatctctagatccttcttaatagt----ttctcttatagtttttctaggtct 10209171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 29399037 - 29398984
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaat 139  Q
    ||||||||  ||||||||||||||||||||| |||| ||||||||||| |||||    
T  29399037 caaattacgccataatgttctatcataaaccttatttcgttccaactcgttaat 29398984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 31961355 - 31961425
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcctct 200  Q
    ||||||||||| |||||||||| |||| ||||||    |||||||||||||||||| ||||||||| || |||||    
T  31961355 tccaactcatttatctctagatctttcctaatag----tttctcttatagtttttctaggtctacccctacctct 31961425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 45569098 - 45569168
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcctct 200  Q
    ||||||||||| |||||||||| |||||||||||    ||||||||||| | |||| |||||| |||||||||||    
T  45569098 tccaactcattgatctctagatttttcttaatag----tttctcttataatgtttctaggtcttcctctgcctct 45569168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 55388260 - 55388333
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatag 159  Q
    ||||||||  || |||||||||||||||| |||||| || || |||||||||||||| | || |||||||||||    
T  55388260 caaattacaccacaatgttctatcataaatcatatttcgatctaactcattaatctccaaatctttcttaatag 55388333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 934490 - 934558
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||| | ||||   |  |||||||||||||||||||||  ||||||||||||||||    
T  934490 cataatgttctatcatatatcataaccctatccaactcattaatctctagaactttcttaatagtttct 934558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 6843838 - 6843774
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagt 160  Q
    ||||||||||||| ||| | |||||| |  || ||||||||||||||||||| ||||||||||||    
T  6843838 cataatgttctattatataacatatttctatcaaactcattaatctctagatctttcttaatagt 6843774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 7544602 - 7544650
Alignment:
Q  116 catattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||| || || ||||||||||||||||||| ||||||||||||||||    
T  7544602 catatttcgatcaaactcattaatctctagatctttcttaatagtttct 7544650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 21945701 - 21945765
Alignment:
Q  100 atgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||||||||||||||||| |  |||||||||||||| || | || |||| |||||||||||    
T  21945701 atgttctatcataaaccatatttcagtccaactcattaatttccaaatctttcctaatagtttct 21945765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 26037564 - 26037632
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||| |||||||||||||||||||||  | ||||||||||| | ||||| || |||| |||||||||||    
T  26037564 catagtgttctatcataaaccatatttggatccaactcattcacctctaaatctttcctaatagtttct 26037632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 200
Target Start/End: Original strand, 34233086 - 34233183
Alignment:
Q  99 aatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcct 198  Q
    |||||||||||||||||| ||||  | || ||||||||||||||||| | ||| | |||||    ||||||| |||||||||| |||| | |||||||||    
T  34233086 aatgttctatcataaaccttattttgatctaactcattaatctctaggtctttatgaatag----tttctctgatagtttttctaggttttcctctgcct 34233181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 49987640 - 49987531
Alignment:
Q  87 aaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggt 186  Q
    |||||||  ||||||| |||||||| ||||||| |  | |||| |||||| ||||| |  | ||||||||||||||||    ||||||||||||| ||||    
T  49987640 aaattacgccataatgctctatcatgaaccatagttggatccatctcatttatctccaagtctttcttaatagtttct----cttatagtttttctaggt 49987545  T
Q  187 ctacctctgcctct 200  Q
    || |||||||||||    
T  49987544 cttcctctgcctct 49987531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 162
Target Start/End: Original strand, 53518372 - 53518448
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    ||||||||  |||| |||||||||||||||||||||  | ||||||||||||| ||||| || |||| || ||||||    
T  53518372 caaattacgccatagtgttctatcataaaccatatttagatccaactcattaacctctaaatctttcctattagttt 53518448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 55300638 - 55300582
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctc 142  Q
    |||||||||||| |||||||||||||||| ||||||  |  ||||||||||||||||    
T  55300638 caaattacttcaaaatgttctatcataaaacatattttgaaccaactcattaatctc 55300582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 188
Target Start/End: Original strand, 8599000 - 8599088
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtct 188  Q
    ||||||||||||||| | ||| |||| | ||| ||||||||||  | ||||| |||||||||||    |||||||||||||||||| ||||||    
T  8599000 cataatgttctatcaaataccttatttctttctaactcattaacatttagatctttcttaatag----tttctcttatagtttttctaggtct 8599088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 188
Target Start/End: Complemental strand, 21107215 - 21107127
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtct 188  Q
    ||||| ||||||||||||||||||||  | ||||||| ||||||| ||| |  |||| |||||||    ||||||||||||||||| ||||||    
T  21107215 cataaagttctatcataaaccatatttggatccaactaattaatcactaaaactttcctaatagt----ttctcttatagtttttctaggtct 21107127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 44047440 - 44047491
Alignment:
Q  106 tatcataaaccatattacgttccaactcattaatctctagatatttcttaat 157  Q
    ||||||| |||||||||   |||||||||||||||||||||| |||||||||    
T  44047440 tatcatataccatattattatccaactcattaatctctagatctttcttaat 44047491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 51438678 - 51438623
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatct 141  Q
    ||||||||  ||||||||| ||| |||||||||||| | |||||||||||||||||    
T  51438678 caaattacgccataatgttatattataaaccatatttcattccaactcattaatct 51438623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 31403093 - 31403159
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    ||||||| ||||||||| |||| ||| |  ||||||| |||||||||||||| |||| |||||||||    
T  31403093 cataatgctctatcatataccacatttctatccaactaattaatctctagatctttcataatagttt 31403159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 31459217 - 31459151
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    |||||||||| |||| | ||||||||  | ||||||||||||||||||| || |||| |||||||||    
T  31459217 cataatgttcaatcacacaccatattgggatccaactcattaatctctaaatctttcctaatagttt 31459151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 32339782 - 32339716
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    |||||| |||||||||| | |||||  |  |||||||| ||||||||||| ||||||||||||||||    
T  32339782 cataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 32339716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 42293326 - 42293392
Alignment:
Q  98 taatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||| ||||||||| |||||||  |  || ||||||||||| ||||||| ||||||||||||||||    
T  42293326 taatgctctatcatataccatatgtctatctaactcattaatttctagatctttcttaatagtttct 42293392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 50967077 - 50967154
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  |||||| |||| ||||| |||||| | | |||||||||||| |||||||| | ||||||||||||||||    
T  50967077 caaattacgacataattttctttcatataccatactgcattccaactcattgatctctag-tctttcttaatagtttct 50967154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 181
Target Start/End: Original strand, 21214644 - 21214726
Alignment:
Q  95 tcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttc 181  Q
    |||||||| ||||||||| | |||||| |  |||||||||||| ||| ||||  |||||||||||||||    ||||||||||||||    
T  21214644 tcataatgctctatcatacatcatatttctctccaactcattactctatagacctttcttaatagtttc----tcttatagtttttc 21214726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 22420776 - 22420844
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctt 165  Q
    ||||||| ||||||||  |||||||  |  |||||||||||||||||||||| |||||| ||||||||||    
T  22420776 cataatgctctatcatttaccatatctctatccaactcattaatctctagatctttctt-atagtttctt 22420844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 31897517 - 31897587
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcctct 200  Q
    ||||||||||| ||||||||||  ||| ||||||||||    |||||||||||||| ||||||||| || |||||    
T  31897517 tccaactcatttatctctagatccttcctaatagtttc----tcttatagtttttctaggtctacccctacctct 31897587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 33710150 - 33710079
Alignment:
Q  96 cataatgttctatcata---aaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||| |   ||||||||| |  ||||||||||||||||||||||   ||||||||||||||    
T  33710150 cataatgttctatcaaatagaaccatatttctatccaactcattaatctctagatcagtcttaatagtttct 33710079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 46372217 - 46372147
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcctct 200  Q
    ||||||||||| ||||||||||  ||| |||||||||||    ||||||||||||| ||||||||| || |||||    
T  46372217 tccaactcatttatctctagatccttcctaatagtttct----cttatagtttttctaggtctacccctacctct 46372147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 2589295 - 2589227
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||| |||||||||| ||||||||||    ||||||||||||||||||||||   |||| |||||||||    
T  2589295 catagtgttctatcaaaaaccatattttcatccaactcattaatctctagatccatcttgatagtttct 2589227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 26510611 - 26510563
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctcta 144  Q
    ||||||||||||||  ||||||||||  | |||||||||||||||||||    
T  26510611 cataatgttctatcgcaaaccatatttggatccaactcattaatctcta 26510563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 40018250 - 40018314
Alignment:
Q  98 taatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    ||||||||||||||| | |||||  |  ||||||||||| |||||||||| |||||||| |||||    
T  40018250 taatgttctatcatatatcatatccctatccaactcattgatctctagatctttcttaacagttt 40018314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 5e-21; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 96 - 188
Target Start/End: Complemental strand, 40416594 - 40416506
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtct 188  Q
    |||||||||||||||||||||||||| || |||||||||||||||| ||||| |||||||||||    ||| |||||||||||||| ||||||    
T  40416594 cataatgttctatcataaaccatatttcgatccaactcattaatctatagatctttcttaatag----tttgtcttatagtttttctaggtct 40416506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 43375647 - 43375722
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtt 161  Q
    |||||||  ||||||||||||||||| ||||||||| || ||||||||||||||||||| || |||||||||||||    
T  43375647 caaattatgtcataatgttctatcatgaaccatatttcggtccaactcattaatctctaaatctttcttaatagtt 43375722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 52532665 - 52532743
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  ||||||||||||||||||||||||||  |||||||||||||||| |||| || |||| |||||||||||    
T  52532665 caaattacgccataatgttctatcataaaccatattttgttccaactcattaatttctaaatctttcctaatagtttct 52532743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 194
Target Start/End: Original strand, 3818915 - 3819009
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctct 194  Q
    |||||||||| ||||||||||||||| |  | ||||||||||||||||| || |||||||||||    |||||||||||||||||| |||||| |||||    
T  3818915 cataatgttccatcataaaccatatttctattcaactcattaatctctaaatctttcttaatag----tttctcttatagtttttcaaggtcttcctct 3819009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 8796441 - 8796364
Alignment:
Q  87 aaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||  |||||||||||||||||||||||||| |  ||||| |||||||| ||||||| ||||||||||||||||    
T  8796441 aaattacgccataatgttctatcataaaccatatttcaatccaagtcattaatatctagatctttcttaatagtttct 8796364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 990518 - 990585
Alignment:
Q  97 ataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||||||||||   | |||||||||||||||||||||| | ||| ||||||||||    
T  990518 ataatgttctatcataaaccatatgttgatccaactcattaatctctagatctatctcaatagtttct 990585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 6025824 - 6025728
Alignment:
Q  100 atgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcctc 199  Q
    ||||||||||| | |||||||| |  |||||||||||||||||||||| ||| ||| |||    | |||||||||||||||| |||||| ||||||||||    
T  6025824 atgttctatcagataccatatttctatccaactcattaatctctagatcttttttactag----tatctcttatagtttttctaggtcttcctctgcctc 6025729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 38869105 - 38869005
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    ||||||||||||||||| |||||||  |  |||||| |||||||| |||||| ||||||||||     |||||||||||||||||| |||||| | ||||    
T  38869105 cataatgttctatcatataccatatatctatccaacccattaatcgctagatctttcttaata----atttctcttatagtttttctaggtcttcttctg 38869010  T
Q  196 cctct 200  Q
    |||||    
T  38869009 cctct 38869005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 162
Target Start/End: Original strand, 13827638 - 13827707
Alignment:
Q  95 tcataatgttctatcataaaccatattacgttccaactcattaatctctaga--tatttcttaatagttt 162  Q
    |||||||||||||||||| |||||||| |  |||||||||||||||||||||  | ||||||||||||||    
T  13827638 tcataatgttctatcatataccatatttctatccaactcattaatctctagacttttttcttaatagttt 13827707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 27520256 - 27520334
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||| |||||||||||||||||||| ||||||  | |||| |||||||||||||| || |||  |||||||||||    
T  27520256 caaattacatcataatgttctatcataaatcatatttggatccagctcattaatctctaaattttttctaatagtttct 27520334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 29577202 - 29577267
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    |||||||||||||||||| |||||||  | |||| ||||||||||||||||| ||||||||||||||    
T  29577202 cataatgttctatcataa-ccatattttgatccagctcattaatctctagatctttcttaatagttt 29577267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 41560462 - 41560384
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  |||||||||||||||||| |||||||  | ||||||||||||||||||| || | || |||||||||||    
T  41560462 caaattacgccataatgttctatcataacccatatttggatccaactcattaatctctaaatgtatcctaatagtttct 41560384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 9599443 - 9599553
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  ||||| |||||||||||||||||||   | || |||||||||| ||||| ||||||| ||||||    |||||||| ||||||||| |||    
T  9599443 caaattacgccataacgttctatcataaaccatatctggatcaaactcattaaactctaaatatttcctaatag----tttctcttgtagtttttctagg 9599538  T
Q  186 tctacctctgcctct 200  Q
    ||| ||||| |||||    
T  9599539 tcttcctctacctct 9599553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 10569131 - 10569200
Alignment:
Q  97 ataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttcttt 166  Q
    |||||||||||||||| || ||||| |  |||| || |||||||||||||| ||||||||||||||||||    
T  10569131 ataatgttctatcatatacgatatttctatccagcttattaatctctagatctttcttaatagtttcttt 10569200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 42501329 - 42501231
Alignment:
Q  98 taatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcc 197  Q
    |||||||||||||||  ||||||| |  |||||||||||||||| ||||| ||||||||||     |||||||||||||||||| |||| | ||||| ||    
T  42501329 taatgttctatcatattccatatttctatccaactcattaatctatagatctttcttaata----atttctcttatagtttttctaggttttcctctacc 42501234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 51812741 - 51812664
Alignment:
Q  87 aaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||  |||||| ||||||||||||||||||| || || ||||||||||  ||||||| |||||||| |||||||    
T  51812741 aaattacggcataatattctatcataaaccatatttcgatctaactcattaacatctagatctttcttaaaagtttct 51812664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 39515927 - 39515995
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||||||| ||||| |||||||  | |||||||||||||| ||||| | ||||||||||||||||    
T  39515927 cataatgttctaccataatccatattttgatccaactcattaatttctaggtttttcttaatagtttct 39515995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 5338946 - 5338879
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttct 153  Q
    ||||||||  ||||||||||||| ||||| || ||| || |||||||||||||||||||||| |||||    
T  5338946 caaattacgccataatgttctataataaatcacatttcgatccaactcattaatctctagatctttct 5338879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 6084208 - 6084150
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctcta 144  Q
    ||||||||  |||| |||||||||||||||||||||  | |||||||||||||||||||    
T  6084208 caaattacgccatattgttctatcataaaccatattttgatccaactcattaatctcta 6084150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 95 - 194
Target Start/End: Original strand, 8342939 - 8343034
Alignment:
Q  95 tcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctct 194  Q
    ||||||||||| |||| | || ||||| |  |||||||||||||||||||||| ||| ||||    || |||||||||||||||||| |||||| |||||    
T  8342939 tcataatgttccatcaaatactatatttctatccaactcattaatctctagatctttattaa----ttgtttctcttatagtttttctaggtcttcctct 8343034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 12135900 - 12135862
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  12135900 tccaactcattaatctctagatttttcttaatagtttct 12135862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 187
Target Start/End: Complemental strand, 29129006 - 29128919
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtc 187  Q
    ||||||||||||||||||||||||||  | |||||||  |||| ||||| || |||| |||||||    ||||||||||||||||| |||||    
T  29129006 cataatgttctatcataaaccatatttggatccaacttgttaacctctaaatctttcctaatagt----ttctcttatagtttttctaggtc 29128919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 8203223 - 8203281
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtct 188  Q
    |||||||||||||||||||||| ||| |||||||    |||||||||||||||||| ||||||    
T  8203223 tccaactcattaatctctagatcttttttaatag----tttctcttatagtttttctaggtct 8203281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 19969301 - 19969359
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtct 188  Q
    |||||||||||||||||||||| ||| |||||||    |||||||||||||||||| ||||||    
T  19969301 tccaactcattaatctctagatctttgttaatag----tttctcttatagtttttctaggtct 19969359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 143
Target Start/End: Original strand, 25715375 - 25715432
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctct 143  Q
    ||||||||  |||||| ||||||||||||||||||| || | ||||||||||||||||    
T  25715375 caaattacgccataatattctatcataaaccatatttcggttcaactcattaatctct 25715432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 30834066 - 30834136
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcctct 200  Q
    |||||||||||||||||||||| |||| ||||||    |||||||||||| ||||| |||||| ||||| |||||    
T  30834066 tccaactcattaatctctagatctttcgtaatag----tttctcttatagcttttctaggtcttcctctccctct 30834136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 36339853 - 36339962
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||||||||||||| |||||| |||||| || |  |||||||||||||| || | || |||| ||||||    ||||||| |||||||||| |||    
T  36339853 caaattacttcataatgttttatcattaaccatgtttctgtccaactcattaatttc-aaatctttcctaatag----tttctctgatagtttttctagg 36339947  T
Q  186 tctacctctgcctct 200  Q
    ||| ||||| |||||    
T  36339948 tcttcctctacctct 36339962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 142
Target Start/End: Original strand, 39776959 - 39777000
Alignment:
Q  101 tgttctatcataaaccatattacgttccaactcattaatctc 142  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  39776959 tgttctatcataaaccatatttcgatccaactcattaatctc 39777000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 187
Target Start/End: Original strand, 7762486 - 7762583
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  ||||||||||||| ||||||||||||  | |||||||||||||  |||| || |||  ||||||    |||||||||||||||||| |||    
T  7762486 caaattacaccataatgttctattataaaccatatttagatccaactcattaacatctaaatcttttctaatag----tttctcttatagtttttctagg 7762581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 142
Target Start/End: Original strand, 28511850 - 28511906
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctc 142  Q
    ||||||||  ||||||||||||||||||||||| ||  | |||||||||||||||||    
T  28511850 caaattacgccataatgttctatcataaaccatgttttggtccaactcattaatctc 28511906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 52900701 - 52900749
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctcta 144  Q
    |||| ||||||||||||||||||||| |  |||||||||||||||||||    
T  52900701 catagtgttctatcataaaccatatttcagtccaactcattaatctcta 52900749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 27072536 - 27072607
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaat 157  Q
    ||||||||  |||||||||||||||||||||||||| |  |||||||| ||||| |||| || |||| ||||    
T  27072536 caaattacgccataatgttctatcataaaccatatttctgtccaactctttaatttctaaatctttcctaat 27072607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 40920588 - 40920639
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagat 147  Q
    |||||| |||||||||| |||||||| |  ||||||||||||||||||||||    
T  40920588 cataatattctatcatataccatatttctatccaactcattaatctctagat 40920639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 162
Target Start/End: Complemental strand, 50636305 - 50636238
Alignment:
Q  95 tcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    |||||||| ||||||||| ||||||||    ||||||||| |||||||||||| | ||||||||||||    
T  50636305 tcataatgctctatcatataccatatttttatccaactcaataatctctagatttatcttaatagttt 50636238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 5338885 - 5338847
Alignment:
Q  162 tctttctcttatagtttttccaggtctacctctgcctct 200  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  5338885 tctttctcttatagtttttctaggtctacttctgcctct 5338847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 8676942 - 8676992
Alignment:
Q  114 accatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||| || ||||||||||||||||||| || ||| ||||||||||||    
T  8676942 accatatttcggtccaactcattaatctctaaatcttttttaatagtttct 8676992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 12930360 - 12930438
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||| ||||||| |||||||||||| ||||||  | ||||||||| |||||| || || |||| ||||| |||||    
T  12930360 caaattacgtcataatcttctatcataaatcatatttggatccaactcactaatctttaaatttttcataataatttct 12930438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 17233830 - 17233896
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    ||||||| ||||||||| |||||||| |  ||||||||| ||||| || ||| ||||||||||||||    
T  17233830 cataatgctctatcatataccatattcctatccaactcaataatcgctggatctttcttaatagttt 17233896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 28528548 - 28528510
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  28528548 tccaactcattaatctctagatccttcttaatagtttct 28528510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 34444589 - 34444531
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctcta 144  Q
    ||||||||  ||||||||| ||| ||||||||||||  | |||||||||||||||||||    
T  34444589 caaattacaccataatgttttattataaaccatatttggatccaactcattaatctcta 34444531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 39140748 - 39140670
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  ||||||||||||||  ||||||||||  | ||||||| ||||| ||||| || |||| |||||||||||    
T  39140748 caaattacgccataatgttctatctgaaaccatatttggatccaactaattaacctctaaatttttcctaatagtttct 39140670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 1661639 - 1661574
Alignment:
Q  99 aatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||||||| |||||| ||| || |||||||| ||||| |||| || |||| |||||||||||    
T  1661639 aatgttctatcacaaaccacatttcggtccaactcgttaatttctaaatctttcctaatagtttct 1661574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 155
Target Start/End: Original strand, 31274450 - 31274519
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttctta 155  Q
    ||||||||  ||||| ||| |||||||||||||||| |  || ||||||| ||||||||||| |||||||    
T  31274450 caaattacgccataacgttatatcataaaccatatttcaatctaactcataaatctctagatctttctta 31274519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 32404575 - 32404685
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  ||| ||||| ||||||||||||| ||  | |  |||||||||||||||| || |||| ||||||    |||||||||||||||||  |||    
T  32404575 caaattacgccattatgttatatcataaaccatgtttggatttaactcattaatctctaaatctttcctaatag----tttctcttatagtttttgtagg 32404670  T
Q  186 tctacctctgcctct 200  Q
    ||| ||||| |||||    
T  32404671 tcttcctctacctct 32404685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 2544816 - 2544776
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcatt 136  Q
    ||||||||||||| |||||||||||| || |||||||||||    
T  2544816 cataatgttctattataaaccatatttcgctccaactcatt 2544776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 10584986 - 10585022
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagttt 162  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  10584986 tccaactcattaatctctggatctttcttaatagttt 10585022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 11941639 - 11941687
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctcta 144  Q
    ||||||||| |||||||||||||| | || ||||||||| |||||||||    
T  11941639 cataatgttttatcataaaccatactccgatccaactcaataatctcta 11941687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 14557791 - 14557743
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctcta 144  Q
    |||||||||||||||||||| | ||| || |||||||||||||| ||||    
T  14557791 cataatgttctatcataaactacatttcggtccaactcattaatttcta 14557743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 8e-20; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 9235270 - 9235172
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||| || |||||||||||||||| |      ||||||||| |||||| ||||||    
T  9235270 cataatgttctatcataaaccatatttcgatccagctcattaatctctatatctttcttaatagtttctct------tagtttttctaggtcttcctctg 9235177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 201
Target Start/End: Complemental strand, 30588671 - 30588569
Alignment:
Q  95 tcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctct 194  Q
    |||||||||||||| |||||||||||| || ||||||||||| |||||||||| |||||||| |     |||||||||||||||||| |||||| ||| |    
T  30588671 tcataatgttctattataaaccatatttcgatccaactcattcatctctagatctttcttaaca----atttctcttatagtttttctaggtcttcctat 30588576  T
Q  195 gcctctc 201  Q
    | |||||    
T  30588575 gtctctc 30588569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 96 - 200
Target Start/End: Original strand, 12576919 - 12577019
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    ||||||| ||||||||| |||||||| |  | |||||||||||||||||||| |||||||||||    ||| |||| ||||||||| |||||| ||||||    
T  12576919 cataatggtctatcatataccatatttctattcaactcattaatctctagatctttcttaatag----tttatcttgtagtttttctaggtcttcctctg 12577014  T
Q  196 cctct 200  Q
    |||||    
T  12577015 cctct 12577019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 7359310 - 7359387
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||| |||||||||| |||| ||||||||||| || ||||||| |||||||||||||| ||||| ||||||||||    
T  7359310 caaattacgtcataatgtt-tatcgtaaaccatatttcgatccaacttattaatctctagatttttctaaatagtttct 7359387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 14668004 - 14667926
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  |||||||||||||||||||||||| |  | |||||||||||||||||||||| ||||||| ||| ||||    
T  14668004 caaattacaccataatgttctatcataaaccatacttggatccaactcattaatctctagatctttcttagtagcttct 14667926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 43475472 - 43475394
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  ||||| |||||| |||||| |||||| || |||||||||||||||||| ||| ||||||||||||||||    
T  43475472 caaattacaccataacgttctaccataaatcatatttcgatccaactcattaatctctggatctttcttaatagtttct 43475394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 14749530 - 14749432
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    |||| |||||||||| |||||||||| |  |||||||| |||||||||||||  ||||| ||||    |||||||||||||||||| |||||| ||||||    
T  14749530 catagtgttctatcaaaaaccatatttctatccaactcgttaatctctagatccttcttgatag----tttctcttatagtttttctaggtcttcctctg 14749435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 11675753 - 11675656
Alignment:
Q  96 cataatgttctatcataaaccata-ttacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctct 194  Q
    |||||||||||||||||||||||| |||   ||||||||||||||||||| || | || ||||||    ||||||||||||||||| ||||||| |||||    
T  11675753 cataatgttctatcataaaccatatttaaaatccaactcattaatctctaaatctgtcctaatag----tttctcttatagtttttacaggtcttcctct 11675658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 6889225 - 6889117
Alignment:
Q  87 aaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggt 186  Q
    |||||||  ||||||||||||||||||||||||||  |  |||||| ||||||||||| || |||| |||||||    ||||||||||||||||| |||     
T  6889225 aaattacgccataatgttctatcataaaccatattttggcccaactaattaatctctaaatctttcctaatagt----ttctcttatagtttttctaggc 6889130  T
Q  187 ctacctctgcctc 199  Q
    || ||||| ||||    
T  6889129 cttcctcttcctc 6889117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 7678710 - 7678633
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||| ||| |||||||||| ||| ||||||| |||| || |||||||||||||||||||||| ||||| ||||||||||    
T  7678710 caaactacctcataatgtt-tattataaaccgtatttcgatccaactcattaatctctagatctttctaaatagtttct 7678633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 20367126 - 20367065
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagat 147  Q
    |||||||| |||||||||| | ||||||||||||||  | ||||||||||||||||||||||    
T  20367126 caaattacgtcataatgttatgtcataaaccatatttggatccaactcattaatctctagat 20367065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 418083 - 418158
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtt 161  Q
    ||||||||  |||||||||||||||||||||| |||  | ||||||||||||||||||| || |||| ||| ||||    
T  418083 caaattacgccataatgttctatcataaaccacatttggatccaactcattaatctctaaatctttcctaaaagtt 418158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 43557891 - 43557938
Alignment:
Q  95 tcataatgttctatcataaaccatattacgttccaactcattaatctc 142  Q
    ||||||||||||||||||||||||||| || ||||||||| |||||||    
T  43557891 tcataatgttctatcataaaccatatttcgatccaactcaataatctc 43557938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 23980168 - 23980099
Alignment:
Q  95 tcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||| |||||||||||||||||||||  | |||||||||||||||| || ||  |||| ||||||||||    
T  23980168 tcatattgttctatcataaaccatatttagatccaactcattaatctataaatcattctcaatagtttct 23980099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 35615507 - 35615438
Alignment:
Q  95 tcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||||||| |||||    ||||||||||||||||||| || ||| | ||||||||||    
T  35615507 tcataatgttctatcataaactatatttttatccaactcattaatctctaaatttttatgaatagtttct 35615438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 17340496 - 17340560
Alignment:
Q  97 ataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtt 161  Q
    |||||||| ||||||||||||||||  | || |||||||||| ||||| || |||||||||||||    
T  17340496 ataatgttatatcataaaccatatttggatcaaactcattaacctctaaatctttcttaatagtt 17340560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 38684703 - 38684635
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||||||||||   |||||||| |  ||||||| |||||||||||||| |||||||| |||||||    
T  38684703 cataatgttctatcaagtaccatatttctatccaactaattaatctctagatctttcttaaaagtttct 38684635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 43035204 - 43035136
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||| |||||||| || |||||||||| ||| || | || |||| |||||||||||    
T  43035204 cataatgttctatcatacaccatatttcggtccaactcataaatttccaaatttttcctaatagtttct 43035136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 6859604 - 6859504
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    ||||||||||||||||||||||||||  |  |||| | | |||||| || || |||| ||||||    |||||||||||||||||| |||||| |||||     
T  6859604 cataatgttctatcataaaccatattttggcccaagtaactaatctgtaaatctttcctaatag----tttctcttatagtttttctaggtcttcctctt 6859509  T
Q  196 cctct 200  Q
    |||||    
T  6859508 cctct 6859504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 29922517 - 29922413
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  |||||||||||||| |||||||  || |  |||||||  |||||||||| || ||||||||||||    ||||||||||||||||| ||     
T  29922517 caaattacgccataatgttctatcgtaaaccaggtttcagtccaacttgttaatctctaaatctttcttaatagt----ttctcttatagtttttctaga 29922422  T
Q  186 tctacctct 194  Q
    ||| |||||    
T  29922421 tcttcctct 29922413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 38341479 - 38341552
Alignment:
Q  87 aaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||| ||||||||||||||||||||||||| | || |||||   ||||||||||| ||  |||||||||||||||    
T  38341479 aaattacgtcataatgttctatcataaaccatacttcgatccaa---attaatctctatat-cttcttaatagtttct 38341552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 121
Target Start/End: Original strand, 42504296 - 42504331
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatatt 121  Q
    |||||||| |||||||||||||||||||||||||||    
T  42504296 caaattacgtcataatgttctatcataaaccatatt 42504331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 141
Target Start/End: Original strand, 15252802 - 15252848
Alignment:
Q  95 tcataatgttctatcataaaccatattacgttccaactcattaatct 141  Q
    |||||||||||||||||||||| |||| || |||||||| |||||||    
T  15252802 tcataatgttctatcataaaccctatttcgatccaactcgttaatct 15252848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 27998665 - 27998570
Alignment:
Q  95 tcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctct 194  Q
    ||||||| |||||||||| | ||| || |  || ||||||||||||| ||||| ||||||| |||    |||||||||||||||||| |||||| |||||    
T  27998665 tcataatattctatcatatatcatgttcctatctaactcattaatctgtagatctttcttagtag----tttctcttatagtttttctaggtcttcctct 27998570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 28186864 - 28186902
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  28186864 tccaactcattaatctctaaatctttcttaatagtttct 28186902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 2713137 - 2713079
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtct 188  Q
    ||||||||||| ||||||||||  |||||||||||    ||||||||||||||||| ||||||    
T  2713137 tccaactcattcatctctagatccttcttaatagt----ttctcttatagtttttctaggtct 2713079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 18698987 - 18698917
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcctct 200  Q
    ||||||||| |||||||||||| |||||| |||    | ||||||||||||||||| |||| | |||||||||||    
T  18698987 tccaactcactaatctctagatctttcttgata----cattctcttatagtttttctaggtattcctctgcctct 18698917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 28005725 - 28005692
Alignment:
Q  129 aactcattaatctctagatatttcttaatagttt 162  Q
    ||||||||||||||||||| ||||||||||||||    
T  28005725 aactcattaatctctagatctttcttaatagttt 28005692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 39322138 - 39322191
Alignment:
Q  109 cataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    ||||||| ||||| |  |||||||||||||||| ||||| ||||||||||||||    
T  39322138 cataaactatatttctatccaactcattaatctttagatctttcttaatagttt 39322191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 193
Target Start/End: Complemental strand, 28105 - 28012
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctc 193  Q
    |||| |||||||||| ||| ||||||  | ||||||| ||||| ||||| || |||| |||||||    ||||||||||||||||| |||||| ||||    
T  28105 catagtgttctatcagaaatcatatttggatccaacttattaacctctaaatctttcctaatagt----ttctcttatagtttttctaggtcttcctc 28012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 2066190 - 2066150
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttcttt 166  Q
    |||||||||||||||||||||| ||| ||| ||||||||||    
T  2066190 tccaactcattaatctctagatcttttttagtagtttcttt 2066150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 4460400 - 4460360
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttcttt 166  Q
    |||||||||||||||||||| | |||||||||||| |||||    
T  4460400 tccaactcattaatctctaggtctttcttaatagtctcttt 4460360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 15369886 - 15369947
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacc 191  Q
    ||||||||||| |||| ||||| |||||||||||    ||||||||||| |||||| |||||||||    
T  15369886 tccaactcatttatctttagatttttcttaatag----tttctcttatactttttctaggtctacc 15369947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 3e-19; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 86 - 162
Target Start/End: Complemental strand, 36304199 - 36304123
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    ||||||||  |||||||| |||||||||||||||||  | |||||||||||||||||||||| ||||||||||||||    
T  36304199 caaattacgccataatgtcctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagttt 36304123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 19758110 - 19758044
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    ||||||||||||||||||||||||||  | ||||||||||||||||||| ||||||| |||||||||    
T  19758110 cataatgttctatcataaaccatattgagatccaactcattaatctctaaatatttcctaatagttt 19758044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 39600730 - 39600840
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  |||||||||||||| ||||||| |||  | ||||||||||||| ||||| || |||||||||||    |||||||||||||||||| |||    
T  39600730 caaattacaccataatgttctatcgtaaaccagatttggatccaactcattaacctctaaatctttcttaatag----tttctcttatagtttttctagg 39600825  T
Q  186 tctacctctgcctct 200  Q
    ||| ||||| |||||    
T  39600826 tcttcctctacctct 39600840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 188
Target Start/End: Original strand, 40116530 - 40116615
Alignment:
Q  99 aatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtct 188  Q
    ||||||||||||||||||||||| || ||||||||||||||||||| || | || ||||||    |||||||||||||||||| ||||||    
T  40116530 aatgttctatcataaaccatatttcggtccaactcattaatctctaaatctatcctaatag----tttctcttatagtttttctaggtct 40116615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 49841839 - 49841771
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||| |||||||| || |||||||||||||||| ||||| ||| ||||||||||||    
T  49841839 cataatgttctatcatataccatatttcgatccaactcattaatctttagatctttgttaatagtttct 49841771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 86 - 165
Target Start/End: Complemental strand, 29475919 - 29475840
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctt 165  Q
    ||||||||  |||| | ||||||||||||| ||||| |  |||||||||||||||||||||| |||||||||||||||||    
T  29475919 caaattacgccatagttttctatcataaacaatatttcaatccaactcattaatctctagatctttcttaatagtttctt 29475840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 45289151 - 45289218
Alignment:
Q  97 ataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    |||||||||||||||||||||||||  | ||||||||||||||||||| || |||| |||||||||||    
T  45289151 ataatgttctatcataaaccatatttggatccaactcattaatctctaaatctttcctaatagtttct 45289218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 19737207 - 19737141
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    ||||||||| ||||||||||||||||  | ||||||||||||||||||| ||||||| |||||||||    
T  19737207 cataatgttttatcataaaccatattgagatccaactcattaatctctaaatatttcctaatagttt 19737141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 23534619 - 23534697
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  ||||||||||||||||||| ||||||||  |||||||||||||||||||  | |||| |||||||||||    
T  23534619 caaattacgccataatgttctatcataaatcatattacagtccaactcattaatctctaagtctttcctaatagtttct 23534697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 40116387 - 40116445
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctcta 144  Q
    ||||||||  |||||||||||||||||||||||||| || |||||||||||||||||||    
T  40116387 caaattacgccataatgttctatcataaaccatatttcggtccaactcattaatctcta 40116445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 201
Target Start/End: Original strand, 54365024 - 54365135
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    |||||||| ||||| |||||||||||||||||||||  | || ||| |||||||||| |  | |||| ||||||    |||||||||||||||||| |||    
T  54365024 caaattacgtcatagtgttctatcataaaccatattttggtctaacacattaatctccaagtctttcctaatag----tttctcttatagtttttctagg 54365119  T
Q  186 tctacctctgcctctc 201  Q
    ||| ||||||||||||    
T  54365120 tcttcctctgcctctc 54365135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 29601125 - 29601052
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatag 159  Q
    |||||||| ||||||||||||||||||||| |||||    ||||||||||||||||||| || |||||||||||    
T  29601125 caaattacatcataatgttctatcataaactatatttgaatccaactcattaatctctaaatctttcttaatag 29601052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 55244501 - 55244441
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaa 156  Q
    ||||||||||||||||| |||||||| |  |||||||||||||||||||||| ||||||||    
T  55244501 cataatgttctatcatataccatatttctatccaactcattaatctctagatttttcttaa 55244441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 37598229 - 37598297
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||| | ||||   |  |||||||||||||||||||||||| ||||||||||||||    
T  37598229 cataatgttctatcatatatcatacccctatccaactcattaatctctagatatatcttaatagtttct 37598297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 40991664 - 40991609
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatct 141  Q
    ||||||||  ||||||||||||||||||||||||||  | ||||||||||||||||    
T  40991664 caaattacaccataatgttctatcataaaccatattttggtccaactcattaatct 40991609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 44571643 - 44571584
Alignment:
Q  103 ttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    |||||||||||||||||||  | ||||||||||||||||||| ||||||| | |||||||    
T  44571643 ttctatcataaaccatatttggatccaactcattaatctctaaatatttccttatagttt 44571584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 36820067 - 36820122
Alignment:
Q  127 ccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggt 186  Q
    ||||||||||||||||||||| |||||||||||    |||||||||||||||||| ||||    
T  36820067 ccaactcattaatctctagatctttcttaatag----tttctcttatagtttttctaggt 36820122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 54128602 - 54128501
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    ||||||||||||||||||||||||||  | ||||||||||| | ||||| || |||| | ||||||||| |   | |||||||||| |||||| |||||     
T  54128602 cataatgttctatcataaaccatatttgggtccaactcattgacctctaaatctttccttatagtttctct---taatagtttttctaggtcttcctcta 54128506  T
Q  196 cctct 200  Q
    |||||    
T  54128505 cctct 54128501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 40106669 - 40106721
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaa 138  Q
    |||||||  |||||||||||||||||||||||||||  | |||||||||||||    
T  40106669 caaattatgtcataatgttctatcataaaccatatttggatccaactcattaa 40106721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 41452829 - 41452865
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagttt 162  Q
    |||||||||||||||||||||| ||||||||||||||    
T  41452829 tccaactcattaatctctagatctttcttaatagttt 41452865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 162
Target Start/End: Original strand, 41842572 - 41842648
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    ||||||||  ||||||||||||||| |||||||||| |  || |||||||||| |||||||| | |||| |||||||    
T  41842572 caaattacaccataatgttctatcaaaaaccatatttcaatctaactcattaacctctagatctatctttatagttt 41842648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 164
Target Start/End: Complemental strand, 43308781 - 43308717
Alignment:
Q  100 atgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||| | |||||  |  ||||||| |||||||||||||| ||||||||||||||||    
T  43308781 atgttctatcatatatcatatctctatccaactgattaatctctagatttttcttaatagtttct 43308717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 188
Target Start/End: Original strand, 45486908 - 45486999
Alignment:
Q  96 cataatgttctatcataaaccatatta---cgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtct 188  Q
    |||||||||||||||||||||||||||    ||||||| ||||||||||| |  | |||| ||||||    |||||||||||||||||| ||||||    
T  45486908 cataatgttctatcataaaccatattatttggttccaagtcattaatctcaaagtctttcataatag----tttctcttatagtttttctaggtct 45486999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 164
Target Start/End: Complemental strand, 33700373 - 33700338
Alignment:
Q  129 aactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||||||||||||||||| ||||    
T  33700373 aactcattaatctctagatatttcttaatagcttct 33700338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 121
Target Start/End: Complemental strand, 39208841 - 39208806
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatatt 121  Q
    |||||||| |||||||||||||||||||||||||||    
T  39208841 caaattacgtcataatgttctatcataaaccatatt 39208806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 200
Target Start/End: Original strand, 45493751 - 45493851
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctg 195  Q
    ||||||| ||||||||| ||||| || |  |||| |||||||| |||| ||| |||||||||||||||||    ||||||||| || |||| | ||||||    
T  45493751 cataatgctctatcatataccatgtttctatccagctcattaacctctggatctttcttaatagtttctt----ttatagtttatctaggtatccctctg 45493846  T
Q  196 cctct 200  Q
    |||||    
T  45493847 cctct 45493851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 48657398 - 48657453
Alignment:
Q  107 atcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    ||||||||| ||||| || | |||||||||||||| ||||| ||||||||||||||    
T  48657398 atcataaactatatttcgatacaactcattaatctatagatttttcttaatagttt 48657453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 49042170 - 49042091
Alignment:
Q  86 caaattacttcataatgttctatcataaa-ccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  |||| |||||||||||||| |||||||  | ||||||||||||| ||||| || |||| |||||||||||    
T  49042170 caaattacgccatagtgttctatcataaaaccatatttggatccaactcattaacctctaaatctttcctaatagtttct 49042091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 121
Target Start/End: Complemental strand, 51027791 - 51027756
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatatt 121  Q
    |||||||| |||||||||||||||||||||||||||    
T  51027791 caaattacgtcataatgttctatcataaaccatatt 51027756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 164
Target Start/End: Original strand, 2340810 - 2340844
Alignment:
Q  130 actcattaatctctagatatttcttaatagtttct 164  Q
    |||||||||||||||||| ||||||||||||||||    
T  2340810 actcattaatctctagatctttcttaatagtttct 2340844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 33755393 - 33755501
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    |||||||| |||||||||||  |||  ||||||||   | |||||||||||||||||||  | |||| ||||||||||    |||||||||||||| |||    
T  33755393 caaattacgtcataatgttcactca--aaccatatcttggtccaactcattaatctctaagtttttcctaatagtttc----tcttatagtttttctagg 33755486  T
Q  186 tctacctctgcctct 200  Q
    | | |||||||||||    
T  33755487 ttttcctctgcctct 33755501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 38431069 - 38431023
Alignment:
Q  98 taatgttctatcataaaccatattacgttccaactcattaatctcta 144  Q
    ||||||||||||||||||||||||  | ||||||||||||| |||||    
T  38431069 taatgttctatcataaaccatatttggatccaactcattaacctcta 38431023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 39235361 - 39235295
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    |||||||||||||| |||||||||||  | |||||||||||||  |||| || |||| |||||||||    
T  39235361 cataatgttctatcgtaaaccatatttagatccaactcattaacttctaaatctttcctaatagttt 39235295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 46431768 - 46431819
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttc 181  Q
    |||||||||||||||||||||| ||| |||||||||||    ||||||||||||||    
T  46431768 tccaactcattaatctctagatcttttttaatagtttc----tcttatagtttttc 46431819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 50960686 - 50960764
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  ||||||| ||||| ||| ||||||||  | ||||||||||||||||||| |  |||| |||||||||||    
T  50960686 caaattacaccataatggtctatgatacaccatatttggatccaactcattaatctctaaacctttcctaatagtttct 50960764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 119
Target Start/End: Complemental strand, 2195306 - 2195273
Alignment:
Q  86 caaattacttcataatgttctatcataaaccata 119  Q
    |||||||| |||||||||||||||||||||||||    
T  2195306 caaattacatcataatgttctatcataaaccata 2195273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 37534264 - 37534329
Alignment:
Q  99 aatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||| ||||||||| ||||| |  || || ||||||||||| |||| ||||||||||||||||    
T  37534264 aatgttcaatcataaactatatttcaatcaaattcattaatctcaagatctttcttaatagtttct 37534329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 37779101 - 37779052
Alignment:
Q  95 tcataatgttctatcataaaccatattacgttccaactcattaatctcta 144  Q
    |||||||||||||||||||||||||||  | || | ||||||||||||||    
T  37779101 tcataatgttctatcataaaccatattcggatctagctcattaatctcta 37779052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 41482186 - 41482298
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctaga-tatttcttaatagtttctttctcttatagtttttccag 184  Q
    ||||||||  |||||||||||||||||||||| |||  | | ||||||||||||||| | | | |||| ||||||||||| |   | | |||||||| ||    
T  41482186 caaattacgccataatgttctatcataaaccagattttggttcaactcattaatctccaaagtctttcctaatagtttctct---taaaagtttttctag 41482282  T
Q  185 gtctacctctgcctct 200  Q
    |||| |||||||||||    
T  41482283 gtcttcctctgcctct 41482298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 42510065 - 42510175
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  |||||||||| |||||||||||||||  | ||||||||||| || || | || |||| |||| |    ||||||| |||||||||| |||    
T  42510065 caaattacgccataatgttcaatcataaaccatattttggtccaactcatttatttccaaatctttcctaatgg----tttctctgatagtttttctagg 42510160  T
Q  186 tctacctctgcctct 200  Q
    ||| ||| |||||||    
T  42510161 tcttcctttgcctct 42510175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 19676140 - 19676208
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||| ||||||||| | ||||||  | ||||||||||||| ||||| || |||| |||||||||||    
T  19676140 cataatgctctatcatacagcatatttggatccaactcattaacctctaaatttttcctaatagtttct 19676208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 31261065 - 31261101
Alignment:
Q  164 tttctcttatagtttttccaggtctacctctgcctct 200  Q
    |||||||||||||||||| |||||| |||||||||||    
T  31261065 tttctcttatagtttttctaggtcttcctctgcctct 31261101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 32170638 - 32170578
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctaga 146  Q
    |||||||  |||||||||| ||||||| |||||||| |  ||||||| |||||||||||||    
T  32170638 caaattatgtcataatgttatatcatagaccatatttctatccaacttattaatctctaga 32170578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 42026595 - 42026663
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||||||||||| |||||||| |  || |||||||||||| ||| ||   ||||||||||||||    
T  42026595 cataatgttctatcatataccatatttctatctaactcattaatccctatatcaatcttaatagtttct 42026663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 50237695 - 50237759
Alignment:
Q  98 taatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagttt 162  Q
    ||||||||||||||| || ||||| |  ||||||||| ||||||||  || ||||||||||||||    
T  50237695 taatgttctatcatatacaatatttctatccaactcaataatctctgaatctttcttaatagttt 50237759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 66771 - 66660
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgt-tccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccag 184  Q
    ||||||||  |||||||||||||||||| ||||||| | | || ||||||||||||||||||| |||||||||| ||| ||    ||||| |||||| ||    
T  66771 caaattacgccataatgttctatcataagccatatttcctatctaactcattaatctctagatctttcttaataatttttt----ttataatttttctag 66676  T
Q  185 gtctacctctgcctct 200  Q
    |||| |||||||||||    
T  66675 gtcttcctctgcctct 66660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 160373 - 160451
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttct 164  Q
    ||||||||  |||||||||||||||||||||||||| || || ||||||||||| |||  || |||| |||||||||||    
T  160373 caaattacgccataatgttctatcataaaccatatttcggtcgaactcattaatttcttaatctttcctaatagtttct 160451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 3889 - 3986
Alignment:
Q  98 taatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtctacctctgcc 197  Q
    |||||||| |||||||||||||||    ||||||||||||||||   ||| ||||| |||||    |||||||||||||||||  |||||||||||||||    
T  3889 taatgttcaatcataaaccatattttaatccaactcattaatctaatgatttttctaaatag----tttctcttatagttttt-taggtctacctctgcc 3983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 58275 - 58385
Alignment:
Q  86 caaattacttcataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccagg 185  Q
    ||||||||  |||||||||||||||||||||||||   | ||||||||||| ||||| |  | |||| ||| ||    |||||||||| ||||||| |||    
T  58275 caaattacgacataatgttctatcataaaccatatcttggtccaactcattgatctccaagtttttcctaacag----tttctcttatcgtttttctagg 58370  T
Q  186 tctacctctgcctct 200  Q
    ||| |||||||||||    
T  58371 tcttcctctgcctct 58385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 178509 - 178567
Alignment:
Q  126 tccaactcattaatctctagatatttcttaatagtttctttctcttatagtttttccaggtct 188  Q
    ||||||||||||||||||| || |||||||||||    |||||||||||||||||| ||||||    
T  178509 tccaactcattaatctctatatctttcttaatag----tttctcttatagtttttctaggtct 178567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 2360 - 2424
Alignment:
Q  96 cataatgttctatcataaaccatattacgttccaactcattaatctctagatatttcttaatagt 160  Q
    ||||||||||||| ||| | |||||| |  || ||||||||||||||||||| ||||||||||||    
T  2360 cataatgttctattatataacatatttctatcaaactcattaatctctagatctttcttaatagt 2424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1858 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1858
Description:

Target: scaffold1858; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 920 - 976
Alignment:
Q  82 tgaacaaattacttcataatgttctatcataaaccatattacgttccaactcattaa 138  Q
    |||||||||||   ||||||||| ||| |||||||||||| || |||||||||||||    
T  920 tgaacaaattatgccataatgttttattataaaccatatttcggtccaactcattaa 976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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