View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11380_low_2 (Length: 499)

Name: NF11380_low_2
Description: NF11380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11380_low_2
NF11380_low_2
[»] chr6 (5 HSPs)
chr6 (61-326)||(13179564-13179833)
chr6 (21-62)||(2181564-2181605)
chr6 (22-66)||(21226720-21226764)
chr6 (17-64)||(229547-229594)
chr6 (21-62)||(19376064-19376105)
[»] chr3 (7 HSPs)
chr3 (244-418)||(49092423-49092594)
chr3 (399-472)||(1424060-1424136)
chr3 (19-61)||(18463974-18464016)
chr3 (21-66)||(1421425-1421470)
chr3 (21-62)||(51102328-51102369)
chr3 (17-61)||(12013510-12013554)
chr3 (21-61)||(35359659-35359699)
[»] chr4 (9 HSPs)
chr4 (224-384)||(17393634-17393791)
chr4 (21-63)||(23981368-23981410)
chr4 (21-62)||(32595883-32595925)
chr4 (21-63)||(46523243-46523285)
chr4 (21-62)||(9884953-9884994)
chr4 (21-62)||(24560509-24560550)
chr4 (21-61)||(30966866-30966907)
chr4 (21-61)||(12144797-12144837)
chr4 (21-61)||(51902127-51902167)
[»] scaffold2072 (1 HSPs)
scaffold2072 (218-337)||(2-121)
[»] chr5 (5 HSPs)
chr5 (68-139)||(32409642-32409713)
chr5 (65-139)||(32373606-32373680)
chr5 (21-69)||(18254385-18254434)
chr5 (19-60)||(28519642-28519683)
chr5 (21-61)||(38861095-38861135)
[»] scaffold0334 (1 HSPs)
scaffold0334 (21-66)||(4066-4111)
[»] chr8 (2 HSPs)
chr8 (21-64)||(39302133-39302176)
chr8 (22-66)||(5422736-5422780)
[»] chr1 (2 HSPs)
chr1 (21-67)||(15710812-15710858)
chr1 (21-61)||(25170955-25170995)
[»] chr7 (2 HSPs)
chr7 (21-66)||(35097781-35097826)
chr7 (21-61)||(18656295-18656335)
[»] chr2 (2 HSPs)
chr2 (21-61)||(30728696-30728736)
chr2 (21-61)||(43015218-43015258)


Alignment Details
Target: chr6 (Bit Score: 162; Significance: 3e-86; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 61 - 326
Target Start/End: Original strand, 13179564 - 13179833
Alignment:
Q  61 ttaattataagtgttcacgtgaaattgatgtagctcactaaaaatgacatcgttgcagatgacacaaaacaatgttggaacttgtgagttggttgttacg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  13179564 ttaattataagtgttcacgtgaaattgatgtagctcactaaaaatgacattgttgcagatgacacaaaacaatgttggaacttgtgagttggttgttaca 13179663  T
Q  161 atagtttattgaagtgttattcnnnnnnnnnnnnnncttcaaaattaatatttccgttg--------ttgcatttagaggacaaaaagatatctagatgc 252  Q
    ||||||||||||||||||||||              |||   |||||||||||||||||        ||||||||||||||||||||||||||||  |||    
T  13179664 atagtttattgaagtgttattc----ttttttttttcttttgaattaatatttccgttgatatatgtttgcatttagaggacaaaaagatatctaactgc 13179759  T
Q  253 aattgaggaattattatattgactttagttcttctagttgagtcacattaaatcttgaacttgattagttatat 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  13179760 aattgaggaattattatattgactttagttcttctagttgagtcacattaaatcttgaagttgattagatatat 13179833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 2181564 - 2181605
Alignment:
Q  21 aaaaataacctatatgacaggggtaaatcaccattaaccctt 62  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
T  2181564 aaaaataacctatattacaggggtaaagcaccattaaccctt 2181605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 21226764 - 21226720
Alignment:
Q  22 aaaataacctatatgacaggggtaaatcaccattaacccttaatt 66  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||    
T  21226764 aaaatgacctatattacaggggtaaagcaccattaacccttaatt 21226720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 229594 - 229547
Alignment:
Q  17 acctaaaaataacctatatgacaggggtaaatcaccattaacccttaa 64  Q
    ||||||||||  ||||||| ||||||||||| ||||||||||||||||    
T  229594 acctaaaaattgcctatattacaggggtaaagcaccattaacccttaa 229547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 19376105 - 19376064
Alignment:
Q  21 aaaaataacctatatgacaggggtaaatcaccattaaccctt 62  Q
    |||||| |||||||| ||||||||||| ||||||||||||||    
T  19376105 aaaaatgacctatattacaggggtaaagcaccattaaccctt 19376064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 3e-52; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 244 - 418
Target Start/End: Complemental strand, 49092594 - 49092423
Alignment:
Q  244 tctagatgcaattgaggaattattatattgactttagttcttctagttgagtcacattaaatcttgaacttgattagttatatgtatcaccttccaaatt 343  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| ||||| | ||||||||||| | ||||||||||||||| ||||||||| |||||    
T  49092594 tctagttgcaattgaggaattattatattgactctagttcttctagctgagttatattaaatcttggagttgattagttatatgaatcaccttctaaatt 49092495  T
Q  344 gtggtgtcaatatttaggattctaggtagtggcactttcccgtttaattgtttggagtcaaaatattatatatga 418  Q
    ||| ||||||   ||||||| ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  49092494 gtgttgtcaa---ttaggatcctaggtagtggcactttccagtttggttgtttggagtcaaaatattatatatga 49092423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 399 - 472
Target Start/End: Complemental strand, 1424136 - 1424060
Alignment:
Q  399 agtcaaaatattatatatgactagtatcatc---attgatattttatattgtatgatcctacgcatgatggacttct 472  Q
    ||||||||||||||||||||||| ||| |||   | ||||||||||| ||||| ||||||| |||||||||||||||    
T  1424136 agtcaaaatattatatatgactaatatgatcggcactgatattttatgttgtaagatcctatgcatgatggacttct 1424060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 18463974 - 18464016
Alignment:
Q  19 ctaaaaataacctatatgacaggggtaaatcaccattaaccct 61  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||    
T  18463974 ctaaaaataacctatattacaggggtaaaacaccgttaaccct 18464016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 1421470 - 1421425
Alignment:
Q  21 aaaaataacctatatgacaggggtaaatcaccattaacccttaatt 66  Q
    |||||| || ||||| ||||||||||| ||||||||||||||||||    
T  1421470 aaaaatgacatatattacaggggtaaagcaccattaacccttaatt 1421425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 51102328 - 51102369
Alignment:
Q  21 aaaaataacctatatgacaggggtaaatcaccattaaccctt 62  Q
    |||||| |||||||| ||||||||||| ||||||||||||||    
T  51102328 aaaaatgacctatattacaggggtaaagcaccattaaccctt 51102369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 12013554 - 12013510
Alignment:
Q  17 acctaaaaataacctatatgacaggggtaaatcaccattaaccct 61  Q
    |||| ||||| |||||||| |||||||||||||||| ||||||||    
T  12013554 acctgaaaatgacctatattacaggggtaaatcacccttaaccct 12013510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 35359659 - 35359699
Alignment:
Q  21 aaaaataacctatatgacaggggtaaatcaccattaaccct 61  Q
    |||||| |||||||| ||||||||||| |||||||||||||    
T  35359659 aaaaatgacctatattacaggggtaaaacaccattaaccct 35359699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 224 - 384
Target Start/End: Complemental strand, 17393791 - 17393634
Alignment:
Q  224 atttagaggacaaaaagatatctagatgcaattgaggaattattatattgactttagttcttctagttgagtcacattaaatcttgaacttgattagtta 323  Q
    ||||||| |||||||||||||||||   ||||  ||||| ||||||||||||| |||||||||| | ||||| ||||||||||||||| || ||||||||    
T  17393791 atttagaagacaaaaagatatctagccacaataaaggaagtattatattgactctagttcttctggatgagttacattaaatcttgaagtttattagtta 17393692  T
Q  324 tatgtatcaccttccaaattgtggtgtcaatatttaggattctaggtagtggcactttccc 384  Q
    |||| ||| |||||| ||||||| ||||||   ||||||| ||||||||||||||||||||    
T  17393691 tatgaatcgccttccgaattgtgttgtcaa---ttaggatcctaggtagtggcactttccc 17393634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 23981368 - 23981410
Alignment:
Q  21 aaaaataacctatatgacaggggtaaatcaccattaaccctta 63  Q
    |||||| |||||||| ||||||||||| |||||||||||||||    
T  23981368 aaaaatgacctatattacaggggtaaagcaccattaaccctta 23981410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 32595883 - 32595925
Alignment:
Q  21 aaaaataacctatatgacagggg-taaatcaccattaaccctt 62  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  32595883 aaaaataacctatattacagggggtaaatcaccattaaccctt 32595925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 46523243 - 46523285
Alignment:
Q  21 aaaaataacctatatgacaggggtaaatcaccattaaccctta 63  Q
    ||||||||| ||||| ||||||||||| |||||||||||||||    
T  46523243 aaaaataacttatattacaggggtaaaacaccattaaccctta 46523285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 9884994 - 9884953
Alignment:
Q  21 aaaaataacctatatgacaggggtaaatcaccattaaccctt 62  Q
    |||||| |||||||| ||||||||||| ||||||||||||||    
T  9884994 aaaaatgacctatattacaggggtaaaacaccattaaccctt 9884953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 24560550 - 24560509
Alignment:
Q  21 aaaaataacctatatgacaggggtaaatcaccattaaccctt 62  Q
    ||||||||||||||| |||||| |||| ||||||||||||||    
T  24560550 aaaaataacctatattacagggataaaacaccattaaccctt 24560509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 30966866 - 30966907
Alignment:
Q  21 aaaaataacctatatgaca-ggggtaaatcaccattaaccct 61  Q
    ||||||||||||||| ||| ||||||||||||||||||||||    
T  30966866 aaaaataacctatattacaaggggtaaatcaccattaaccct 30966907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 12144797 - 12144837
Alignment:
Q  21 aaaaataacctatatgacaggggtaaatcaccattaaccct 61  Q
    |||||| |||||||| ||||||||||| |||||||||||||    
T  12144797 aaaaatgacctatattacaggggtaaagcaccattaaccct 12144837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 51902127 - 51902167
Alignment:
Q  21 aaaaataacctatatgacaggggtaaatcaccattaaccct 61  Q
    ||||||||| ||||| ||||||||||| |||||||||||||    
T  51902127 aaaaataacatatattacaggggtaaaacaccattaaccct 51902167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2072 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold2072
Description:

Target: scaffold2072; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 218 - 337
Target Start/End: Complemental strand, 121 - 2
Alignment:
Q  218 tgttgcatttagaggacaaaaagatatctagatgcaattgaggaattattatattgactttagttcttctagttgagtcacattaaatcttgaacttgat 317  Q
    |||| |||||| |||| | |||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||| | ||||||||||| | |||||    
T  121 tgttacatttaaaggaaagaaagatatctagttgcaattgaggaattattatattgactctagttcttctagctgagttatattaaatcttggagttgat 22  T
Q  318 tagttatatgtatcaccttc 337  Q
    |||||||||| |||||||||    
T  21 tagttatatgaatcaccttc 2  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 4e-30; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 32409713 - 32409642
Alignment:
Q  68 taagtgttcacgtgaaattgatgtagctcactaaaaatgacatcgttgcagatgacacaaaacaatgttgga 139  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32409713 taagtgtttacgtgaaattgatgtagctcactaaaaatgacatcgttgcagatgacacaaaacaatgttgga 32409642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 65 - 139
Target Start/End: Complemental strand, 32373680 - 32373606
Alignment:
Q  65 ttataagtgttcacgtgaaattgatgtagctcactaaaaatgacatcgttgcagatgacacaaaacaatgttgga 139  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  32373680 ttataagtgtttacgtgaaattgatgtagctcactaaaaatgacattgttgcagatgacacaaaacaatgctgga 32373606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 18254385 - 18254434
Alignment:
Q  21 aaaaataacctatatgacagggg-taaatcaccattaacccttaattata 69  Q
    |||||| |||||||| ||||||| |||||||||||||||||||| |||||    
T  18254385 aaaaatgacctatattacagggggtaaatcaccattaacccttatttata 18254434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 28519642 - 28519683
Alignment:
Q  19 ctaaaaataacctatatgacaggggtaaatcaccattaaccc 60  Q
    |||||||| |||||||| ||||||||||| ||||||||||||    
T  28519642 ctaaaaatgacctatattacaggggtaaagcaccattaaccc 28519683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 38861135 - 38861095
Alignment:
Q  21 aaaaataacctatatgacaggggtaaatcaccattaaccct 61  Q
    ||||||||| ||||| ||||||||||| |||||||||||||    
T  38861135 aaaaataacttatattacaggggtaaaacaccattaaccct 38861095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 4111 - 4066
Alignment:
Q  21 aaaaataacctatatgacaggggtaaatcaccattaacccttaatt 66  Q
    |||||| || ||||| ||||||||||||||||||||||||||||||    
T  4111 aaaaatgacttatattacaggggtaaatcaccattaacccttaatt 4066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 39302133 - 39302176
Alignment:
Q  21 aaaaataacctatatgacaggggtaaatcaccattaacccttaa 64  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||    
T  39302133 aaaaatgacctatattacaggggtaaaacaccattaacccttaa 39302176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 5422780 - 5422736
Alignment:
Q  22 aaaataacctatatgacaggggtaaatcaccattaacccttaatt 66  Q
    ||||| |||||||| ||||||||||||||| ||||||||| ||||    
T  5422780 aaaatgacctatattacaggggtaaatcactattaaccctaaatt 5422736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 15710812 - 15710858
Alignment:
Q  21 aaaaataacctatatgacaggggtaaatcaccattaacccttaatta 67  Q
    |||||| |||||||| ||| ||||||| |||||||||||||||||||    
T  15710812 aaaaatgacctatattacaagggtaaagcaccattaacccttaatta 15710858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 25170995 - 25170955
Alignment:
Q  21 aaaaataacctatatgacaggggtaaatcaccattaaccct 61  Q
    |||||| |||||||| ||||||||||| |||||||||||||    
T  25170995 aaaaatgacctatattacaggggtaaaacaccattaaccct 25170955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 35097781 - 35097826
Alignment:
Q  21 aaaaataacctatatgacaggggtaaatcaccattaacccttaatt 66  Q
    |||||| |||||||| ||||||||||| ||||||||||||| ||||    
T  35097781 aaaaatgacctatattacaggggtaaaacaccattaaccctaaatt 35097826  T

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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 18656295 - 18656335
Alignment:
Q  21 aaaaataacctatatgacaggggtaaatcaccattaaccct 61  Q
    |||||| |||||||| |||||| ||||||||||||||||||    
T  18656295 aaaaatgacctatattacagggataaatcaccattaaccct 18656335  T

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Target: chr2 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 30728736 - 30728696
Alignment:
Q  21 aaaaataacctatatgacaggggtaaatcaccattaaccct 61  Q
    |||||||| |||||| ||||||||||| |||||||||||||    
T  30728736 aaaaataatctatattacaggggtaaaacaccattaaccct 30728696  T

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Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 43015218 - 43015258
Alignment:
Q  21 aaaaataacctatatgacaggggtaaatcaccattaaccct 61  Q
    |||||| |||||||| ||||||||||| |||||||||||||    
T  43015218 aaaaatgacctatattacaggggtaaagcaccattaaccct 43015258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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