View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11382_low_22 (Length: 321)

Name: NF11382_low_22
Description: NF11382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11382_low_22
NF11382_low_22
[»] chr8 (40 HSPs)
chr8 (163-276)||(32333138-32333251)
chr8 (163-276)||(28817280-28817393)
chr8 (163-276)||(35779488-35779601)
chr8 (163-276)||(1331-1444)
chr8 (164-276)||(6602510-6602622)
chr8 (164-276)||(6677963-6678075)
chr8 (163-276)||(42885198-42885311)
chr8 (163-275)||(1078639-1078751)
chr8 (163-276)||(7792685-7792798)
chr8 (163-276)||(7813346-7813459)
chr8 (163-276)||(42192630-42192743)
chr8 (163-276)||(70514-70627)
chr8 (163-276)||(4530973-4531086)
chr8 (163-276)||(10963233-10963344)
chr8 (175-269)||(31532128-31532222)
chr8 (172-276)||(39303333-39303438)
chr8 (164-276)||(40911245-40911356)
chr8 (169-276)||(5385362-5385469)
chr8 (173-276)||(9292042-9292145)
chr8 (163-276)||(3822420-3822533)
chr8 (163-276)||(12534711-12534822)
chr8 (172-276)||(31969720-31969824)
chr8 (172-276)||(45264640-45264743)
chr8 (163-276)||(6099596-6099709)
chr8 (163-276)||(39435306-39435419)
chr8 (163-241)||(13891149-13891227)
chr8 (163-276)||(41849223-41849335)
chr8 (200-278)||(18386730-18386808)
chr8 (173-278)||(18752363-18752468)
chr8 (172-276)||(29425381-29425479)
chr8 (163-223)||(20269607-20269667)
chr8 (163-223)||(21056236-21056296)
chr8 (163-259)||(33731455-33731551)
chr8 (173-276)||(7403696-7403798)
chr8 (163-237)||(31695260-31695334)
chr8 (163-240)||(9775033-9775110)
chr8 (175-278)||(40932731-40932834)
chr8 (220-278)||(22203722-22203780)
chr8 (163-276)||(42364694-42364805)
chr8 (163-234)||(14400781-14400852)
[»] chr1 (42 HSPs)
chr1 (163-276)||(28455898-28456011)
chr1 (113-278)||(11688285-11688452)
chr1 (163-276)||(32007098-32007211)
chr1 (163-276)||(39276374-39276487)
chr1 (163-276)||(41761402-41761515)
chr1 (163-278)||(45813002-45813117)
chr1 (163-276)||(5055779-5055892)
chr1 (163-276)||(41808226-41808339)
chr1 (163-276)||(48660046-48660159)
chr1 (27-133)||(11691611-11691717)
chr1 (163-278)||(192437-192552)
chr1 (163-276)||(29994374-29994487)
chr1 (172-276)||(20772-20876)
chr1 (163-275)||(35945822-35945934)
chr1 (163-244)||(41039294-41039375)
chr1 (163-278)||(5943703-5943818)
chr1 (163-265)||(50106187-50106289)
chr1 (172-279)||(7059488-7059595)
chr1 (163-276)||(46447364-46447481)
chr1 (164-278)||(26032820-26032937)
chr1 (19-81)||(11688449-11688511)
chr1 (170-278)||(4065983-4066091)
chr1 (163-267)||(13109803-13109907)
chr1 (175-276)||(7275705-7275806)
chr1 (172-245)||(35110099-35110172)
chr1 (208-276)||(29587276-29587344)
chr1 (172-276)||(49783731-49783835)
chr1 (163-238)||(3716424-3716499)
chr1 (173-275)||(21938967-21939069)
chr1 (172-265)||(13097339-13097432)
chr1 (173-237)||(26264537-26264601)
chr1 (172-239)||(778635-778702)
chr1 (163-278)||(38817190-38817305)
chr1 (169-268)||(39284322-39284421)
chr1 (175-218)||(13183179-13183222)
chr1 (175-241)||(2088908-2088974)
chr1 (169-227)||(9886889-9886947)
chr1 (162-216)||(25931147-25931201)
chr1 (173-275)||(32982351-32982453)
chr1 (210-276)||(35224364-35224430)
chr1 (193-226)||(16770177-16770210)
chr1 (229-278)||(47111479-47111528)
[»] chr4 (54 HSPs)
chr4 (163-278)||(45874077-45874192)
chr4 (163-276)||(34739304-34739417)
chr4 (163-276)||(23417474-23417587)
chr4 (163-276)||(28798379-28798492)
chr4 (163-276)||(43139897-43140010)
chr4 (163-278)||(12735453-12735568)
chr4 (163-276)||(1173975-1174088)
chr4 (163-276)||(19849494-19849607)
chr4 (163-276)||(26424849-26424961)
chr4 (163-276)||(53457848-53457961)
chr4 (163-276)||(54768423-54768536)
chr4 (173-276)||(55214676-55214779)
chr4 (163-276)||(12867865-12867978)
chr4 (163-276)||(18257353-18257466)
chr4 (163-273)||(29581035-29581144)
chr4 (171-276)||(238457-238562)
chr4 (163-278)||(22608007-22608122)
chr4 (172-275)||(55400253-55400356)
chr4 (181-275)||(39807869-39807963)
chr4 (163-276)||(19225283-19225396)
chr4 (163-268)||(19673920-19674025)
chr4 (163-276)||(11278006-11278115)
chr4 (176-275)||(23710337-23710436)
chr4 (162-276)||(2864738-2864852)
chr4 (163-276)||(50033405-50033519)
chr4 (163-276)||(19814129-19814242)
chr4 (163-268)||(24417869-24417974)
chr4 (161-278)||(24517972-24518089)
chr4 (159-240)||(33770628-33770708)
chr4 (187-276)||(49030754-49030842)
chr4 (163-239)||(1966611-1966687)
chr4 (185-278)||(32778147-32778238)
chr4 (182-276)||(37134072-37134166)
chr4 (163-278)||(51287623-51287739)
chr4 (173-267)||(516457-516551)
chr4 (173-278)||(2804544-2804647)
chr4 (173-275)||(12767112-12767214)
chr4 (184-278)||(22910269-22910363)
chr4 (184-278)||(22968159-22968253)
chr4 (163-225)||(31015057-31015119)
chr4 (163-225)||(52171981-52172043)
chr4 (163-240)||(37620677-37620753)
chr4 (163-276)||(52768292-52768404)
chr4 (163-215)||(50347320-50347372)
chr4 (210-269)||(3465783-3465842)
chr4 (163-240)||(2075565-2075642)
chr4 (207-276)||(32441119-32441188)
chr4 (175-218)||(23532129-23532172)
chr4 (163-225)||(16555382-16555444)
chr4 (173-223)||(48822890-48822940)
chr4 (173-234)||(1125953-1126014)
chr4 (249-278)||(16342826-16342855)
chr4 (202-278)||(16887581-16887657)
chr4 (171-215)||(19119214-19119258)
[»] scaffold0032 (1 HSPs)
scaffold0032 (163-276)||(56505-56618)
[»] chr2 (44 HSPs)
chr2 (163-276)||(26605648-26605761)
chr2 (163-278)||(34460391-34460506)
chr2 (163-276)||(10639597-10639710)
chr2 (163-276)||(37197601-37197714)
chr2 (161-276)||(19537331-19537446)
chr2 (163-276)||(33083545-33083658)
chr2 (163-276)||(11708702-11708815)
chr2 (163-276)||(23839883-23839996)
chr2 (163-276)||(11459739-11459852)
chr2 (163-276)||(45125156-45125269)
chr2 (161-276)||(29659207-29659322)
chr2 (162-276)||(19816244-19816358)
chr2 (159-276)||(11816538-11816655)
chr2 (163-276)||(19048778-19048891)
chr2 (163-276)||(39535525-39535638)
chr2 (172-278)||(38440197-38440303)
chr2 (169-272)||(4851348-4851451)
chr2 (172-278)||(43778468-43778574)
chr2 (163-276)||(39831435-39831547)
chr2 (163-275)||(7275877-7275989)
chr2 (174-278)||(15782612-15782715)
chr2 (163-278)||(27137909-27138023)
chr2 (175-275)||(16654388-16654488)
chr2 (169-276)||(34234554-34234659)
chr2 (175-278)||(40786212-40786315)
chr2 (175-278)||(43684091-43684194)
chr2 (172-225)||(42578243-42578296)
chr2 (175-276)||(7349122-7349223)
chr2 (172-278)||(44181887-44181993)
chr2 (175-276)||(4800900-4801001)
chr2 (163-278)||(42025692-42025808)
chr2 (175-245)||(40825161-40825231)
chr2 (172-276)||(21312229-21312331)
chr2 (163-240)||(33001762-33001839)
chr2 (173-223)||(15344966-15345016)
chr2 (158-278)||(6054991-6055111)
chr2 (163-275)||(33564900-33565010)
chr2 (202-275)||(38400494-38400567)
chr2 (188-278)||(15072115-15072204)
chr2 (174-239)||(20497592-20497657)
chr2 (163-276)||(34239811-34239924)
chr2 (228-276)||(25501839-25501887)
chr2 (175-278)||(34093259-34093363)
chr2 (163-218)||(41780417-41780473)
[»] chr7 (51 HSPs)
chr7 (163-275)||(2146661-2146773)
chr7 (158-276)||(23358209-23358327)
chr7 (163-276)||(4106762-4106875)
chr7 (163-276)||(40058262-40058375)
chr7 (163-276)||(44083964-44084077)
chr7 (163-276)||(4107333-4107446)
chr7 (163-276)||(31770523-31770636)
chr7 (158-271)||(47570704-47570817)
chr7 (163-276)||(47250242-47250355)
chr7 (163-275)||(25546266-25546378)
chr7 (163-276)||(8439102-8439215)
chr7 (163-276)||(25112238-25112351)
chr7 (163-268)||(38781199-38781304)
chr7 (163-276)||(7162781-7162892)
chr7 (170-276)||(41183839-41183945)
chr7 (163-275)||(48146778-48146890)
chr7 (171-276)||(5772818-5772923)
chr7 (172-277)||(11355846-11355951)
chr7 (179-278)||(27229484-27229584)
chr7 (173-276)||(43753754-43753858)
chr7 (163-276)||(28603035-28603148)
chr7 (171-276)||(38033753-38033858)
chr7 (164-276)||(43203330-43203442)
chr7 (163-278)||(5587302-5587417)
chr7 (163-278)||(5592263-5592378)
chr7 (163-278)||(32606321-32606436)
chr7 (163-269)||(39513974-39514080)
chr7 (163-275)||(47557806-47557918)
chr7 (161-276)||(15634868-15634983)
chr7 (163-276)||(29484746-29484859)
chr7 (172-278)||(43170939-43171045)
chr7 (169-218)||(19630665-19630714)
chr7 (160-275)||(27915568-27915684)
chr7 (163-275)||(4001835-4001945)
chr7 (163-275)||(48444143-48444255)
chr7 (161-267)||(5462939-5463045)
chr7 (172-276)||(42081619-42081720)
chr7 (187-276)||(13887195-13887282)
chr7 (182-232)||(34763510-34763560)
chr7 (163-245)||(35577867-35577949)
chr7 (172-238)||(40657591-40657657)
chr7 (163-240)||(10220464-10220540)
chr7 (171-276)||(25872787-25872892)
chr7 (172-268)||(35309886-35309982)
chr7 (172-223)||(31288224-31288275)
chr7 (177-238)||(18506281-18506341)
chr7 (168-278)||(40642996-40643099)
chr7 (196-276)||(47960979-47961059)
chr7 (176-238)||(10626451-10626513)
chr7 (175-211)||(23036208-23036244)
chr7 (179-275)||(25049965-25050061)
[»] scaffold1348 (1 HSPs)
scaffold1348 (163-276)||(853-966)
[»] scaffold0119 (2 HSPs)
scaffold0119 (163-276)||(13942-14055)
scaffold0119 (163-276)||(19622-19735)
[»] chr5 (31 HSPs)
chr5 (163-276)||(13203981-13204094)
chr5 (163-276)||(21018247-21018360)
chr5 (163-276)||(4824930-4825043)
chr5 (163-276)||(35317688-35317801)
chr5 (163-273)||(31909376-31909486)
chr5 (163-276)||(12257380-12257493)
chr5 (172-275)||(2971009-2971112)
chr5 (169-275)||(29265900-29266006)
chr5 (175-276)||(6021016-6021117)
chr5 (175-278)||(40177646-40177749)
chr5 (175-276)||(1191543-1191644)
chr5 (169-278)||(21112071-21112180)
chr5 (163-232)||(32143405-32143474)
chr5 (181-275)||(27721456-27721550)
chr5 (163-276)||(8734020-8734134)
chr5 (172-278)||(14270546-14270652)
chr5 (172-275)||(23262573-23262672)
chr5 (163-268)||(28591341-28591446)
chr5 (173-276)||(3386894-3387004)
chr5 (161-241)||(17984731-17984811)
chr5 (172-278)||(35545955-35546061)
chr5 (172-276)||(2786295-2786398)
chr5 (163-276)||(11124676-11124789)
chr5 (178-275)||(2755950-2756047)
chr5 (196-276)||(9576985-9577065)
chr5 (163-207)||(17465170-17465214)
chr5 (175-239)||(41580078-41580142)
chr5 (163-218)||(19181793-19181847)
chr5 (163-213)||(4925673-4925723)
chr5 (212-277)||(3049094-3049159)
chr5 (234-275)||(30127919-30127960)
[»] chr3 (36 HSPs)
chr3 (163-276)||(7824445-7824558)
chr3 (163-276)||(43247641-43247754)
chr3 (161-276)||(29689471-29689586)
chr3 (163-276)||(54151672-54151785)
chr3 (163-278)||(28844526-28844642)
chr3 (163-276)||(3112986-3113099)
chr3 (163-276)||(9349667-9349780)
chr3 (163-276)||(36228985-36229098)
chr3 (163-276)||(51665916-51666029)
chr3 (171-276)||(54158290-54158395)
chr3 (163-276)||(4601449-4601562)
chr3 (178-276)||(55018040-55018138)
chr3 (163-276)||(52500862-52500975)
chr3 (174-278)||(1778873-1778977)
chr3 (163-276)||(42392796-42392909)
chr3 (173-276)||(35461480-35461583)
chr3 (163-276)||(33334632-33334745)
chr3 (171-276)||(29750645-29750749)
chr3 (173-269)||(38257304-38257400)
chr3 (163-242)||(7958627-7958706)
chr3 (163-226)||(55320391-55320454)
chr3 (163-276)||(41377608-41377716)
chr3 (163-275)||(475272-475383)
chr3 (163-275)||(32001415-32001527)
chr3 (172-276)||(43775247-43775351)
chr3 (173-275)||(40756728-40756831)
chr3 (172-266)||(47635005-47635099)
chr3 (177-275)||(8151373-8151471)
chr3 (172-278)||(50729546-50729652)
chr3 (172-278)||(50783197-50783303)
chr3 (172-278)||(51054723-51054829)
chr3 (181-278)||(448884-448981)
chr3 (163-209)||(2590801-2590847)
chr3 (175-276)||(53182757-53182858)
chr3 (172-275)||(27230692-27230794)
chr3 (172-277)||(8137633-8137736)
[»] scaffold0044 (1 HSPs)
scaffold0044 (164-276)||(9965-10077)
[»] chr6 (23 HSPs)
chr6 (163-276)||(33704240-33704353)
chr6 (163-276)||(33621518-33621631)
chr6 (163-276)||(21037315-21037427)
chr6 (163-278)||(4464149-4464264)
chr6 (163-276)||(28322956-28323069)
chr6 (163-276)||(2959173-2959286)
chr6 (163-275)||(16518448-16518558)
chr6 (163-276)||(19145495-19145607)
chr6 (163-276)||(21000716-21000829)
chr6 (163-280)||(29009641-29009758)
chr6 (163-232)||(35218631-35218700)
chr6 (172-278)||(24619079-24619185)
chr6 (163-276)||(361035-361148)
chr6 (172-276)||(32289370-32289473)
chr6 (198-277)||(11572031-11572110)
chr6 (173-278)||(12252045-12252150)
chr6 (163-232)||(28592119-28592188)
chr6 (164-276)||(584776-584887)
chr6 (163-278)||(32353932-32354046)
chr6 (180-278)||(10999416-10999514)
chr6 (175-242)||(7014313-7014380)
chr6 (172-226)||(11456047-11456101)
chr6 (163-237)||(22576244-22576318)
[»] scaffold0053 (1 HSPs)
scaffold0053 (172-278)||(22185-22291)
[»] scaffold0038 (1 HSPs)
scaffold0038 (163-276)||(114276-114389)
[»] scaffold0067 (1 HSPs)
scaffold0067 (163-276)||(34842-34956)
[»] scaffold0352 (1 HSPs)
scaffold0352 (163-275)||(8934-9046)
[»] scaffold0360 (1 HSPs)
scaffold0360 (173-278)||(14517-14632)
[»] scaffold0631 (1 HSPs)
scaffold0631 (163-205)||(4413-4455)
[»] scaffold0079 (1 HSPs)
scaffold0079 (249-278)||(50006-50035)


Alignment Details
Target: chr8 (Bit Score: 98; Significance: 3e-48; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 32333251 - 32333138
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  32333251 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgc 32333152  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  32333151 aatttcggcatttg 32333138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 28817393 - 28817280
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||| ||||||||||||||||    
T  28817393 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcacaacgtccggccttgc 28817294  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  28817293 aatttcggcatttg 28817280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 35779488 - 35779601
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  35779488 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgc 35779587  T
Q  263 aatttcggcatttg 276  Q
    ||||| ||||||||    
T  35779588 aattttggcatttg 35779601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 1331 - 1444
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||    
T  1331 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccagggtcacaacgtccggccttgc 1430  T
Q  263 aatttcggcatttg 276  Q
    ||||| ||||||||    
T  1431 aattttggcatttg 1444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 164 - 276
Target Start/End: Original strand, 6602510 - 6602622
Alignment:
Q  164 ttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgca 263  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   |||||||||||||||    
T  6602510 tttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgca 6602609  T
Q  264 atttcggcatttg 276  Q
    |||||||||||||    
T  6602610 atttcggcatttg 6602622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 164 - 276
Target Start/End: Original strand, 6677963 - 6678075
Alignment:
Q  164 ttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgca 263  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   |||||||||||||||    
T  6677963 tttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgca 6678062  T
Q  264 atttcggcatttg 276  Q
    |||||||||||||    
T  6678063 atttcggcatttg 6678075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 42885311 - 42885198
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||   ||||||||||||||    
T  42885311 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcatgacgtccggccttgc 42885212  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  42885211 aatttcggcatttg 42885198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 163 - 275
Target Start/End: Original strand, 1078639 - 1078751
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||   ||||||||||||||    
T  1078639 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacctgggtcatgacgtccggccttgc 1078738  T
Q  263 aatttcggcattt 275  Q
    |||||||||||||    
T  1078739 aatttcggcattt 1078751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 7792798 - 7792685
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||| || |||||||||||||| ||| |||||||| |||||||    
T  7792798 ttttttttggtcttagatgaagtagtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgagtcacaacgtccagccttgc 7792699  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  7792698 aatttcggcatttg 7792685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 7813459 - 7813346
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||| |||| |||||||||||    
T  7813459 ttttttttggttttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgagtcacaacatccggccttgc 7813360  T
Q  263 aatttcggcatttg 276  Q
    |||||| |||||||    
T  7813359 aatttcagcatttg 7813346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 42192630 - 42192743
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||| ||||||   ||||||||||||||    
T  42192630 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaactcgggtcatgacgtccggccttgc 42192729  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  42192730 aatttcggcatttg 42192743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 70514 - 70627
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||   ||||||| ||||||    
T  70514 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcaaacccgggtcatgacgtccgaccttgc 70613  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  70614 aatttcggcatttg 70627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 4530973 - 4531086
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||| ||||||||| |||||||||||||| || ||||||| ||||||||||||||||||   |||||| |||||||    
T  4530973 ttttttttggtcttagatgaagtggtaaaccactgaaattaaactcacacacagctgtgaggtcccgggttcgaacccgggtcatgacgtccagccttgc 4531072  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  4531073 aatttcggcatttg 4531086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 10963233 - 10963344
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||| |||||||||||| || || |||||| ||||||||     
T  10963233 ttttttttggtcttagatgaagtggtaatccactgaaaataaact--cacacaactgtgaggtcccgggttcgaacctggatcacaacgttcggccttgt 10963330  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  10963331 aatttcggcatttg 10963344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 31532128 - 31532222
Alignment:
Q  175 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcg 269  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||| | ||||| || ||||||| |||||||||||||||||||||||    
T  31532128 ttagatgaagtggtaatccactgaaattaaactcacacacaactgtgaggtccccggttcaaatccgggtcacaacgtccggccttgcaatttcg 31532222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 172 - 276
Target Start/End: Complemental strand, 39303438 - 39303333
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaa-ctcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcgg 270  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||| |||||  |||   ||||||||||||||||||||||    
T  39303438 gtcttagatgaagtggtaatccactgaaattaaaactcacacacaactgtgaggtctcgggttcaaacccatgtcatgacgtccggccttgcaatttcgg 39303339  T
Q  271 catttg 276  Q
    ||||||    
T  39303338 catttg 39303333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 40911356 - 40911245
Alignment:
Q  164 ttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgca 263  Q
    |||| ||| |||||||||||||||||| ||||||||| ||||||||||||||  | ||||||| ||| |||||||||||||| | |||||||||||||||    
T  40911356 tttttttgatcttagatgaagtggtaagccactgaaattaaactcacacacagttgtgaggtcccgg-ttcgaacccgggtcacgacgtccggccttgca 40911258  T
Q  264 atttcggcatttg 276  Q
    |||||||||||||    
T  40911257 atttcggcatttg 40911245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 169 - 276
Target Start/End: Complemental strand, 5385469 - 5385362
Alignment:
Q  169 ttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttc 268  Q
    |||||| || ||||||||||||  |||||||| ||||||||||||||||| ||||||| |||||||||||| ||||| | |||||| |||||||||||||    
T  5385469 ttggtcataaatgaagtggtaaatcactgaaattaaactcacacacaactgtgaggtcccgggttcgaacctgggtcacgacgtccagccttgcaatttc 5385370  T
Q  269 ggcatttg 276  Q
    ||||||||    
T  5385369 ggcatttg 5385362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 173 - 276
Target Start/End: Complemental strand, 9292145 - 9292042
Alignment:
Q  173 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||| || |||||||  |||||| ||||||||||| || |||||||| ||    
T  9292145 tcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaagtcccgagttcgaattcgggtcacaacgtccggctttacaatttcgaca 9292046  T
Q  273 tttg 276  Q
    ||||    
T  9292045 tttg 9292042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 3822533 - 3822420
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || |||||||| ||||||||||| |||| ||| ||||||||||||||||| |||| ||  ||||||||||||||||| ||||||||| |||| |    
T  3822533 tttttttttgtcttagaagaagtggtaattcactaaaattaaactcacacacaactgtgagatcctgggttcgaacccgggtcacaacgtccgaccttac 3822434  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  3822433 aatttcggcatttg 3822420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 12534711 - 12534822
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||||| ||||||||||||||  ||| ||||| |||| ||  |||||||||||||| || | ||||||||||||||    
T  12534711 tttttttttgtcttagatgaagtggtaatctactgaaaataaact--cacgcaactgtgagatcctgggttcgaacccggatcacgacgtccggccttgc 12534808  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  12534809 aatttcggcatttg 12534822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 172 - 276
Target Start/End: Original strand, 31969720 - 31969824
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||| || |||||||||||| ||   ||||| ||||||| |||||||||    
T  31969720 gtcttagatgaagtggtaaaccactgaaattaaattcacacacaactttgaggtcccgtgttcgaacccggatcatgacgtctggccttgaaatttcggc 31969819  T
Q  272 atttg 276  Q
    |||||    
T  31969820 atttg 31969824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 172 - 276
Target Start/End: Original strand, 45264640 - 45264743
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    |||||||| |||||||||||||||||||| |||||||||||| |||| ||||||| |||||||||||||| ||| | |||| || || ||||||||||||    
T  45264640 gtcttagaggaagtggtaatccactgaaattaaactcacacaaaactgtgaggtcccgggttcgaacccgagtcacgacgttcgacc-tgcaatttcggc 45264738  T
Q  272 atttg 276  Q
    |||||    
T  45264739 atttg 45264743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 6099709 - 6099596
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||| ||||| ||| ||||||||| | ||| | |||||| |||||||||||| ||||||   ||||||||||||||    
T  6099709 tttttttttgtcttagatgaagtggtaaaccactaaaactaaactcacgcgcaattgtgaggtttcgggttcgaactcgggtcatgacgtccggccttgc 6099610  T
Q  263 aatttcggcatttg 276  Q
    ||||||| ||||||    
T  6099609 aatttcgacatttg 6099596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 39435419 - 39435306
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || |||||||||||||| |||||||||  ||| ||||||||||||||||| ||||||||||||||||||||| | ||   ||||||| ||||||    
T  39435419 tttttttttgtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtctcgggttcgaacccagatcatgacgtccgaccttgc 39435320  T
Q  263 aatttcggcatttg 276  Q
    ||||| | ||||||    
T  39435319 aattttgacatttg 39435306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 13891227 - 13891149
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccg 241  Q
    ||||| || ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||   ||||||||||||    
T  13891227 tttttttttgtcttagatgaagtggtaaaccactgaaaataaactcacacacaactgtgaggtcctaggttcgaacccg 13891149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 41849223 - 41849335
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||| ||||||||||| |||||||| ||||||| ||||||||||||||||  ||||||  ||| ||||||||| | || | ||||||| ||||||    
T  41849223 ttttttttgatcttagatgaaatggtaatc-actgaaattaaactcacacacaacagtgaggttccggattcgaacccagatcacgacgtccgaccttgc 41849321  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  41849322 aatttcggcatttg 41849335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 278
Target Start/End: Complemental strand, 18386808 - 18386730
Alignment:
Q  200 aataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 278  Q
    ||||||||||||||||||| ||||||| |||||||||||||| |||   || |||| |||||||||||| |||||||||    
T  18386808 aataaactcacacacaactgtgaggtcccgggttcgaacccgagtcatgacatccgaccttgcaatttcagcatttgtc 18386730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 278
Target Start/End: Complemental strand, 18752468 - 18752363
Alignment:
Q  173 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 272  Q
    ||||| ||||||||  |||||||||||| ||||| ||||||||||| | ||||  ||||||||||||| | || | ||||||| |||| ||||||||| |    
T  18752468 tcttanatgaagtgtcaatccactgaaattaaacccacacacaactgtaaggttccgggttcgaaccccgatcacgacgtccgaccttacaatttcggta 18752369  T
Q  273 tttgtc 278  Q
    ||||||    
T  18752368 tttgtc 18752363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 172 - 276
Target Start/End: Complemental strand, 29425479 - 29425381
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |  ||| || ||||      ||||||||   ||||||||||||||||||| |||    
T  29425479 gtcttagatgaagtggtaatccactgaaattaaactcacacacaattgcgagatcccggg------cccgggtcatgacgtccggccttgcaattttggc 29425386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 20269667 - 20269607
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgag 223  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  20269667 ttttttttgttcttagatgaaatggtaatccattgaaaataaactcacacacaactgtgag 20269607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 21056296 - 21056236
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgag 223  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  21056296 ttttttttgttcttagatgaaatggtaatccattgaaaataaactcacacacaactgtgag 21056236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 33731455 - 33731551
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggcct 259  Q
    ||||| || |||||||| |||||||||| ||||| ||| |||||||||||||||||  |||||| || ||| ||||||||||| | ||||| |||||    
T  33731455 tttttttttgtcttagaagaagtggtaaaccactaaaattaaactcacacacaactgggaggtcccgagtttgaacccgggtcacgacgtctggcct 33731551  T

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Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 276
Target Start/End: Original strand, 7403696 - 7403798
Alignment:
Q  173 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 272  Q
    ||||||||||||||||||| |||||||| ||| |||||| |||||| ||| ||||||| ||||||| || ||| | ||||||| |||| |||||| | ||    
T  7403696 tcttagatgaagtggtaat-cactgaaattaagctcacaaacaactgtgatgtctcggattcgaactcgagtcacgacgtccgaccttacaattttgaca 7403794  T
Q  273 tttg 276  Q
    ||||    
T  7403795 tttg 7403798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 31695260 - 31695334
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaa 237  Q
    ||||| || ||||||||||||||||||| ||| ||||| ||||||||||||||| | ||||||| | ||||||||    
T  31695260 tttttttttgtcttagatgaagtggtaaaccattgaaattaaactcacacacaattgtgaggtcccaggttcgaa 31695334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 9775033 - 9775110
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaaccc 240  Q
    ||||| || |||||||||||||| |||||||| | ||| |||||||||||| |||| ||||||  |||||||||||||    
T  9775033 tttttttttgtcttagatgaagttgtaatccattcaaattaaactcacacataactgtgaggttccgggttcgaaccc 9775110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 40932834 - 40932731
Alignment:
Q  175 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 274  Q
    |||||||||||||||||| ||| ||| |||| |||||||||||| |||| | |||| |||||| |||| || | ||||||   ||| |||||||| ||||    
T  40932834 ttagatgaagtggtaatctactaaaattaaagtcacacacaactgtgagatttcggattcgaatccggatcacgacgtccaatcttacaatttcgacatt 40932735  T
Q  275 tgtc 278  Q
    ||||    
T  40932734 tgtc 40932731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 278
Target Start/End: Complemental strand, 22203780 - 22203722
Alignment:
Q  220 tgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 278  Q
    ||||||||||| |||||||||||||| | ||||| | |||||||||||||| |||||||    
T  22203780 tgaggtctcggattcgaacccgggtcacgacgtctgaccttgcaatttcggtatttgtc 22203722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 42364694 - 42364805
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||||||| |||||||| ||||||||| | ||||||| ||||||||||||||||| |||  | |||| ||| |||||   ||  |||||| ||| ||||    
T  42364694 tttttgttg-tcttagataaagtggtaaactactgaaattaaactcacacacaactgtgaaatttcggattcaaaccc-aatcataacgtctggctttgc 42364791  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  42364792 aatttcggcatttg 42364805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 14400852 - 14400781
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttc 234  Q
    ||||| || ||||||||||||||||||| |||||  || ||||||||| ||||| | ||||||| |||||||    
T  14400852 tttttttttgtcttagatgaagtggtaaaccacttgaattaaactcactcacaattgtgaggtcccgggttc 14400781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 3e-48; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 28456011 - 28455898
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  28456011 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgc 28455912  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  28455911 aatttcggcatttg 28455898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 113 - 278
Target Start/End: Complemental strand, 11688452 - 11688285
Alignment:
Q  113 gttgtataatagaatgaaaaatctcttagtcttttttcttctttcttatatttttgtt--ggtcttagatgaagtggtaatccactgaaaataaactcac 210  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||||||||||||||||    
T  11688452 gttgtataatagaatgaaaaatcctttagtcttttttcttctttcttatattttttttttggtcttggatgaagtggtaatccactgaaaataaactcac 11688353  T
Q  211 acacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 278  Q
    |||||||||||| |||  |  |||||||| ||||| |||||| ||| ||||||||||||  |||||||    
T  11688352 acacaactctgaagtcctgaattcgaaccagggtcacaacgttcgggcttgcaatttcgatatttgtc 11688285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 32007211 - 32007098
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  32007211 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 32007112  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  32007111 aatttcggcatttg 32007098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 39276487 - 39276374
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  39276487 ttttttttggtcttaaatgaagtggtaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgc 39276388  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  39276387 aatttcggcatttg 39276374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 41761402 - 41761515
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||||||||||||||||    
T  41761402 ttttttttggtcttggatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtccggccttgc 41761501  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  41761502 aatttcggcatttg 41761515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 163 - 278
Target Start/End: Original strand, 45813002 - 45813117
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| | | ||||| ||||||    
T  45813002 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgatgtccgaccttgc 45813101  T
Q  263 aatttcggcatttgtc 278  Q
    ||||||||||||||||    
T  45813102 aatttcggcatttgtc 45813117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 5055779 - 5055892
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  5055779 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 5055878  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  5055879 aatttcggcatttg 5055892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 41808339 - 41808226
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||   ||||||||||||||    
T  41808339 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttccgggttcgaacccgggtcatgacgtccggccttgc 41808240  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  41808239 aatttcggcatttg 41808226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 48660159 - 48660046
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||  |||||||||||||||    
T  48660159 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcataacgtccggccttgc 48660060  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  48660059 aatttcggcatttg 48660046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 11691717 - 11691611
Alignment:
Q  27 tcattaatattttattttctttttatattccaatgaagcttttcatttacggttggttgttaatgtttgatgattcaaggtcttgtgttgtataatagaa 126  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||    
T  11691717 tcattaatattttattttctttttatattctaatgaagcttttcatgtacggttcgttgttaatgtttgatgattcatggtgttgtgttgtataatagaa 11691618  T
Q  127 tgaaaaa 133  Q
    | |||||    
T  11691617 taaaaaa 11691611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 163 - 278
Target Start/End: Complemental strand, 192552 - 192437
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||  |||||||||| ||| || ||||||||||||||||    
T  192552 ttttttttggtcttagatgaagtggtaatccgctgaaaataaactcacacacaactgtgaggtcctgggttcgaacacggatcacaacgtccggccttgc 192453  T
Q  263 aatttcggcatttgtc 278  Q
    |||||  |||||||||    
T  192452 aattttagcatttgtc 192437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 29994374 - 29994487
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||||||||||||||||||| ||   ||||| ||||||||    
T  29994374 ttttttttggtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtctcgggttcgaacccggatcatgacgtctggccttgc 29994473  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  29994474 aatttcggcatttg 29994487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 172 - 276
Target Start/End: Complemental strand, 20876 - 20772
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| ||||||| |  ||||| ||||||||||||||||    
T  20876 gtcttagatgaagtggtaatccactaaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacggcgtcctgccttgcaatttcggc 20777  T
Q  272 atttg 276  Q
    |||||    
T  20776 atttg 20772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 163 - 275
Target Start/End: Complemental strand, 35945934 - 35945822
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||  ||||||||||||| |||| |||||||| ||||| |    
T  35945934 ttttttttgatcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggttccgggttcgaacccaggtcacaacgtccagccttac 35945835  T
Q  263 aatttcggcattt 275  Q
    |||||||||||||    
T  35945834 aatttcggcattt 35945822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 41039294 - 41039375
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggt 244  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  41039294 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggt 41039375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 163 - 278
Target Start/End: Complemental strand, 5943818 - 5943703
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||| ||||||| ||||| |||||||||| |||||| |||||||  | ||||||||||||||| | ||||||||||||||    
T  5943818 tttttttttgtcttagatgaagtgataatccattgaaattaaactcacaaacaactgtgaggtcctgagttcgaacccgggtcacgacgtccggccttgc 5943719  T
Q  263 aatttcggcatttgtc 278  Q
    ||||||||||||||||    
T  5943718 aatttcggcatttgtc 5943703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 50106187 - 50106289
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||| |||||||| ||| ||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| |||||| |||||||||    
T  50106187 tttttatttgtcatagatgaaatggcaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacaacgttcggccttgc 50106286  T
Q  263 aat 265  Q
    |||    
T  50106287 aat 50106289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 172 - 279
Target Start/End: Complemental strand, 7059595 - 7059488
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||| | |||||||||||||| | ||||| | ||||||||||| | |    
T  7059595 gtcttagataaagtggtaatccacttaaattaaactcacacacaactgtgaggtctcagattcgaacccgggtcacgacgtctgaccttgcaattttgac 7059496  T
Q  272 atttgtcc 279  Q
    ||||||||    
T  7059495 atttgtcc 7059488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 46447364 - 46447481
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataa----actcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggcc 258  Q
    ||||| || ||||||||||| |||||||||||||||||||||    ||||||||| |||| ||||||| |||||||||||||||||  | |||||  |||    
T  46447364 tttttttttgtcttagatgatgtggtaatccactgaaaataattaaactcacacataactgtgaggtcccgggttcgaacccgggttacgacgtcgagcc 46447463  T
Q  259 ttgcaatttcggcatttg 276  Q
    ||||||||||||||||||    
T  46447464 ttgcaatttcggcatttg 46447481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 164 - 278
Target Start/End: Complemental strand, 26032937 - 26032820
Alignment:
Q  164 ttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgt---ccggcctt 260  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||| |||| ||||||  | |||||||||||||||| | ||||   ||| ||||    
T  26032937 tttttttggtcttagatgaagcggtaatccactgaaattaaactcacacaaaactgtgaggttccaggttcgaacccgggtcacgacgtccgccgacctt 26032838  T
Q  261 gcaatttcggcatttgtc 278  Q
     |||||||||||||||||    
T  26032837 acaatttcggcatttgtc 26032820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 11688511 - 11688449
Alignment:
Q  19 atataccctcattaatattttattttctttttatattccaatgaagcttttcatttacggttg 81  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  11688511 atataccctcattaatattttattttctttttatattctaatgaagcttttcatgtacggttg 11688449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 278
Target Start/End: Complemental strand, 4066091 - 4065983
Alignment:
Q  170 tggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcg 269  Q
    |||||||||||||||||||||| |||||||| |||||||||| |||| | | ||||||| | ||||||||||| || |||||| | | ||||||||||||    
T  4066091 tggtcttagatgaagtggtaattcactgaaattaaactcacatacaattgtaaggtctcagattcgaacccggatcacaacgttcagtcttgcaatttcg 4065992  T
Q  270 gcatttgtc 278  Q
    | |||||||    
T  4065991 gtatttgtc 4065983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 163 - 267
Target Start/End: Complemental strand, 13109907 - 13109803
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    ||||||||  |||||  | ||||||| ||||||    
T  13109907 tttttttttgtcttagatgaagtggtaatccactgaaattaaactcacacacaactgtgaggttctaggttcgaattcgggttacgacgtccgaccttgc 13109808  T
Q  263 aattt 267  Q
    |||||    
T  13109807 aattt 13109803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 7275806 - 7275705
Alignment:
Q  175 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 274  Q
    |||||||||||||||| ||||||||| |||||||| |||||||| ||| ||  |||||||||| ||| |||  |||||||| |||| |||||||| ||||    
T  7275806 ttagatgaagtggtaaaccactgaaattaaactcatacacaactgtgaagttccgggttcgaatccgagtcataacgtccgaccttacaatttcgacatt 7275707  T
Q  275 tg 276  Q
    ||    
T  7275706 tg 7275705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 35110099 - 35110172
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtc 245  Q
    |||||||||||||||||||||| || ||| ||||||||||||||||| | |||||  |||||||||||||||||    
T  35110099 gtcttagatgaagtggtaatcctctcaaattaaactcacacacaactgtaaggtcctgggttcgaacccgggtc 35110172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 276
Target Start/End: Complemental strand, 29587344 - 29587276
Alignment:
Q  208 cacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 276  Q
    ||||||||| | ||||||| ||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  29587344 cacacacaattgtgaggtcccgggttcgaacccaggtcacgacgtccggccttgcaatttcggcatttg 29587276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 276
Target Start/End: Complemental strand, 49783835 - 49783731
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||||||||||||| ||||||||| |||| ||||| |||||| ||||||  ||||||||||||||  ||   |||| || ||||||||||||| |    
T  49783835 gtcttagatgaagtggtaaaccactgaaattaaattcacatacaactgtgaggttccgggttcgaacccgaatcatgacgttcgaccttgcaatttcgac 49783736  T
Q  272 atttg 276  Q
    |||||    
T  49783735 atttg 49783731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 3716499 - 3716424
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaac 238  Q
    ||||| || |||| ||||||||||  |||||||| ||||||||||||||||||||| ||||||||| |||||||||    
T  3716499 tttttttttgtctaagatgaagtgacaatccactaaaaataaactcacacacaactgtgaggtctcaggttcgaac 3716424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 275
Target Start/End: Complemental strand, 21939069 - 21938967
Alignment:
Q  173 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 272  Q
    |||||||||||||||||| || |||||| ||||||| ||||||||| |||||||  || |||||| |||| ||   || ||||||||| |||||||||||    
T  21939069 tcttagatgaagtggtaaaccgctgaaattaaactcgcacacaactgtgaggtcctggattcgaatccggatcatgacatccggccttacaatttcggca 21938970  T
Q  273 ttt 275  Q
    |||    
T  21938969 ttt 21938967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 265
Target Start/End: Complemental strand, 13097432 - 13097339
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaat 265  Q
    ||||||||||||||||||||||| | ||| |||||||||| |||||| ||||||    |||| ||| ||||||| | ||||||| |||||||||    
T  13097432 gtcttagatgaagtggtaatccaataaaattaaactcacatacaactgtgaggttctaggtttgaatccgggtcacgacgtccgaccttgcaat 13097339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 26264537 - 26264601
Alignment:
Q  173 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaa 237  Q
    |||||||||||||| |||| || ||||| ||||||||||||||||| |||||| || ||||||||    
T  26264537 tcttagatgaagtgataatacattgaaattaaactcacacacaactgtgaggtttcaggttcgaa 26264601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 778702 - 778635
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacc 239  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||| | |||||   ||||||||||    
T  778702 gtcttagatgaattggtaattcactgaaattaaactcacacacaactgtcaggtcctaggttcgaacc 778635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 278
Target Start/End: Original strand, 38817190 - 38817305
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||| || |||||| | | | ||| |||| |||||||||| | ||||||||||||||||||| ||| || | |||||||| ||| |    
T  38817190 tttttttttgtcttagataaaatggtaaacaattaaaattaaattcacacacaattgtgaggtctcgggttcgaactcggatcacgacgtccggtctttc 38817289  T
Q  263 aatttcggcatttgtc 278  Q
    ||| ||| ||||||||    
T  38817290 aatatcgacatttgtc 38817305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 268
Target Start/End: Complemental strand, 39284421 - 39284322
Alignment:
Q  169 ttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttc 268  Q
    ||||| ||||||||| | |||||||||  ||| |||||||||| |||||| ||||||||  ||||||||||||  || | ||||||| |||| |||||||    
T  39284421 ttggttttagatgaaatagtaatccacaaaaattaaactcacatacaactgtgaggtcttaggttcgaacccgaatcacgacgtccgaccttacaatttc 39284322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 13183179 - 13183222
Alignment:
Q  175 ttagatgaagtggtaatccactgaaaataaactcacacacaact 218  Q
    ||||||||||||||||| |||||||| |||||||||| ||||||    
T  13183179 ttagatgaagtggtaattcactgaaattaaactcacatacaact 13183222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 2088908 - 2088974
Alignment:
Q  175 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccg 241  Q
    |||||||||||||||||||||||||| | |||||||| |||| | ||||||   | |||||||||||    
T  2088908 ttagatgaagtggtaatccactgaaattgaactcacatacaattgtgaggttctgagttcgaacccg 2088974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 227
Target Start/End: Original strand, 9886889 - 9886947
Alignment:
Q  169 ttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtct 227  Q
    ||||||||||||||||||||||| || ||| | |||||||||||| |||| | ||||||    
T  9886889 ttggtcttagatgaagtggtaattcagtgatattaaactcacacataactgttaggtct 9886947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 25931147 - 25931201
Alignment:
Q  162 atttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaa 216  Q
    |||||| || |||| |||||||||||||||| | ||||| |||||||||||||||    
T  25931147 atttttttttgtctcagatgaagtggtaatctattgaaattaaactcacacacaa 25931201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 275
Target Start/End: Original strand, 32982351 - 32982453
Alignment:
Q  173 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 272  Q
    ||||||||||||| |||| |||||||||  |||||||||||||||| |||  |||| |||| |||  ||||||  || ||  |||||| || ||||||||    
T  32982351 tcttagatgaagtagtaaaccactgaaatcaaactcacacacaactgtgatttctcaggtttgaattcgggtcataaagtttggccttacagtttcggca 32982450  T
Q  273 ttt 275  Q
    |||    
T  32982451 ttt 32982453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 35224430 - 35224364
Alignment:
Q  210 cacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 276  Q
    ||||||||| |||||||  |||||||||||||||||   ||||||||||||||| |||  |||||||    
T  35224430 cacacaactgtgaggtcctgggttcgaacccgggtcatgacgtccggccttgcatttttcgcatttg 35224364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 16770177 - 16770210
Alignment:
Q  193 cactgaaaataaactcacacacaactctgaggtc 226  Q
    |||||||||||||||||||||||||| |||||||    
T  16770177 cactgaaaataaactcacacacaactgtgaggtc 16770210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 47111528 - 47111479
Alignment:
Q  229 gggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 278  Q
    |||||| ||||| |||| | ||||||| ||||||||||||||||||||||    
T  47111528 gggttcaaacccaggtcacgacgtccgaccttgcaatttcggcatttgtc 47111479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 5e-47; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 163 - 278
Target Start/End: Complemental strand, 45874192 - 45874077
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  45874192 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgc 45874093  T
Q  263 aatttcggcatttgtc 278  Q
    ||||| ||||||||||    
T  45874092 aattttggcatttgtc 45874077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 34739417 - 34739304
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  34739417 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 34739318  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  34739317 aatttcggcatttg 34739304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 23417474 - 23417587
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | | ||| |||||||||||||||||| ||||||||||||||||    
T  23417474 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaagtcccgggttcgaacccgggtcacaacgtccggccttgc 23417573  T
Q  263 aatttcggcatttg 276  Q
    ||||| ||||||||    
T  23417574 aattttggcatttg 23417587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 28798379 - 28798492
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||| | ||||||||||||||    
T  28798379 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggtcccgggttcgaacccgggtcacgacgtccggccttgc 28798478  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  28798479 aatttcggcatttg 28798492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 43139897 - 43140010
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  43139897 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 43139996  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  43139997 aatttcggcatttg 43140010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 163 - 278
Target Start/End: Complemental strand, 12735568 - 12735453
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||||||| |||||| |    
T  12735568 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtctggccttac 12735469  T
Q  263 aatttcggcatttgtc 278  Q
    ||||| ||||||||||    
T  12735468 aattttggcatttgtc 12735453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 1174088 - 1173975
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||   ||||||||||||||    
T  1174088 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatgacgtccggccttgc 1173989  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  1173988 aatttcggcatttg 1173975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 19849494 - 19849607
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||||||||||| || | ||||||||||||||    
T  19849494 ttttttttggtcttagatgaagtggtaaaccattgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacgacgtccggccttgc 19849593  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  19849594 aatttcggcatttg 19849607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 26424849 - 26424961
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   |||||| |||||||    
T  26424849 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtcc-gccttgc 26424947  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  26424948 aatttcggcatttg 26424961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 53457961 - 53457848
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||   ||||||| ||||||    
T  53457961 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccggattcgaacccgggtcatgacgtccgaccttgc 53457862  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  53457861 aatttcggcatttg 53457848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 54768423 - 54768536
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||  |||||||||||||||||   ||||||||||||||    
T  54768423 ttttttttggtcttagatgaagtggtaatccactgaaaaaaaactcgcacacaactgtgaggtcctgggttcgaacccgggtcatgacgtccggccttgc 54768522  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  54768523 aatttcggcatttg 54768536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 173 - 276
Target Start/End: Complemental strand, 55214779 - 55214676
Alignment:
Q  173 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 272  Q
    |||||||| |||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| ||||    
T  55214779 tcttagataaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaattttggca 55214680  T
Q  273 tttg 276  Q
    ||||    
T  55214679 tttg 55214676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 12867978 - 12867865
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||| || | ||||||||| |||||| | ||||||| ||||||    
T  12867978 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcactcacaactgtgagatcccaggttcgaactcgggtcacgacgtccgaccttgc 12867879  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  12867878 aatttcggcatttg 12867865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 18257466 - 18257353
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||||| ||   ||||||||||||||    
T  18257466 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacgcacaactgtgaggtcccgggctcgaacccggatcatgacgtccggccttgc 18257367  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  18257366 aatttcggcatttg 18257353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 163 - 273
Target Start/End: Original strand, 29581035 - 29581144
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||  |||| | ||||||||||||||    
T  29581035 tttttttttgtcttagatgaagtggtaatccact-aaattaaactcacacacaactgtgaggtctcgggttcgaacctaggtcacgacgtccggccttgc 29581133  T
Q  263 aatttcggcat 273  Q
    |||||||||||    
T  29581134 aatttcggcat 29581144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 171 - 276
Target Start/End: Original strand, 238457 - 238562
Alignment:
Q  171 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcgg 270  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||    ||||| |||||||||||||||    
T  238457 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccagccttgcaatttcgg 238556  T
Q  271 catttg 276  Q
    ||||||    
T  238557 catttg 238562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 163 - 278
Target Start/End: Complemental strand, 22608122 - 22608007
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || |||| ||||||||| |||||||| ||||| |||||||| |||||||| ||||||| |||||||||||||||||| | ||||||||||||||    
T  22608122 tttttttttgtctcagatgaagtagtaatccattgaaattaaactcagacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgc 22608023  T
Q  263 aatttcggcatttgtc 278  Q
    ||||||| ||| ||||    
T  22608022 aatttcgacatctgtc 22608007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 172 - 275
Target Start/End: Complemental strand, 55400356 - 55400253
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||  || ||||||| |||| ||   |||||||||||||||||||||||    
T  55400356 gtcttagatgaagtggtaatccactgaaaataaactcacatacaactatgaggttccgagttcgaatccggatcatgacgtccggccttgcaatttcggc 55400257  T
Q  272 attt 275  Q
    ||||    
T  55400256 attt 55400253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 39807963 - 39807869
Alignment:
Q  181 gaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 275  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||| || |||||||| |||||| | | ||| |||||||||||||||||||||    
T  39807963 gaagtggtaatccactgaaattaaactcacacacaactgtgaggtcccgagttcgaactcgggtcacgatgtctggccttgcaatttcggcattt 39807869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 19225396 - 19225283
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||| ||||||||| ||||||||| ||||| | ||||||| ||||||||||||||| ||   ||||||||| || |    
T  19225396 tttttttttgtcttagatgaagtggtaaaccactgaaactaaactcacgcacaattgtgaggtcccgggttcgaacccggatcatgacgtccggctttac 19225297  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  19225296 aatttcggcatttg 19225283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 19673920 - 19674025
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || |||||| |||||||||||||||||||||| ||||||| |||| || | ||||||| ||||||||||||| |||| |||||| |||||||||    
T  19673920 tttttttttgtcttaaatgaagtggtaatccactgaaattaaactcgcacataattgtgaggtcccgggttcgaacccaggtcacaacgttcggccttgc 19674019  T
Q  263 aatttc 268  Q
    ||||||    
T  19674020 aatttc 19674025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 11278115 - 11278006
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||||    ||| ||||||| |||||| |||||||||||   | ||||||||||||    
T  11278115 ttttttttggtcttagatgaagtggtaaaccactgaaattaaactcaca----actgtgaggtcccgggtttgaacccgggtcatgatgtccggccttgc 11278020  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  11278019 aatttcggcatttg 11278006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 23710337 - 23710436
Alignment:
Q  176 tagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 275  Q
    ||||||||||||||||||||||||| |||||||||||  |||| ||||||  | |||||||| ||||||| | ||||||||||||||||||||| |||||    
T  23710337 tagatgaagtggtaatccactgaaattaaactcacacgtaactgtgaggttccaggttcgaatccgggtcacgacgtccggccttgcaatttcgacattt 23710436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 276
Target Start/End: Original strand, 2864738 - 2864852
Alignment:
Q  162 atttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttg 261  Q
    |||||| || || |||||||||||||||| ||  ||||| ||| ||||||||||||||||||||    |||||||||||||||| | |||||| ||||||    
T  2864738 atttttttttgtgttagatgaagtggtaaacctttgaaattaagctcacacacaactctgaggttctaggttcgaacccgggtcacgacgtcccgccttg 2864837  T
Q  262 caatttcggcatttg 276  Q
    |||||| ||||||||    
T  2864838 caatttaggcatttg 2864852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 50033519 - 50033405
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtcc-ggccttg 261  Q
    ||||| || |||||| ||||||||||||| || ||||| |||||| |||||||||| ||| |||||  ||||||||||||||| |||||||| | | |||    
T  50033519 tttttttttgtcttatatgaagtggtaattcattgaaattaaacttacacacaactgtgatgtctcatgttcgaacccgggtcacaacgtccagtctttg 50033420  T
Q  262 caatttcggcatttg 276  Q
    |||||||||||||||    
T  50033419 caatttcggcatttg 50033405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 19814242 - 19814129
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||| ||||||||||||||||| ||||||| |||||||||||| || | ||||||| | |||| |||||| |||| | |||||||||||| |    
T  19814242 tttttttttgtcatagatgaagtggtaatcaactgaaattaaactcacacataattgtgaggtcccaggtttgaacccaggtcacgacgtccggccttac 19814143  T
Q  263 aatttcggcatttg 276  Q
    |||||| |||||||    
T  19814142 aatttctgcatttg 19814129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 24417869 - 24417974
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||| || |||||||||||||||| ||| ||||||||  ||||||| ||||||||||| |||||||||||||| | |||||  |||||||    
T  24417869 tttttttttgtcttggaagaagtggtaatccactaaaattaaactcatccacaactgtgaggtctcggattcgaacccgggtcacgacgtcgtgccttgc 24417968  T
Q  263 aatttc 268  Q
    ||||||    
T  24417969 aatttc 24417974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 24517972 - 24518089
Alignment:
Q  161 tatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggcctt 260  Q
    ||||||| || |||| |||| |||||||||| || | ||| |||||||||||| || | |||| | |||||||||||| |||||| |||||||||| |||    
T  24517972 tatttttttttgtctgagattaagtggtaattcattaaaattaaactcacacataattgtgagatttcgggttcgaacacgggtcacaacgtccggtctt 24518071  T
Q  261 gcaatttcggcatttgtc 278  Q
     ||||||| |||||||||    
T  24518072 acaatttcagcatttgtc 24518089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 33770708 - 33770628
Alignment:
Q  159 tatatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaaccc 240  Q
    ||||||||| ||| |||||||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| |||||||||||||    
T  33770708 tatattttttttg-tcttagatgaagcggtaaaccactgaaattaaactcacacacaactatgaagtcccgggttcgaaccc 33770628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 49030754 - 49030842
Alignment:
Q  187 gtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 276  Q
    |||||||||||||  ||||||||||||||||| |||||| || ||||||||| ||| || | ||||||||||||||||||||| ||||||    
T  49030754 gtaatccactgaagttaaactcacacacaactatgaggt-tccggttcgaactcggatcacgacgtccggccttgcaatttcgacatttg 49030842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 1966687 - 1966611
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacc 239  Q
    ||||| || |||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||  ||||||||    
T  1966687 tttttttttgtcttagatgaagttgtaatccactgaaattaaactcacacacaactgtgaggtcccgaattcgaacc 1966611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 278
Target Start/End: Complemental strand, 32778238 - 32778147
Alignment:
Q  185 tggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 278  Q
    |||||||||||| ||||||||||||||||  | | |||||||||| |||||||||||| || | ||||||| ||||||||||| || |||||||    
T  32778238 tggtaatccactaaaaataaactcacaca--attgtgaggtctcgtgttcgaacccggatcacgacgtccgaccttgcaattttggtatttgtc 32778147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 276
Target Start/End: Complemental strand, 37134166 - 37134072
Alignment:
Q  182 aagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 276  Q
    ||||||||| ||||||||| ||||||||||||||||| ||| || |||||||||||||||| ||   || |||| ||||| |||||| |||||||    
T  37134166 aagtggtaaaccactgaaattaaactcacacacaactgtgaagtttcgggttcgaacccggatcatgacatccgaccttgtaatttcagcatttg 37134072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 278
Target Start/End: Complemental strand, 51287739 - 51287623
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaa-ctcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttg 261  Q
    ||||| || |||||||||||| ||||||| |||||||| |||| ||||||||||||| |||||| |||||||  ||||| | || | ||||| | ||||     
T  51287739 tttttttttgtcttagatgaaatggtaattcactgaaattaaaactcacacacaactgtgaggtttcgggtttaaacccagatcacgacgtctgacctta 51287640  T
Q  262 caatttcggcatttgtc 278  Q
    |||||| ||||||||||    
T  51287639 caattttggcatttgtc 51287623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 516457 - 516551
Alignment:
Q  173 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaattt 267  Q
    ||||||||||||  ||||||||| |||||||||||||||||||| | |||| ||  |||||| ||| || ||| ||||||||  |||||||||||    
T  516457 tcttagatgaagctgtaatccaccgaaaataaactcacacacaattgtgagatcctgggttcaaactcgagtcacaacgtccaaccttgcaattt 516551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 278
Target Start/End: Complemental strand, 2804647 - 2804544
Alignment:
Q  173 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 272  Q
    ||||| |||||||||||||||||| ||| |||||||||| | ||||   |||||   |||||||||||||||| ||||||||| |||| ||||||  |||    
T  2804647 tcttaaatgaagtggtaatccacttaaattaaactcacataaaacta--aggtcctaggttcgaacccgggtcacaacgtccgaccttacaattttagca 2804550  T
Q  273 tttgtc 278  Q
    ||||||    
T  2804549 tttgtc 2804544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 275
Target Start/End: Complemental strand, 12767214 - 12767112
Alignment:
Q  173 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 272  Q
    ||||||||||||  |||| ||| ||||| ||||||||||||||||| |||||| |||| ||||||||| | ||   |||||||  ||| |||||||||||    
T  12767214 tcttagatgaagcagtaaaccagtgaaattaaactcacacacaactgtgaggtttcggattcgaacccagatcatgacgtccgatcttacaatttcggca 12767115  T
Q  273 ttt 275  Q
    |||    
T  12767114 ttt 12767112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 22910269 - 22910363
Alignment:
Q  184 gtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 278  Q
    ||||||||| | ||||| |||||| | |||||||| |||| || | |||||||||||||||| | ||||||| ||||||||||||| | ||||||    
T  22910269 gtggtaatctattgaaattaaacttagacacaactgtgagatcccaggttcgaacccgggtcacgacgtccgaccttgcaatttcgacttttgtc 22910363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 22968253 - 22968159
Alignment:
Q  184 gtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 278  Q
    ||||||||| | ||||| |||||| | |||||||| |||| || | |||||||||||||||| | ||||||| ||||||||||||| | ||||||    
T  22968253 gtggtaatctattgaaattaaacttagacacaactgtgagatcccaggttcgaacccgggtcacgacgtccgaccttgcaatttcgacttttgtc 22968159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 31015119 - 31015057
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggt 225  Q
    ||||| || |||||||||||||||||||  |||||||| ||||||||||||||||| ||||||    
T  31015119 tttttttttgtcttagatgaagtggtaaagcactgaaattaaactcacacacaactgtgaggt 31015057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 52171981 - 52172043
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggt 225  Q
    ||||| ||||||||| || ||||||||||||||||||| ||||||||||||||| | ||||||    
T  52171981 ttttttttggtcttaaataaagtggtaatccactgaaattaaactcacacacaattgtgaggt 52172043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 37620753 - 37620677
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaaccc 240  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||||||| | || |||  || |||||||||||||    
T  37620753 tttttgttg-tctttgatgaagtggtaatccactgaaattaaactcacacaaacctgtgatatcccgggttcgaaccc 37620677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 52768292 - 52768404
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||||||||||||||| |||||||||| ||||| ||||||||||||||||| |||| ||   ||||||||  ||  || | ||||||| ||||||    
T  52768292 ttttttttggtcttagatgaa-tggtaatccattgaaattaaactcacacacaactgtgagatccttggttcgaattcgaatcacgacgtccgaccttgc 52768390  T
Q  263 aatttcggcatttg 276  Q
    | |||| |||||||    
T  52768391 agtttcagcatttg 52768404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 50347320 - 50347372
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacaca 215  Q
    ||||| || ||||||||||| ||||||||||||||||| ||||||||||||||    
T  50347320 tttttttttgtcttagatgaggtggtaatccactgaaattaaactcacacaca 50347372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 3465842 - 3465783
Alignment:
Q  210 cacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcg 269  Q
    ||||||||| ||||||| || ||||||||| || || |||||||||||||||||||||||    
T  3465842 cacacaactatgaggtcccgagttcgaacctggatcacaacgtccggccttgcaatttcg 3465783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 2075642 - 2075565
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaaccc 240  Q
    ||||| || ||||||||| ||||| |||  || ||||| |||||||||||| |||| ||||||| |||||||||||||    
T  2075642 tttttttttgtcttagataaagtgataaatcattgaaattaaactcacacataactgtgaggtcccgggttcgaaccc 2075565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 276
Target Start/End: Original strand, 32441119 - 32441188
Alignment:
Q  207 tcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 276  Q
    |||| ||||||| ||||||| ||||||||||||||||||   | ||| ||||||||||||||| ||||||    
T  32441119 tcacgcacaactgtgaggtcccgggttcgaacccgggtcatgatgtctggccttgcaatttcgacatttg 32441188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 23532172 - 23532129
Alignment:
Q  175 ttagatgaagtggtaatccactgaaaataaactcacacacaact 218  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||    
T  23532172 ttagaagaagtggtaattcactgaaattaaactcacacacaact 23532129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 16555444 - 16555382
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggt 225  Q
    ||||| || |||||||||||||||||||| || | ||| |||| |||||||||||| ||||||    
T  16555444 ttttttttcgtcttagatgaagtggtaattcattaaaattaaattcacacacaactgtgaggt 16555382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 48822940 - 48822890
Alignment:
Q  173 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgag 223  Q
    ||||| |||||||||||||| | ||||| ||||||||||||||||| ||||    
T  48822940 tcttaaatgaagtggtaatctattgaaattaaactcacacacaactgtgag 48822890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 1126014 - 1125953
Alignment:
Q  173 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttc 234  Q
    |||||||||||||||||||  | ||||| |||||||| |||||||| |||| ||| ||||||    
T  1126014 tcttagatgaagtggtaatttattgaaattaaactcatacacaactgtgagatcttgggttc 1125953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 278
Target Start/End: Original strand, 16342826 - 16342855
Alignment:
Q  249 acgtccggccttgcaatttcggcatttgtc 278  Q
    ||||||||||||||||||||||||||||||    
T  16342826 acgtccggccttgcaatttcggcatttgtc 16342855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 16887581 - 16887657
Alignment:
Q  202 taaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 278  Q
    |||||||||||| |||| ||| |||||| ||| |||||| | || | ||||||||| ||| |||||| |||||||||    
T  16887581 taaactcacacataactgtgaagtctcgagtttgaacccagatcacgacgtccggctttgtaatttctgcatttgtc 16887657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 19119258 - 19119214
Alignment:
Q  171 ggtcttagatgaagtggtaatccactgaaaataaactcacacaca 215  Q
    ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  19119258 ggtcttagatggagtagtaaaccactgaaattaaactcacacaca 19119214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 56618 - 56505
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||||    
T  56618 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccgaccttgc 56519  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  56518 aatttcggcatttg 56505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 7e-46; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 26605761 - 26605648
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  26605761 ttttttttggtcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgc 26605662  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  26605661 aatttcggcatttg 26605648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 163 - 278
Target Start/End: Complemental strand, 34460506 - 34460391
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   ||||||||||||||||| ||||||||||||||||    
T  34460506 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttctgggttcgaacccgggtcacaacgtccggccttgc 34460407  T
Q  263 aatttcggcatttgtc 278  Q
    ||||||||||||||||    
T  34460406 aatttcggcatttgtc 34460391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 10639597 - 10639710
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  10639597 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 10639696  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  10639697 aatttcggcatttg 10639710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 37197601 - 37197714
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| | |||||| |||||||    
T  37197601 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccagccttgc 37197700  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  37197701 aatttcggcatttg 37197714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 161 - 276
Target Start/End: Complemental strand, 19537446 - 19537331
Alignment:
Q  161 tatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggcctt 260  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||  ||||||||||||||| || ||||||||||||||    
T  19537446 tattttttttggtcttagatgaagtggtaatccactgaaaataaacacacacacaactgtgaggttccgggttcgaacccggatcacaacgtccggcctt 19537347  T
Q  261 gcaatttcggcatttg 276  Q
    ||||||||||||||||    
T  19537346 gcaatttcggcatttg 19537331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 33083545 - 33083658
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  33083545 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 33083644  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  33083645 aatttcggcatttg 33083658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 11708815 - 11708702
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||  ||||||||||||||||| |||||||||||||| |    
T  11708815 ttttttttggtattagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtccggccttac 11708716  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  11708715 aatttcggcatttg 11708702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 23839996 - 23839883
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||| |||| ||||||||||||||||    
T  23839996 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccaggttcgaacccaggtcacaacgtccggccttgc 23839897  T
Q  263 aatttcggcatttg 276  Q
    ||||| ||||||||    
T  23839896 aattttggcatttg 23839883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 11459852 - 11459739
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||||||||||||   ||||||| ||||||    
T  11459852 ttttttttggtcttagatgaagtggtaatccattgaaaataaacacacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccgaccttgc 11459753  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  11459752 aatttcggcatttg 11459739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 45125156 - 45125269
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  || ||||||||||  ||| |||||||||||||| |    
T  45125156 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttccgagttcgaacccaagtcacaacgtccggccttac 45125255  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  45125256 aatttcggcatttg 45125269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 161 - 276
Target Start/End: Original strand, 29659207 - 29659322
Alignment:
Q  161 tatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggcctt 260  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| || |||||||    
T  29659207 tatttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcatgggttcgaacccgggtcacaatgttcggcctt 29659306  T
Q  261 gcaatttcggcatttg 276  Q
     |||||| ||||||||    
T  29659307 acaattttggcatttg 29659322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 162 - 276
Target Start/End: Complemental strand, 19816358 - 19816244
Alignment:
Q  162 atttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttg 261  Q
    |||||| ||||||||||||||||| |||||| |||||||||||||||| ||||||||  |||||  ||||||| |||||||||| |||||||||||||||    
T  19816358 attttttttggtcttagatgaagttgtaatctactgaaaataaactcatacacaactgcgaggttccgggttcaaacccgggtcacaacgtccggccttg 19816259  T
Q  262 caatttcggcatttg 276  Q
    ||||||||| |||||    
T  19816258 caatttcggtatttg 19816244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 159 - 276
Target Start/End: Original strand, 11816538 - 11816655
Alignment:
Q  159 tatatttttgttggtcttagatgaagtggtaatccactgaaaataaa-ctcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggc 257  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||| |||||| ||||||  ||||||||||||| |||| | ||||||| |    
T  11816538 tatattttt-ttggtcttagatgaagtggtaatccactgaaattaaaactcacatacaactgtgaggttccgggttcgaacccaggtcacgacgtccgac 11816636  T
Q  258 cttgcaatttcggcatttg 276  Q
    |||||||||||||||||||    
T  11816637 cttgcaatttcggcatttg 11816655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 19048891 - 19048778
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||| ||||||||||||||| ||   |||||||||||| |    
T  19048891 tttttttttgtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttac 19048792  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  19048791 aatttcggcatttg 19048778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 39535525 - 39535638
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || |||||||||||||||||||||| || ||| |||||||||| | |||| ||||||| |||||||||||||||||| | ||||||||||||||    
T  39535525 tttttttttgtcttagatgaagtggtaatccgctcaaattaaactcacataaaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgc 39535624  T
Q  263 aatttcggcatttg 276  Q
    ||||||| ||||||    
T  39535625 aatttcgacatttg 39535638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 38440197 - 38440303
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||||||||||||||||||| ||| |||||||||||| | ||  |||||||| |||||| | ||||||| | |||||||||||||||||||||||    
T  38440197 gtcttagatgaagtggtaatccactaaaattaaactcacacatagctaggaggtctcaggttcggatccgggtcacgacgtccggccttgcaatttcggc 38440296  T
Q  272 atttgtc 278  Q
    |||||||    
T  38440297 atttgtc 38440303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 169 - 272
Target Start/End: Complemental strand, 4851451 - 4851348
Alignment:
Q  169 ttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttc 268  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||| |||||||| || | ||||||||| || |||||||    
T  4851451 ttggtcttggatgaagtggtaatccactaaaattaaactcacacacaactgtgaggtcccgggtttgaacccggatcacgacgtccggctttacaatttc 4851352  T
Q  269 ggca 272  Q
    ||||    
T  4851351 ggca 4851348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 43778468 - 43778574
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||  ||||||||||| |||| | || | |||| ||||||||||||     
T  43778468 gtcttagatgaagtggtaatccaatgaaaataaactcacacacaactgtgaagtcttaggttcgaacccaggtcacgacattcggctttgcaatttcggt 43778567  T
Q  272 atttgtc 278  Q
    |||||||    
T  43778568 atttgtc 43778574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 39831435 - 39831547
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||| | ||||||||||||| ||   ||||||||||||||    
T  39831435 tttttttttgtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtc-ccggttcgaacccggatcatgacgtccggccttgc 39831533  T
Q  263 aatttcggcatttg 276  Q
    |||||||| |||||    
T  39831534 aatttcggtatttg 39831547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 163 - 275
Target Start/End: Original strand, 7275877 - 7275989
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||||||| | ||| |||| | |||||||||| ||||||| |||||||||||||||| | | || |||| ||||||    
T  7275877 tttttttttgtcttagatgaagtggtaatccattaaaattaaatttacacacaactgtgaggtcccgggttcgaacccgggccacgacatccgaccttgc 7275976  T
Q  263 aatttcggcattt 275  Q
    |||||||||||||    
T  7275977 aatttcggcattt 7275989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 174 - 278
Target Start/End: Complemental strand, 15782715 - 15782612
Alignment:
Q  174 cttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcat 273  Q
    ||||||||||||||||| ||||||||| ||||||| |||||| || | ||||||||||||||||||||||||   ||||||| |||| ||||||||||||    
T  15782715 cttagatgaagtggtaaaccactgaaattaaactcccacaca-ctgtaaggtctcgggttcgaacccgggtcatgacgtccgaccttacaatttcggcat 15782617  T
Q  274 ttgtc 278  Q
    |||||    
T  15782616 ttgtc 15782612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 278
Target Start/End: Original strand, 27137909 - 27138023
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| | |||| | ||||| ||||||||||||| |||| | | || ||||||| |    
T  27137909 ttttttttggtcttagatgaagtggtaatccactgaaattaaactcacataaaactgtaaggtcccgggttcgaacccaggtcacgatgttcggcctt-c 27138007  T
Q  263 aatttcggcatttgtc 278  Q
    |||||| |||||||||    
T  27138008 aatttcagcatttgtc 27138023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 275
Target Start/End: Complemental strand, 16654488 - 16654388
Alignment:
Q  175 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 274  Q
    |||||||||| || ||| |||| ||||||||||||||||||||| ||||||  ||||||||||| ||| || |  |||||||||||||||||||||||||    
T  16654488 ttagatgaaggggcaattcactaaaaataaactcacacacaactgtgaggttccgggttcgaactcggatcacggcgtccggccttgcaatttcggcatt 16654389  T
Q  275 t 275  Q
    |    
T  16654388 t 16654388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 276
Target Start/End: Complemental strand, 34234659 - 34234554
Alignment:
Q  169 ttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttc 268  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||  ||| ||||||||||||||| ||| | | || |||| |||| ||||||||||||    
T  34234659 ttggtcttagatgaagtggtgatctactgaaattaaactcacaca--actatgaggtctcgggttcaaactcagatcacaacatccgaccttgcaatttc 34234562  T
Q  269 ggcatttg 276  Q
    ||||||||    
T  34234561 ggcatttg 34234554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 175 - 278
Target Start/End: Original strand, 40786212 - 40786315
Alignment:
Q  175 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 274  Q
    ||||| |||||| |||| |||| ||| ||||||||||| |||||  |||||||  |||||||||| ||||| | ||||||||||||||||||||||||||    
T  40786212 ttagaagaagtgataattcactaaaattaaactcacactcaactgcgaggtcttaggttcgaaccagggtcacgacgtccggccttgcaatttcggcatt 40786311  T
Q  275 tgtc 278  Q
    ||||    
T  40786312 tgtc 40786315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 43684194 - 43684091
Alignment:
Q  175 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 274  Q
    |||||||||||||||||||| |||||||||||||||||| || | || |||| |||||||||||||  |||     ||||||||||||||||||||||||    
T  43684194 ttagatgaagtggtaatccagtgaaaataaactcacacataattgtggggtcccgggttcgaacccatgtcatggtgtccggccttgcaatttcggcatt 43684095  T
Q  275 tgtc 278  Q
    ||||    
T  43684094 tgtc 43684091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 42578296 - 42578243
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42578296 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggt 42578243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 7349223 - 7349122
Alignment:
Q  175 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 274  Q
    |||||||||||||| ||||||| ||| |||||||||||| |  | ||||||||||| ||||||| ||| || | ||||||||||||||||| || |||||    
T  7349223 ttagatgaagtggtgatccactaaaattaaactcacacatagttgtgaggtctcggattcgaactcggatcacgacgtccggccttgcaatatcagcatt 7349124  T
Q  275 tg 276  Q
    ||    
T  7349123 tg 7349122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 44181887 - 44181993
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||| |||| || ||| |||||| ||   || |||| | || |||| ||||||| ||    
T  44181887 gtcttagattaagtgataatccactgaaaataaactcacacacaactgtgagatcccggattcgaatccaaatcacaacattcgaccttacaatttcagc 44181986  T
Q  272 atttgtc 278  Q
    |||||||    
T  44181987 atttgtc 44181993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 4801001 - 4800900
Alignment:
Q  175 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 274  Q
    ||||||||||||||||| ||||| || |||||||||||| |||   |||||  ||||||||||| | |||| | |||||| |||||||||||||| ||||    
T  4801001 ttagatgaagtggtaattcactggaattaaactcacacataaccgcgaggttccgggttcgaactcaggtcacgacgtccagccttgcaatttcgacatt 4800902  T
Q  275 tg 276  Q
    ||    
T  4800901 tg 4800900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 278
Target Start/End: Complemental strand, 42025808 - 42025692
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataa-actcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttg 261  Q
    ||||| || |||||||||||||||||| |||||||||| ||| |||||||||||| | ||||||   |||||||||| | |||| | || |||||||||     
T  42025808 tttttttttgtcttagatgaagtggtagtccactgaaattaagactcacacacaattgtgaggttctgggttcgaactcaggtcacgacatccggcctta 42025709  T
Q  262 caatttcggcatttgtc 278  Q
     ||||||| ||||||||    
T  42025708 aaatttcgacatttgtc 42025692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 245
Target Start/End: Original strand, 40825161 - 40825231
Alignment:
Q  175 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtc 245  Q
    |||||||||||| ||||||| |||||||||||||||||||| ||   || |||||| ||||||||||||||    
T  40825161 ttagatgaagtgataatccattgaaaataaactcacacacacctggaagatctcggattcgaacccgggtc 40825231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 276
Target Start/End: Complemental strand, 21312331 - 21312229
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    |||||||||||||||||||| |||| ||||||||||||  ||||| | ||||||| | ||||||| ||| | || |||||||||| ||| |||||| | |    
T  21312331 gtcttagatgaagtggtaattcactaaaaataaactca--cacaattgtgaggtcccaggttcgatcccagatcacaacgtccggtcttacaattttgac 21312234  T
Q  272 atttg 276  Q
    |||||    
T  21312233 atttg 21312229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 33001839 - 33001762
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaaccc 240  Q
    ||||| || |||||||||||| |||||||||||||||| |||||||||| | |||| |||||||  | ||||||||||    
T  33001839 tttttttttgtcttagatgaaatggtaatccactgaaattaaactcacatataactgtgaggtcctgtgttcgaaccc 33001762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 15344966 - 15345016
Alignment:
Q  173 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgag 223  Q
    ||||| ||||| |||| |||||||||||||||| |||||||||||||||||    
T  15344966 tcttaaatgaaatggtgatccactgaaaataaattcacacacaactctgag 15345016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 6054991 - 6055111
Alignment:
Q  158 ttatatttttgttggtcttagatgaagt-ggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccgg 256  Q
    |||| ||||||||| |||||||| |||| ||||||||||| ||| |||||||||||||| || |||||||  | ||||||| |||  |  | |||| ||     
T  6054991 ttatttttttgttg-tcttagataaagtaggtaatccactaaaattaaactcacacacagctatgaggtcctgagttcgaatccgaattacgacgttcga 6055089  T
Q  257 ccttgcaatttcggcatttgtc 278  Q
    ||||||||||| ||||||||||    
T  6055090 ccttgcaattttggcatttgtc 6055111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 275
Target Start/End: Original strand, 33564900 - 33565010
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||||| |||||| || | |||| ||| ||||| ||||||||||||  ||| | ||||||||||||||||||  |||| | |||||| ||||| |    
T  33564900 ttttttttggttttagattaaatagtaagccattgaaattaaactcacaca--actataaggtctcgggttcgaacctaggtcacgacgtccagccttac 33564997  T
Q  263 aatttcggcattt 275  Q
    ||||||| |||||    
T  33564998 aatttcgacattt 33565010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 275
Target Start/End: Complemental strand, 38400567 - 38400494
Alignment:
Q  202 taaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 275  Q
    ||||||| ||||||||| |||||||  || ||||||||| |||| | |||||||  ||||||||||||||||||    
T  38400567 taaactcgcacacaactatgaggtcctggattcgaaccctggtcacgacgtccgatcttgcaatttcggcattt 38400494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 278
Target Start/End: Complemental strand, 15072204 - 15072115
Alignment:
Q  188 taatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 278  Q
    ||||||||||||| ||||| ||||||||| | ||||||| |||||||||| |||| || | || ||| || |||||||||||  |||||||    
T  15072204 taatccactgaaattaaacacacacacaa-tatgaggtcccgggttcgaatccggatcacgacatccagctttgcaatttcgatatttgtc 15072115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 20497592 - 20497657
Alignment:
Q  174 cttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacc 239  Q
    ||||||||||||||||| |||||||||  ||||||||| |||| | ||||||  |||||| |||||    
T  20497592 cttagatgaagtggtaaaccactgaaataaaactcacatacaattgtgaggttccgggtttgaacc 20497657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 34239811 - 34239924
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || |||||| |||||||||||||  | ||||| |||||||| |||||||| | ||||   | |||||||| || ||| | ||||| | |||| |    
T  34239811 tttttttttgtcttaaatgaagtggtaatttattgaaattaaactcatacacaactgtaaggttctgagttcgaactcgagtcacgacgtctgaccttac 34239910  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  34239911 aatttcggcatttg 34239924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 25501839 - 25501887
Alignment:
Q  228 cgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 276  Q
    ||||||||||||  |||| | |||||||||||||||||||| |||||||    
T  25501839 cgggttcgaacctaggtcacgacgtccggccttgcaatttcagcatttg 25501887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 34093363 - 34093259
Alignment:
Q  175 ttagatgaagtggtaa-tccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcat 273  Q
    |||||||||||||||| |||||||||| |||||||| ||| |  | ||| |||||||||| ||| | || || ||||||||| ||||  ||||| | |||    
T  34093363 ttagatgaagtggtaagtccactgaaattaaactcatacatatttgtgatgtctcgggtttgaatctggatcacaacgtccgaccttaaaattttgacat 34093264  T
Q  274 ttgtc 278  Q
    |||||    
T  34093263 ttgtc 34093259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 41780473 - 41780417
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatcc-actgaaaataaactcacacacaact 218  Q
    ||||| || ||||||||||||| |||||||| ||||||| ||||| |||||||||||    
T  41780473 tttttttttgtcttagatgaagcggtaatcccactgaaattaaacccacacacaact 41780417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 3e-45; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 163 - 275
Target Start/End: Complemental strand, 2146773 - 2146661
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||    
T  2146773 ttttttttggtcttagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcttgggttcgaacccgggtcacaacgtccggccttgc 2146674  T
Q  263 aatttcggcattt 275  Q
    |||||||||||||    
T  2146673 aatttcggcattt 2146661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 158 - 276
Target Start/End: Complemental strand, 23358327 - 23358209
Alignment:
Q  158 ttatatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggc 257  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||  | |||||||||    
T  23358327 ttatattttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggttacgacgtccggc 23358228  T
Q  258 cttgcaatttcggcatttg 276  Q
    ||||||||||||| |||||    
T  23358227 cttgcaatttcggtatttg 23358209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 4106875 - 4106762
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  4106875 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 4106776  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  4106775 aatttcggcatttg 4106762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 40058375 - 40058262
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  40058375 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgc 40058276  T
Q  263 aatttcggcatttg 276  Q
    ||||| ||||||||    
T  40058275 aattttggcatttg 40058262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 44084077 - 44083964
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  44084077 ttttttttggttttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgc 44083978  T
Q  263 aatttcggcatttg 276  Q
    ||||| ||||||||    
T  44083977 aattttggcatttg 44083964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 4107446 - 4107333
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  4107446 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcgtgacgtccggccttgc 4107347  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  4107346 aatttcggcatttg 4107333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 31770523 - 31770636
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   || |||||||||||    
T  31770523 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacatccggccttgc 31770622  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  31770623 aatttcggcatttg 31770636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 158 - 271
Target Start/End: Original strand, 47570704 - 47570817
Alignment:
Q  158 ttatatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggc 257  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||   |||||||||    
T  47570704 ttattttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcatgacgtccggc 47570803  T
Q  258 cttgcaatttcggc 271  Q
    ||||||||||||||    
T  47570804 cttgcaatttcggc 47570817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 47250242 - 47250355
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| || | ||||||||||||||||   ||||||||||||||    
T  47250242 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactaagagatcccaggttcgaacccgggtcatgacgtccggccttgc 47250341  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  47250342 aatttcggcatttg 47250355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 163 - 275
Target Start/End: Original strand, 25546266 - 25546378
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||||   ||||||||||||||    
T  25546266 ttttttttggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccggattcgaacccgggtcatgacgtccggccttgc 25546365  T
Q  263 aatttcggcattt 275  Q
    |||||||||||||    
T  25546366 aatttcggcattt 25546378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 8439215 - 8439102
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || |||||||||||||||||||||||||||||||||| |||||||||||| |||||||  ||||||||| ||||||| ||||||||| ||||||    
T  8439215 tttttttttgtcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggtcctgggttcgaatccgggtcacaacgtccgaccttgc 8439116  T
Q  263 aatttcggcatttg 276  Q
    ||||| ||||||||    
T  8439115 aattttggcatttg 8439102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 25112238 - 25112351
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||   ||||||| ||||||    
T  25112238 ttttttttggtcttagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcccgggttcgaacccaggtcatgacgtccgaccttgc 25112337  T
Q  263 aatttcggcatttg 276  Q
    |||||||| |||||    
T  25112338 aatttcggtatttg 25112351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 38781199 - 38781304
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| | || | |||||||||    
T  38781199 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacgacattcggccttgc 38781298  T
Q  263 aatttc 268  Q
    ||||||    
T  38781299 aatttc 38781304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 7162781 - 7162892
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||||||||||||||||||||  ||||||| | ||||||| || ||||||||||||||| |||||||||||||| |    
T  7162781 tttttttttgtcttagatgaagtggtaatccactgaaaataaact--cacacaattgtgaggtcccgagttcgaacccgggtcacaacgtccggccttac 7162878  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  7162879 aatttcggcatttg 7162892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 170 - 276
Target Start/End: Complemental strand, 41183945 - 41183839
Alignment:
Q  170 tggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcg 269  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||| |||||| | |||||||||||| ||||   |||||||||||||||||||||    
T  41183945 tggtcttagatgaagtgataatccactgaaaataaactcacacataactgtgaggtattgggttcgaacccaggtcaagacgtccggccttgcaatttcg 41183846  T
Q  270 gcatttg 276  Q
    |||||||    
T  41183845 gcatttg 41183839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 163 - 275
Target Start/End: Complemental strand, 48146890 - 48146778
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||| | || || | ||||||    
T  48146890 ttttttttggtcttagatgaagtggtaatccaatgaaaattaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacatctgaccttgc 48146791  T
Q  263 aatttcggcattt 275  Q
    |||||| ||||||    
T  48146790 aatttctgcattt 48146778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 171 - 276
Target Start/End: Original strand, 5772818 - 5772923
Alignment:
Q  171 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcgg 270  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||||| |||||| ||| ||||||||||||||| ||  ||||| ||||||||||||||    
T  5772818 ggtcttaaatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtttcgagttcgaacccgggtcacattgtccgaccttgcaatttcgg 5772917  T
Q  271 catttg 276  Q
    ||||||    
T  5772918 catttg 5772923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 172 - 277
Target Start/End: Complemental strand, 11355951 - 11355846
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||| || |||||||||| || | ||  |||||||| |||||||||||||||    
T  11355951 gtcttagatgaagtggtaatccactgaaattaaactcacacacaactgtgagatcccgggttcgaatccagatcataacgtccgaccttgcaatttcggc 11355852  T
Q  272 atttgt 277  Q
    ||||||    
T  11355851 atttgt 11355846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 27229484 - 27229584
Alignment:
Q  179 atgaagtggtaatccactgaaaataaa-ctcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgt 277  Q
    |||||||||||||||||||||| |||| ||||||||||||| ||||||| ||||||||||||| |||| | ||||||||||||||||||||| |||||||    
T  27229484 atgaagtggtaatccactgaaattaaaactcacacacaactgtgaggtcccgggttcgaacccaggtcacgacgtccggccttgcaatttcgacatttgt 27229583  T
Q  278 c 278  Q
    |    
T  27229584 c 27229584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 173 - 276
Target Start/End: Original strand, 43753754 - 43753858
Alignment:
Q  173 tcttagatgaagtggtaatccactgaaaataaa-ctcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    |||||||||||||||||||||||||||| |||| |||||| |||||| ||||||  ||||||||||||| |||| | |||||||||||||||||||||||    
T  43753754 tcttagatgaagtggtaatccactgaaattaaaactcacatacaactgtgaggttccgggttcgaacccaggtcacgacgtccggccttgcaatttcggc 43753853  T
Q  272 atttg 276  Q
    |||||    
T  43753854 atttg 43753858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 28603148 - 28603035
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||||||||||| | |||||||||| |||| | ||| ||||||||||||||| | |||| | ||||||||||||||    
T  28603148 tttttttttgtcttagatgaagtggtaatccactgagattaaactcacatacaattgtgaagtctcgggttcgaactcaggtcacgacgtccggccttgc 28603049  T
Q  263 aatttcggcatttg 276  Q
     |||||||||||||    
T  28603048 gatttcggcatttg 28603035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 171 - 276
Target Start/End: Complemental strand, 38033858 - 38033753
Alignment:
Q  171 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcgg 270  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||| ||||||| ||| || |||||||| || ||| ||||| |||| |||||||||    
T  38033858 ggtcatagatgaagtggtactccactgaaaataaactcacacacaactgtgaggtcccggatttgaacccggatcacaatgtccgaccttacaatttcgg 38033759  T
Q  271 catttg 276  Q
    ||||||    
T  38033758 catttg 38033753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 43203442 - 43203330
Alignment:
Q  164 ttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgca 263  Q
    |||| ||||||||| ||||||||  ||||||||| |||||||||||||||||||| | ||||| |||||||||||||||||| |  ||||| ||||| ||    
T  43203442 tttttttggtcttatatgaagtgaaaatccactgtaaataaactcacacacaactgtaaggtcccgggttcgaacccgggtcacggcgtcccgccttaca 43203343  T
Q  264 atttcggcatttg 276  Q
    |||||||||||||    
T  43203342 atttcggcatttg 43203330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 163 - 278
Target Start/End: Complemental strand, 5587417 - 5587302
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||||||||  || | |||||||  |||||||||||||| || | | |||||| |||||    
T  5587417 ttttttttggtcttagatgaagtggtaatccactaaaattaaactcacacgtaaatgtgaggtcctgggttcgaacccggatcacgatgtccggacttgc 5587318  T
Q  263 aatttcggcatttgtc 278  Q
    ||||||||||||||||    
T  5587317 aatttcggcatttgtc 5587302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 163 - 278
Target Start/End: Complemental strand, 5592378 - 5592263
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||||||||  || | |||||||  |||||||||||||| || | | |||||| |||||    
T  5592378 ttttttttggtcttagatgaagtggtaatccactaaaattaaactcacacgtaaatgtgaggtcctgggttcgaacccggatcacgatgtccggacttgc 5592279  T
Q  263 aatttcggcatttgtc 278  Q
    ||||||||||||||||    
T  5592278 aatttcggcatttgtc 5592263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 163 - 278
Target Start/End: Original strand, 32606321 - 32606436
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || |||||||||||| ||||||| |||||||| |||| ||||| | |||| | |||||||||||||||||| ||||| | ||||||||||||||    
T  32606321 tttttttttgtcttagatgaattggtaattcactgaaattaaattcacataaaactgtaaggtctcgggttcgaacctgggtcacgacgtccggccttgc 32606420  T
Q  263 aatttcggcatttgtc 278  Q
    |||||||| |||||||    
T  32606421 aatttcggtatttgtc 32606436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 163 - 269
Target Start/End: Original strand, 39513974 - 39514080
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || |||| ||||||||||||||||||| |||| |||||||||||| |||| | ||||| ||||||||||| |||||| | ||||||||||||||    
T  39513974 tttttttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtaaggtcccgggttcgaactcgggtcacgacgtccggccttgc 39514073  T
Q  263 aatttcg 269  Q
    |||||||    
T  39514074 aatttcg 39514080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 163 - 275
Target Start/End: Complemental strand, 47557918 - 47557806
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||| ||||||||| |||||||||| |||||| ||||||  ||||||||||||||||||   |||| || |||||     
T  47557918 tttttttttgtcttagatgaagtggtaaaccactgaaattaaactcacatacaactgtgaggttccgggttcgaacccgggtcatgacgtgcgaccttgt 47557819  T
Q  263 aatttcggcattt 275  Q
    |||||||||||||    
T  47557818 aatttcggcattt 47557806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 276
Target Start/End: Original strand, 15634868 - 15634983
Alignment:
Q  161 tatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggcctt 260  Q
    ||||||| ||||  |||||||||||||||||| ||||||||||||||||||||||||| ||| ||  ||| |||||| ||||||| | ||||||| | ||    
T  15634868 tattttttttggctttagatgaagtggtaatctactgaaaataaactcacacacaactgtgaagttccggtttcgaatccgggtcacgacgtccgacttt 15634967  T
Q  261 gcaatttcggcatttg 276  Q
     |||||||||||||||    
T  15634968 acaatttcggcatttg 15634983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 29484746 - 29484859
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || |||||| |||||||| ||||||||||||| |||||||||| |||| | ||||||| ||||||| ||||| | ||   ||||||||||||||    
T  29484746 tttttttttgtcttatatgaagtgataatccactgaaattaaactcacatacaattgtgaggtcccgggttcaaacccagatcatgacgtccggccttgc 29484845  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  29484846 aatttcggcatttg 29484859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 43170939 - 43171045
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||||| ||||||||||| ||||| |||||||||| ||||||  || ||||| | || ||||| ||||  | |||||||||||||||||||||||    
T  43170939 gtcttagatgacgtggtaatccattgaaattaaactcacatacaactgggaagtctccgatttgaacctgggttacgacgtccggccttgcaatttcggc 43171038  T
Q  272 atttgtc 278  Q
    |||||||    
T  43171039 atttgtc 43171045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 19630665 - 19630714
Alignment:
Q  169 ttggtcttagatgaagtggtaatccactgaaaataaactcacacacaact 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19630665 ttggtcttagatgaagtggtaatccactgaaaataaactcacacacaact 19630714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 160 - 275
Target Start/End: Original strand, 27915568 - 27915684
Alignment:
Q  160 atatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaac-ccgggtctcaacgtccggcc 258  Q
    |||||||| ||||||||||||||||||||||| || ||||| |||||||| |||||||| |||| |||  ||||||||| |  |||| | ||||||| ||    
T  27915568 atattttttttggtcttagatgaagtggtaattcattgaaattaaactcatacacaactgtgagatcttaggttcgaactcaaggtcacgacgtccgacc 27915667  T
Q  259 ttgcaatttcggcattt 275  Q
    |||||||||| ||||||    
T  27915668 ttgcaatttcagcattt 27915684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 275
Target Start/End: Original strand, 4001835 - 4001945
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||| ||| ||||| ||||||||||||   ||  |||||| || ||||||||||||||| | || |||||||||||    
T  4001835 tttttttttgtcttagatgaagtggtaaaccattgaaattaaactcacacag--ctgagaggtcccgagttcgaacccgggtcacgacatccggccttgc 4001932  T
Q  263 aatttcggcattt 275  Q
    ||||||| |||||    
T  4001933 aatttcgacattt 4001945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 275
Target Start/End: Original strand, 48444143 - 48444255
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || |||||||||||||||||||| |||||||| |||||| |||||||||| ||| ||   |||||||||||| | || | |||||| | ||| |    
T  48444143 tttttttttgtcttagatgaagtggtaattcactgaaattaaacttacacacaactgtgaagtacagggttcgaacccagatcacgacgtccagtcttac 48444242  T
Q  263 aatttcggcattt 275  Q
    |||||||||||||    
T  48444243 aatttcggcattt 48444255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 267
Target Start/End: Original strand, 5462939 - 5463045
Alignment:
Q  161 tatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggcctt 260  Q
    ||||||| ||||||| ||||||||||||  |||| ||||| ||||||||||||||||| |||| |||| |||||||| |||| || |||| |||  | ||    
T  5462939 tattttttttggtctaagatgaagtggttctccattgaaattaaactcacacacaactgtgagatctcaggttcgaatccggatcacaacatccaacatt 5463038  T
Q  261 gcaattt 267  Q
    |||||||    
T  5463039 gcaattt 5463045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 172 - 276
Target Start/End: Original strand, 42081619 - 42081720
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||| |||||||||| |||||||||||||||  ||||||||| ||||||| | ||||||||||||| || |||||| ||  |||||||||| | |    
T  42081619 gtcttagataaagtggtaattcactgaaaataaact--cacacaactgtgaggtc-caggttcgaacccggatcacaacgttcgatcttgcaattttgac 42081715  T
Q  272 atttg 276  Q
    |||||    
T  42081716 atttg 42081720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 13887282 - 13887195
Alignment:
Q  187 gtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 276  Q
    |||||||||||||| |||||||| |||  ||| ||||||  |||||||||||| ||||| | |||||||| ||||||| |||||||||||    
T  13887282 gtaatccactgaaattaaactcataca--actgtgaggttccgggttcgaacctgggtcacgacgtccggtcttgcaagttcggcatttg 13887195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 34763560 - 34763510
Alignment:
Q  182 aagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggt 232  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  34763560 aagtggtaatccactgaaattaaactcacacacaactgtgaggtcccgggt 34763510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 245
Target Start/End: Original strand, 35577867 - 35577949
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtc 245  Q
    ||||| || |||||||||||| | |||||||| ||||| |||||| |||||||| | ||| ||||||||||||||| ||||||    
T  35577867 tttttttttgtcttagatgaaattgtaatccattgaaattaaacttacacacaattgtgaagtctcgggttcgaactcgggtc 35577949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 40657657 - 40657591
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaac 238  Q
    ||||||||||||||| ||||||||||||| ||||||| |||| |||| ||||||||| | |||||||    
T  40657657 gtcttagatgaagtgataatccactgaaattaaactcgcacataactatgaggtctcagattcgaac 40657591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 10220464 - 10220540
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaaccc 240  Q
    ||||| || |||||||||||| |||||| ||||||||| |||||||||||| |||| |||||| |||| |||||||||    
T  10220464 tttttttttgtcttagatgaa-tggtaaaccactgaaattaaactcacacaaaactgtgaggtttcggattcgaaccc 10220540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 276
Target Start/End: Complemental strand, 25872892 - 25872787
Alignment:
Q  171 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcgg 270  Q
    ||||||||||||||||||||  ||| ||||||||||||| |||||| | | |||||   |||||||||| || || | ||||||| ||||| ||| ||||    
T  25872892 ggtcttagatgaagtggtaaatcacagaaaataaactcatacacaattgtaaggtcataggttcgaacctggatcacgacgtccgaccttgtaatatcgg 25872793  T
Q  271 catttg 276  Q
    ||||||    
T  25872792 catttg 25872787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 268
Target Start/End: Complemental strand, 35309982 - 35309886
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttc 268  Q
    ||||||||||||||| ||| ||||||||| ||||||| ||||||| | |||| || ||| |||||| || ||||   |||||||||||| |||||||    
T  35309982 gtcttagatgaagtgataaaccactgaaattaaactcgcacacaattgtgagatcccggattcgaaaccaggtcaagacgtccggccttacaatttc 35309886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 31288224 - 31288275
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgag 223  Q
    ||||||||||||||||||| ||||||||| |||||| |||||||||| ||||    
T  31288224 gtcttagatgaagtggtaaaccactgaaattaaacttacacacaactgtgag 31288275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 18506281 - 18506341
Alignment:
Q  177 agatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaac 238  Q
    |||||||| ||||| ||||||||| ||||||||||||| ||| ||| |||||||||||||||    
T  18506281 agatgaagcggtaaaccactgaaattaaactcacacac-actgtgaagtctcgggttcgaac 18506341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 278
Target Start/End: Complemental strand, 40643099 - 40642996
Alignment:
Q  168 gttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaattt 267  Q
    |||||||||||| ||| || ||||||||||||| ||||||||||  ||       ||||||||||| |||||||| || ||| ||| |||||| ||||||    
T  40643099 gttggtcttagacgaaatgataatccactgaaattaaactcacattca-------ggtctcgggtttgaacccggatcacaatgtctggccttacaattt 40643007  T
Q  268 cggcatttgtc 278  Q
    || ||||||||    
T  40643006 cgacatttgtc 40642996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 276
Target Start/End: Original strand, 47960979 - 47961059
Alignment:
Q  196 tgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 276  Q
    ||||| |||||||||||||||||  |||||| ||||||||||||||| ||   ||||| | ||||| ||||| ||||||||    
T  47960979 tgaaattaaactcacacacaactacgaggtcccgggttcgaacccggttcatgacgtctgaccttgtaattttggcatttg 47961059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 10626451 - 10626513
Alignment:
Q  176 tagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaac 238  Q
    ||||||||||||| ||||||| |||||||||||||| | |||| ||| || | ||||||||||    
T  10626451 tagatgaagtggtgatccactaaaaataaactcacatataactatgaagttttgggttcgaac 10626513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 23036208 - 23036244
Alignment:
Q  175 ttagatgaagtggtaatccactgaaaataaactcaca 211  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  23036208 ttagatgaagtggtaatccattgaaattaaactcaca 23036244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 25049965 - 25050061
Alignment:
Q  179 atgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 275  Q
    ||||| |||||||||||| ||| |||||||||| |||||| |||| ||  | |||| || || |||| | ||||| | |||| ||||||||||||||    
T  25049965 atgaaatggtaatccacttaaattaaactcacatacaactgtgagatcatgagttcaaatccaggtcacgacgtctgacctttcaatttcggcattt 25050061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 853 - 966
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  853 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 952  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  953 aatttcggcatttg 966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 13942 - 14055
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || ||||||||||||||||    
T  13942 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacaacgtccggccttgc 14041  T
Q  263 aatttcggcatttg 276  Q
    |||||||| |||||    
T  14042 aatttcggtatttg 14055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 19622 - 19735
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || ||||||||||||||||    
T  19622 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacaacgtccggccttgc 19721  T
Q  263 aatttcggcatttg 276  Q
    |||||||| |||||    
T  19722 aatttcggtatttg 19735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 13204094 - 13203981
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| | ||||||||||||||    
T  13204094 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgc 13203995  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  13203994 aatttcggcatttg 13203981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 21018360 - 21018247
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| ||    
T  21018360 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggcctcgc 21018261  T
Q  263 aatttcggcatttg 276  Q
    ||||| ||||||||    
T  21018260 aattttggcatttg 21018247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 4824930 - 4825043
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| ||||| ||||| ||||||||||||||||    
T  4824930 ttttttttggtcttagatgaagtggtaatccattgaaaataaactcacacacaactgtgaggtcccgggtttgaacctgggtcacaacgtccggccttgc 4825029  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  4825030 aatttcggcatttg 4825043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 35317688 - 35317801
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||| ||||  |||||||| ||||||    
T  35317688 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaccccaggtcataacgtccgaccttgc 35317787  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  35317788 aatttcggcatttg 35317801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 163 - 273
Target Start/End: Original strand, 31909376 - 31909486
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||| ||||||||    
T  31909376 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtctggccttgc 31909475  T
Q  263 aatttcggcat 273  Q
    |||||| ||||    
T  31909476 aatttcagcat 31909486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 12257493 - 12257380
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||  |||||||||||| |||| ||||||| |||||| |    
T  12257493 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaattatgaggtcctgggttcgaacccaggtcacaacgtctggccttac 12257394  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  12257393 aatttcggcatttg 12257380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 172 - 275
Target Start/End: Complemental strand, 2971112 - 2971009
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||| | |||| |||||||| |    
T  2971112 gtcttagatgaagtggtaatccaccgaaaataaactcacacacaactgtgaggtctcaggttcgaacccgggtcacaacgtctgaccttacaatttcgac 2971013  T
Q  272 attt 275  Q
    ||||    
T  2971012 attt 2971009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 169 - 275
Target Start/End: Complemental strand, 29266006 - 29265900
Alignment:
Q  169 ttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttc 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| |||| | || ||||| ||||||    
T  29266006 ttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacaacattcgaccttgtaatttc 29265907  T
Q  269 ggcattt 275  Q
    | |||||    
T  29265906 gacattt 29265900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 6021117 - 6021016
Alignment:
Q  175 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 274  Q
    |||||| |||||||||||||||||||||||||||||||||||||  |||||| |||||||||| ||||||| ||||||| ||||||||||||| | ||||    
T  6021117 ttagataaagtggtaatccactgaaaataaactcacacacaactgagaggtcccgggttcgaatccgggtcacaacgtcaggccttgcaattttgacatt 6021018  T
Q  275 tg 276  Q
    ||    
T  6021017 tg 6021016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 40177749 - 40177646
Alignment:
Q  175 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 274  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||| ||  |||||| ||| || |||| ||||||||||||||||||||||| ||||    
T  40177749 ttagatgaagtggtaatccactgaaaataaactcacacacaacggtgaagttccgggttggaatccaggtcacaacgtccggccttgcaatttcgacatt 40177650  T
Q  275 tgtc 278  Q
    ||||    
T  40177649 tgtc 40177646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 175 - 276
Target Start/End: Original strand, 1191543 - 1191644
Alignment:
Q  175 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 274  Q
    ||||||||||| |||| ||||||||| ||||||||||||||| | ||||||| ||||||||||||||| || | ||||||||||||||||||||| ||||    
T  1191543 ttagatgaagttgtaagccactgaaattaaactcacacacaattgtgaggtcccgggttcgaacccggatcacgacgtccggccttgcaatttcgtcatt 1191642  T
Q  275 tg 276  Q
    ||    
T  1191643 tg 1191644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 21112180 - 21112071
Alignment:
Q  169 ttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttc 268  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||| | ||||||||||  |||| | ||||  | ||||||||||||    
T  21112180 ttggtcttagatgatgtggtaatccactgaaaataaactcaaacacaactttgaggtcccaggttcgaacctaggtcacgacgtatgtccttgcaatttc 21112081  T
Q  269 ggcatttgtc 278  Q
    | ||||||||    
T  21112080 gacatttgtc 21112071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 32143405 - 32143474
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggt 232  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  32143405 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggt 32143474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 27721550 - 27721456
Alignment:
Q  181 gaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 275  Q
    |||||||||||||||||||| |||| ||||| |||||| ||||||| ||||||| |||||||||| | ||||||| | |||||||||||||||||    
T  27721550 gaagtggtaatccactgaaattaaattcacatacaactgtgaggtcccgggttcaaacccgggtcacgacgtccgactttgcaatttcggcattt 27721456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 8734134 - 8734020
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaa-ctcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttg 261  Q
    ||||| || ||||||||||||||||||||||||||||  |||| |||||  |||||| ||||||  ||||||||||||  |||| | |||||||||||||    
T  8734134 tttttttttgtcttagatgaagtggtaatccactgaagttaaaactcacgtacaactgtgaggttccgggttcgaacctaggtcacgacgtccggccttg 8734035  T
Q  262 caatttcggcatttg 276  Q
    ||||||| |||||||    
T  8734034 caatttcagcatttg 8734020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 172 - 278
Target Start/End: Complemental strand, 14270652 - 14270546
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||||||||| |||||||||||||||||||| | |||||||| |||| ||||||||| |||  |||||| | |||||||   || ||||||||||    
T  14270652 gtcttagatgaagtgataatccactgaaaataaacttaaacacaactatgagatctcgggttggaatacgggtcacgacgtccgatttttcaatttcggc 14270553  T
Q  272 atttgtc 278  Q
    |||||||    
T  14270552 atttgtc 14270546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 172 - 275
Target Start/End: Complemental strand, 23262672 - 23262573
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||    |||||||||    ||| |||| ||| ||||||||||||||||    
T  23262672 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggttctaggttcgaac----gtcacaacatccagccttgcaatttcggc 23262577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 28591341 - 28591446
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || |||| |||||||||||||| ||||||| | |||||||| |||||||| |||||| || |||| ||||||| ||| | ||||||||||||||    
T  28591341 tttttttttgtctaagatgaagtggtaaaccactgacattaaactcatacacaactgtgaggtttcaggtttgaacccgagtcactacgtccggccttgc 28591440  T
Q  263 aatttc 268  Q
    ||||||    
T  28591441 aatttc 28591446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 276
Target Start/End: Original strand, 3386894 - 3387004
Alignment:
Q  173 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggt-----ct--cgggttcgaacccgggtctcaacgtccggccttgcaat 265  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||| ||||||     ||  ||||||||||||||| |  | |||||||||||||||||    
T  3386894 tcttagaagaagtggtaatccactgaaattaaattcacacacaactttgaggttccgacttccgggttcgaacccggataacgacgtccggccttgcaat 3386993  T
Q  266 ttcggcatttg 276  Q
    |||||||||||    
T  3386994 ttcggcatttg 3387004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 17984731 - 17984811
Alignment:
Q  161 tatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccg 241  Q
    ||||||| ||||| |||||||||||| ||| ||||| ||| ||||||||||||||||| ||||||  ||||||||||||||    
T  17984731 tatttttattggttttagatgaagtgataagccactaaaattaaactcacacacaactgtgaggttccgggttcgaacccg 17984811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 278
Target Start/End: Complemental strand, 35546061 - 35545955
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||||||||| ||||||||| ||| ||||| |||| |||||| ||||||| | ||||||||  ||| || | |||| |||  |||||||||||||    
T  35546061 gtcttagatgaagtgataatccacttaaattaaacccacatacaactgtgaggtcccaggttcgaattcggatcacgacgttcggttttgcaatttcggc 35545962  T
Q  272 atttgtc 278  Q
    |||||||    
T  35545961 atttgtc 35545955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 276
Target Start/End: Complemental strand, 2786398 - 2786295
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    |||||||||||||||||||||||||| || |||||||| |||||||| ||||||| | |||| |||  ||| || |  |||||| |||| ||||||||||    
T  2786398 gtcttagatgaagtggtaatccactg-aattaaactcatacacaactgtgaggtcccaggtttgaattcggatcacggcgtccgaccttacaatttcggc 2786300  T
Q  272 atttg 276  Q
    |||||    
T  2786299 atttg 2786295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 11124789 - 11124676
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||||||||| ||| ||||| |||| | || | ||||||   ||||||||| |  |||| | ||||||||||||||    
T  11124789 tttttttttgtcttagatgaagtggtaatccactcaaattaaacccacataaaattatgaggttctgggttcgaatcaaggtcacgacgtccggccttgc 11124690  T
Q  263 aatttcggcatttg 276  Q
    ||||| | ||||||    
T  11124689 aattttgacatttg 11124676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 2756047 - 2755950
Alignment:
Q  178 gatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 275  Q
    ||||||| ||||| || || ||||||||| |||||||||||   |||||||| |||| || | || || | |||| ||||||||||||||||||||||    
T  2756047 gatgaaggggtaaaccgctaaaaataaacccacacacaactgctaggtctcgagttcaaaactggatcaccacgttcggccttgcaatttcggcattt 2755950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 276
Target Start/End: Original strand, 9576985 - 9577065
Alignment:
Q  196 tgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 276  Q
    ||||| |||||||||| |||||| ||||||   |||||||||||| ||||   ||||| |||||||||||||| |||||||    
T  9576985 tgaaattaaactcacatacaactgtgaggttctgggttcgaacccaggtcatgacgtctggccttgcaatttcagcatttg 9577065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 17465214 - 17465170
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaact 207  Q
    ||||| || ||||||||||||||||||||||||||||| ||||||    
T  17465214 tttttttttgtcttagatgaagtggtaatccactgaaattaaact 17465170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 239
Target Start/End: Original strand, 41580078 - 41580142
Alignment:
Q  175 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacc 239  Q
    |||||||||||||||||||| | ||| |||||  |||||||||| |||||| |||| ||||||||    
T  41580078 ttagatgaagtggtaatccattaaaattaaacctacacacaactgtgaggtttcggattcgaacc 41580142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 19181847 - 19181793
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaact 218  Q
    ||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||    
T  19181847 tttttttttgtcttaaatgaagtg-taatccactgaaattaaactcacacacaact 19181793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 4925723 - 4925673
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacaca 213  Q
    ||||| || ||||||||||||||||||| ||||||||| |||||| |||||    
T  4925723 tttttttttgtcttagatgaagtggtaaaccactgaaattaaacttacaca 4925673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 277
Target Start/End: Original strand, 3049094 - 3049159
Alignment:
Q  212 cacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgt 277  Q
    ||||||| ||||||| |||||| |||  |||||| |  |||||||||||||||||| |||||||||    
T  3049094 cacaactgtgaggtcccgggtttgaaatcgggtcacggcgtccggccttgcaattttggcatttgt 3049159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 275
Target Start/End: Complemental strand, 30127960 - 30127919
Alignment:
Q  234 cgaacccgggtctcaacgtccggccttgcaatttcggcattt 275  Q
    |||||||||||| | | |||||||||||||||||||||||||    
T  30127960 cgaacccgggtcacgatgtccggccttgcaatttcggcattt 30127919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 7824445 - 7824558
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  7824445 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 7824544  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  7824545 aatttcggcatttg 7824558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 43247641 - 43247754
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||| ||||||||||||||||    
T  43247641 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcacaacgtccggccttgc 43247740  T
Q  263 aatttcggcatttg 276  Q
    ||||| ||||||||    
T  43247741 aattttggcatttg 43247754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 161 - 276
Target Start/End: Original strand, 29689471 - 29689586
Alignment:
Q  161 tatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggcctt 260  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||    
T  29689471 tatttttttaggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggcctt 29689570  T
Q  261 gcaatttcggcatttg 276  Q
    ||||||||||||||||    
T  29689571 gcaatttcggcatttg 29689586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 54151672 - 54151785
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  54151672 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 54151771  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  54151772 aatttcggcatttg 54151785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 163 - 278
Target Start/End: Complemental strand, 28844642 - 28844526
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaa-taaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttg 261  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||  | |||||||||||||||| |||||||||||||||    
T  28844642 ttttttttggtcttagatgaagtggtaatccactgaaaaataaactcacacacaactgtgaggttccaggttcgaacccgggtcacaacgtccggccttg 28844543  T
Q  262 caatttcggcatttgtc 278  Q
    |||||||||||||||||    
T  28844542 caatttcggcatttgtc 28844526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 3112986 - 3113099
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||| |||||  | ||||||||||||||    
T  3112986 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaactcgggttacgacgtccggccttgc 3113085  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  3113086 aatttcggcatttg 3113099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 9349667 - 9349780
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || | ||||||| ||||||    
T  9349667 ttttttttggtgttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacgacgtccgaccttgc 9349766  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  9349767 aatttcggcatttg 9349780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 36228985 - 36229098
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| ||   ||||||||||||||    
T  36228985 ttttttttggtcttagatgaagtggtaatccattgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcatgacgtccggccttgc 36229084  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  36229085 aatttcggcatttg 36229098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 51665916 - 51666029
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||| ||||   ||||||||||||||    
T  51665916 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggtcccgggttcgaacccaggtcatgacgtccggccttgc 51666015  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  51666016 aatttcggcatttg 51666029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 171 - 276
Target Start/End: Complemental strand, 54158395 - 54158290
Alignment:
Q  171 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcgg 270  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||   ||||||||||||||||||||||    
T  54158395 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcatgacgtccggccttgcaatttcgg 54158296  T
Q  271 catttg 276  Q
    ||||||    
T  54158295 catttg 54158290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 4601562 - 4601449
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || |||||||||||| |||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||   ||||||||||||||    
T  4601562 tttttttttgtcttagatgaactggtaatccactgaaaataaactcacacacaactgtgaggttccgggttcgaacccgggtcatgacgtccggccttgc 4601463  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  4601462 aatttcggcatttg 4601449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 178 - 276
Target Start/End: Original strand, 55018040 - 55018138
Alignment:
Q  178 gatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 276  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| | ||||||    
T  55018040 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaattttgacatttg 55018138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 52500975 - 52500862
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| || ||||||||||||| ||   |||||||||||| |    
T  52500975 ttttttttggtcttagatgaagtggtaatctactgaaaataaactcacacacaactgtgaggtttcaggttcgaacccggatcatgacgtccggccttac 52500876  T
Q  263 aatttcggcatttg 276  Q
    ||||||| ||||||    
T  52500875 aatttcgacatttg 52500862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 174 - 278
Target Start/End: Complemental strand, 1778977 - 1778873
Alignment:
Q  174 cttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcat 273  Q
    ||||||||||||||||||||| |||||||||| ||| |||||| | ||||||  |||||||||||||||||| ||| |||||||||||||||||||||||    
T  1778977 cttagatgaagtggtaatccattgaaaataaattcaaacacaattgtgaggttccgggttcgaacccgggtcacaatgtccggccttgcaatttcggcat 1778878  T
Q  274 ttgtc 278  Q
    |||||    
T  1778877 ttgtc 1778873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 163 - 276
Target Start/End: Original strand, 42392796 - 42392909
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||| ||||||||| ||||| ||   ||||||| ||||||    
T  42392796 ttttttttggtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtcccgggttcgagcccggatcatgacgtccgaccttgc 42392895  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  42392896 aatttcggcatttg 42392909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 173 - 276
Target Start/End: Original strand, 35461480 - 35461583
Alignment:
Q  173 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 272  Q
    ||||||||||| || ||||| || |||||||||||||||||||||| ||||||  ||||||||||||||| || ||||||||| ||||||||||||||||    
T  35461480 tcttagatgaaatgataatctacagaaaataaactcacacacaactgtgaggttccgggttcgaacccggatcacaacgtccgaccttgcaatttcggca 35461579  T
Q  273 tttg 276  Q
    ||||    
T  35461580 tttg 35461583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 33334745 - 33334632
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || |||||| |||||||| ||||| ||||||| ||||||||||||||||| ||||||| ||| ||||||| | |||| ||||||||||| ||||    
T  33334745 tttttttttgtcttatatgaagtgataatctactgaaattaaactcacacacaactgtgaggtcccggattcgaactcaggtcacaacgtccggctttgc 33334646  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  33334645 aatttcggcatttg 33334632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 276
Target Start/End: Complemental strand, 29750749 - 29750645
Alignment:
Q  171 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcgg 270  Q
    |||||||||||||||||||||||||||||  ||| ||||| ||||| | |||||||||  ||||||| ||||||| | |||||| |||||||||||||||    
T  29750749 ggtcttagatgaagtggtaatccactgaatttaa-ctcacgcacaaatgtgaggtctctagttcgaatccgggtcacgacgtccagccttgcaatttcgg 29750651  T
Q  271 catttg 276  Q
    ||||||    
T  29750650 catttg 29750645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 38257304 - 38257400
Alignment:
Q  173 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcg 269  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| | ||||||   |||||||||||| |||| | ||||||| |||||||||||||    
T  38257304 tcttagatgaagtggtaatccgctgaaattaaactcacacacaattgtgaggttctgggttcgaacccaggtcacgacgtccgaccttgcaatttcg 38257400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 163 - 242
Target Start/End: Complemental strand, 7958706 - 7958627
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgg 242  Q
    ||||| ||||| |||||||||||||||||||||| |||||||||| ||||| |||| ||||||| |||||||||||||||    
T  7958706 ttttttttggtattagatgaagtggtaatccactaaaaataaacttacacataactgtgaggtcccgggttcgaacccgg 7958627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 55320391 - 55320454
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtc 226  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  55320391 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactatgaggtc 55320454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 41377716 - 41377608
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||      ||||||| |||||||||||| || ||   |||||||||||| |    
T  41377716 ttttttttggtcttagatgaagtggtaatccgctgaaaataaactcacaca-----gtgaggtcccgggttcgaacctggatcatgacgtccggccttac 41377622  T
Q  263 aatttcggcatttg 276  Q
    ||||| ||||||||    
T  41377621 aattttggcatttg 41377608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 163 - 275
Target Start/End: Original strand, 475272 - 475383
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || |||||||||||||||||||| |||||||  ||||||||||||||||| ||||||  || |||||||||||| ||   ||||||| ||||||    
T  475272 ttttttttagtcttagatgaagtggtaattcactgaat-taaactcacacacaactgtgaggttccgagttcgaacccggatcatgacgtccgaccttgc 475370  T
Q  263 aatttcggcattt 275  Q
    |||||| ||||||    
T  475371 aatttcagcattt 475383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 163 - 275
Target Start/End: Original strand, 32001415 - 32001527
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || |||||| ||||||||||||  |||||||||||||||||||||||||| |||| ||||| ||||||||| || ||   | || ||||||| |    
T  32001415 tttttttttgtcttatatgaagtggtaaatcactgaaaataaactcacacacaactgtgagatctcgagttcgaacctggttcaagatgttcggccttac 32001514  T
Q  263 aatttcggcattt 275  Q
    |||||||||||||    
T  32001515 aatttcggcattt 32001527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 172 - 276
Target Start/End: Complemental strand, 43775351 - 43775247
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||||||||||||||||||||||| |||||||| | |||||| |||| |  ||| ||||||| |  ||| ||||||||| |||| ||||||||||    
T  43775351 gtcttagatgaagtggtaatccactgaaattaaactcaaatacaactgtgagattccggattcgaacgcaagtcacaacgtccgaccttacaatttcggc 43775252  T
Q  272 atttg 276  Q
    |||||    
T  43775251 atttg 43775247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 275
Target Start/End: Original strand, 40756728 - 40756831
Alignment:
Q  173 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtc-tcaacgtccggccttgcaatttcggc 271  Q
    |||||||||||||||||| | ||||||| ||||||||||| ||||| |||||||||||||||||| |||| || | | |||| | ||||||||||| |||    
T  40756728 tcttagatgaagtggtaaactactgaaattaaactcacacgcaactgtgaggtctcgggttcgaatccggatcatgatcgtctgaccttgcaattttggc 40756827  T
Q  272 attt 275  Q
    ||||    
T  40756828 attt 40756831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 266
Target Start/End: Original strand, 47635005 - 47635099
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatt 266  Q
    ||||||||||||||||||||| ||||||| |||||| ||||| ||||  ||||||  || ||||||||| |||| ||| ||||| ||||||||||    
T  47635005 gtcttagatgaagtggtaatcaactgaaattaaacttacacataactgcgaggtcctggattcgaacccaggtcacaatgtccgaccttgcaatt 47635099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 8151471 - 8151373
Alignment:
Q  177 agatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 275  Q
    |||||||  ||||||||| ||||| |||||| ||||| |||| |||| |||||||||||||||||| || | |||| || | |||||||||| ||||||    
T  8151471 agatgaaccggtaatccattgaaattaaactgacacataactgtgagatctcgggttcgaacccggatcacgacgttcgtctttgcaatttcagcattt 8151373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 172 - 278
Target Start/End: Complemental strand, 50729652 - 50729546
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||||||||||||||| | ||||| |||||||||| | ||||  ||||||||  ||||||| || | || | ||||| | |||| ||||||||||    
T  50729652 gtcttagatgaagtggtaatctattgaaattaaactcacataaaactgcgaggtctcatgttcgaatccagatcacgacgtctgaccttacaatttcggc 50729553  T
Q  272 atttgtc 278  Q
    |||||||    
T  50729552 atttgtc 50729546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 50783197 - 50783303
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||||||||||||||| | ||||| |||||||||| | ||||  ||||||||  ||||||| || | || | ||||| | |||| ||||||||||    
T  50783197 gtcttagatgaagtggtaatctattgaaattaaactcacataaaactgcgaggtctcatgttcgaatccagatcacgacgtctgaccttacaatttcggc 50783296  T
Q  272 atttgtc 278  Q
    |||||||    
T  50783297 atttgtc 50783303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 172 - 278
Target Start/End: Complemental strand, 51054829 - 51054723
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||||||||||||||||||| ||| |||||| ||| |||| | |||||| | | |||||||||||  ||  ||||| || ||||| ||||||| |    
T  51054829 gtcttagatgaagtggtaatccacttaaattaaacttacaaacaattatgaggttttgagttcgaacccgaatcataacgttcgaccttgtaatttcgac 51054730  T
Q  272 atttgtc 278  Q
    |||||||    
T  51054729 atttgtc 51054723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 278
Target Start/End: Original strand, 448884 - 448981
Alignment:
Q  181 gaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 278  Q
    |||||||||||||||| ||| |||||||||| |||||| |||||||   ||||||||  ||| || | |||||||||||| |||||| | ||||||||    
T  448884 gaagtggtaatccactaaaattaaactcacaaacaactgtgaggtcctaggttcgaattcggatcacgacgtccggccttacaattttgacatttgtc 448981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 2590801 - 2590847
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactca 209  Q
    ||||| || ||||||||||||||||||||||||||||| ||||||||    
T  2590801 tttttttttgtcttagatgaagtggtaatccactgaaattaaactca 2590847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 53182858 - 53182757
Alignment:
Q  175 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 274  Q
    |||||||||||||||| || || ||| |||||||||||| || | |||||| ||  |||| || |||| || ||||||| | |||||||||||| |||||    
T  53182858 ttagatgaagtggtaaacccctaaaattaaactcacacataattgtgaggtatcatgttcaaatccggatcacaacgtctgaccttgcaatttcagcatt 53182759  T
Q  275 tg 276  Q
    ||    
T  53182758 tg 53182757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 275
Target Start/End: Complemental strand, 27230794 - 27230692
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    |||| ||||||||||||||| |||||||| |||| |||||||||||| |||  || || ||| ||| || |||| | | ||| |||||||||||||| ||    
T  27230794 gtctgagatgaagtggtaattcactgaaattaaattcacacacaactgtga-atcccgagtttgaatccaggtcacgatgtctggccttgcaatttcagc 27230696  T
Q  272 attt 275  Q
    ||||    
T  27230695 attt 27230692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 277
Target Start/End: Original strand, 8137633 - 8137736
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||| ||||||||| ||| ||||| ||||||  ||||||||| |||||| || | ||| ||| ||||||   ||||||| |||||||||||  ||    
T  8137633 gtcttagataaagtggtaagccattgaaattaaact--cacacaactgtgaggtttcagattcaaactcgggtcatgacgtccgaccttgcaatttttgc 8137730  T
Q  272 atttgt 277  Q
    ||||||    
T  8137731 atttgt 8137736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 164 - 276
Target Start/End: Original strand, 9965 - 10077
Alignment:
Q  164 ttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgca 263  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  9965 tttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactatgaggtcccgggttcgaacccgggttacgacgtccggccttgca 10064  T
Q  264 atttcggcatttg 276  Q
    |||||||||||||    
T  10065 atttcggcatttg 10077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 4e-41; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 33704353 - 33704240
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  33704353 ttttttttggtcttaaatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 33704254  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  33704253 aatttcggcatttg 33704240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 33621631 - 33621518
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  33621631 ttttttttggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 33621532  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  33621531 aatttcggcatttg 33621518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 21037427 - 21037315
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||| |||||||||| ||| ||||||||||||||||    
T  21037427 ttttttttggtcttagatgaagtggtaattcactgaaaataaactcacacacaactgtgaggtc-cggattcgaacccgagtcacaacgtccggccttgc 21037329  T
Q  263 aatttcggcatttg 276  Q
    |||||| |||||||    
T  21037328 aatttcagcatttg 21037315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 163 - 278
Target Start/End: Complemental strand, 4464264 - 4464149
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||| | ||||||||||||| ||   ||||||||||||||    
T  4464264 ttttttttggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccaggttcgaacccggatcatgacgtccggccttgc 4464165  T
Q  263 aatttcggcatttgtc 278  Q
    ||||||||||||||||    
T  4464164 aatttcggcatttgtc 4464149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 28323069 - 28322956
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||| ||||||||||||||| ||   |||||||||||| |    
T  28323069 tttttttttgtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttac 28322970  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  28322969 aatttcggcatttg 28322956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 2959286 - 2959173
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| ||||||| ||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||||||||||   ||| | |  |||||||||||    
T  2959286 ttttttttggtctaagatgaagtggtattccacggaaattaaactcacacacaactgtgaggtctcgggttcgaacctaagtcacgatatccggccttgc 2959187  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  2959186 aatttcggcatttg 2959173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 275
Target Start/End: Complemental strand, 16518558 - 16518448
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || |||||||||||| |||||||||||||||||||||||||  ||||||| |||| ||  |||||||||||| |||| ||||||||| ||||||    
T  16518558 tttttttttgtcttagatgaaatggtaatccactgaaaataaactca--cacaactgtgagctcctgggttcgaacccaggtcacaacgtccgaccttgc 16518461  T
Q  263 aatttcggcattt 275  Q
    ||||| |||||||    
T  16518460 aattttggcattt 16518448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 19145607 - 19145495
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||||||||||||| |||| |||||||||| | ||||||| ||||||| ||  |||||| | ||||||||||||||    
T  19145607 tttttttttgtcttagatgaagtggtaatccactgaaattaaattcacacacaattgtgaggtcccgggttc-aaaacgggtcacgacgtccggccttgc 19145509  T
Q  263 aatttcggcatttg 276  Q
    |||||| |||||||    
T  19145508 aatttcagcatttg 19145495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 21000829 - 21000716
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || |||| |||||||||||||| ||||||||| ||||| ||||||||| | ||||||| ||||||||||||| ||||   |||| |||||||||    
T  21000829 tttttttttgtctcagatgaagtggtaaaccactgaaattaaacccacacacaattgtgaggtcccgggttcgaacccaggtcatgacgtacggccttgc 21000730  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  21000729 aatttcggcatttg 21000716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 280
Target Start/End: Original strand, 29009641 - 29009758
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || |||||||||||||||||||| |||| ||||||||||||||||||||| ||||||| | ||||||||  ||||||   |||||||||||| |    
T  29009641 tttttttttgtcttagatgaagtggtaattcactaaaaataaactcacacacaactgtgaggtcccaggttcgaattcgggtcatgacgtccggccttac 29009740  T
Q  263 aatttcggcatttgtccg 280  Q
    || ||| |||||||||||    
T  29009741 aacttcagcatttgtccg 29009758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 35218631 - 35218700
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggt 232  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  35218631 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggt 35218700  T

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Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 24619079 - 24619185
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||| | ||||||| |||| |||||| |||||| | |||| ||||||| |||||| | |    
T  24619079 gtcttagatgaagtggtaatcgactgaaattaaactcacacacaattatgaggtcacgggatcgaactcgggtcacgacgttcggccttacaattttgac 24619178  T
Q  272 atttgtc 278  Q
    |||||||    
T  24619179 atttgtc 24619185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 361148 - 361035
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||| ||||||||||||| |||||||||| | |||| ||||||  |||||||||||||| ||| | | || |||||||||    
T  361148 tttttttttgtcttagatgaagtgttaatccactgaaattaaactcacatataactgtgaggttccgggttcgaacccgtgtcacgatgttcggccttgc 361049  T
Q  263 aatttcggcatttg 276  Q
    ||||| ||||||||    
T  361048 aattttggcatttg 361035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 276
Target Start/End: Complemental strand, 32289473 - 32289370
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||| |||||||||||||| |||||| |||||||| |||||||||| |||||||||| |||||||  ||| || |||| ||||| ||||||||||||||    
T  32289473 gtctttgatgaagtggtaattcactgataataaacttacacacaactgtgaggtctcgagttcgaattcggatcacaacatccgg-cttgcaatttcggc 32289375  T
Q  272 atttg 276  Q
    |||||    
T  32289374 atttg 32289370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 198 - 277
Target Start/End: Complemental strand, 11572110 - 11572031
Alignment:
Q  198 aaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgt 277  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||| | ||||| |||||| ||||||| ||||||||    
T  11572110 aaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtctggccttacaatttctgcatttgt 11572031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 278
Target Start/End: Complemental strand, 12252150 - 12252045
Alignment:
Q  173 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 272  Q
    ||||| |||||||||||| ||| | ||| ||||||||||||||||| ||||||||||||||| ||||| |||| | || ||||| |||||||| |||| |    
T  12252150 tcttaaatgaagtggtaagccattaaaattaaactcacacacaactatgaggtctcgggttcaaaccctggtcacgacatccggtcttgcaatctcggta 12252051  T
Q  273 tttgtc 278  Q
    ||||||    
T  12252050 tttgtc 12252045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 28592119 - 28592188
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggt 232  Q
    ||||| || ||||||||| || |||||||||| ||||||||||||||||||||||| |||||||| ||||    
T  28592119 tttttttttgtcttagataaattggtaatccattgaaaataaactcacacacaactgtgaggtcttgggt 28592188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 276
Target Start/End: Original strand, 584776 - 584887
Alignment:
Q  164 ttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgca 263  Q
    |||| ||||||||| ||||||||| ||||| ||||||  ||||||||| | || | ||||||| ||  |||||| ||||||| | ||||||| |||||||    
T  584776 tttttttggtcttatatgaagtggcaatcctctgaaatcaaactcacataaaattgtgaggtcccgaattcgaatccgggtcacgacgtccg-ccttgca 584874  T
Q  264 atttcggcatttg 276  Q
    |||||||||||||    
T  584875 atttcggcatttg 584887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 278
Target Start/End: Original strand, 32353932 - 32354046
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||| || |||||||| | ||||||||||||||||||||||| ||| ||| |  ||||||| ||| ||| ||||||||| ||||      
T  32353932 tttttttttgtcttagataaaatggtaatcaattgaaaataaactcacacacaactgtgaagtc-ccagttcgaatccgagtcacaacgtccgacctttg 32354030  T
Q  263 aatttcggcatttgtc 278  Q
    ||||| ||||||||||    
T  32354031 aattttggcatttgtc 32354046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 278
Target Start/End: Original strand, 10999416 - 10999514
Alignment:
Q  180 tgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 278  Q
    ||||||||||||||||||||| |||||||||| |||||| |||| | | || |||| ||| || || |  |||||| ||||||| ||||||||||||||    
T  10999416 tgaagtggtaatccactgaaattaaactcacatacaactgtgagattttggattcgtacctggatcacttcgtccgaccttgcagtttcggcatttgtc 10999514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 7014313 - 7014380
Alignment:
Q  175 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgg 242  Q
    ||||||||||||||||| |||||||| |||||||||| | || | |||||| ||||||||||| ||||    
T  7014313 ttagatgaagtggtaatacactgaaattaaactcacataaaattatgaggtttcgggttcgaatccgg 7014380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 11456101 - 11456047
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtc 226  Q
    ||||||||||||||||||||| |||  |||||||||||||||||| | |||||||    
T  11456101 gtcttagatgaagtggtaatcgactagaaataaactcacacacaattatgaggtc 11456047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 22576318 - 22576244
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaa 237  Q
    ||||| || |||||||| ||||||||||| || |||||  ||||||||||| |||| ||||||  ||||||||||    
T  22576318 tttttttttgtcttagaagaagtggtaatacaatgaaatcaaactcacacataactgtgaggttccgggttcgaa 22576244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 172 - 278
Target Start/End: Complemental strand, 22291 - 22185
Alignment:
Q  172 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 271  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||| |||| ||||||||||||| | |||||||||||| ||||||||||    
T  22291 gtcttagatgaagtggtaatccactgaaattaaactcacacgcaactgtgaggtcccgggctcgaacccgggtcacgacgtccggccttacaatttcggc 22192  T
Q  272 atttgtc 278  Q
    |||||||    
T  22191 atttgtc 22185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 114389 - 114276
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || ||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||| ||||||||||||||| ||   |||||||||||| |    
T  114389 tttttttttgtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttac 114290  T
Q  263 aatttcggcatttg 276  Q
    ||||||||||||||    
T  114289 aatttcggcatttg 114276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 34956 - 34842
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaat-aaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttg 261  Q
    ||||| |||||||||||||||||||||||||||||||| | ||||||||| ||||||  ||||||  || |||||||||  ||| | |||||||||||||    
T  34956 ttttttttggtcttagatgaagtggtaatccactgaaattaaaactcacatacaactgcgaggtcctggattcgaacccatgtcacgacgtccggccttg 34857  T
Q  262 caatttcggcatttg 276  Q
    |||||||||||||||    
T  34856 caatttcggcatttg 34842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 275
Target Start/End: Original strand, 8934 - 9046
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    ||||| || |||||||||||||||||||  |||||||| ||||||||||||||||| |||||||   ||||||||||||  ||  ||||||| ||||| |    
T  8934 tttttttttgtcttagatgaagtggtaaatcactgaaattaaactcacacacaactgtgaggtcctaggttcgaacccgaatcataacgtcccgccttac 9033  T
Q  263 aatttcggcattt 275  Q
    |||||||||||||    
T  9034 aatttcggcattt 9046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 278
Target Start/End: Complemental strand, 14632 - 14517
Alignment:
Q  173 tcttagatgaagtggtaatccactgaaaataaactcacacaca--------actctg--aggtctcgggttcgaacccgggtctcaacgtccggccttgc 262  Q
    |||||||| ||||||||||||||||||| ||||||||||||||        ||||||  ||||| ||||||||||||||| || | ||||||||||||||    
T  14632 tcttagattaagtggtaatccactgaaattaaactcacacacacatctgtgactctgtgaggtcccgggttcgaacccggatcacgacgtccggccttgc 14533  T
Q  263 aatttcggcatttgtc 278  Q
    ||||||| ||||||||    
T  14532 aatttcgacatttgtc 14517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 4455 - 4413
Alignment:
Q  163 tttttgttggtcttagatgaagtggtaatccactgaaaataaa 205  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  4455 ttttttttggtcttagatgaagtggtaatccactgaaaataaa 4413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 278
Target Start/End: Complemental strand, 50035 - 50006
Alignment:
Q  249 acgtccggccttgcaatttcggcatttgtc 278  Q
    ||||||||||||||||||||||||||||||    
T  50035 acgtccggccttgcaatttcggcatttgtc 50006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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