View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11383_high_2 (Length: 511)

Name: NF11383_high_2
Description: NF11383
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11383_high_2
NF11383_high_2
[»] chr7 (35 HSPs)
chr7 (295-493)||(49010221-49010420)
chr7 (21-203)||(29706602-29706781)
chr7 (237-296)||(29706877-29706936)
chr7 (309-492)||(38637878-38638061)
chr7 (309-492)||(43183964-43184147)
chr7 (309-466)||(37001736-37001892)
chr7 (309-492)||(3113616-3113799)
chr7 (309-492)||(5555952-5556135)
chr7 (303-470)||(14776594-14776761)
chr7 (309-492)||(33686051-33686234)
chr7 (309-466)||(8867227-8867383)
chr7 (309-492)||(40919517-40919700)
chr7 (241-295)||(29701543-29701597)
chr7 (370-490)||(7003215-7003336)
chr7 (370-490)||(7049086-7049207)
chr7 (309-466)||(26625260-26625416)
chr7 (309-492)||(36631306-36631488)
chr7 (295-386)||(8722827-8722917)
chr7 (370-492)||(11020585-11020708)
chr7 (306-455)||(23582494-23582642)
chr7 (370-492)||(34388636-34388759)
chr7 (309-428)||(36658721-36658839)
chr7 (75-126)||(41172215-41172266)
chr7 (371-492)||(20606113-20606235)
chr7 (233-295)||(31894257-31894319)
chr7 (309-470)||(8394638-8394797)
chr7 (233-302)||(44307603-44307672)
chr7 (306-406)||(31252295-31252394)
chr7 (378-492)||(13072424-13072539)
chr7 (233-295)||(31894539-31894601)
chr7 (233-294)||(1511190-1511251)
chr7 (237-300)||(1511475-1511538)
chr7 (237-296)||(10878623-10878682)
chr7 (237-299)||(28408529-28408591)
chr7 (356-465)||(20609434-20609542)
[»] chr6 (17 HSPs)
chr6 (21-205)||(21424368-21424549)
chr6 (308-458)||(23217452-23217600)
chr6 (237-294)||(21424643-21424700)
chr6 (309-492)||(28997218-28997401)
chr6 (309-492)||(34948277-34948460)
chr6 (306-488)||(28931501-28931683)
chr6 (303-470)||(399130-399297)
chr6 (241-297)||(21419308-21419364)
chr6 (370-492)||(29743773-29743896)
chr6 (370-492)||(33228891-33229014)
chr6 (237-294)||(10026140-10026197)
chr6 (309-406)||(13838376-13838472)
chr6 (237-297)||(10027124-10027184)
chr6 (306-470)||(10231812-10231975)
chr6 (237-299)||(33595608-33595670)
chr6 (233-293)||(3218152-3218212)
chr6 (237-305)||(3922827-3922895)
[»] chr8 (37 HSPs)
chr8 (21-203)||(14161218-14161397)
chr8 (306-493)||(9175621-9175808)
chr8 (309-492)||(42231425-42231608)
chr8 (309-492)||(3648288-3648471)
chr8 (309-492)||(9877708-9877891)
chr8 (237-297)||(14161495-14161555)
chr8 (370-492)||(7278511-7278634)
chr8 (309-492)||(378912-379094)
chr8 (307-465)||(19104-19262)
chr8 (309-492)||(2728689-2728872)
chr8 (309-492)||(16787521-16787704)
chr8 (317-492)||(34136305-34136480)
chr8 (303-470)||(39915027-39915194)
chr8 (370-492)||(4404496-4404619)
chr8 (241-295)||(14156163-14156217)
chr8 (297-485)||(29351857-29352045)
chr8 (308-405)||(32539972-32540068)
chr8 (309-492)||(3435734-3435917)
chr8 (308-464)||(40401001-40401156)
chr8 (309-464)||(23402625-23402779)
chr8 (370-428)||(29727938-29727996)
chr8 (233-302)||(20178363-20178432)
chr8 (233-302)||(20223091-20223160)
chr8 (336-465)||(33639154-33639282)
chr8 (339-465)||(15541743-15541868)
chr8 (370-490)||(32964064-32964185)
chr8 (295-458)||(29892039-29892198)
chr8 (371-455)||(35852495-35852579)
chr8 (237-300)||(14577154-14577217)
chr8 (309-455)||(17479956-17480101)
chr8 (236-298)||(30928309-30928371)
chr8 (237-299)||(35482990-35483052)
chr8 (391-492)||(40470118-40470220)
chr8 (235-292)||(17844167-17844224)
chr8 (237-294)||(30928601-30928658)
chr8 (237-297)||(27912386-27912446)
chr8 (237-297)||(27958805-27958865)
[»] chr1 (24 HSPs)
chr1 (303-491)||(41971746-41971935)
chr1 (303-492)||(3829471-3829659)
chr1 (309-492)||(11957845-11958028)
chr1 (309-492)||(35908016-35908199)
chr1 (370-492)||(7433910-7434033)
chr1 (309-468)||(32981551-32981709)
chr1 (309-492)||(17445782-17445965)
chr1 (370-470)||(42310495-42310595)
chr1 (370-492)||(23313483-23313606)
chr1 (390-483)||(32944405-32944499)
chr1 (73-126)||(19832206-19832259)
chr1 (335-428)||(28463490-28463582)
chr1 (237-297)||(12115240-12115300)
chr1 (378-465)||(5715373-5715460)
chr1 (411-470)||(7350228-7350287)
chr1 (370-465)||(42412370-42412464)
chr1 (390-464)||(18716322-18716396)
chr1 (391-492)||(33490194-33490296)
chr1 (233-296)||(7113863-7113926)
chr1 (237-300)||(19897170-19897233)
chr1 (240-295)||(40290073-40290128)
chr1 (237-299)||(17611713-17611775)
chr1 (233-299)||(25780173-25780239)
chr1 (370-455)||(3604778-3604863)
[»] chr3 (30 HSPs)
chr3 (306-417)||(8257407-8257517)
chr3 (338-489)||(27935667-27935818)
chr3 (309-470)||(40081235-40081395)
chr3 (309-492)||(6930389-6930572)
chr3 (303-470)||(6268913-6269080)
chr3 (303-470)||(22967931-22968098)
chr3 (339-470)||(29564674-29564810)
chr3 (370-492)||(19565056-19565179)
chr3 (309-492)||(5135776-5135959)
chr3 (309-492)||(11017765-11017948)
chr3 (309-492)||(45183469-45183651)
chr3 (370-492)||(45336362-45336485)
chr3 (303-456)||(39772318-39772470)
chr3 (309-492)||(34083615-34083797)
chr3 (309-466)||(6503065-6503221)
chr3 (370-470)||(19390659-19390760)
chr3 (370-466)||(33041467-33041561)
chr3 (237-296)||(52091714-52091773)
chr3 (237-295)||(52090881-52090939)
chr3 (295-392)||(3159292-3159388)
chr3 (233-298)||(3612591-3612656)
chr3 (390-465)||(7468824-7468899)
chr3 (237-300)||(5048383-5048446)
chr3 (306-353)||(16094646-16094693)
chr3 (236-299)||(44506331-44506394)
chr3 (233-295)||(17574372-17574434)
chr3 (233-299)||(22975629-22975695)
chr3 (370-491)||(27912493-27912615)
chr3 (237-297)||(8851801-8851861)
chr3 (237-301)||(28830041-28830105)
[»] chr4 (45 HSPs)
chr4 (309-492)||(28876810-28876993)
chr4 (309-492)||(3292392-3292575)
chr4 (338-492)||(29995507-29995661)
chr4 (309-492)||(6235998-6236181)
chr4 (309-492)||(6689731-6689914)
chr4 (370-492)||(10352439-10352562)
chr4 (309-492)||(42333270-42333453)
chr4 (309-470)||(33135940-33136100)
chr4 (303-470)||(13012701-13012868)
chr4 (303-470)||(20129826-20129993)
chr4 (303-470)||(26438766-26438933)
chr4 (303-470)||(34406771-34406938)
chr4 (309-492)||(35546441-35546623)
chr4 (309-492)||(43143080-43143263)
chr4 (303-470)||(43356417-43356584)
chr4 (303-470)||(47501286-47501453)
chr4 (309-428)||(17510723-17510841)
chr4 (335-470)||(29134152-29134286)
chr4 (370-492)||(30077191-30077314)
chr4 (370-464)||(30216301-30216395)
chr4 (309-466)||(25931225-25931381)
chr4 (309-492)||(48989817-48990000)
chr4 (371-458)||(26546856-26546943)
chr4 (303-492)||(36381836-36382024)
chr4 (309-428)||(13390943-13391061)
chr4 (237-300)||(21360451-21360514)
chr4 (233-300)||(30055488-30055555)
chr4 (341-468)||(48130491-48130617)
chr4 (335-465)||(56225820-56225950)
chr4 (309-492)||(30110451-30110634)
chr4 (308-458)||(13502113-13502261)
chr4 (309-423)||(44157182-44157295)
chr4 (314-419)||(49062453-49062557)
chr4 (237-293)||(30799612-30799668)
chr4 (303-406)||(26449291-26449393)
chr4 (322-465)||(31853743-31853885)
chr4 (237-300)||(37872761-37872824)
chr4 (370-417)||(40529651-40529698)
chr4 (233-300)||(46143555-46143622)
chr4 (370-428)||(50204643-50204702)
chr4 (237-299)||(13294891-13294953)
chr4 (237-295)||(25297679-25297737)
chr4 (372-492)||(4038262-4038383)
chr4 (234-294)||(30055208-30055268)
chr4 (233-297)||(42856801-42856865)
[»] chr5 (34 HSPs)
chr5 (309-491)||(15959441-15959623)
chr5 (370-468)||(23034488-23034586)
chr5 (309-470)||(31501214-31501374)
chr5 (309-492)||(13818467-13818650)
chr5 (309-492)||(31680855-31681038)
chr5 (309-492)||(33430809-33430992)
chr5 (371-492)||(192395-192517)
chr5 (309-492)||(39657022-39657208)
chr5 (303-470)||(26282805-26282972)
chr5 (303-470)||(36293108-36293275)
chr5 (337-428)||(38268944-38269034)
chr5 (309-470)||(16333395-16333555)
chr5 (370-463)||(37255123-37255216)
chr5 (309-492)||(1775871-1776053)
chr5 (391-471)||(28801711-28801791)
chr5 (370-493)||(31271894-31272018)
chr5 (370-492)||(36291859-36291982)
chr5 (370-492)||(43069345-43069468)
chr5 (309-470)||(17332115-17332275)
chr5 (390-470)||(10034415-10034495)
chr5 (370-466)||(12278412-12278508)
chr5 (295-468)||(16155510-16155683)
chr5 (306-492)||(24792905-24793096)
chr5 (335-453)||(30297492-30297606)
chr5 (237-305)||(35362206-35362274)
chr5 (303-470)||(39435209-39435376)
chr5 (237-294)||(27843023-27843080)
chr5 (346-465)||(8788334-8788452)
chr5 (237-296)||(15179078-15179137)
chr5 (237-296)||(32994443-32994502)
chr5 (370-491)||(27750724-27750846)
chr5 (237-295)||(32458075-32458133)
chr5 (237-299)||(35363278-35363340)
chr5 (237-294)||(19558161-19558218)
[»] scaffold0069 (1 HSPs)
scaffold0069 (303-470)||(18071-18238)
[»] chr2 (30 HSPs)
chr2 (338-493)||(45121696-45121851)
chr2 (309-492)||(45419071-45419254)
chr2 (295-492)||(7072016-7072213)
chr2 (309-492)||(4554689-4554871)
chr2 (303-470)||(17444528-17444695)
chr2 (309-492)||(35963180-35963363)
chr2 (303-470)||(41251121-41251288)
chr2 (319-458)||(18829380-18829518)
chr2 (370-492)||(18982079-18982202)
chr2 (370-492)||(31581175-31581298)
chr2 (303-470)||(6403291-6403458)
chr2 (309-492)||(26162198-26162381)
chr2 (309-492)||(32126683-32126866)
chr2 (370-492)||(2957700-2957823)
chr2 (370-492)||(12756393-12756516)
chr2 (371-492)||(37621618-37621740)
chr2 (309-492)||(2286278-2286460)
chr2 (306-465)||(26591559-26591716)
chr2 (370-470)||(42442497-42442597)
chr2 (237-296)||(8322471-8322530)
chr2 (391-492)||(26238429-26238531)
chr2 (371-444)||(17373394-17373467)
chr2 (341-428)||(8058871-8058957)
chr2 (237-300)||(27360410-27360473)
chr2 (237-297)||(30337717-30337777)
chr2 (398-492)||(44084185-44084280)
chr2 (237-295)||(17846007-17846065)
chr2 (237-294)||(30337424-30337481)
chr2 (370-442)||(816613-816685)
chr2 (392-456)||(25391505-25391568)
[»] scaffold0134 (1 HSPs)
scaffold0134 (308-487)||(17800-17978)
[»] scaffold0041 (1 HSPs)
scaffold0041 (309-492)||(53395-53578)
[»] scaffold0002 (2 HSPs)
scaffold0002 (303-470)||(479944-480111)
scaffold0002 (237-297)||(330194-330254)
[»] scaffold0166 (1 HSPs)
scaffold0166 (306-492)||(35288-35479)
[»] scaffold0831 (1 HSPs)
scaffold0831 (336-447)||(3411-3521)
[»] scaffold0495 (1 HSPs)
scaffold0495 (306-470)||(8532-8695)
[»] scaffold0311 (1 HSPs)
scaffold0311 (237-297)||(12885-12945)
[»] scaffold0029 (1 HSPs)
scaffold0029 (237-297)||(136913-136973)
[»] scaffold0347 (2 HSPs)
scaffold0347 (233-294)||(11940-12001)
scaffold0347 (238-295)||(12223-12280)


Alignment Details
Target: chr7 (Bit Score: 160; Significance: 5e-85; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 295 - 493
Target Start/End: Complemental strand, 49010420 - 49010221
Alignment:
Q  295 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaa 394  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||    
T  49010420 taaaaacgatttgcaaagttttatagcatttcaatgacgattctatttatttttatttttaaacaaaaacgtgcaaaaattgaaattttgttcctaataa 49010321  T
Q  395 gcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgagag 493  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  49010320 gcgtatactcacaggtcaaatttcgttccctaattttataagcatggttagaacataataagaatcttcacaatgaagttttgcaatttttaaacgagag 49010221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 29706602 - 29706781
Alignment:
Q  21 ctcgcgtgaacaggttacgtcccccagaaatgaaggaaccgaaaaatgattgtgtgtgtgaaccttgtgtgcgtgaggatgccatgaattttgagatttg 120  Q
    |||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29706602 ctcgcgtgaacaggttgcgtcccccagaaatgaaagaaccggaaaatgattgtgtgtgtgaaccttgtgtgcgtaaggatgccatgaattttgagatttg 29706701  T
Q  121 attttttagggttcttgcaggttgaagggtgactgagaagaagaagcttgtgtgaacattggagaagatgaacataaagttaa 203  Q
    |||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||| |||||||||||||||| |||||    
T  29706702 attttttagggttcttgcaggttgaagggtgattg---agaagaagcttgtgtgaacattagagaagatgaacataacgttaa 29706781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 237 - 296
Target Start/End: Original strand, 29706877 - 29706936
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29706877 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 29706936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 38637878 - 38638061
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  38637878 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 38637976  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| || | ||||| ||| |||||||||||    
T  38637977 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaatttttgtagtctttaaacgaga 38638061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 43183964 - 43184147
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  43183964 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 43184062  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| || | ||||| ||| |||||||||||    
T  43184063 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgaga 43184147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 309 - 466
Target Start/End: Original strand, 37001736 - 37001892
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  37001736 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaatgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 37001834  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcaca 466  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||    
T  37001835 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcaca 37001892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 3113616 - 3113799
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| ||||||| || | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  3113616 aaagtttcatagcatatcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 3113714  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||||||| | ||||| |||||||||| | ||||| | |||||||||||||    
T  3113715 gtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatgaaattttgtaatttttaaacgaga 3113799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 5556135 - 5555952
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| ||| ||| |||| | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  5556135 aaagtttcataacatatcaaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 5556037  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||||||| | ||||| |||||||||| | ||||| | |||||||||||||    
T  5556036 gtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatgaaattttgtaatttttaaacgaga 5555952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 303 - 470
Target Start/End: Original strand, 14776594 - 14776761
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||||| | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  14776594 atttgtaaagtttcatagcatttcaaagtcgtttaaatttattttaatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 14776692  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatga 470  Q
    ||||  ||||||||| |||||||||| || || |||||  ||||| || ||||||| | ||||||||||    
T  14776693 tcacaagtcaaatttagttccctaattttgtaggcatgactagaatatgataagaaacattcacaatga 14776761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 33686234 - 33686051
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||  | | || || |||||||||| |||||  ||| ||||  ||||||| || ||||||||||||  ||||||||||||||||      
T  33686234 aaagtttcatagcattttgaagtcgtttaaatttattttgatttttcaaccaaaacatgcaaaa-ttaaaattttgttccgcgtaagcgtatactcacaa 33686136  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaat-gagttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||| | || || |||||  |||||||| |||||||||||||||||  | ||||| |||||||||||||||    
T  33686135 gtcaaatttagttccctacttttgtaggcatgactagaacatgataagaatcttcacaataaaattttgtagtttttaaacgaga 33686051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 466
Target Start/End: Original strand, 8867227 - 8867383
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || |  |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  8867227 aaagtttcatagcatttcgaagtcgttaaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 8867325  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcaca 466  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||    
T  8867326 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcaca 8867383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 40919517 - 40919700
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||      
T  40919517 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaa 40919615  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| || | ||||| ||| |||||||||||    
T  40919616 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgaga 40919700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 241 - 295
Target Start/End: Complemental strand, 29701597 - 29701543
Alignment:
Q  241 aggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 295  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  29701597 aggacgaaaacgttacctaaaaataagttataggaccatttgtgtaattttgcct 29701543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 370 - 490
Target Start/End: Complemental strand, 7003336 - 7003215
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    |||||||||||||||||||  ||||||||||||| ||  ||||| ||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  7003336 aaaattgaaattttgttccgtgtaagcgtatactaacaagtcaagtttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 7003237  T
Q  470 -agttttgcagtttttaaacga 490  Q
     | ||||| ||| |||||||||    
T  7003236 aaattttgtagtctttaaacga 7003215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 370 - 490
Target Start/End: Complemental strand, 7049207 - 7049086
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    |||||||||||||||||||  ||||||||||||| ||  ||||| ||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  7049207 aaaattgaaattttgttccgtgtaagcgtatactaacaagtcaagtttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 7049108  T
Q  470 -agttttgcagtttttaaacga 490  Q
     | ||||| ||| |||||||||    
T  7049107 aaattttgtagtctttaaacga 7049086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 309 - 466
Target Start/End: Complemental strand, 26625416 - 26625260
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | |  | || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  26625416 aaagtttcatagcatttcgaagttgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 26625318  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcaca 466  Q
    || |||||| |||||||||| || || |||||  |||||||| ||||||| |||||||    
T  26625317 gttaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcaca 26625260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 36631488 - 36631306
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  36631488 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 36631390  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    | ||||||| |||| ||||| || || |||||  |||||||| |||||||  ||||||||| | ||||| | |||||||||||||    
T  36631389 g-caaatttagttctctaattttgtaggcatgactagaacatgataagaactttcacaatgaaattttgtaatttttaaacgaga 36631306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 295 - 386
Target Start/End: Original strand, 8722827 - 8722917
Alignment:
Q  295 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgtt 386  Q
    |||||| |||||||||||||| |||||||||| |  |||||||||||||||||||||||  ||| |||  |||| |||||||||||||||||    
T  8722827 taaaaataatttgcaaagtttcatagcatttcgaatacgattcaatttatttttatttttcaaccaaaccgtgc-aaaattgaaattttgtt 8722917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 370 - 492
Target Start/End: Original strand, 11020585 - 11020708
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    |||||||||||||||||||  ||||||||||| |||   ||||||||| ||||||||||||| || |||||  ||||  || ||||||| |||||||| |    
T  11020585 aaaattgaaattttgttccgcgtaagcgtataatcataagtcaaatttagttccctaatcttgtaggcatgactagacaatgataagaaccttcacaacg 11020684  T
Q  470 -agttttgcagtttttaaacgaga 492  Q
     | ||||| |||||||||||||||    
T  11020685 aaattttggagtttttaaacgaga 11020708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 455
Target Start/End: Complemental strand, 23582642 - 23582494
Alignment:
Q  306 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 405  Q
    ||||||||||| ||||| ||||| |||  ||| ||||||||| |||||  ||| ||||  ||| ||| ||| ||||||||||| |||||| ||||| |||    
T  23582642 tgcaaagttttgtagcaattcaaagacatttctatttattttaatttttcaactaaaacttgctaaa-ttgcaattttgttccgagtaagagtataatca 23582544  T
Q  406 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataa 455  Q
    | |||||||||| |||  ||||| || || ||||||||||||||| ||||    
T  23582543 cgggtcaaattttgttatctaattttttaggcatggttagaacatcataa 23582494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 492
Target Start/End: Original strand, 34388636 - 34388759
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    |||||||||||||||||||  |||||| |||| ||||  ||||||||| |||||||||| || || |||||  | |||||| ||||||| ||||||| ||    
T  34388636 aaaattgaaattttgttccgcgtaagcatatattcacaagtcaaatttagttccctaattttgtaggcatgactggaacatgataagaaccttcacagtg 34388735  T
Q  470 -agttttgcagtttttaaacgaga 492  Q
     | ||||| ||| |||||||||||    
T  34388736 aaattttgtagtctttaaacgaga 34388759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 428
Target Start/End: Complemental strand, 36658839 - 36658721
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  36658839 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 36658741  T
Q  409 gtcaaatttcgttccctaat 428  Q
    || ||||||  |||||||||    
T  36658740 gtgaaatttaattccctaat 36658721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 41172215 - 41172266
Alignment:
Q  75 tgtgtgaaccttgtgtgcgtgaggatgccatgaattttgagatttgattttt 126  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  41172215 tgtgtgaaccttgtgtgcgtgaggatgccatggatttcaagatttgattttt 41172266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 492
Target Start/End: Complemental strand, 20606235 - 20606113
Alignment:
Q  371 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg- 469  Q
    |||||| ||||||||||| ||||||| |||||| || | ||||||||||||   ||||  | || ||||||||||||||| ||||||| |||||| |||     
T  20606235 aaattgcaattttgttccgagtaagcatatactgacggatcaaatttcgttatataattctgtaggcatggttagaacatgataagaaccttcaccatga 20606136  T
Q  470 agttttgcagtttttaaacgaga 492  Q
    | ||||| |||||||||| ||||    
T  20606135 aattttgaagtttttaaatgaga 20606113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 233 - 295
Target Start/End: Complemental strand, 31894319 - 31894257
Alignment:
Q  233 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 295  Q
    |||||||||||||||||  ||||||||||| ||||||| ||||| |||| |||||||||||||    
T  31894319 aaaaataaaggacgaaagtgttacctaaaattaagttaagggactatttgtgtaattttgcct 31894257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 309 - 470
Target Start/End: Complemental strand, 8394797 - 8394638
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||| ||| |||||||||||||||  ||||||||||||||||      
T  8394797 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgccaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 8394699  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 470  Q
    |  |||||| |||||||||| || || |||||  |||||||| ||||||| |||||| ||||    
T  8394698 g-aaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacgatga 8394638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 44307672 - 44307603
Alignment:
Q  233 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaaca 302  Q
    |||||||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||| ||||||    
T  44307672 aaaaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccttaaaaca 44307603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 406
Target Start/End: Original strand, 31252295 - 31252394
Alignment:
Q  306 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 405  Q
    |||||||||| ||| ||||||||||| | |||||||||||||||||||  ||  |||| ||||  |||||| ||||||||||| || ||||||||| |||    
T  31252295 tgcaaagtttcataacatttcaatgatgtttcaatttatttttatttttgaatcaaaacgtgc-taaattgcaattttgttccgagcaagcgtatattca 31252393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 492
Target Start/End: Original strand, 13072424 - 13072539
Alignment:
Q  378 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttg 476  Q
    ||||||||||  ||||||||||||||||| |||||||||| |||| ||||| ||  | | ||| |||||| || ||||||| |||||| ||| | |||||    
T  13072424 aattttgttcagagtaagcgtatactcacgggtcaaattttgttctctaattttggaggtatgtttagaatatcataagaaccttcaccatgaaattttg 13072523  T
Q  477 cagtttttaaacgaga 492  Q
     || ||||||||||||    
T  13072524 gagattttaaacgaga 13072539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 295
Target Start/End: Original strand, 31894539 - 31894601
Alignment:
Q  233 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 295  Q
    |||||||||||||||||| |||| |||||| ||||||| ||||| | || |||||||||||||    
T  31894539 aaaaataaaggacgaaaatgttatctaaaattaagttaagggactaattgtgtaattttgcct 31894601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 233 - 294
Target Start/End: Complemental strand, 1511251 - 1511190
Alignment:
Q  233 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 294  Q
    ||||||||||||||||||  |||||||||| ||||||| ||||| | || ||||||||||||    
T  1511251 aaaaataaaggacgaaaatattacctaaaattaagttaagggactaattgtgtaattttgcc 1511190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 300
Target Start/End: Original strand, 1511475 - 1511538
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 300  Q
    |||||||||||||  ||||||||||  ||||||| ||||| | || ||||||||||||||||||    
T  1511475 ataaaggacgaaagtgttacctaaatttaagttaagggactaattgtgtaattttgcctaaaaa 1511538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 296
Target Start/End: Complemental strand, 10878682 - 10878623
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 296  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||||    
T  10878682 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccta 10878623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 28408529 - 28408591
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 299  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  28408529 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 28408591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 465
Target Start/End: Complemental strand, 20609542 - 20609434
Alignment:
Q  356 aacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataa 455  Q
    |||||||| |||||||| | | |||||| |||| | ||||||||||||||| ||||||||| ||||   ||||  | || ||||||||||||||  ||||    
T  20609542 aacaaaaacgtgcaaaa-tagcaatttttttccgaataagcgtatactcacgggtcaaattccgttatataattctgtaggcatggttagaacaagataa 20609444  T
Q  456 gaatcttcac 465  Q
    ||| ||||||    
T  20609443 gaaccttcac 20609434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 1e-79; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 21424368 - 21424549
Alignment:
Q  21 ctcgcgtgaacaggttacgtcccccagaaatgaaggaaccgaaaaatgattgtgtgtgtgaaccttgtgtgcgtgaggatgccatgaattttgagatttg 120  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21424368 ctcgcgtgaacaggttgcgtcccccagaaatgaaagaaccgaaaaatgattgtgtgtgtgaaccttgtgtgcgtaaggatgccatgaattttgagatttg 21424467  T
Q  121 attttttagggttcttgcaggttgaagggtgactgagaagaagaagcttgtgtgaacattggagaagatgaacataaagttaaat 205  Q
    |||||||||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||| |||||||    
T  21424468 attttttagggttcttgcaggttgaagggtgattg---agaagaagcttgtgtgaacattggagaagatgaacataacgttaaat 21424549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 308 - 458
Target Start/End: Complemental strand, 23217600 - 23217452
Alignment:
Q  308 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 407  Q
    |||||||| ||| |||||| | || | || |||||||||||||||| || ||||| | || ||||||||||||||||||||||||||  ||||||||       
T  23217600 caaagtttcatatcatttcgaagatgttttaatttatttttatttttaaccaaaacg-tg-aaaaattgaaattttgttcctagtaattgtatactctta 23217503  T
Q  408 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaa 458  Q
    |||||||||||||||| |||| || || |||||||||||||||||||||||    
T  23217502 ggtcaaatttcgttccttaattttgtaggcatggttagaacataataagaa 23217452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 21424643 - 21424700
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21424643 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 21424700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 28997401 - 28997218
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  28997401 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaatgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 28997303  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||| || || | ||||| ||| |||||||||||    
T  28997302 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcgcagtgaaattttgtagtctttaaacgaga 28997218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 34948277 - 34948460
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| ||||||| || | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  34948277 aaagtttcatagcatatcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 34948375  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||||||| | ||||| |||||||||| | ||||| | |||||||||||||    
T  34948376 gtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatgaaattttgtaatttttaaacgaga 34948460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 488
Target Start/End: Complemental strand, 28931683 - 28931501
Alignment:
Q  306 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 405  Q
    ||||||||||  ||||||||||| |||  ||| ||||||||| |||||  ||| |||| |||| ||| ||| |||||||||||  ||||||||||||| |    
T  28931683 tgcaaagtttcgtagcatttcaaagacatttcgatttattttaatttttgaaccaaaatgtgcgaaa-ttgcaattttgttccgtgtaagcgtatactta 28931585  T
Q  406 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaac 488  Q
    | ||||||||||||||| ||||| || || ||||||||||||  | |||| ||||||||  ||| | ||||| |||||||||||    
T  28931584 cgggtcaaatttcgttctctaattttgtaggcatggttagaaggtcataacaatcttcaacatgcaattttgaagtttttaaac 28931501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 303 - 470
Target Start/End: Complemental strand, 399297 - 399130
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  399297 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 399199  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatga 470  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||    
T  399198 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatga 399130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 21419364 - 21419308
Alignment:
Q  241 aggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 297  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  21419364 aggacgaaaacgttacctaaaaataagttataggaccatttgtgtaattttgcctaa 21419308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 370 - 492
Target Start/End: Complemental strand, 29743896 - 29743773
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    |||||||||||||||||||  ||||| ||||||||||  |||||||||  ||||||||| || || ||||| || |||||| |||||||  |||||||||    
T  29743896 aaaattgaaattttgttccgcgtaagtgtatactcacaagtcaaatttaattccctaattttgtaggcatgattggaacatgataagaacattcacaatg 29743797  T
Q  470 -agttttgcagtttttaaacgaga 492  Q
     | ||||| |||||||||||||||    
T  29743796 aaattttgtagtttttaaacgaga 29743773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 370 - 492
Target Start/End: Original strand, 33228891 - 33229014
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    |||||||||||||||||||  ||||| ||| ||||||  ||||||||| |||||||||| ||  | |||||  |||||||| ||||||| ||||||||||    
T  33228891 aaaattgaaattttgttccgcgtaagtgtacactcacaagtcaaatttagttccctaattttgcaggcatgactagaacatgataagaaccttcacaatg 33228990  T
Q  470 -agttttgcagtttttaaacgaga 492  Q
     | ||||| |||||||||||||||    
T  33228991 aaattttgtagtttttaaacgaga 33229014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 10026197 - 10026140
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 294  Q
    ||||||||| |||||||||||||||| ||||||| ||||| |||| ||||||||||||    
T  10026197 ataaaggactaaaacgttacctaaaattaagttaagggactatttatgtaattttgcc 10026140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 309 - 406
Target Start/End: Complemental strand, 13838472 - 13838376
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcac 406  Q
    ||||||| ||| |||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||    
T  13838472 aaagtttcataacatttcgaagtcgtttaaatttattttgatttttcaactaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcac 13838376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 297
Target Start/End: Original strand, 10027124 - 10027184
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 297  Q
    ||||||||| |||| ||||||||||| ||||||| ||||| |||| ||||||| |||||||    
T  10027124 ataaaggaccaaaatgttacctaaaattaagttaagggactatttatgtaattatgcctaa 10027184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 470
Target Start/End: Complemental strand, 10231975 - 10231812
Alignment:
Q  306 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 405  Q
    |||||| ||| |||| ||||||| || | ||| |||| ||||||||||  ||| |||| |||  ||| ||| ||||||||||  ||||| | |||| |||    
T  10231975 tgcaaaatttcatagtatttcaaagatgtttcgatttctttttatttttcaaccaaaacgtgtgaaa-ttgcaattttgttctgagtaaacatatattca 10231877  T
Q  406 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 470  Q
    |  |||||||||||||  ||||| || || ||||||||||||||  ||||||| |||||| ||||    
T  10231876 cgagtcaaatttcgttttctaattttctaggcatggttagaacaacataagaaccttcaccatga 10231812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 33595608 - 33595670
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 299  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  33595608 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 33595670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 3218212 - 3218152
Alignment:
Q  233 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgc 293  Q
    |||||||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||    
T  3218212 aaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgc 3218152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 305
Target Start/End: Original strand, 3922827 - 3922895
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaacaatt 305  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||| ||||| ||||    
T  3922827 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgccaaaaaaaaatt 3922895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 1e-73; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 14161218 - 14161397
Alignment:
Q  21 ctcgcgtgaacaggttacgtcccccagaaatgaaggaaccgaaaaatgattgtgtgtgtgaaccttgtgtgcgtgaggatgccatgaattttgagatttg 120  Q
    |||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14161218 ctcgcgtgaacaggttgcgtcccccagaaatgaaagaaccggaaaatgattgtgtgtgtgaaccttgtgtgcgtaaggatgccatgaattttgagatttg 14161317  T
Q  121 attttttagggttcttgcaggttgaagggtgactgagaagaagaagcttgtgtgaacattggagaagatgaacataaagttaa 203  Q
    |||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||| |||||||||||||||| |||||    
T  14161318 attttttagggttcttgcaggttgaagggtgattg---agaagaagcttgtgtgaacattagagaagatgaacataacgttaa 14161397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 306 - 493
Target Start/End: Complemental strand, 9175808 - 9175621
Alignment:
Q  306 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 405  Q
    ||||||||||||||||||||| | || ||||| ||||  |||||||||  ||| |||| |||||||| || |||||||||||||||||||| | ||||||    
T  9175808 tgcaaagttttatagcatttcgaagatgattctattttattttatttttcaactaaaatgtgcaaaa-ttaaaattttgttcctagtaagcatttactca 9175710  T
Q  406 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgagag 493  Q
      |||||||||| |||||||||| || || |||  |||||||||||||||||  |||||| ||| ||||||||||||||||||||||||    
T  9175709 tgggtcaaattttgttccctaattttgtaggcaatgttagaacataataagatccttcactatgaagttttgcagtttttaaacgagag 9175621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 42231608 - 42231425
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    |||||||||||||||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  42231608 aaagttttatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 42231510  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||| ||| | ||||| | |||||||||||||    
T  42231509 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacgatgaaattttgtaatttttaaacgaga 42231425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 3648288 - 3648471
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| ||| |||||||| | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||      
T  3648288 aaagtttcataacatttcaaagtcgtttaaatttattttgatttttcaactaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaa 3648386  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||| | ||||| | |||||||||||||    
T  3648387 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgaga 3648471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 9877891 - 9877708
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  |||||| |||||||||      
T  9877891 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcatatactcacaa 9877793  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||| | ||||| ||| |||||||||||    
T  9877792 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtctttaaacgaga 9877708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 237 - 297
Target Start/End: Original strand, 14161495 - 14161555
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14161495 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 14161555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 370 - 492
Target Start/End: Complemental strand, 7278634 - 7278511
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  7278634 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 7278535  T
Q  470 -agttttgcagtttttaaacgaga 492  Q
     | ||||| ||| |||||||||||    
T  7278534 aaattttgtagtctttaaacgaga 7278511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 379094 - 378912
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || ||||||||||||| |||||  ||| |||| |||| ||||||||| ||||||||| |||||| |||||||||  |    
T  379094 aaagtttcatagcatttcgaagtcgtttcaatttattttaatttt-gaaccaaaacgtgc-aaaattgaatttttgttccgagtaagtgtatactcatag 378997  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaat-gagttttgcagtttttaaacgaga 492  Q
    |||||||||  ||||||||| ||  | |||||  |||||||| ||||||| |||||||||  | ||||| |||||||||||||||    
T  378996 gtcaaatttaattccctaattttgcaggcatgactagaacatgataagaaacttcacaataaaattttgtagtttttaaacgaga 378912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 307 - 465
Target Start/End: Complemental strand, 19262 - 19104
Alignment:
Q  307 gcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcac 406  Q
    ||||||||| ||||||||||||  | || |||||||| ||| |||||  | | ||||| | ||||| ||| ||||||||||| | ||| | |||||||||    
T  19262 gcaaagtttcatagcatttcaaaaatgactcaatttagtttgatttttcatccaaaagtttcaaaatttgcaattttgttccaaataaccatatactcac 19163  T
Q  407 tggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcac 465  Q
    ||||||||||| |||||||||| || |  |||||||||||| |  ||||||||||||||    
T  19162 tggtcaaattttgttccctaattttgtttgcatggttagaataccataagaatcttcac 19104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 2728689 - 2728872
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||| |||| || ||||| ||||||||||||||   ||||| ||||||||||      
T  2728689 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgttcaaaa-ttgaaattttgttctgcgtaagtgtatactcacaa 2728787  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    || |||||| |||||||||| ||||| |||||  |||||||| ||||||| ||||||| || | ||||  |||||||||||||||    
T  2728788 gttaaatttagttccctaattttataggcatgactagaacatgataagaaccttcacagtgaaattttatagtttttaaacgaga 2728872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 16787521 - 16787704
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  16787521 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 16787619  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||| ||| |||||||  |||||| || | ||||| ||| |||||||||||    
T  16787620 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaactttcacagtgaaattttgtagtctttaaacgaga 16787704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 317 - 492
Target Start/End: Original strand, 34136305 - 34136480
Alignment:
Q  317 atagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatt 416  Q
    |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||  ||||||||    
T  34136305 atagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaagtcaaatt 34136403  T
Q  417 tcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    | |||||||||| || || |||||  |||| ||| ||||||| ||||||| || | ||||| ||| |||||||||||    
T  34136404 tagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgaga 34136480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 303 - 470
Target Start/End: Complemental strand, 39915194 - 39915027
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  39915194 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 39915096  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatga 470  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||    
T  39915095 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatga 39915027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 370 - 492
Target Start/End: Complemental strand, 4404619 - 4404496
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||| ||| ||    
T  4404619 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaacctttacagtg 4404520  T
Q  470 -agttttgcagtttttaaacgaga 492  Q
     | ||||| ||| |||||||||||    
T  4404519 aaattttgtagtctttaaacgaga 4404496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 241 - 295
Target Start/End: Complemental strand, 14156217 - 14156163
Alignment:
Q  241 aggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 295  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  14156217 aggacgaaaacgttacctaaaaataagttataggaccatttgtgtaattttgcct 14156163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 297 - 485
Target Start/End: Complemental strand, 29352045 - 29351857
Alignment:
Q  297 aaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagc 396  Q
    |||| ||| |||||| |||  ||||||||||| |||| || ||||| ||||||||||  ||| |||| |||| ||| ||| ||||||||||||||||| |    
T  29352045 aaaaaaatctgcaaattttcgtagcatttcaaagacgttttaatttgtttttatttttcaaccaaaacgtgcgaaa-ttgcaattttgttcctagtaaac 29351947  T
Q  397 gtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgag-ttttgcagttttta 485  Q
    |||||||||   ||||||||  |||||||||  || || ||||||||||||||  |||| ||  ||||| ||||| ||||| ||||||||    
T  29351946 gtatactcatgagtcaaattatgttccctaactttgtaggcatggttagaacagcataaaaactttcaccatgagattttggagttttta 29351857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 405
Target Start/End: Original strand, 32539972 - 32540068
Alignment:
Q  308 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 405  Q
    |||||||| |||||||||| | |||| |||||||||||||||||||  ||| ||||  ||  ||||||||||||||||||||||||||| ||||||||    
T  32539972 caaagtttcatagcatttcgaagacgtttcaatttatttttatttttcaaccaaaacatg-taaaattgaaattttgttcctagtaagcatatactca 32540068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 3435917 - 3435734
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| ||| |||||||| | || || |||||||||| |||||  ||| |||| | |||||| | |||||||||||||  |||||| |||||||||      
T  3435917 aaagtttcataacatttcaaagtcgtttaaatttattttgatttttcaaccaaaacgcgcaaaact-gaaattttgttccgcgtaagcatatactcacaa 3435819  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaa-tgagttttgcagtttttaaacgaga 492  Q
    ||||||||| ||||||||||  | || |||||  |||||||| |||||||  ||||||| | | ||||| |||||||||||||||    
T  3435818 gtcaaatttagttccctaattatgtaggcatgactagaacatgataagaacattcacaattaaattttgtagtttttaaacgaga 3435734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 464
Target Start/End: Original strand, 40401001 - 40401156
Alignment:
Q  308 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 407  Q
    |||||||| ||| |||||  | |||| ||| |||||||||||||||  ||| ||||  | | ||||||| |||||| |||| |||||||||||||||||     
T  40401001 caaagtttcatatcattttgaagacgtttcgatttatttttatttttcaaccaaaacatac-aaaattgcaattttattccgagtaagcgtatactcaca 40401099  T
Q  408 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttca 464  Q
    | ||||||||| ||||||||| |||   |||| |||||||||| ||||||| |||||    
T  40401100 gctcaaatttcattccctaattttacgggcatagttagaacatcataagaaccttca 40401156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 309 - 464
Target Start/End: Complemental strand, 23402779 - 23402625
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| |   || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  |||||||||| |||||      
T  23402779 aaagtttcatagcatttcgaaatcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatgctcacaa 23402681  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttca 464  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||    
T  23402680 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttca 23402625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 29727938 - 29727996
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaat 428  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| ||||||||||    
T  29727938 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaat 29727996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 20178432 - 20178363
Alignment:
Q  233 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaaca 302  Q
    |||||||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||| ||||||    
T  20178432 aaaaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccttaaaaca 20178363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 20223160 - 20223091
Alignment:
Q  233 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaaca 302  Q
    |||||||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||| ||||||    
T  20223160 aaaaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccttaaaaca 20223091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 336 - 465
Target Start/End: Complemental strand, 33639282 - 33639154
Alignment:
Q  336 tcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataa 435  Q
    |||||||||||| |||||  ||| |||| |||| ||||||| ||||||  ||| ||||||| |||||||||   |||||||| |||||||||| || ||     
T  33639282 tcaatttattttgatttttcaaccaaaacgtgc-aaaattgcaatttttctccaagtaagcatatactcacacatcaaattttgttccctaattttgtag 33639184  T
Q  436 gcatggttagaacataataagaatcttcac 465  Q
    ||||||||| ||||| ||| |||| |||||    
T  33639183 gcatggttacaacattataggaatattcac 33639154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 465
Target Start/End: Original strand, 15541743 - 15541868
Alignment:
Q  339 atttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagca 438  Q
    ||||||||| |||||  |||||||| |||||||| || || ||||||||  | ||||| ||||||||   ||||||||  |||||||||| || ||  ||    
T  15541743 atttattttaattttccaacaaaaatgtgcaaaattttaa-ttttgttcacattaagcatatactcaggagtcaaattatgttccctaattttgtataca 15541841  T
Q  439 tggttagaacataataagaatcttcac 465  Q
    ||||||||||||| |||||| ||||||    
T  15541842 tggttagaacatagtaagaaccttcac 15541868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 490
Target Start/End: Original strand, 32964064 - 32964185
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttca-caat 468  Q
    ||||||| | ||||||||  ||||||| | || |||| ||||||||||||||||||||| || | |||||| ||| ||||| ||||| | ||||| || |    
T  32964064 aaaattgcatttttgttcagagtaagcatttaatcacgggtcaaatttcgttccctaattttgttagcatgtttataacatcataaggaccttcaccatt 32964163  T
Q  469 gagttttgcagtttttaaacga 490  Q
     ||||||  |||||||||||||    
T  32964164 aagttttagagtttttaaacga 32964185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 458
Target Start/End: Original strand, 29892039 - 29892198
Alignment:
Q  295 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaa 394  Q
    |||||| |||||||||| |||| ||||||||||| || | || ||||  ||||||||||  ||| |||| ||||  |||||| |||||||||   |||||    
T  29892039 taaaaagaatttgcaaaattttgtagcatttcaaagatg-tttaatt--tttttatttttcaaccaaaacgtgc-gaaattgcaattttgttatgagtaa 29892134  T
Q  395 gcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaa 458  Q
      |||||||||| ||||||||||| ||| ||||| || ||||||||  || ||||| |||||||    
T  29892135 atgtatactcacgggtcaaatttctttctctaattttctaagcatgtatataacatcataagaa 29892198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 455
Target Start/End: Original strand, 35852495 - 35852579
Alignment:
Q  371 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataa 455  Q
    |||||| ||||||||||| | |||||  ||||||||  || |||||| |||| ||||| ||||| ||||||||||||||| ||||    
T  35852495 aaattgcaattttgttccgaataagcaaatactcacgagtaaaattttgttctctaattttataggcatggttagaacatcataa 35852579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 300
Target Start/End: Original strand, 14577154 - 14577217
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 300  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || ||||||||||||||||||    
T  14577154 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaaa 14577217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 309 - 455
Target Start/End: Complemental strand, 17480101 - 17479956
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    |||||||||||||||||||   | | || |||||||||| |||||  ||| |||| |||  ||||||| |||||| |||  ||||| | |||||||||      
T  17480101 aaagttttatagcatttcataaaagcttgaatttattttgatttttcaaccaaaatgtg-taaaattgcaattttcttctgagtaaacatatactcacga 17480003  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataa 455  Q
    ||||||||| |||||||||| || || |||| ||| |||||| ||||    
T  17480002 gtcaaattttgttccctaattttgtaggcatagttggaacatcataa 17479956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 236 - 298
Target Start/End: Complemental strand, 30928371 - 30928309
Alignment:
Q  236 aataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaa 298  Q
    |||||||||| |||| ||||||||||| ||||||| ||||| | || |||||||||| |||||    
T  30928371 aataaaggacaaaaatgttacctaaaattaagttaagggactaattgtgtaattttgtctaaa 30928309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 35482990 - 35483052
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 299  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  35482990 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 35483052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 492
Target Start/End: Original strand, 40470118 - 40470220
Alignment:
Q  391 gtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacg 489  Q
    ||||||||||| ||||  | ||||||| |||||||||| || || |||||  || ||||| |||||||| ||||||||| | ||||| |||||||||| |    
T  40470118 gtaagcgtataatcacaaggcaaatttagttccctaattttgtaggcatgactaaaacatgataagaatattcacaatgaaattttgtagtttttaaatg 40470217  T
Q  490 aga 492  Q
    |||    
T  40470218 aga 40470220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 17844167 - 17844224
Alignment:
Q  235 aaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttg 292  Q
    |||||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||    
T  17844167 aaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttg 17844224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 30928601 - 30928658
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 294  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||    
T  30928601 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 30928658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 297
Target Start/End: Original strand, 27912386 - 27912446
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 297  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||    
T  27912386 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaa 27912446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 297
Target Start/End: Original strand, 27958805 - 27958865
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 297  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||    
T  27958805 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaa 27958865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 6e-32; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 303 - 491
Target Start/End: Original strand, 41971746 - 41971935
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaac-aaaaaggtgcaaaaattgaaattttgttcctagtaagcgtata 401  Q
    ||||| |||||||||||||||||||| | || || |||||||||| |||||  ||| ||||| |||||||| ||||||||||||||   |||||||||||    
T  41971746 atttgtaaagttttatagcatttcaaagtcgtttaaatttattttgatttttcaaccaaaaacgtgcaaaa-ttgaaattttgttcagcgtaagcgtata 41971844  T
Q  402 ctcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgag 491  Q
    ||||| ||||||||||  ||||||||| || || |||||  |||||||| ||||||| |||||||||| | ||||| ||||||||||||||    
T  41971845 ctcacaggtcaaatttaattccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtttttaaacgag 41971935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 492
Target Start/End: Complemental strand, 3829659 - 3829471
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||    
T  3829659 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 3829561  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgagttttgcagtttttaaacgaga 492  Q
    ||||  ||||||||| |||||||||  || || |||||  |||||||| ||||||| |||||||||||  |||| |||||||||||||||    
T  3829560 tcacaagtcaaatttagttccctaactttgtaggcatgactagaacatgataagaaccttcacaatgaaatttgtagtttttaaacgaga 3829471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 11957845 - 11958028
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||||||| |||||||| ||| |||||||||||   |||||||||||||||      
T  11957845 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaacaaaaacgtgcaaaa-ttgcaattttgttccgcataagcgtatactcacaa 11957943  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||   ||| ||||| || || ||||| ||||||||| ||||||| |||||||||| | ||||| |||||||||||||||    
T  11957944 gtcaaattcaattcactaattttctaggcatgattagaacatgataagaaccttcacaatgaaattttgtagtttttaaacgaga 11958028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 35908199 - 35908016
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| |   || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  35908199 aaagtttcatagcatttcgaaatcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 35908101  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| || | ||||| ||| |||||||||||    
T  35908100 gtcaaatttagttccctaattttgtatgcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgaga 35908016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 370 - 492
Target Start/End: Complemental strand, 7434033 - 7433910
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| | ||||| ||||||||||    
T  7434033 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatg 7433934  T
Q  470 -agttttgcagtttttaaacgaga 492  Q
     | ||||| | |||||||||||||    
T  7433933 aaattttgtaatttttaaacgaga 7433910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 468
Target Start/End: Original strand, 32981551 - 32981709
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||||||| |||||||| |||||||||||||||  |||||| | |||||||      
T  32981551 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaacaaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcatttactcacaa 32981649  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaat 468  Q
    ||||||||| |||||| ||| || || |||||  |||||||| ||||||| |||||||||    
T  32981650 gtcaaatttagttcccaaattttgtaggcatgactagaacatgataagaaccttcacaat 32981709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 17445965 - 17445782
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| ||| |||||| | | || || |||||||||| |||||  ||| ||||  ||||||| |||||||||||||||  ||||||||||||||||      
T  17445965 aaagtttcataacatttcgaagtcgtttaaatttattttgatttttcaaccaaaacttgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 17445867  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| ||||| |||| || || |||||  |||||||| ||||||| ||||| |||| | ||||| ||| |||||||||||    
T  17445866 gtcaaatttagttccttaattttgtaggcatgactagaacatgataagaaccttcataatgaaattttgtagtctttaaacgaga 17445782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 370 - 470
Target Start/End: Original strand, 42310495 - 42310595
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    ||||||||||||||||| |  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  42310495 aaaattgaaattttgtttcgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 42310594  T
Q  470 a 470  Q
    |    
T  42310595 a 42310595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 370 - 492
Target Start/End: Complemental strand, 23313606 - 23313483
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    ||||||||||||||||||   |||||||||||||||   ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  23313606 aaaattgaaattttgttctgcgtaagcgtatactcataagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 23313507  T
Q  470 -agttttgcagtttttaaacgaga 492  Q
     | ||||| | |||||||||||||    
T  23313506 aaattttgtaatttttaaacgaga 23313483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 390 - 483
Target Start/End: Complemental strand, 32944499 - 32944405
Alignment:
Q  390 agtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttt 483  Q
    ||||||| ||||||||||| |||||||| |||||||||| ||||||||||| ||||||||| |||||||  ||||| ||| ||||||| ||||||    
T  32944499 agtaagcatatactcactgatcaaattttgttccctaattttataagcatgcttagaacatcataagaacattcaccatgaagttttggagtttt 32944405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 19832206 - 19832259
Alignment:
Q  73 tgtgtgtgaaccttgtgtgcgtgaggatgccatgaattttgagatttgattttt 126  Q
    ||||||||||||||||||||||||||||||||||  |||  |||||||||||||    
T  19832206 tgtgtgtgaaccttgtgtgcgtgaggatgccatgtctttcaagatttgattttt 19832259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 335 - 428
Target Start/End: Complemental strand, 28463582 - 28463490
Alignment:
Q  335 ttcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaat 428  Q
    ||||||||||||| |||||  ||| ||||  ||||||| ||||||||||||||| | ||||||||||||||| ||||||| ||  |||||||||    
T  28463582 ttcaatttattttgatttttcaaccaaaacatgcaaaa-ttgaaattttgttccgaataagcgtatactcacaggtcaaaattaattccctaat 28463490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 297
Target Start/End: Original strand, 12115240 - 12115300
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 297  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | || |||||||||||||||    
T  12115240 ataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcctaa 12115300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 465
Target Start/End: Original strand, 5715373 - 5715460
Alignment:
Q  378 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcac 465  Q
    ||||||||||| ||||||  |||| ||||||||||||||| ||||  |||| || || ||||||||| ||||| ||||||| ||||||    
T  5715373 aattttgttccgagtaagtatatattcactggtcaaattttgttctataattttgtaggcatggttaaaacatcataagaaacttcac 5715460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 470
Target Start/End: Original strand, 7350228 - 7350287
Alignment:
Q  411 caaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 470  Q
    |||||||||||| ||||| || ||||||||||||||| || |||||||||||||| ||||    
T  7350228 caaatttcgttcactaattttgtaagcatggttagaatatcataagaatcttcaccatga 7350287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 465
Target Start/End: Complemental strand, 42412464 - 42412370
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcac 465  Q
    ||||||| ||||||||||| | || |||||||||||| |||||||||||||| ||||||  | ||   ||||||| ||||| ||||||||||||||    
T  42412464 aaaattgcaattttgttccgaata-gcgtatactcacaggtcaaatttcgtttcctaattctgtagatatggttaaaacatcataagaatcttcac 42412370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 464
Target Start/End: Original strand, 18716322 - 18716396
Alignment:
Q  390 agtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttca 464  Q
    ||||||| |||| |||| ||||||||||  ||||||||| |||||  |||||||||||||| ||||||| |||||    
T  18716322 agtaagcatatattcacgggtcaaattttattccctaattttatagacatggttagaacatcataagaaccttca 18716396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 492
Target Start/End: Complemental strand, 33490296 - 33490194
Alignment:
Q  391 gtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacg 489  Q
    |||||||||||| | |  ||||||||| |||||||||| || || |||||  |||||||| |||| || |||||||||| | ||||| ||||||||||||    
T  33490296 gtaagcgtatacccgcaagtcaaatttagttccctaattttgtaggcatgactagaacatgataataaccttcacaatgaaattttgtagtttttaaacg 33490197  T
Q  490 aga 492  Q
    |||    
T  33490196 aga 33490194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 7113926 - 7113863
Alignment:
Q  233 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 296  Q
    |||||||||||||||||  |||||||||||  |||||| ||||| | || ||||||||||||||    
T  7113926 aaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgccta 7113863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 300
Target Start/End: Complemental strand, 19897233 - 19897170
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 300  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | || | |||||||||| |||||    
T  19897233 ataaaggacgaaaatgttacctaaaattaagttaagggactaattgtataattttgccaaaaaa 19897170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 40290073 - 40290128
Alignment:
Q  240 aaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 295  Q
    ||||||||||| ||||||||||| ||||||| ||||| | || |||||||||||||    
T  40290073 aaggacgaaaatgttacctaaaattaagttaagggactaattatgtaattttgcct 40290128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 17611713 - 17611775
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 299  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  17611713 ataaaggacgaaagtgttacctaaaataaagttaagggactaattatgtaattttgcctaaaa 17611775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 233 - 299
Target Start/End: Original strand, 25780173 - 25780239
Alignment:
Q  233 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 299  Q
    |||||||||||||||||  |||||||||||  |||||| ||||| | || ||||||||| |||||||    
T  25780173 aaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttacctaaaa 25780239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 455
Target Start/End: Complemental strand, 3604863 - 3604778
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataa 455  Q
    |||||||  |||||||| | ||||||  ||||||||  ||||||||||  ||||||||| || || ||||||||||||||| ||||    
T  3604863 aaaattgctattttgtttcgagtaagtatatactcaagggtcaaattttattccctaattttgtaggcatggttagaacatcataa 3604778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 4e-30; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 306 - 417
Target Start/End: Complemental strand, 8257517 - 8257407
Alignment:
Q  306 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 405  Q
    |||||||||| |||||||||||| |||| |||||||||||||||||||  ||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  8257517 tgcaaagtttcatagcatttcaaagacgtttcaatttatttttatttttcaaccaaaacgtgcaaaa-ttgaaattttgttcctagtaagcgtatactca 8257419  T
Q  406 ctggtcaaattt 417  Q
    | | ||||||||    
T  8257418 cagatcaaattt 8257407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 338 - 489
Target Start/End: Complemental strand, 27935818 - 27935667
Alignment:
Q  338 aatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagc 437  Q
    |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| || || ||    
T  27935818 aatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttccctaattttgtaggc 27935720  T
Q  438 atggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacg 489  Q
    |||  |||||||| |||||||||||||||||| | ||||| ||||||||||||    
T  27935719 atgactagaacattataagaatcttcacaatgaaattttgtagtttttaaacg 27935667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 309 - 470
Target Start/End: Original strand, 40081235 - 40081395
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  40081235 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 40081333  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 470  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||    
T  40081334 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatga 40081395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 6930389 - 6930572
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  6930389 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 6930487  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||| | | ||||| ||| |||||||||||    
T  6930488 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaaggaaattttgtagtctttaaacgaga 6930572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 303 - 470
Target Start/End: Original strand, 6268913 - 6269080
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  6268913 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 6269011  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatga 470  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||    
T  6269012 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatga 6269080  T

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Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 303 - 470
Target Start/End: Original strand, 22967931 - 22968098
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  22967931 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 22968029  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatga 470  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||    
T  22968030 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatga 22968098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 339 - 470
Target Start/End: Original strand, 29564674 - 29564810
Alignment:
Q  339 atttatttttattttaaaac-aaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatt---tc--gttccctaatctta 432  Q
    |||||||||||||||  ||| ||||| |||||||| || ||||||||||||||||||||||||||||||  ||||||||   ||  ||||| |||| ||     
T  29564674 atttatttttatttttcaaccaaaaacgtgcaaaattt-aaattttgttcctagtaagcgtatactcacatgtcaaattaaatcatgttccttaattttg 29564772  T
Q  433 taagcatggttagaacataataagaatcttcacaatga 470  Q
    || ||||||||||||||||||||||| |||||||||||    
T  29564773 taggcatggttagaacataataagaaccttcacaatga 29564810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 370 - 492
Target Start/End: Original strand, 19565056 - 19565179
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||| ||||| || || ||||| ||||||||| ||||||| ||||||||||    
T  19565056 aaaattgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttctctaattttgtaggcatgattagaacatgataagaaccttcacaatg 19565155  T
Q  470 -agttttgcagtttttaaacgaga 492  Q
     | ||||| |||||||||| ||||    
T  19565156 aaattttgtagtttttaaatgaga 19565179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 5135959 - 5135776
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | |  || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  5135959 aaagtttcatagcatttcgaagtcatttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 5135861  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||| | |  || |||||  || ||||| ||||||| |||||||||| | ||||| |||||||||| ||||    
T  5135860 gtcaaatttagttccctattttcgtaggcatgactataacatgataagaaccttcacaatgaaattttgtagtttttaaatgaga 5135776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 11017765 - 11017948
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||| ||      
T  11017765 aaagtttcatagcatttcgaagtcgtttaaatttattatgattttttaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatacttacaa 11017863  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| || | ||||| ||| |||||||||||    
T  11017864 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgaga 11017948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 45183651 - 45183469
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  45183651 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 45183553  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  || ||||| ||||||| ||||||| || | ||||| ||| |||||||||||    
T  45183552 gtcaaatttagttccctaat-ttgtaggcatgactaaaacatgataagaaccttcacagtgaaattttgtagtctttaaacgaga 45183469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 370 - 492
Target Start/End: Complemental strand, 45336485 - 45336362
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||| ||| || || ||||| ||||||||| ||||||| ||| ||||||    
T  45336485 aaaattgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttcccaaattttgtaggcatgattagaacatgataagaacctttacaatg 45336386  T
Q  470 -agttttgcagtttttaaacgaga 492  Q
     | ||||| |||||||||| ||||    
T  45336385 aaattttgtagtttttaaatgaga 45336362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 303 - 456
Target Start/End: Complemental strand, 39772470 - 39772318
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  39772470 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 39772372  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataag 456  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| |||||    
T  39772371 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataag 39772318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 34083615 - 34083797
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  |||||||| ||||||       
T  34083615 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtgtactcagaa 34083713  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    | ||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||| | ||||| | |||||||||||||    
T  34083714 g-caaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgaga 34083797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 466
Target Start/End: Original strand, 6503065 - 6503221
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| ||| |||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  6503065 aaagtttcatatcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 6503163  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcaca 466  Q
    ||||||||| |||||||||| || || |||||  ||||  || ||||||| |||||||    
T  6503164 gtcaaatttagttccctaattttgtaggcatgactagagtatgataagaaccttcaca 6503221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 470
Target Start/End: Complemental strand, 19390760 - 19390659
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataag-aatcttcacaat 468  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| ||| |||||| || || |||||  |||||||| ||||| || |||||||||    
T  19390760 aaaattgaaattttgttccgcgtaagcgtatactcaccagtcaaatttagtttcctaattttgtaggcatgactagaacatgataagaaaccttcacaat 19390661  T
Q  469 ga 470  Q
    ||    
T  19390660 ga 19390659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 466
Target Start/End: Complemental strand, 33041561 - 33041467
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcaca 466  Q
    |||||||||||||||||||  |||||||||||  ||| |||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||    
T  33041561 aaaattgaaattttgttccgcgtaagcgtata--cacaggtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcaca 33041467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 296
Target Start/End: Original strand, 52091714 - 52091773
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 296  Q
    |||||||||||||| |||||| ||||||||||| |||||| |||| ||||||||||||||    
T  52091714 ataaaggacgaaaaagttaccaaaaaataagttgtgggactatttgtgtaattttgccta 52091773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 237 - 295
Target Start/End: Complemental strand, 52090939 - 52090881
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 295  Q
    ||||||||| |||||||||||||||||||||||| ||||| |||| | |||||||||||    
T  52090939 ataaaggactaaaacgttacctaaaaataagttaagggactatttatataattttgcct 52090881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 392
Target Start/End: Original strand, 3159292 - 3159388
Alignment:
Q  295 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagt 392  Q
    ||||||| || | |||| ||| |||||||||  | |||| |||||||||||||||||||  ||| |||| |||| |||||||||||||||||||||||    
T  3159292 taaaaacgatctacaaattttcatagcattttgaagacgtttcaatttatttttatttttcaaccaaaatgtgc-aaaattgaaattttgttcctagt 3159388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 298
Target Start/End: Complemental strand, 3612656 - 3612591
Alignment:
Q  233 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaa 298  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||| | || ||||||||| ||||||    
T  3612656 aaaaataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttacctaaa 3612591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 390 - 465
Target Start/End: Complemental strand, 7468899 - 7468824
Alignment:
Q  390 agtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcac 465  Q
    ||||||| ||||||||| | ||||||||||| | ||||| ||||| |||| ||||||||||||||| || ||||||    
T  7468899 agtaagcttatactcacggttcaaatttcgtcctctaattttataggcatagttagaacataataaaaaccttcac 7468824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 300
Target Start/End: Complemental strand, 5048446 - 5048383
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 300  Q
    ||||||||  ||||||||| |||||| ||||||| | ||| |||| ||||||||||||||||||    
T  5048446 ataaaggattaaaacgttatctaaaattaagttaagagactatttatgtaattttgcctaaaaa 5048383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 353
Target Start/End: Original strand, 16094646 - 16094693
Alignment:
Q  306 tgcaaagttttatagcatttcaatgacgattcaatttatttttatttt 353  Q
    ||||||||||| ||||||||||| || | |||||||||||||||||||    
T  16094646 tgcaaagttttgtagcatttcaaagaagtttcaatttatttttatttt 16094693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 299
Target Start/End: Original strand, 44506331 - 44506394
Alignment:
Q  236 aataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 299  Q
    ||||||||||||||| ||||||||||| ||||||| ||||  | || |||||||||||| ||||    
T  44506331 aataaaggacgaaaatgttacctaaaattaagttaagggattaattgtgtaattttgcccaaaa 44506394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 233 - 295
Target Start/End: Complemental strand, 17574434 - 17574372
Alignment:
Q  233 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 295  Q
    |||||||||||||||||  ||||||||||| |||||||  |||| | || |||||||||||||    
T  17574434 aaaaataaaggacgaaagtgttacctaaaattaagttaatggacgaattgtgtaattttgcct 17574372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 233 - 299
Target Start/End: Original strand, 22975629 - 22975695
Alignment:
Q  233 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 299  Q
    |||||||||||||||||  |||||||||||  |||||| ||||| | || |||||||||| ||||||    
T  22975629 aaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgtctaaaa 22975695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 491
Target Start/End: Complemental strand, 27912615 - 27912493
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    ||||||| ||||||| ||  ||||||| ||||||||  |||||||||| |||||||||  ||  | |||||||| |||||| |||||||  | ||| |||    
T  27912615 aaaattgtaattttgatctgagtaagcatatactcataggtcaaattttgttccctaaatttgcaggcatggttggaacatgataagaacatgcaccatg 27912516  T
Q  470 ag-ttttgcagtttttaaacgag 491  Q
    |  ||||| ||||||||||||||    
T  27912515 aaattttggagtttttaaacgag 27912493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 297
Target Start/End: Complemental strand, 8851861 - 8851801
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 297  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||    
T  8851861 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaa 8851801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 28830041 - 28830105
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaac 301  Q
    |||||||||||||  |||| ||||||  |||||| ||||| | || |||||||||||||||||||    
T  28830041 ataaaggacgaaagtgttagctaaaataaagttaagggactaattgtgtaattttgcctaaaaac 28830105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 28876810 - 28876993
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||||| | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  |||||| |||||||||      
T  28876810 aaagtttcatagcatttcaaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcttatactcacaa 28876908  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||| | ||||| ||| |||||||||||    
T  28876909 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtctttaaacgaga 28876993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 3292392 - 3292575
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | ||||| |||||||| | |||||  ||| |||| ||| |||| |||||||||||||||  ||||||||||||||||      
T  3292392 aaagtttcatagcatttcgaagtcgattaaatttattatgatttttcaaccaaaacgtggaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 3292490  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || ||||| ||||||||| ||||||| ||||||| || | ||||| ||| |||||||||||    
T  3292491 gtcaaatttagttccctaattttgtaggcatgattagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgaga 3292575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 338 - 492
Target Start/End: Original strand, 29995507 - 29995661
Alignment:
Q  338 aatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagc 437  Q
    |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| || || ||    
T  29995507 aatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttccctaattttgtaggc 29995605  T
Q  438 atggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    |||  |||||||| ||||||| |||||||||| | ||||| |||||||||||||||    
T  29995606 atgactagaacatgataagaaccttcacaatgaaattttgtagtttttaaacgaga 29995661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 6236181 - 6235998
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | |  | || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  6236181 aaagtttcatagcatttcgaagtggtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 6236083  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||| | ||||| | |||||||||||||    
T  6236082 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgaga 6235998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 6689731 - 6689914
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | ||||| |||||||| | |||||  ||| |||| ||| |||| |||||||||||||||  ||||||||||||||||      
T  6689731 aaagtttcatagcatttcgaagtcgattaaatttattatgatttttcaaccaaaacgtggaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 6689829  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    |||||||||  ||||||||| || || ||||| ||||||||| ||||||| ||||||| || | ||||| ||| |||||||||||    
T  6689830 gtcaaatttaattccctaattttgtaggcatgattagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgaga 6689914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 370 - 492
Target Start/End: Original strand, 10352439 - 10352562
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| || || ||||| ||||||||| ||||||| ||||||||||    
T  10352439 aaaattgaaattttgttccgtgtaagtgtatactcacaagtcaaatttagttccctaattttgtaggcatgattagaacatgataagaaccttcacaatg 10352538  T
Q  470 -agttttgcagtttttaaacgaga 492  Q
     | ||||| | |||||||||||||    
T  10352539 aaattttgtactttttaaacgaga 10352562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 42333270 - 42333453
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  42333270 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 42333368  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| || | ||||| ||| |||||||||||    
T  42333369 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgaga 42333453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 470
Target Start/End: Original strand, 33135940 - 33136100
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| ||| |||||||| | || || || ||||||| |||||  ||| |||| |||||||| |||||||||||||||  |||| ||||||||||       
T  33135940 aaagtttcatatcatttcaaagtcgtttaaaattattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaaacgtatactcataa 33136038  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 470  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||    
T  33136039 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatga 33136100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 303 - 470
Target Start/End: Complemental strand, 13012868 - 13012701
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  13012868 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 13012770  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatga 470  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||    
T  13012769 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatga 13012701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 303 - 470
Target Start/End: Complemental strand, 20129993 - 20129826
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  20129993 atttgtaaagtttcatagcatttcgaaatcgttttaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 20129895  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatga 470  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||    
T  20129894 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatga 20129826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 303 - 470
Target Start/End: Original strand, 26438766 - 26438933
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  26438766 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 26438864  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatga 470  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||    
T  26438865 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatga 26438933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 303 - 470
Target Start/End: Original strand, 34406771 - 34406938
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  34406771 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 34406869  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatga 470  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||    
T  34406870 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatga 34406938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 35546623 - 35546441
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  35546623 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 35546525  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  || ||||| ||||||| ||||||| || | ||||| ||| |||||||||||    
T  35546524 gtcaaatttagttccctaat-ttgtaggcatgactaaaacatgataagaaccttcacagtgaaattttgtagtctttaaacgaga 35546441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 43143080 - 43143263
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || |  |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  43143080 aaagtttcatagcatttcgaagtcgttaaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 43143178  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| || | ||||| ||| |||||||||||    
T  43143179 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgaga 43143263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 303 - 470
Target Start/End: Complemental strand, 43356584 - 43356417
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  43356584 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 43356486  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatga 470  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||    
T  43356485 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatga 43356417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 303 - 470
Target Start/End: Complemental strand, 47501453 - 47501286
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  47501453 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 47501355  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatga 470  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||    
T  47501354 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatga 47501286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 428
Target Start/End: Original strand, 17510723 - 17510841
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || ||||||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  17510723 aaagtttcatagcatttcgaagtcgtttcaatttattttgatttttgaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 17510821  T
Q  409 gtcaaatttcgttccctaat 428  Q
    ||||||||| ||||||||||    
T  17510822 gtcaaatttagttccctaat 17510841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 470
Target Start/End: Original strand, 29134152 - 29134286
Alignment:
Q  335 ttcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttata 434  Q
    |||||||||||||||||||  ||| |||| ||   ||||||||||||||||||||||||   |||||||||  |||||||||| |||| ||||| || ||    
T  29134152 ttcaatttatttttatttttcaaccaaaacgt-ttaaaattgaaattttgttcctagtatttgtatactcataggtcaaattttgttctctaattttgta 29134250  T
Q  435 agcatggttagaacataataagaatcttcacaatga 470  Q
     ||| | |||||||||||||||||  ||||||||||    
T  29134251 ggcaagattagaacataataagaaatttcacaatga 29134286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 370 - 492
Target Start/End: Original strand, 30077191 - 30077314
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    |||||||||||||||||||  ||||| ||||| ||||  ||||||||| |||||| ||| || || ||||| ||| ||||| ||||||| ||||||||||    
T  30077191 aaaattgaaattttgttccgcgtaagtgtatattcacaagtcaaatttagttcccaaattttgtaggcatgattataacatgataagaaccttcacaatg 30077290  T
Q  470 -agttttgcagtttttaaacgaga 492  Q
     | ||||| |||||||||||||||    
T  30077291 aaattttgtagtttttaaacgaga 30077314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 370 - 464
Target Start/End: Original strand, 30216301 - 30216395
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttca 464  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||    
T  30216301 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttca 30216395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 309 - 466
Target Start/End: Complemental strand, 25931381 - 25931225
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  |||||||||| |||||      
T  25931381 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtattctcacaa 25931283  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcaca 466  Q
    ||||||||| |||||||||| || || |||||  || ||||| ||||||| |||||||    
T  25931282 gtcaaatttagttccctaattttgtaggcatgactaaaacatgataagaaccttcaca 25931225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 48990000 - 48989817
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||  | | || || |||||||||| |||||  ||| |||| |||| ||| |||||||||||||||  |||||||||||| |||      
T  48990000 aaagtttcatagcattttgaagtcgtttaaatttattttgatttttcaaccaaaacgtgccaaa-ttgaaattttgttccgcgtaagcgtatacccacaa 48989902  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    |||||||||  ||||||||| || || |||||  |||||||| ||||||| ||||||| || | ||||  |||||||||||||||    
T  48989901 gtcaaatttaattccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttttagtttttaaacgaga 48989817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 371 - 458
Target Start/End: Original strand, 26546856 - 26546943
Alignment:
Q  371 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaa 458  Q
    |||||| ||||||||||  ||||||||||||||||| ||||||||| ||||| ||||| || || |||| |||||||||| |||||||    
T  26546856 aaattgcaattttgttctgagtaagcgtatactcacgggtcaaattccgttctctaattttgtaggcattgttagaacatcataagaa 26546943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 492
Target Start/End: Original strand, 36381836 - 36382024
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||| ||||  ||||||||||||    
T  36381836 atttgtaaagtttcatagcatttcgaattcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttattccgcgtaagcgtatac 36381934  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaat-gagttttgcagtttttaaacgaga 492  Q
    ||||  | ||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||  | ||||| | |||||||||||||    
T  36381935 tcacaag-caaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaataaaattttgtaatttttaaacgaga 36382024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 428
Target Start/End: Original strand, 13390943 - 13391061
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || ||||| |||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||| ||      
T  13390943 aaagtttcatagcatttcgaagtcgtttaaatttcttttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactaacaa 13391041  T
Q  409 gtcaaatttcgttccctaat 428  Q
    ||||||||| ||||||||||    
T  13391042 gtcaaatttagttccctaat 13391061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 300
Target Start/End: Complemental strand, 21360514 - 21360451
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 300  Q
    ||||||||| |||||||||||||||| ||||||| ||||| |||| |||||||||||| |||||    
T  21360514 ataaaggactaaaacgttacctaaaattaagttaagggactatttatgtaattttgccaaaaaa 21360451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 30055488 - 30055555
Alignment:
Q  233 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 300  Q
    ||||| |||||||||||| ||||||||||| ||||||| ||||| | || ||||||||||||||||||    
T  30055488 aaaaaaaaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcctaaaaa 30055555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 468
Target Start/End: Complemental strand, 48130617 - 48130491
Alignment:
Q  341 ttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatg 440  Q
    ||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||  |||||| || |||||||||| || || |||      
T  48130617 ttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaagtcaaaattagttccctaattttgtaggcaat 48130519  T
Q  441 gttagaacataataagaatcttcacaat 468  Q
      |||||||| ||||||| |||||||||    
T  48130518 actagaacatgataagaaccttcacaat 48130491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 465
Target Start/End: Complemental strand, 56225950 - 56225820
Alignment:
Q  335 ttcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaatttt-gttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttat 433  Q
    |||||||||||||||||||  ||| |||| |||||||| ||| |||||| ||| |  |||| | ||||||||  |||||||||||||||| |||| || |    
T  56225950 ttcaatttatttttatttttcaaccaaaacgtgcaaaa-ttgcaattttcgtttcgggtaaacatatactcatgggtcaaatttcgttccataattttgt 56225852  T
Q  434 aagcatggttagaacataataagaatcttcac 465  Q
    | ||||||||||||||| | ||||| ||||||    
T  56225851 aggcatggttagaacatcacaagaaccttcac 56225820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 30110634 - 30110451
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | |  || |||||||||| |||||  ||| |||| |||||||| |||||||||| |||   ||||||| |||||||| |    
T  30110634 aaagtttcatagcatttcgaagtcatttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttattctgcgtaagcgcatactcacag 30110536  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| ||||| |||| || || |||||   | ||||| |||| ||  ||||||||| | ||||| |||||||||||||||    
T  30110535 gtcaaatttagttccttaattttgtaggcatgacaataacatgataataacattcacaatgaaattttgtagtttttaaacgaga 30110451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 458
Target Start/End: Original strand, 13502113 - 13502261
Alignment:
Q  308 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 407  Q
    |||||||| |||||||||||| || | || |||||| |||  |||| || ||||| | ||||||| ||| ||||||||||| ||||||| ||||| ||      
T  13502113 caaagtttcatagcatttcaaagatgttttaatttactttatttttcaatcaaaacg-tgcaaaa-ttgcaattttgttccaagtaagcatatacacatg 13502210  T
Q  408 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaa 458  Q
    | ||||||||| ||||||||| || || ||||| | ||||||| |||||||    
T  13502211 gatcaaatttccttccctaattttgtaggcatgctcagaacatcataagaa 13502261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 423
Target Start/End: Complemental strand, 44157295 - 44157182
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||| ||||  ||||||| |||||||||| ||||  ||||||||||||||||      
T  44157295 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacatgcaaaa-ttgaaattttattccgcgtaagcgtatactcacaa 44157197  T
Q  409 gtcaaatttcgttcc 423  Q
    ||||||||| |||||    
T  44157196 gtcaaatttagttcc 44157182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 314 - 419
Target Start/End: Original strand, 49062453 - 49062557
Alignment:
Q  314 tttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaa 413  Q
    ||||||||||||| | ||||  |||||||||||| |||||  ||| |||| |||| ||||||| ||||| ||||| ||| | ||||||||||| ||||||    
T  49062453 tttatagcatttcgaagacgcctcaatttattttgatttttcaactaaaatgtgc-aaaattgcaatttcgttccaagtgatcgtatactcacaggtcaa 49062551  T
Q  414 atttcg 419  Q
     |||||    
T  49062552 ttttcg 49062557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 30799612 - 30799668
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgc 293  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | || |||||||||||    
T  30799612 ataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgc 30799668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 406
Target Start/End: Complemental strand, 26449393 - 26449291
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| | | || || ||||||||||  ||||  ||  |||| |||||||| |||||||||||||||  ||||||||||||    
T  26449393 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgttttttcaatcaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 26449295  T
Q  403 tcac 406  Q
    ||||    
T  26449294 tcac 26449291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 465
Target Start/End: Complemental strand, 31853885 - 31853743
Alignment:
Q  322 atttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgtt 421  Q
    ||||||| |||| ||| ||||||||| |||||  ||| ||||  ||| ||| ||| |||||||| |  |||||| |||||||||| ||||||||| ||||    
T  31853885 atttcaaagacgtttctatttattttaatttttcaaccaaaacatgcgaaa-ttgcaattttgtactgagtaagtgtatactcacgggtcaaattacgtt 31853787  T
Q  422 ccctaatcttataagcatggttagaacataataagaatcttcac 465  Q
       |||| || || ||||||||||||| | ||||||| ||||||    
T  31853786 ttttaattttgtaggcatggttagaacgtcataagaaccttcac 31853743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 300
Target Start/End: Complemental strand, 37872824 - 37872761
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 300  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || |||||||||||| |||||    
T  37872824 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgccaaaaaa 37872761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 417
Target Start/End: Complemental strand, 40529698 - 40529651
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaattt 417  Q
    |||||||||||||||||||  ||||||||||||||||  |||||||||    
T  40529698 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaattt 40529651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 46143555 - 46143622
Alignment:
Q  233 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 300  Q
    |||||||||||||||||  |||||||||||  |||||| || || | || ||||||||||||||||||    
T  46143555 aaaaataaaggacgaaagtgttacctaaaataaagttaaggcactaattgtgtaattttgcctaaaaa 46143622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 50204643 - 50204702
Alignment:
Q  370 aaaattgaaatttt-gttcctagtaagcgtatactcactggtcaaatttcgttccctaat 428  Q
    |||||||||||||| |||||  ||||||||||||||||  ||||||||| ||||||||||    
T  50204643 aaaattgaaatttttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaat 50204702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 13294891 - 13294953
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 299  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  13294891 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 13294953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 295
Target Start/End: Complemental strand, 25297737 - 25297679
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 295  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || |||||||||||||    
T  25297737 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 25297679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 492
Target Start/End: Original strand, 4038262 - 4038383
Alignment:
Q  372 aattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-a 470  Q
    ||||| ||||||||||| ||||| | ||||||||| |||| |||||||||| ||||| || || | ||||||  ||| | |||||||  ||||| ||| |    
T  4038262 aattgcaattttgttccgagtaaacctatactcacaggtctaatttcgttctctaattttgtaggtatggttttaacttcataagaactttcaccatgaa 4038361  T
Q  471 gttttgcagtttttaaacgaga 492  Q
     ||||| || ||||||||||||    
T  4038362 attttggaggttttaaacgaga 4038383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 30055268 - 30055208
Alignment:
Q  234 aaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 294  Q
    |||||||||||| |||  ||||||||||| ||||||| ||||| | || ||||||||||||    
T  30055268 aaaataaaggacaaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 30055208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 297
Target Start/End: Complemental strand, 42856865 - 42856801
Alignment:
Q  233 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 297  Q
    |||||||||||||||||  |||||||||||  || ||| ||||| | || |||||||||||||||    
T  42856865 aaaaataaaggacgaaagtgttacctaaaataaaattaagggactaattgtgtaattttgcctaa 42856801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 9e-28; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 309 - 491
Target Start/End: Original strand, 15959441 - 15959623
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||||| |  | || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||   ||||||||||||||| |    
T  15959441 aaagtttcatagcatttcaaagttgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcataagcgtatactcacag 15959539  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgag 491  Q
    ||||||||| |||||| ||| || || |||||  |||||||| ||||||| |||||||||| | ||||| ||||||||||||||    
T  15959540 gtcaaatttagttcccaaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtttttaaacgag 15959623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 370 - 468
Target Start/End: Complemental strand, 23034586 - 23034488
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaat 468  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||| |||| |||| || || ||||| ||| |||||||||||||  ||||||||    
T  23034586 aaaattaaaattttgttcctagtaagcgtatactcacaggtcaaatttcattccttaattttgtaggcatgattataacataataagaactttcacaat 23034488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 309 - 470
Target Start/End: Original strand, 31501214 - 31501374
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | |  | || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  31501214 aaagtttcatagcatttcgaagttgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 31501312  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 470  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| | |||||||||    
T  31501313 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccatcacaatga 31501374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 13818650 - 13818467
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||   ||| |||||||| ||||| |||||||||  ||||||||||||||||      
T  13818650 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaattgaaacgtgcaaaa-ttgaagttttgttccgcgtaagcgtatactcacaa 13818552  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||| | ||||| | |||||||||||||    
T  13818551 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgaga 13818467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 31681038 - 31680855
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  31681038 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 31680940  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||| || || | ||||| ||| |||||||||||    
T  31680939 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcgcagtgaaattttgtagtctttaaacgaga 31680855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 33430992 - 33430809
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  33430992 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 33430894  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||| || || | ||||| ||| |||||||||||    
T  33430893 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcgcagtgaaattttgtagtctttaaacgaga 33430809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 371 - 492
Target Start/End: Complemental strand, 192517 - 192395
Alignment:
Q  371 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg- 469  Q
    |||||||||||||||||| ||||| ||||||||||  |||||||||| |||||||||| ||||| |||||   ||||||| ||||||| ||| ||||||     
T  192517 aaattgaaattttgttccgagtaaacgtatactcataggtcaaatttagttccctaattttataggcatgacgagaacatgataagaaccttaacaatga 192418  T
Q  470 agttttgcagtttttaaacgaga 492  Q
    | ||||| |||||||||| ||||    
T  192417 aattttgtagtttttaaatgaga 192395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 39657022 - 39657208
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcac-- 406  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||| ||||||||||      
T  39657022 aaagtttcatagcatttcgaagtcgtttaaatttattttgattttttaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaa 39657120  T
Q  407 -tggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
     || |||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||| | ||||| | |||||||||||||    
T  39657121 gtgatcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgaga 39657208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 303 - 470
Target Start/End: Original strand, 26282805 - 26282972
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  26282805 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 26282903  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatga 470  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||    
T  26282904 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatga 26282972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 303 - 470
Target Start/End: Original strand, 36293108 - 36293275
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  36293108 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 36293206  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataag-aatcttcacaatga 470  Q
    ||||  ||||||||| ||| |||||| || || |||||  |||||||| ||||| || |||||||||||    
T  36293207 tcacaagtcaaatttagtttcctaattttgtaggcatgactagaacatgataagaaaccttcacaatga 36293275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 337 - 428
Target Start/End: Original strand, 38268944 - 38269034
Alignment:
Q  337 caatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaat 428  Q
    ||||||||||| |||||  ||| |||| |||||||| ||||||||||||||| |||||||||||||| || |||||||||| ||||||||||    
T  38268944 caatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgagtaagcgtatacttacaggtcaaatttagttccctaat 38269034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 309 - 470
Target Start/End: Original strand, 16333395 - 16333555
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| ||||||| || | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  16333395 aaagtttcatagcatatcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 16333493  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 470  Q
    ||||||||| |||||||||| || ||||||||  || || || ||||||| |||| ||||||    
T  16333494 gtcaaatttagttccctaattttgtaagcatgactaaaatatgataagaaccttcccaatga 16333555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 370 - 463
Target Start/End: Complemental strand, 37255216 - 37255123
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttc 463  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||    
T  37255216 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttc 37255123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 1775871 - 1776053
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  1775871 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactcaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 1775969  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    | |||||||  ||| ||||| || || |||||  |||||||| ||||||| |||||||||| | ||||| | |||||||||||||    
T  1775970 g-caaatttaattctctaattttttaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgaga 1776053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 391 - 471
Target Start/End: Complemental strand, 28801791 - 28801711
Alignment:
Q  391 gtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgag 471  Q
    ||||||||||||||||  ||||||||| |||||||||| || ||||||||  |||||||| ||||||| ||||||||||||    
T  28801791 gtaagcgtatactcacaagtcaaatttagttccctaattttgtaagcatgactagaacatgataagaaccttcacaatgag 28801711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 493
Target Start/End: Complemental strand, 31272018 - 31271894
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaat- 468  Q
    |||||||||||||||||||||| ||| ||||||||||  |||||| || |||| ||||| |  ||  ||||| |||||||||||||||| ||||| |||     
T  31272018 aaaattgaaattttgttcctagcaagtgtatactcacaagtcaaaatttgttcactaatttggtagccatggctagaacataataagaaccttcagaata 31271919  T
Q  469 gagttttgcagtttttaaacgagag 493  Q
     |||||| ||||||| |||||||||    
T  31271918 aagtttttcagttttgaaacgagag 31271894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 370 - 492
Target Start/End: Complemental strand, 36291982 - 36291859
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaat- 468  Q
    |||||||||||||||||||  ||||| |||||||||   ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||     
T  36291982 aaaattgaaattttgttccgcgtaagtgtatactcataagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaata 36291883  T
Q  469 gagttttgcagtttttaaacgaga 492  Q
     | ||||  |||||||||||||||    
T  36291882 aaattttatagtttttaaacgaga 36291859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 370 - 492
Target Start/End: Complemental strand, 43069468 - 43069345
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| ||  |  ||||  |||||||| ||||||| ||||| ||||    
T  43069468 aaaattgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttccctaattttgcagacatgactagaacatgataagaaccttcaaaatg 43069369  T
Q  470 -agttttgcagtttttaaacgaga 492  Q
     | ||||| |||||||||||||||    
T  43069368 aaattttgtagtttttaaacgaga 43069345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 470
Target Start/End: Original strand, 17332115 - 17332275
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||  | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  |||||| ||||||| |      
T  17332115 aaagtttcatagcattttgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcatatactcgcaa 17332213  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 470  Q
    ||||||||| ||||| |||| || || |||||  |||||||| ||||||| |||||||||||    
T  17332214 gtcaaatttagttccttaattttgtaggcatgactagaacatgataagaaccttcacaatga 17332275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 390 - 470
Target Start/End: Complemental strand, 10034495 - 10034415
Alignment:
Q  390 agtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 470  Q
    |||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||    
T  10034495 agtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatga 10034415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 466
Target Start/End: Original strand, 12278412 - 12278508
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcaca 466  Q
    |||||| ||||||||||||  ||||||| ||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||    
T  12278412 aaaattaaaattttgttccgcgtaagcgaatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcaca 12278508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 295 - 468
Target Start/End: Complemental strand, 16155683 - 16155510
Alignment:
Q  295 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgtt-cctagta 393  Q
    ||||||| || || ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| ||||| |||| || ||  ||     
T  16155683 taaaaacgatctgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaatttttttttccgtgtg 16155585  T
Q  394 agcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaat 468  Q
    |||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||    
T  16155584 agcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaat 16155510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 492
Target Start/End: Complemental strand, 24793096 - 24792905
Alignment:
Q  306 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 405  Q
    ||||||||||| ||| |||| || |||  |||| ||||||||||||||  || ||||| |||| ||| ||| ||||||||||| ||||| |||||| ||     
T  24793096 tgcaaagttttgtaggattttaaagacatttcattttatttttatttttcaagaaaaatgtgcgaaa-ttggaattttgttccgagtaaacgtatattcg 24792998  T
Q  406 ctggtcaaatttcgttccctaatcttat-----aagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
      ||||||||| || || || || ||||     | ||||||||||||||| ||||||| |||||| ||| | ||||| |||||||||||||||    
T  24792997 tgggtcaaattccgctctcttattttattttataggcatggttagaacattataagaaccttcaccatgaaattttggagtttttaaacgaga 24792905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 30297492 - 30297606
Alignment:
Q  335 ttcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttata 434  Q
    |||||||||||||| ||||  ||| |||| |||||||| ||||||||||||| ||| ||||||   ||||||  |||||||||  ||||||||| || ||    
T  30297492 ttcaatttatttttgttttccaactaaaacgtgcaaaa-ttgaaattttgtttctattaagcg---actcacatgtcaaattttattccctaattttgta 30297587  T
Q  435 agcatggttagaacataat 453  Q
     ||||||| ||||||||||    
T  30297588 ggcatggtcagaacataat 30297606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 305
Target Start/End: Original strand, 35362206 - 35362274
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaacaatt 305  Q
    ||||||||||||| |||||||||||| ||||||| ||||| | || ||||||||||||| |||| ||||    
T  35362206 ataaaggacgaaagcgttacctaaaattaagttaagggactaattgtgtaattttgccttaaaagaatt 35362274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 470
Target Start/End: Complemental strand, 39435376 - 39435209
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  |||  ||||||| |||||||||||||||  |||||| |||||    
T  39435376 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacatgcaaaa-ttgaaattttgttccgcgtaagcttatac 39435278  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataag-aatcttcacaatga 470  Q
     |||  ||||||||| |||||||||| || || | |||  |||||||| ||||| || |||||||||||    
T  39435277 ccacaagtcaaatttagttccctaattttgtaggtatgactagaacatgataagaaaccttcacaatga 39435209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 27843080 - 27843023
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 294  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | || ||||||||||||    
T  27843080 ataaaggacgaaaatgttacctaaaattaagttaagggactaattatgtaattttgcc 27843023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 465
Target Start/End: Complemental strand, 8788452 - 8788334
Alignment:
Q  346 tttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttag 445  Q
    |||||||| |||| |||| |||||||| | | ||||||||| | ||||||||||| ||||   |||||||| | ||| | ||| || || ||||||||||    
T  8788452 tttatttttaaaccaaaatgtgcaaaa-tggcaattttgtttcgagtaagcgtattctcataagtcaaattccattctccaattttgtaggcatggttag 8788354  T
Q  446 aacataataagaatcttcac 465  Q
    ||||| ||||||| ||||||    
T  8788353 aacatcataagaaacttcac 8788334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 296
Target Start/End: Original strand, 15179078 - 15179137
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 296  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||||    
T  15179078 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccta 15179137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 296
Target Start/End: Original strand, 32994443 - 32994502
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 296  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||||    
T  32994443 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccta 32994502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 491
Target Start/End: Complemental strand, 27750846 - 27750724
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    ||||||| |||||| |||| ||||||| ||||||||  ||||||||||  |||||||||  | ||  |||||||||||||| |||| ||  ||||| | |    
T  27750846 aaaattgcaattttcttccgagtaagcatatactcatgggtcaaatttaattccctaattgtgtagccatggttagaacatcataaaaacattcaccaag 27750747  T
Q  470 ag-ttttgcagtttttaaacgag 491  Q
    |  ||||| ||||||||||||||    
T  27750746 aaattttgtagtttttaaacgag 27750724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 32458075 - 32458133
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 295  Q
    |||||||| ||||| ||||||||||| ||||||| ||||| | || |||||||||||||    
T  32458075 ataaaggatgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcct 32458133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 35363278 - 35363340
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 299  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  35363278 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 35363340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 19558161 - 19558218
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 294  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||    
T  19558161 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 19558218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 303 - 470
Target Start/End: Complemental strand, 18238 - 18071
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  18238 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 18140  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataag-aatcttcacaatga 470  Q
    ||||  ||||||||| |||||||||| || ||||||||  |||||||| ||||| || |||||||||||    
T  18139 tcacaagtcaaatttagttccctaattttgtaagcatgactagaacatgataagaaaccttcacaatga 18071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 493
Target Start/End: Complemental strand, 45121851 - 45121696
Alignment:
Q  338 aatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagc 437  Q
    |||||||||| |||||  ||| |||| ||| |||||||||||||||||||| |||||||||||||||||  ||||||||| |||||||||| || || |     
T  45121851 aatttattttgatttttcaaccaaaacgtg-aaaaattgaaattttgttccaagtaagcgtatactcacatgtcaaatttagttccctaattttgtacgt 45121753  T
Q  438 atggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgagag 493  Q
    |||  || ||||| ||||||| |||||||||| | ||||| ||||||||||| ||||    
T  45121752 atgactaaaacatgataagaaacttcacaatgaaattttgtagtttttaaacaagag 45121696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 45419254 - 45419071
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  45419254 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 45419156  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| || | ||||| ||| |||||||||||    
T  45419155 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgaga 45419071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 492
Target Start/End: Original strand, 7072016 - 7072213
Alignment:
Q  295 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaa 394  Q
    |||||| ||| || ||||||| |||||||||| |   ||||| |||||||||| |||||  ||| |||| |||||||| ||||||||||||||   ||||    
T  7072016 taaaaataatatgtaaagtttcatagcatttcgaaatcgattaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttcagcgtaa 7072114  T
Q  395 gcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    |||||||| |||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||| ||||| | ||||| |||| ||||||||||    
T  7072115 gcgtatacccacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcccaatgaaattttgtagttattaaacgaga 7072213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 4554689 - 4554871
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| ||| |||||| ||| || || |||||||||||||||| || ||||||| ||||||| |||||||||||||||  | ||||||||||| ||      
T  4554689 aaagtttcataacatttcgatgtcgtttaaatttatttttattttcaaccaaaaag-tgcaaaa-ttgaaattttgttccacgcaagcgtatactaacaa 4554786  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    |||||||||  ||| ||||| || || |||||  |||||||| |||||||  ||||||||| | ||||| |||||||||||||||    
T  4554787 gtcaaatttaattctctaattttgtaggcatgactagaacatgataagaacattcacaatgaaattttgtagtttttaaacgaga 4554871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 303 - 470
Target Start/End: Original strand, 17444528 - 17444695
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  17444528 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 17444626  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataag-aatcttcacaatga 470  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||| || |||||||||||    
T  17444627 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaaccttcacaatga 17444695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 35963363 - 35963180
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| ||||||| || | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  35963363 aaagtttcatagcatatcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 35963265  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||||||| | ||||| |||||||||| | ||||| | |||||||||||||    
T  35963264 gtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatgaaattttgtaatttttaaacgaga 35963180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 303 - 470
Target Start/End: Original strand, 41251121 - 41251288
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  41251121 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 41251219  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatga 470  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||    
T  41251220 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatga 41251288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 458
Target Start/End: Complemental strand, 18829518 - 18829380
Alignment:
Q  319 agcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttc 418  Q
    |||||||||| |||| ||| ||||||||| |||||  ||| |||| |||| ||| ||| ||||||||||| |||||| |||||||||| ||||||||| |    
T  18829518 agcatttcaaagacgtttcgatttattttaatttttcaacgaaaacgtgcgaaa-ttgcaattttgttccgagtaagtgtatactcacgggtcaaattcc 18829420  T
Q  419 gttccctaatcttataagcatggttagaacataataagaa 458  Q
    |||| ||||| || || |||| |||||||||| |||||||    
T  18829419 gttctctaattttgtaggcatagttagaacatcataagaa 18829380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 370 - 492
Target Start/End: Complemental strand, 18982202 - 18982079
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||| |||    
T  18982202 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacgatg 18982103  T
Q  470 -agttttgcagtttttaaacgaga 492  Q
     | ||||| | |||||||||||||    
T  18982102 aaattttgtaatttttaaacgaga 18982079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 370 - 492
Target Start/End: Original strand, 31581175 - 31581298
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    ||||||||||||||||| |  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  31581175 aaaattgaaattttgtttcgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 31581274  T
Q  470 -agttttgcagtttttaaacgaga 492  Q
     | ||||| | |||||||||||||    
T  31581275 aaattttgtaatttttaaacgaga 31581298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 303 - 470
Target Start/End: Original strand, 6403291 - 6403458
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  6403291 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 6403389  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatga 470  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||    
T  6403390 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatga 6403458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 26162198 - 26162381
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| ||| |||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||| ||||      
T  26162198 aaagtttcatatcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatagtcacaa 26162296  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || | |||  |||||||| ||||| | ||||| |||| | ||||| |||||||||||||||    
T  26162297 gtcaaatttagttccctaattttgtaggtatgactagaacatgataaggaccttcagaatgaaattttgtagtttttaaacgaga 26162381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 309 - 492
Target Start/End: Original strand, 32126683 - 32126866
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| ||| ||||||||||||||||||||  ||||||||||||||||      
T  32126683 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtg-aaaaattgaaattttgttccgcgtaagcgtatactcacaa 32126781  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||||||| |||| || ||||| | || | ||||| | |||||||||||||    
T  32126782 gtcaaatttagttccctaattttgtaggcatgactagaacatgataataaccttcaaagtgaaattttgtaatttttaaacgaga 32126866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 370 - 492
Target Start/End: Original strand, 2957700 - 2957823
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| || |||||||    
T  2957700 aaaattgaaattttgttccgcgtaagggtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaacctacacaatg 2957799  T
Q  470 -agttttgcagtttttaaacgaga 492  Q
     | ||||| | |||||||||||||    
T  2957800 aaattttgtaatttttaaacgaga 2957823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 370 - 492
Target Start/End: Original strand, 12756393 - 12756516
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    |||||||||||||||||||   |||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| ||    
T  12756393 aaaattgaaattttgttccgcataagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtg 12756492  T
Q  470 -agttttgcagtttttaaacgaga 492  Q
     | ||||| ||| |||||||||||    
T  12756493 aaattttgtagtctttaaacgaga 12756516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 371 - 492
Target Start/End: Original strand, 37621618 - 37621740
Alignment:
Q  371 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg- 469  Q
    |||||| ||||||||||| ||||||| |||||||||   ||||| |  |||| ||||| || || ||||||||||||||| ||||||| ||||||||||     
T  37621618 aaattgcaattttgttccgagtaagcatatactcacgaatcaaagtctgttctctaattttgtaggcatggttagaacatcataagaaccttcacaatga 37621717  T
Q  470 agttttgcagtttttaaacgaga 492  Q
    | ||||| |||||||||||||||    
T  37621718 aattttgaagtttttaaacgaga 37621740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 2286460 - 2286278
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||  | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  2286460 aaagtttcatagcattttgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgtgtaagcgtatactcacaa 2286362  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    | ||||||| ||| |||||| || || |||||  |||||||| ||||||| |||||||||| | ||||| | |||||||||||||    
T  2286361 g-caaatttagtttcctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgaga 2286278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 306 - 465
Target Start/End: Complemental strand, 26591716 - 26591559
Alignment:
Q  306 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 405  Q
    ||||||||||  ||||||||||| ||   |||||||||||||||||||  ||| |||| |||| ||| ||| ||||||| ||| ||||| ||||||||||    
T  26591716 tgcaaagtttcgtagcatttcaaagatatttcaatttatttttatttttcaaccaaaacgtgcgaaa-ttgcaattttgatccgagtaaacgtatactca 26591618  T
Q  406 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcac 465  Q
      ||||||||| | ||| ||||| || || ||||||||||| ||| ||||||| ||||||    
T  26591617 tgggtcaaattccattctctaattttttaggcatggttagaccat-ataagaaccttcac 26591559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 470
Target Start/End: Complemental strand, 42442597 - 42442497
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 469  Q
    ||||||||||||||||||   ||||||||||||||||  ||||||||| ||||| |||| || || |||||  |||||||| |||||||  |||||||||    
T  42442597 aaaattgaaattttgttctgcgtaagcgtatactcacaagtcaaatttagttccataattttgtaggcatgactagaacatgataagaacattcacaatg 42442498  T
Q  470 a 470  Q
    |    
T  42442497 a 42442497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 296
Target Start/End: Original strand, 8322471 - 8322530
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 296  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | |||||||||||||||||    
T  8322471 ataaaggacgaaaatgttacctaaaattaagttaagggacgaattctgtaattttgccta 8322530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 391 - 492
Target Start/End: Complemental strand, 26238531 - 26238429
Alignment:
Q  391 gtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacg 489  Q
    ||||||||||||||||  | ||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||| | ||||| |||||||||| |    
T  26238531 gtaagcgtatactcacaaggcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtttttaaatg 26238432  T
Q  490 aga 492  Q
    |||    
T  26238431 aga 26238429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 17373394 - 17373467
Alignment:
Q  371 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggtta 444  Q
    |||||| ||||||||||| | ||||||||||||||| ||||||||||| ||| ||||| || || |||||||||    
T  17373394 aaattgcaattttgttccaaataagcgtatactcacgggtcaaatttcattctctaattttgtaggcatggtta 17373467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 428
Target Start/End: Original strand, 8058871 - 8058957
Alignment:
Q  341 ttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaat 428  Q
    ||||||| |||||  ||| |||| |||||||| || ||||||||||||  ||||||||||||||||  ||||||||| ||||||||||    
T  8058871 ttattttgatttttcaaccaaaacgtgcaaaa-ttaaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaat 8058957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 237 - 300
Target Start/End: Original strand, 27360410 - 27360473
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 300  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || ||||||||||||||||||    
T  27360410 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaaa 27360473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 297
Target Start/End: Original strand, 30337717 - 30337777
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 297  Q
    ||||||||||| || |||| |||||| ||||||| ||||| | ||||||||||||||||||    
T  30337717 ataaaggacgataatgttatctaaaattaagttaagggactaattctgtaattttgcctaa 30337777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 492
Target Start/End: Original strand, 44084185 - 44084280
Alignment:
Q  398 tatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    |||||||||  ||||||||| |||||||||| || || |||||  ||||| || |||| || |||||||||| | ||||| |||||||||||||||    
T  44084185 tatactcacaagtcaaatttagttccctaattttgtaggcatgactagaaaatgataataaccttcacaatgaaattttgtagtttttaaacgaga 44084280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 295
Target Start/End: Complemental strand, 17846065 - 17846007
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 295  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || |||||||||||||    
T  17846065 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcct 17846007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 30337481 - 30337424
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 294  Q
    |||||||||||||| ||||||||||| |||||||  |||| | || ||||||||||||    
T  30337481 ataaaggacgaaaatgttacctaaaattaagttaatggactaattgtgtaattttgcc 30337424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 816613 - 816685
Alignment:
Q  370 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggt 442  Q
    ||||||| |||||| || | |||||||||||||| || |||||||||| ||| |||||| || || |||||||    
T  816613 aaaattgcaattttatttcgagtaagcgtatacttacgggtcaaattttgtttcctaattttgtaggcatggt 816685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 456
Target Start/End: Complemental strand, 25391568 - 25391505
Alignment:
Q  392 taagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataag 456  Q
    ||||| |||||||| |||||||||||| ||| ||||| || || ||||||||||||||| |||||    
T  25391568 taagcatatactca-tggtcaaatttcattcactaattttgtaggcatggttagaacatcataag 25391505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 487
Target Start/End: Complemental strand, 17978 - 17800
Alignment:
Q  308 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 407  Q
    |||||||| ||| |||||| | |||| | |||||| ||||||||||  ||| ||| | ||||||| |||||||||||||||||||||  ||||||| |      
T  17978 caaagtttcatatcatttcgaagacgttgcaatttgtttttatttttcaaccaaacg-tgcaaaa-ttgaaattttgttcctagtaattgtatactaata 17881  T
Q  408 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaa 487  Q
    | |||||| ||||||| |||| || || ||||||||||||||||||| ||| |||||||||| | |||||| |||||||||    
T  17880 gatcaaatgtcgttccttaattttgtaggcatggttagaacataatatgaaccttcacaatgaaattttgctgtttttaaa 17800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 53578 - 53395
Alignment:
Q  309 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 408  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||      
T  53578 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaa 53480  T
Q  409 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| || | ||||| ||| |||||||||||    
T  53479 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgaga 53395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 303 - 470
Target Start/End: Original strand, 479944 - 480111
Alignment:
Q  303 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 402  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  479944 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 480042  T
Q  403 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatga 470  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||    
T  480043 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatga 480111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 297
Target Start/End: Complemental strand, 330254 - 330194
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 297  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || |||||||||||||||    
T  330254 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcctaa 330194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 492
Target Start/End: Complemental strand, 35479 - 35288
Alignment:
Q  306 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 405  Q
    ||||||||||| ||| |||| || |||  |||| ||||||||||||||  || ||||| |||| ||| ||| ||||||||||| ||||| |||||| ||     
T  35479 tgcaaagttttgtaggattttaaagacatttcattttatttttatttttcaagaaaaatgtgcgaaa-ttggaattttgttccgagtaaacgtatattcg 35381  T
Q  406 ctggtcaaatttcgttccctaatcttat-----aagcatggttagaacataataagaatcttcacaatg-agttttgcagtttttaaacgaga 492  Q
      ||||||||| || || || || ||||     | ||||||||||||||| ||||||| |||||| ||| | ||||| |||||||||||||||    
T  35380 tgggtcaaattccgctctcttattttattttataggcatggttagaacattataagaaccttcaccatgaaattttggagtttttaaacgaga 35288  T

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Target: scaffold0831 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 336 - 447
Target Start/End: Complemental strand, 3521 - 3411
Alignment:
Q  336 tcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataa 435  Q
    ||||||| ||||||||||  |||||||| |||||||| ||| ||||||||||| | ||| | ||||||||| | |||||| | |||||| ||| || ||     
T  3521 tcaatttgtttttatttttcaacaaaaatgtgcaaaa-ttgcaattttgttccgactaaccatatactcacggatcaaatgttgttccccaattttgtag 3423  T
Q  436 gcatggttagaa 447  Q
    ||||||||||||    
T  3422 gcatggttagaa 3411  T

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Target: scaffold0495 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 470
Target Start/End: Complemental strand, 8695 - 8532
Alignment:
Q  306 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 405  Q
    |||||| ||| |||| ||||||| || | ||| |||| ||||||||||  ||| |||| |||  ||| ||| ||||||||||  ||||| | |||| |||    
T  8695 tgcaaaatttcatagtatttcaaagatgtttcgatttctttttatttttcaaccaaaacgtgtgaaa-ttgcaattttgttctgagtaaacatatattca 8597  T
Q  406 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 470  Q
    |  |||||||||||||  ||||| || || ||||||||||||||  ||||||| |||||| ||||    
T  8596 cgagtcaaatttcgttttctaattttctaggcatggttagaacaacataagaaccttcaccatga 8532  T

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Target: scaffold0311 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 297
Target Start/End: Original strand, 12885 - 12945
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 297  Q
    |||||||||||||| |||| |||||| ||||||| ||||| | || |||||||||||||||    
T  12885 ataaaggacgaaaatgttatctaaaattaagttaagggactaattgtgtaattttgcctaa 12945  T

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Target: scaffold0029 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 297
Target Start/End: Complemental strand, 136973 - 136913
Alignment:
Q  237 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 297  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || |||||||||||||||    
T  136973 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcctaa 136913  T

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Target: scaffold0347 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 294
Target Start/End: Complemental strand, 12001 - 11940
Alignment:
Q  233 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 294  Q
    ||||| |||| ||||||| ||||||||||| ||||||| ||||| | || ||||||||||||    
T  12001 aaaaaaaaagaacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcc 11940  T

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Target: scaffold0347; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 12223 - 12280
Alignment:
Q  238 taaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 295  Q
    ||||||||||||  ||||||||||| ||||||| ||||| | || |||||||||||||    
T  12223 taaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 12280  T

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