View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11383_low_2 (Length: 577)

Name: NF11383_low_2
Description: NF11383
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11383_low_2
NF11383_low_2
[»] chr1 (33 HSPs)
chr1 (295-481)||(49325940-49326127)
chr1 (61-150)||(424345-424434)
chr1 (61-150)||(7995614-7995703)
chr1 (61-148)||(32784088-32784175)
chr1 (61-146)||(3232770-3232855)
chr1 (65-150)||(33487088-33487173)
chr1 (61-150)||(12871599-12871688)
chr1 (61-146)||(14265266-14265351)
chr1 (61-150)||(28678184-28678273)
chr1 (61-150)||(42490871-42490960)
chr1 (61-146)||(20411555-20411640)
chr1 (61-150)||(27534677-27534766)
chr1 (65-146)||(29205267-29205348)
chr1 (61-133)||(37822399-37822471)
chr1 (479-548)||(49329608-49329678)
chr1 (61-134)||(4882413-4882486)
chr1 (61-115)||(44517160-44517214)
chr1 (61-150)||(18343592-18343681)
chr1 (87-150)||(33939082-33939145)
chr1 (61-150)||(45193680-45193769)
chr1 (61-146)||(4871080-4871165)
chr1 (61-146)||(13488590-13488675)
chr1 (62-135)||(17347592-17347664)
chr1 (61-150)||(42276335-42276423)
chr1 (61-150)||(45750456-45750545)
chr1 (231-288)||(49324400-49324457)
chr1 (66-111)||(9298474-9298519)
chr1 (1-33)||(15791270-15791302)
chr1 (61-102)||(51418040-51418080)
chr1 (1-33)||(14265378-14265410)
chr1 (1-33)||(29205379-29205411)
chr1 (61-101)||(29726650-29726690)
chr1 (1-33)||(44517241-44517273)
[»] chr3 (37 HSPs)
chr3 (61-150)||(49628149-49628239)
chr3 (61-150)||(3456921-3457010)
chr3 (61-150)||(4206573-4206662)
chr3 (61-150)||(36691861-36691950)
chr3 (61-150)||(11819061-11819150)
chr3 (61-150)||(30156344-30156432)
chr3 (61-146)||(31270308-31270393)
chr3 (61-150)||(31462808-31462897)
chr3 (61-150)||(13702034-13702123)
chr3 (61-150)||(14585440-14585529)
chr3 (61-150)||(34960920-34961009)
chr3 (61-150)||(48652502-48652591)
chr3 (61-150)||(53155492-53155581)
chr3 (61-148)||(54239080-54239167)
chr3 (68-150)||(1074962-1075044)
chr3 (61-135)||(35174697-35174771)
chr3 (61-146)||(32080816-32080901)
chr3 (61-150)||(48400877-48400966)
chr3 (61-150)||(27189456-27189545)
chr3 (61-150)||(36624756-36624845)
chr3 (67-144)||(53402614-53402691)
chr3 (61-150)||(39610182-39610279)
chr3 (61-132)||(22484961-22485032)
chr3 (61-134)||(40013334-40013410)
chr3 (61-146)||(19645203-19645288)
chr3 (61-150)||(55090645-55090734)
chr3 (61-134)||(24483740-24483813)
chr3 (61-150)||(38527241-38527330)
chr3 (64-148)||(40883933-40884018)
chr3 (61-99)||(41868356-41868394)
chr3 (61-113)||(4817892-4817944)
chr3 (95-145)||(48854889-48854939)
chr3 (1-33)||(11819177-11819209)
chr3 (1-33)||(14585556-14585588)
chr3 (1-33)||(31462749-31462781)
chr3 (1-33)||(35174798-35174830)
chr3 (1-33)||(53402715-53402747)
[»] chr8 (34 HSPs)
chr8 (61-150)||(37612631-37612720)
chr8 (61-148)||(41361712-41361799)
chr8 (61-146)||(10338884-10338969)
chr8 (61-150)||(31407810-31407899)
chr8 (62-150)||(2025272-2025360)
chr8 (61-131)||(2234532-2234602)
chr8 (61-150)||(24791230-24791319)
chr8 (61-150)||(10147924-10148014)
chr8 (61-150)||(30026942-30027031)
chr8 (61-150)||(39067751-39067840)
chr8 (62-150)||(1810283-1810370)
chr8 (61-113)||(37128548-37128600)
chr8 (61-131)||(23971156-23971226)
chr8 (61-145)||(9501572-9501657)
chr8 (61-150)||(14600760-14600849)
chr8 (61-135)||(1039955-1040029)
chr8 (61-134)||(12329620-12329693)
chr8 (61-146)||(31202440-31202525)
chr8 (62-150)||(11161860-11161948)
chr8 (61-109)||(31308167-31308215)
chr8 (66-144)||(30039399-30039476)
chr8 (61-150)||(13570788-13570877)
chr8 (61-134)||(3204818-3204890)
chr8 (66-115)||(7281658-7281707)
chr8 (86-150)||(7583851-7583915)
chr8 (61-146)||(24699812-24699899)
chr8 (83-150)||(13576260-13576326)
chr8 (1-33)||(2234473-2234505)
chr8 (1-33)||(3204759-3204791)
chr8 (1-33)||(7579858-7579890)
chr8 (64-120)||(15288863-15288919)
chr8 (64-120)||(15469232-15469288)
chr8 (1-33)||(24791171-24791203)
chr8 (1-33)||(30026883-30026915)
[»] chr4 (53 HSPs)
chr4 (61-148)||(31521962-31522049)
chr4 (61-150)||(43244435-43244524)
chr4 (62-149)||(394329-394416)
chr4 (61-150)||(7060302-7060391)
chr4 (61-150)||(22757072-22757161)
chr4 (61-148)||(51152105-51152192)
chr4 (61-148)||(8712510-8712597)
chr4 (61-135)||(13965553-13965627)
chr4 (61-150)||(24825627-24825716)
chr4 (61-150)||(29268831-29268920)
chr4 (61-150)||(44757096-44757185)
chr4 (61-135)||(38944201-38944275)
chr4 (61-150)||(478066-478154)
chr4 (61-150)||(24568767-24568856)
chr4 (61-150)||(6911658-6911747)
chr4 (61-150)||(11210367-11210456)
chr4 (61-150)||(24100117-24100206)
chr4 (61-146)||(26674354-26674439)
chr4 (61-146)||(26742517-26742602)
chr4 (61-135)||(7083870-7083944)
chr4 (61-150)||(24611853-24611942)
chr4 (61-150)||(25658145-25658234)
chr4 (67-148)||(27394810-27394891)
chr4 (61-150)||(30202016-30202105)
chr4 (61-114)||(43493341-43493394)
chr4 (61-133)||(7861259-7861331)
chr4 (66-146)||(22049464-22049543)
chr4 (65-135)||(20399961-20400031)
chr4 (61-150)||(39837572-39837662)
chr4 (61-148)||(19745369-19745456)
chr4 (61-148)||(19794350-19794437)
chr4 (61-150)||(29922812-29922904)
chr4 (61-131)||(50801214-50801284)
chr4 (61-126)||(6881958-6882023)
chr4 (61-145)||(5814330-5814414)
chr4 (61-135)||(45351124-45351200)
chr4 (61-135)||(45360603-45360679)
chr4 (61-115)||(2447813-2447867)
chr4 (62-104)||(39523433-39523475)
chr4 (61-150)||(7084184-7084273)
chr4 (62-135)||(20887810-20887883)
chr4 (66-134)||(12717177-12717244)
chr4 (64-148)||(42197533-42197616)
chr4 (83-133)||(28837072-28837120)
chr4 (68-150)||(626609-626690)
chr4 (61-139)||(36124401-36124479)
chr4 (1-33)||(7083811-7083843)
chr4 (1-33)||(11210308-11210340)
chr4 (1-33)||(20887751-20887783)
chr4 (1-33)||(30202132-30202164)
chr4 (1-33)||(38944143-38944175)
chr4 (1-33)||(43493282-43493314)
chr4 (1-33)||(50801311-50801343)
[»] chr7 (44 HSPs)
chr7 (61-147)||(17473777-17473863)
chr7 (61-147)||(17579351-17579437)
chr7 (61-150)||(21603441-21603529)
chr7 (61-150)||(36579366-36579455)
chr7 (61-148)||(9785297-9785384)
chr7 (61-150)||(11832996-11833086)
chr7 (61-146)||(28664966-28665051)
chr7 (61-150)||(42603823-42603912)
chr7 (61-150)||(45457610-45457699)
chr7 (61-148)||(5684345-5684432)
chr7 (61-148)||(5709395-5709482)
chr7 (61-150)||(21990639-21990729)
chr7 (61-150)||(17509258-17509346)
chr7 (61-150)||(17543868-17543956)
chr7 (61-150)||(46026083-46026172)
chr7 (65-150)||(48304453-48304538)
chr7 (61-134)||(32740746-32740820)
chr7 (61-146)||(1281191-1281276)
chr7 (61-150)||(27535434-27535523)
chr7 (61-146)||(39533029-39533114)
chr7 (61-150)||(45482042-45482131)
chr7 (61-148)||(22747562-22747648)
chr7 (61-150)||(6667373-6667463)
chr7 (61-146)||(10574363-10574448)
chr7 (61-150)||(42644654-42644743)
chr7 (61-115)||(43847083-43847137)
chr7 (65-134)||(2622586-2622655)
chr7 (61-150)||(3266360-3266455)
chr7 (61-108)||(10094461-10094508)
chr7 (61-107)||(15674666-15674712)
chr7 (61-150)||(41287935-41288025)
chr7 (91-150)||(40761567-40761626)
chr7 (61-135)||(24320277-24320351)
chr7 (1-33)||(26161074-26161106)
chr7 (94-146)||(36719628-36719680)
chr7 (66-146)||(39707272-39707351)
chr7 (96-150)||(17221643-17221696)
chr7 (65-134)||(4621425-4621494)
chr7 (1-33)||(1281132-1281164)
chr7 (61-101)||(14657877-14657917)
chr7 (1-33)||(24320218-24320250)
chr7 (1-33)||(36253024-36253056)
chr7 (1-33)||(36719547-36719579)
chr7 (1-33)||(45457551-45457583)
[»] scaffold0312 (1 HSPs)
scaffold0312 (61-150)||(6115-6204)
[»] chr6 (26 HSPs)
chr6 (61-150)||(14783225-14783314)
chr6 (61-150)||(21507862-21507951)
chr6 (61-150)||(15590133-15590222)
chr6 (61-150)||(6419912-6420001)
chr6 (61-150)||(8693711-8693803)
chr6 (61-150)||(12481424-12481513)
chr6 (61-146)||(31937473-31937557)
chr6 (61-150)||(23654228-23654317)
chr6 (75-144)||(29927447-29927516)
chr6 (86-150)||(4084996-4085060)
chr6 (517-557)||(4660653-4660693)
chr6 (61-150)||(2304864-2304953)
chr6 (67-144)||(15175797-15175873)
chr6 (67-144)||(15470295-15470371)
chr6 (61-149)||(19402862-19402950)
chr6 (61-149)||(35219958-35220045)
chr6 (61-148)||(4921935-4922023)
chr6 (61-120)||(4393778-4393837)
chr6 (61-150)||(6296303-6296395)
chr6 (61-150)||(6303113-6303205)
chr6 (1-30)||(23101374-23101403)
chr6 (1-33)||(15590074-15590106)
chr6 (1-33)||(19402803-19402835)
chr6 (1-33)||(23654344-23654376)
chr6 (1-33)||(31705259-31705291)
chr6 (61-105)||(31937585-31937629)
[»] chr2 (47 HSPs)
chr2 (61-150)||(5754266-5754355)
chr2 (63-150)||(43474184-43474271)
chr2 (61-150)||(11937912-11938002)
chr2 (61-150)||(12704665-12704754)
chr2 (61-150)||(17268178-17268267)
chr2 (61-146)||(27095687-27095772)
chr2 (61-146)||(44942267-44942352)
chr2 (61-135)||(34416815-34416889)
chr2 (61-150)||(9690027-9690116)
chr2 (61-150)||(15919852-15919941)
chr2 (61-150)||(20561186-20561275)
chr2 (61-150)||(22597113-22597202)
chr2 (61-150)||(18089446-18089535)
chr2 (61-150)||(25067830-25067919)
chr2 (61-146)||(33012059-33012144)
chr2 (65-149)||(13740718-13740801)
chr2 (62-150)||(38384497-38384585)
chr2 (61-150)||(9978723-9978812)
chr2 (61-134)||(31908870-31908943)
chr2 (61-150)||(36867986-36868075)
chr2 (61-150)||(38535359-38535448)
chr2 (62-150)||(34963121-34963208)
chr2 (61-133)||(35333500-35333572)
chr2 (63-150)||(7073004-7073091)
chr2 (61-115)||(28231151-28231205)
chr2 (61-146)||(4604361-4604446)
chr2 (86-150)||(32015198-32015262)
chr2 (61-135)||(10287060-10287133)
chr2 (61-149)||(4739310-4739396)
chr2 (61-135)||(34470957-34471033)
chr2 (61-150)||(13879060-13879157)
chr2 (61-150)||(14019185-14019282)
chr2 (86-146)||(28261972-28262032)
chr2 (61-108)||(4426712-4426759)
chr2 (61-108)||(32314462-32314509)
chr2 (61-97)||(4732102-4732138)
chr2 (1-33)||(7072943-7072975)
chr2 (66-134)||(17767611-17767678)
chr2 (91-146)||(17116490-17116544)
chr2 (66-144)||(11798576-11798653)
chr2 (1-33)||(4732164-4732196)
chr2 (1-33)||(9978664-9978696)
chr2 (106-150)||(12891188-12891232)
chr2 (1-33)||(20561127-20561159)
chr2 (1-33)||(25067946-25067978)
chr2 (1-33)||(29542886-29542918)
chr2 (1-33)||(34963071-34963103)
[»] chr5 (34 HSPs)
chr5 (62-144)||(17699537-17699619)
chr5 (61-150)||(17331306-17331395)
chr5 (61-150)||(6281022-6281111)
chr5 (61-146)||(27241046-27241131)
chr5 (61-150)||(28040607-28040696)
chr5 (61-150)||(33164522-33164611)
chr5 (61-150)||(43493850-43493939)
chr5 (61-150)||(32347768-32347858)
chr5 (61-145)||(42609127-42609211)
chr5 (61-148)||(29097769-29097856)
chr5 (67-150)||(26295118-26295201)
chr5 (65-131)||(12439692-12439757)
chr5 (61-150)||(17096293-17096385)
chr5 (89-150)||(7771888-7771949)
chr5 (61-145)||(178160-178244)
chr5 (61-150)||(6635227-6635317)
chr5 (61-135)||(34431053-34431127)
chr5 (61-115)||(39179882-39179936)
chr5 (61-146)||(39531457-39531540)
chr5 (61-146)||(981079-981164)
chr5 (61-150)||(3740336-3740424)
chr5 (61-149)||(20483165-20483253)
chr5 (61-116)||(3079359-3079414)
chr5 (61-150)||(23882170-23882259)
chr5 (61-108)||(17687225-17687272)
chr5 (61-135)||(42396566-42396640)
chr5 (61-98)||(12891706-12891743)
chr5 (1-33)||(6635344-6635376)
chr5 (1-33)||(7771816-7771848)
chr5 (1-33)||(11734814-11734846)
chr5 (1-33)||(17331422-17331454)
chr5 (1-33)||(28040723-28040755)
chr5 (1-33)||(33164463-33164495)
chr5 (1-33)||(39179823-39179855)
[»] scaffold1379 (3 HSPs)
scaffold1379 (61-150)||(1140-1229)
scaffold1379 (61-102)||(1-42)
scaffold1379 (1-33)||(69-101)
[»] scaffold0155 (1 HSPs)
scaffold0155 (61-145)||(35065-35149)
[»] scaffold0056 (1 HSPs)
scaffold0056 (61-133)||(74159-74231)
[»] scaffold0536 (1 HSPs)
scaffold0536 (61-150)||(2878-2969)
[»] scaffold0321 (1 HSPs)
scaffold0321 (61-128)||(7178-7245)
[»] scaffold0001 (1 HSPs)
scaffold0001 (61-150)||(404312-404401)
[»] scaffold0432 (1 HSPs)
scaffold0432 (61-148)||(2471-2557)
[»] scaffold0121 (2 HSPs)
scaffold0121 (62-150)||(13300-13392)
scaffold0121 (1-33)||(13240-13272)
[»] scaffold0288 (1 HSPs)
scaffold0288 (520-557)||(20818-20855)
[»] scaffold0580 (2 HSPs)
scaffold0580 (67-144)||(840-915)
scaffold0580 (67-144)||(8579-8654)


Alignment Details
Target: chr1 (Bit Score: 112; Significance: 2e-56; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 295 - 481
Target Start/End: Original strand, 49325940 - 49326127
Alignment:
Q  295 tttcaaaaaattggagaagaaacttctaacctaggaataatatagcggaaacattgggtggtgcggcgatgtaaccacgaaaaatctcacggctaaa-ca 393  Q
    |||| ||||||||||||||||||| |||||| ||| |||||| |||||  |||||||||||||| |||||| |||||| |  ||||||||||||||| ||    
T  49325940 tttcgaaaaattggagaagaaactcctaaccaagggataatacagcggcgacattgggtggtgcagcgatgcaaccacaacgaatctcacggctaaatca 49326039  T
Q  394 ggggaaggcatgtatctcgcagtggtgatcccttcatgtactattttaatgattaaaattgtggtttctatagactcataaaatcgat 481  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  49326040 ggggaaggcgtgtatcttgcagtagtgatcccttcatgtactattttaaggattaaaattatggtttctatagactcataaaatcgat 49326127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 424345 - 424434
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||| ||||||||||||||  |||||||||||||    
T  424345 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 424434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 7995614 - 7995703
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||  |||||||||||||    
T  7995614 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggagaggtgatttttgggtcaaaattgaccctaaatcacccctct 7995703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 32784175 - 32784088
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 148  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||| ||||||||||||||  |||||||||||    
T  32784175 tatgtgaaatcacttattcaataaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccct 32784088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 3232855 - 3232770
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||  |||||||||    
T  3232855 tatgtgaaatcatttattcaattaggatagaaggaaaaacaattcggaggggtgattttttgatcaaaattgaccctaaatcaccc 3232770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 33487088 - 33487173
Alignment:
Q  65 tgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||  |||||||||||||    
T  33487088 tgaaatcacatattcaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 33487173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 12871688 - 12871599
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||| | ||||||| || ||||||||| |||||||||||| |||| ||||||||||||||  |||||||||||||    
T  12871688 tatgtgaaatcacttattcgattaggatataatgaaaaacaactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 12871599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 14265351 - 14265266
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    |||||||||||||||||| || |||||||||||||||||||  |||||||||||| ||||| |||||||||||||  |||||||||    
T  14265351 tatgtgaaatcacttatttaattaggatagaaggaaaaacagctcggaggggtgatttttttgtcaaaattgaccctaaatcaccc 14265266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 28678184 - 28678273
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||| | |||| |||| ||||||||||||||  |||||||||||||    
T  28678184 tatgtgaaatcacttattcaattatgatagaacgaaaaacaattcggacgagtgatttttgggtcaaaattgaccctaaatcacccctct 28678273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 42490960 - 42490871
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| || ||||||| |||||||||||||||||||||| |||| ||||||| ||||||  |||||||| ||||    
T  42490960 tatgtgaaatcacttattcaattaagatagaacgaaaaacaattcggaggggtgatttttaggtcaaacttgaccctaaatcacctctct 42490871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 20411640 - 20411555
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||||||||||||||||||| | | ||| || ||||||||||||||| |||||| |||| ||||||||||||||| |||||||||    
T  20411640 tatgtgaaatcacttattcaatttgaataaaaagaaaaacaattcggatgggtgatttttgggtcaaaattgaccataaatcaccc 20411555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 27534766 - 27534677
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| || | ||||||||||||||| |||||||| ||| |||| ||||||||||||||  |||||| ||||||    
T  27534766 tatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggagggatgatttttgggtcaaaattgaccctaaatcatccctct 27534677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 146
Target Start/End: Complemental strand, 29205348 - 29205267
Alignment:
Q  65 tgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||||||||||||||| || ||||||||||||||||||||  |||||||| |||| ||||||||||||||  |||||||||    
T  29205348 tgaaatcacttattcaattatgatagaaggaaaaacaattccaaggggtgatttttgggtcaaaattgaccctaaatcaccc 29205267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 37822399 - 37822471
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattga 133  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| || |||| | |||| ||||||||||||    
T  37822399 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcagaagggtaatttttgggtcaaaattga 37822471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 479 - 548
Target Start/End: Original strand, 49329608 - 49329678
Alignment:
Q  479 gatgtaagcgatcagagaaaatagtttctttaagaa-aaatagggagaatattaaactagagactctacaa 548  Q
    |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||  |||||||||||||    
T  49329608 gatgtaagagatcagagaaaatagtttctttaagaagaaatagagagaatattaaatgagagactctacaa 49329678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 4882413 - 4882486
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgac 134  Q
    ||||||||||||||||||||| ||||||| || ||||||||| |||||||||||| |||| |||| ||||||||    
T  4882413 tatgtgaaatcacttattcaattaggatataatgaaaaacaaatcggaggggtgatttttgggtcgaaattgac 4882486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 44517214 - 44517160
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtga 115  Q
    |||||||||||||||||| || |||||||||||||||||||||||||| ||||||    
T  44517214 tatgtgaaatcacttattgaattaggatagaaggaaaaacaattcggaagggtga 44517160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 18343681 - 18343592
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||||| ||| || || | ||||||||||||||| ||| |||||||| |||| |||||||||||| |  |||||||||||||    
T  18343681 tatgtgaaatcactcatttaattaaggtagaaggaaaaacaaatcgaaggggtgatttttgggtcaaaattgatcctaaatcacccctct 18343592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 33939082 - 33939145
Alignment:
Q  87 atagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||| |||||||||||| ||||||||| |||| ||||||||||||||  |||||||||||||    
T  33939082 atagaaagaaaaacaattcagaggggtgatttttgggtcaaaattgaccctaaatcacccctct 33939145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 45193680 - 45193769
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaagg-aaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| |||||||||||| |||||||| |||||||||| | | || ||| ||||||||||  ||||| |||||||    
T  45193680 tatgtgaaatcacttattcaattaggatagaaggaaaaaacaactcggaggggt-attattgggttaaaattgaccctaaatcgcccctct 45193769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 4871080 - 4871165
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    |||||||||| |||||||||| ||| ||| ||||||||||||||||||| ||||| || |  ||||||||||| |  |||||||||    
T  4871080 tatgtgaaataacttattcaattagaataaaaggaaaaacaattcggagtggtgatttatgagtcaaaattgatcttaaatcaccc 4871165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 13488590 - 13488675
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||| ||||||||||||||| || | | ||||||||||||| ||||| |||||| |||| ||||||||| ||||  |||||||||    
T  13488590 tatgtaaaatcacttattcaattaaggtggaaggaaaaacaaatcggatgggtgatttttgggtcaaaatcgaccctaaatcaccc 13488675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 17347664 - 17347592
Alignment:
Q  62 atgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 135  Q
    ||||||||||||||||||   || |||||||| |||||||| ||||| |||||| |||||||||||||||||||    
T  17347664 atgtgaaatcacttattcctttatgatagaagaaaaaacaactcggatgggtga-tttttggtcaaaattgacc 17347592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 42276423 - 42276335
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||| ||||| || || |||||||| ||||||||||||||||||||| ||||  ||||||| | |||  |||||||||||||    
T  42276423 tatgtgaaatcagttatttaattatgatagaagaaaaaacaattcggaggggtga-ttttgtgtcaaaaataaccctaaatcacccctct 42276335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 45750545 - 45750456
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||| |||||||||| ||||||| |||||||||  | |||||  | ||| |||| ||||||||||||||  |||||||||||||    
T  45750545 tatgtgaaataacttattcaattaggataaaaggaaaaaacaatcggattgatgatttttgggtcaaaattgaccttaaatcacccctct 45750456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 288
Target Start/End: Original strand, 49324400 - 49324457
Alignment:
Q  231 aattgaacttatgattttaatatattttgcatttgttacattgttttattttcataac 288  Q
    |||||||||| ||||||| ||||||||||| ||||||||| ||||| |||||||||||    
T  49324400 aattgaacttgtgattttgatatattttgcgtttgttacactgtttgattttcataac 49324457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 9298474 - 9298519
Alignment:
Q  66 gaaatcacttattcaactaggatagaaggaaaaacaattcggaggg 111  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||||||    
T  9298474 gaaatcaattatttaactaggatagaaggaaaaacaactcggaggg 9298519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 15791270 - 15791302
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||||||||||||    
T  15791270 acaaacagagtcgttcagagacgatgaaatcac 15791302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 51418080 - 51418040
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaa 102  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  51418080 tatgtgaaatcactt-ttcaattaggatagaaggaaaaacaa 51418040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 14265410 - 14265378
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  14265410 acaaacagagtcgttcagagacgacgaaatcac 14265378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 29205411 - 29205379
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  29205411 acaaacagagtcgttcagagacgacgaaatcac 29205379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 29726650 - 29726690
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaaca 101  Q
    ||||||||||||||||||| | ||||||| |||||||||||    
T  29726650 tatgtgaaatcacttattcgattaggatataaggaaaaaca 29726690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 44517273 - 44517241
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  44517273 acaaacagagtcgttcagagacgacgaaatcac 44517241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 7e-32; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 49628149 - 49628239
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattga-ccaaaaatcacccctct 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| |||||||||||||||||    
T  49628149 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcagaggggtgatttttaggtcaaaattgacccaaaaatcacccctct 49628239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 3457010 - 3456921
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||| |||| | ||||||||||||| |||||||||||||    
T  3457010 tatgttaaatcacttattcaattaggatagaaggaaaaacaattcggagaggtgatttttggatcaaaattgaccataaatcacccctct 3456921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 4206573 - 4206662
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||| ||||||||||| ||||||| | ||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  4206573 tatgtgaaaacacttattcaattaggatatatggaaaaacaattcggaggggtgattttttgatcaaaattgaccataaatcacccctct 4206662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 36691861 - 36691950
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||||||||||||| || |||||||||||| |||| ||||||||||||||  |||||||||||||    
T  36691861 tatgtgaaatcacttattcaattaggatagaaggaaaaataactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 36691950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 11819150 - 11819061
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| || | ||||||||||||||| |||||||||||| |||| ||||||||||||||  |||||||||||||    
T  11819150 tatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 11819061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 30156344 - 30156432
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||| |||||||| |||||||||||||||| |||| ||||||||||||||  |||||||||||||    
T  30156344 tatgtgaaatcacttattcaattaggataaaaggaaaa-caattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 30156432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 31270393 - 31270308
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| |||||||| |||| ||||||||||||||  |||||||||    
T  31270393 tatgtgaaatcacttattcaattaggatagaaggaaaaataattcgaaggggtgatttttgggtcaaaattgaccctaaatcaccc 31270308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 31462808 - 31462897
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||| |||||||| |||| ||||||||||||||  |||||||||||||    
T  31462808 tatgtaaaatcacttattcaattaggatataaggaaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaatcacccctct 31462897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 13702034 - 13702123
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| || ||||||| |||||| |||||| |||||||| |||| ||||||||||||||  |||||||||||||    
T  13702034 tatgtgaaatcacttattcaattatgatagaaagaaaaataattcgaaggggtgacttttgggtcaaaattgaccctaaatcacccctct 13702123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 14585529 - 14585440
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||||||||||||||||||  |||| |||| |||| |||||||||||||   |||||||||||||    
T  14585529 tatgtgaaatcacttattcaattaggatagaaggaaaaacaatttagaggagtgatttttgggtcaaaattgactctaaatcacccctct 14585440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 34960920 - 34961009
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||| ||||||||| |||| ||||||||||||||  || ||||||||||    
T  34960920 tatgtgaaatcacttattcaattagaatagaagaaaaaacaattctgaggggtgatttttgggtcaaaattgaccctaagtcacccctct 34961009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 48652502 - 48652591
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| || | ||||||||||||||| |||||||||||| |||| ||||||| ||||||  |||||||||||||    
T  48652502 tatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaagttgaccctaaatcacccctct 48652591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 53155492 - 53155581
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||||||||| || ||||||| |||||||||||||||| | |||||| |||| ||||||||||||||  |||||||||||||    
T  53155492 tatgtgaaatcacttattgaattaggatataaggaaaaacaattcgaatgggtgatttttgggtcaaaattgaccctaaatcacccctct 53155581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 54239080 - 54239167
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 148  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| | |||| |||||| ||||| || |||  |||||||||||    
T  54239080 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggatgtgtgattttttgatcaaatttaaccttaaatcacccct 54239167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 1074962 - 1075044
Alignment:
Q  68 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||||| ||| ||| |||||||||||| ||||| |||||| |||| ||||||||||||||| |||||||||||||    
T  1074962 aatcacttattcaattagaatataaggaaaaacaactcggatgggtgatttttgggtcaaaattgaccataaatcacccctct 1075044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 35174771 - 35174697
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 135  Q
    ||||||||||||||||||||| |||||||||||||||||||||||  |||||||| |||| |||| |||||||||    
T  35174771 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcaaaggggtgatttttgggtcgaaattgacc 35174697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 32080816 - 32080901
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||||||||||| ||||||| || | ||||||||||||||| |||||||||||| |||| ||||||||||||||  |||||||||    
T  32080816 tatgtgaaatcacctattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgaccctaaatcaccc 32080901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 48400966 - 48400877
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||||||||| || |||| |||||||||||||||||| || | |||| |||| ||||||||||||||  |||||||||||||    
T  48400966 tatgtgaaatcacttattaaaatagggtagaaggaaaaacaattccgatgtgtgatttttgggtcaaaattgaccctaaatcacccctct 48400877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 27189456 - 27189545
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||| | || | |||| | |||||||||||   |||||||||||||    
T  27189456 tatgtgaaattacttattcaattaggatagaaggaaaaacaattcggaagagtaatttttggatcaaaattgactctaaatcacccctct 27189545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 36624756 - 36624845
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||||||||| |  |||||||||||||||||||||||||| |||||| |||| |||||  |||||||   ||||||||||||    
T  36624756 tatgtgaaatcacttatttagttaggatagaaggaaaaacaattcggatgggtgatttttgggtcatgattgaccctgaatcacccctct 36624845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 53402691 - 53402614
Alignment:
Q  67 aaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcac 144  Q
    |||||||||||| || ||| |||||||||||||||||||||| |||||| |||| ||||||||||||||  |||||||    
T  53402691 aaatcacttattgaattagaatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgaccttaaatcac 53402614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 39610279 - 39610182
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaa--------aaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||||||||||        |||||| |||||||||||| | || ||||||||||||||| |||||||||||||    
T  39610279 tatgtgaaatcacttattcaattaggatagaaggaagaaaaaaaaaacaactcggaggggtgattattgggtcaaaattgaccataaatcacccctct 39610182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 22485032 - 22484961
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattg 132  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||| | |||| |||| |||||||||||    
T  22485032 tatgcgaaatcacttattcaattaggatagaaggaaaaacaatccggaagagtgatttttgggtcaaaattg 22484961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 40013334 - 40013410
Alignment:
Q  61 tatgtgaaatcacttattcaactagga---tagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgac 134  Q
    ||||||||||||||||||||| |||||   ||||||||||||||||||| | |||||| |||| |||||||||||||    
T  40013334 tatgtgaaatcacttattcaattaggaggatagaaggaaaaacaattcgaatgggtgatttttgggtcaaaattgac 40013410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 19645288 - 19645203
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    |||||||||||||||||| || ||||| ||||| |||||||||||||| || ||  |||| ||||||||||||||  |||||||||    
T  19645288 tatgtgaaatcacttatttaattaggacagaagaaaaaacaattcggatggatggtttttaggtcaaaattgaccctaaatcaccc 19645203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 55090645 - 55090734
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||||||||| || || | ||||||||||||||| |||||||||||| |||| |||  ||||| |||  |||||||||||||    
T  55090645 tatgtgaaatcacttatttaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggttgaaattaaccctaaatcacccctct 55090734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 24483740 - 24483813
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgac 134  Q
    ||||||||||||||||||||| || ||||||| |||||||||||| || |||||| || |  ||||||||||||    
T  24483740 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcagatgggtgatttgtgtgtcaaaattgac 24483813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 38527330 - 38527241
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||| |||||||| || ||||||||||||||||||| ||| | |||| |||| | |||| ||||| |  |||||||||||||    
T  38527330 tatgtgaaatcatttattcaattaagatagaaggaaaaacaatttggatgtgtgatttttggttcaagattgatcctaaatcacccctct 38527241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 64 - 148
Target Start/End: Original strand, 40883933 - 40884018
Alignment:
Q  64 gtgaaatcacttattcaactaggatagaagg-aaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 148  Q
    |||||||||||||||||| ||||||| |||| |||||||||||| |  | ||| |||| ||||||||||||||  |||||||||||    
T  40883933 gtgaaatcacttattcaattaggataaaaggaaaaaacaattcgaattgatgatttttgggtcaaaattgaccctaaatcacccct 40884018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 99
Target Start/End: Original strand, 41868356 - 41868394
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaa 99  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  41868356 tatgtgaaatcacttattcaattaggatagaaggaaaaa 41868394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 4817892 - 4817944
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggt 113  Q
    ||||||||||||| ||||||| ||||||| || ||||||||||| ||||||||    
T  4817892 tatgtgaaatcacctattcaattaggataaaaagaaaaacaatttggaggggt 4817944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 48854939 - 48854889
Alignment:
Q  95 aaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacc 145  Q
    |||||||| |||||||||||| |||| ||| |||||||||| |||||||||    
T  48854939 aaaaacaaatcggaggggtgatttttgggttaaaattgacccaaaatcacc 48854889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 11819209 - 11819177
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  11819209 acaaacagagtcgttcagagacgacgaaatcac 11819177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 14585588 - 14585556
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  14585588 acaaacagagtcgttcagagacgaggaaatcac 14585556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 31462749 - 31462781
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  31462749 acaaacagagtcgttcagagacgacgaaatcac 31462781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 35174830 - 35174798
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  35174830 acaaacagagtcgttcagagacgacgaaatcac 35174798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 53402747 - 53402715
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    ||||||| |||||||||||||||||||||||||    
T  53402747 acaaacaaagtcgttcagagacgatgaaatcac 53402715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 3e-31; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 37612720 - 37612631
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||  |||||||||||||    
T  37612720 tatgtgaaatcacttattcaactaggatagaaggaaaaaaaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 37612631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 41361799 - 41361712
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 148  Q
    ||||||||||||||||||||| || | ||||||||||||||| |||||||||||| |||| ||||||||||||||| |||||||||||    
T  41361799 tatgtgaaatcacttattcaattacggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgaccataaatcacccct 41361712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 10338884 - 10338969
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||  |||||||||||||  |||||||||    
T  10338884 tatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtgatttttgcgtcaaaattgaccttaaatcaccc 10338969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 31407810 - 31407899
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||| | ||| |||| ||||||||||||||  |||||||||||||    
T  31407810 tatgtgaaatcatttattcaactatgatagaaggaaaaacaattcggagagatgatttttgggtcaaaattgaccctaaatcacccctct 31407899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 2025272 - 2025360
Alignment:
Q  62 atgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||||||||||| ||| ||| |||||||||||| | ||| |||||| |||||||||||||||||||| |||||||||||||    
T  2025272 atgtgaaatcacttattcaattagaataaaaggaaaaacaacttggaagggtgattttttggtcaaaattgaccataaatcacccctct 2025360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 2234532 - 2234602
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaatt 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||||||||    
T  2234532 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcgaaggggtgatttttggatcaaaatt 2234602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 24791230 - 24791319
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||| |||||||||||| || ||||||| |||||||||||||||||| || ||| |||| ||||||||||||||| |||||||||||||    
T  24791230 tatgttaaatcacttattgaattaggatataaggaaaaacaattcggatggatgatttttgggtcaaaattgaccataaatcacccctct 24791319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 10148014 - 10147924
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaa-caattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||| |||||||||||| | || ||||||||||||||  |||||||||||||    
T  10148014 tatgtgaaatcacttattcaattaggatagaagaaaaaaacaactcggaggggtgattattgggtcaaaattgaccctaaatcacccctct 10147924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 30026942 - 30027031
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| || |||||||| |||||||| ||||| |||||| |||| |||||||| |||||  |||||||||||||    
T  30026942 tatgtgaaatcacttattcaattatgatagaagaaaaaacaactcggatgggtgatttttgggtcaaaaatgaccctaaatcacccctct 30027031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 39067751 - 39067840
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||||||||| || |||||||||||||||||||||| |||   |||| |||| ||||||||||||||  |||||||||||||    
T  39067751 tatgtgaaatcacttattaaattaggatagaaggaaaaacaatttggaacagtgatttttgggtcaaaattgaccttaaatcacccctct 39067840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 1810283 - 1810370
Alignment:
Q  62 atgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||| || ||||||||||| ||||| ||| ||||||||||| |||| ||||||||||||||  |||||||||||||    
T  1810283 atgtgaaatcacttattgaattaggatagaagaaaaaaaaat-cggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 1810370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 37128548 - 37128600
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37128548 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggatgggt 37128600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 23971156 - 23971226
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaatt 131  Q
    ||||||||||||||||||||| ||| |||||||||||||||| ||||| | |||| |||||||||||||||    
T  23971156 tatgtgaaatcacttattcaattagaatagaaggaaaaacaactcggatgagtgattttttggtcaaaatt 23971226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 9501657 - 9501572
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaagga-aaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacc 145  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||| || |||||| |||| | ||||||||||||  ||||||||    
T  9501657 tatgtgaaatcacttattcaattaggatagaaggaaaaaacaattcagatgggtgatttttggatcaaaattgaccctaaatcacc 9501572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 14600760 - 14600849
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||| |||||||| ||||||||||| |||||||| ||||| || ||| |||| ||||||||||||||  |||||||| ||||    
T  14600760 tatgtgaaatcagttattcaattaggatagaagaaaaaacaactcggatggatgatttttgggtcaaaattgaccctaaatcacctctct 14600849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 1039955 - 1040029
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 135  Q
    |||||||||||||||||| || ||| |||||||||||| ||||||||| |||||| |||| | ||||||||||||    
T  1039955 tatgtgaaatcacttattgaattagaatagaaggaaaaccaattcggatgggtgatttttggatcaaaattgacc 1040029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 12329693 - 12329620
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgac 134  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||| |  ||||| |||| | |||||||||||    
T  12329693 tatgtgaaatcacttattcaattaggataaaaggaaaaacaattcgaaatggtgatttttggatcaaaattgac 12329620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 31202525 - 31202440
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||||||||||||||||||| ||  |||||| ||||||||||| ||| || ||| |||| ||||||||||||||  |||||||||    
T  31202525 tatgtgaaatcacttattcaattataatagaaagaaaaacaatttggatggatgatttttgggtcaaaattgaccttaaatcaccc 31202440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 11161948 - 11161860
Alignment:
Q  62 atgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||| |||||||||| ||||||| || ||||||||| | | |||||||| |||| ||||||||||||||  |||| ||||||||    
T  11161948 atgtgaaatgacttattcaattaggatataaagaaaaacaacttgaaggggtgatttttgggtcaaaattgaccctaaattacccctct 11161860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 31308215 - 31308167
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggag 109  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  31308215 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggag 31308167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 30039399 - 30039476
Alignment:
Q  66 gaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcac 144  Q
    |||||||| ||||||| ||| | |||||||||||||||||||| | |||| |||| ||||||||||||||| |||||||    
T  30039399 gaaatcacatattcaattagaaaagaaggaaaaacaattcggatgagtga-ttttgggtcaaaattgaccataaatcac 30039476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 13570788 - 13570877
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||||||||| || |||||||||| ||||||||||| ||| |  ||| |||| | |||||||||||   |||||||||||||    
T  13570788 tatgtgaaatcacttatttaattaggatagaatgaaaaacaattgggatgaatgatttttagatcaaaattgactctaaatcacccctct 13570877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 3204818 - 3204890
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgac 134  Q
    |||||||||||||| ||| || ||| ||||| |||||||||||||||| |||| | |||| |||||||||||||    
T  3204818 tatgtgaaatcactcattaaattagaatagatggaaaaacaattcgga-gggtaatttttgggtcaaaattgac 3204890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 7281707 - 7281658
Alignment:
Q  66 gaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtga 115  Q
    |||||||||||||||||||| | |||| ||||||||||||||| ||||||    
T  7281707 gaaatcacttattcaactagaaaagaaagaaaaacaattcggatgggtga 7281658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 7583851 - 7583915
Alignment:
Q  86 gatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||| |||||||||||| ||||| |||||| |||| |||||||||||| |  |||||||||||||    
T  7583851 gataaaaggaaaaacaactcggatgggtgatttttgggtcaaaattgatcctaaatcacccctct 7583915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 24699899 - 24699812
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaa--caattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    |||||||||||||||||| || ||||||| ||| |||||  ||  ||||| |||||| |||| ||||||||||||||  |||||||||    
T  24699899 tatgtgaaatcacttatttaattaggatataagaaaaaaaacatctcggatgggtgatttttgggtcaaaattgaccctaaatcaccc 24699812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 13576260 - 13576326
Alignment:
Q  83 taggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||| ||||||||| |||||||| ||| |||| |||||||||||| |  |||||||||||||    
T  13576260 taggatagaaagaaaaacaactcggagggatga-ttttaggtcaaaattgatcctaaatcacccctct 13576326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 2234473 - 2234505
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  2234473 acaaacagagtcgttcagagacgacgaaatcac 2234505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 3204759 - 3204791
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  3204759 acaaacagagtcgttcagagacgacgaaatcac 3204791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7579858 - 7579890
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  7579858 acaaacagagtcgttcagagacgacgaaatcac 7579890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 15288863 - 15288919
Alignment:
Q  64 gtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttt 120  Q
    |||||||||| |||| || |||||||||| ||||||||||||| |||| ||| ||||    
T  15288863 gtgaaatcacgtatttaattaggatagaaagaaaaacaattcgaagggatgattttt 15288919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 15469232 - 15469288
Alignment:
Q  64 gtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttt 120  Q
    |||||||||| |||| || |||||||||| ||||||||||||| |||| ||| ||||    
T  15469232 gtgaaatcacgtatttaattaggatagaaagaaaaacaattcgaagggatgattttt 15469288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24791171 - 24791203
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  24791171 acaaacagagtcgttcagagacgacgaaatcac 24791203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 30026883 - 30026915
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  30026883 acaaacagagtcgttcagagacgacgaaatcac 30026915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 4e-30; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 31522049 - 31521962
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 148  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||  |||||||||||    
T  31522049 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttttaggtcaaaattgaccctaaatcacccct 31521962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 43244435 - 43244524
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||  |||||||||||||    
T  43244435 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcagaggggtgatttttgggtcaaaattgaccctaaatcacccctct 43244524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 394329 - 394416
Alignment:
Q  62 atgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctc 149  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||| ||||||||||||||  ||||||||||||    
T  394329 atgtgaaatcacttattgaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctc 394416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 7060391 - 7060302
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||  |||| ||||||||    
T  7060391 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttttgggttaaaattgaccctaaattacccctct 7060302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 22757161 - 22757072
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||  |||||||||||||  |||||||||||||    
T  22757161 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggagtggtgatttttgagtcaaaattgaccctaaatcacccctct 22757072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 51152192 - 51152105
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 148  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||| |||||| |||||||  |||||||||||    
T  51152192 tatgtgaaatcacttattaaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaatattgaccntaaatcacccct 51152105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 8712597 - 8712510
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 148  Q
    |||||||||||||||| |||||||||||||||||||||||||||  ||||||||| |||| ||||||||||||||  |||||||||||    
T  8712597 tatgtgaaatcacttactcaactaggatagaaggaaaaacaattatgaggggtgatttttgggtcaaaattgaccctaaatcacccct 8712510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 13965627 - 13965553
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 135  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  13965627 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcgaaggggtgatttttgggtcaaaattgacc 13965553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 24825716 - 24825627
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||| |||| |||| |||||||||||| |  |||||||||||||    
T  24825716 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggagtgatttttaggtcaaaattgatcctaaatcacccctct 24825627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 29268831 - 29268920
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||| |||||||||||| |||||||||||| |||  ||||||||||||||  |||||||||||||    
T  29268831 tatgtgaaatcacttattcaattaggataaaaggaaaaacaactcggaggggtgattttagggtcaaaattgaccttaaatcacccctct 29268920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 44757096 - 44757185
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||| | |||||| |||| ||||||||||||||  |||||||||||||    
T  44757096 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcgaatgggtgatttttgggtcaaaattgaccttaaatcacccctct 44757185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 38944201 - 38944275
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 135  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| || |||||||||||    
T  38944201 tatgtgaaatcacttattcaactacgatagaaggaaaaacaatttggaggggtgatttttgggccaaaattgacc 38944275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 478066 - 478154
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||||||||  ||||| |||| ||||||||||||||| |||||||||||||    
T  478066 tatgtaaaatcacttattcaattaggatataaggaaaaacaattcgga-tggtgatttttgggtcaaaattgaccataaatcacccctct 478154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 24568767 - 24568856
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||||| |||||| |||| |||||||||| |||  |||||||||||||    
T  24568767 tatgtaaaatcacttattcaattaggatagaaggaaaaataattcggaagggtgatttttgggtcaaaattcaccctaaatcacccctct 24568856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 6911747 - 6911658
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| || | ||||||||||||||| |||||| ||||| |||| | ||||||||||||  |||||||||||||    
T  6911747 tatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggagaggtgatttttggatcaaaattgaccctaaatcacccctct 6911658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 11210367 - 11210456
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| || ||| | |||||||| ||||||||||||||| |||| || |||||||||||  |||||||||||||    
T  11210367 tatgtgaaatcacttattcaattatgatgggaggaaaaataattcggaggggtgatttttagggcaaaattgaccctaaatcacccctct 11210456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 24100206 - 24100117
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||| |||| | |||| | |||||||||| |  |||||||||||||    
T  24100206 tatgtgaaatcacttattcaattacgatagaaggaaaaacaattcggatgggtaatttttggttcaaaattgatcctaaatcacccctct 24100117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 26674439 - 26674354
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||| |||||||||||| |  |||||||||    
T  26674439 tatgtgaaatcacttattcaattatgatagaaggaaaagcaatttggaggggtgatttttaggtcaaaattgatcctaaatcaccc 26674354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 26742517 - 26742602
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||| |||||| |||| |||||||||||| |  |||||||||    
T  26742517 tatgtgaaatcacttattcaattaagatagaaagaaaaacaattcggatgggtgatttttgggtcaaaattgatcctaaatcaccc 26742602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 7083870 - 7083944
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 135  Q
    ||||||||||||||||||||| || ||||||||||||||||||||  |||||||| |||| | ||||||||||||    
T  7083870 tatgtgaaatcacttattcaattatgatagaaggaaaaacaattcataggggtgatttttggatcaaaattgacc 7083944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 24611853 - 24611942
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| |||||||||||| ||||  | |  ||||||||| |||| |||| |||||||||| |||||||||||||    
T  24611853 tatgtgaaatcacttattcaattaggatagaagggaaaatgacttagaggggtgatttttgggtctaaattgaccataaatcacccctct 24611942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 25658234 - 25658145
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||||||||| || ||||| |||||||||||||||| |||| ||||| ||||  ||||||||| |||  |||||||||||||    
T  25658234 tatgtgaaatcacttattaaattaggaaagaaggaaaaacaatttggagaggtgatttttgagtcaaaattaaccctaaatcacccctct 25658145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 67 - 148
Target Start/End: Complemental strand, 27394891 - 27394810
Alignment:
Q  67 aaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 148  Q
    |||| |||||||||| ||||||||||||||||| ||| |||| |||||| |||| ||||||||||||||  |||||||||||    
T  27394891 aaattacttattcaattaggatagaaggaaaaataatccggaagggtgatttttgggtcaaaattgaccctaaatcacccct 27394810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 30202105 - 30202016
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| || |||| |||||||||||| | | |||||||| |||| | ||||||||||||  |||||||||||||    
T  30202105 tatgtgaaatcacttattcaattaagataaaaggaaaaacaactagaaggggtgatttttggatcaaaattgaccttaaatcacccctct 30202016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 43493341 - 43493394
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtg 114  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  43493341 tatgtgaaatcacttattcaattaagatagaaggaaaaacaattcggaggggtg 43493394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 7861259 - 7861331
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattga 133  Q
    |||||||||||||||||| || ||||||||||||||||| ||||| ||| ||||| |||| ||||||||||||    
T  7861259 tatgtgaaatcacttatttaattaggatagaaggaaaaataattcagagtggtgatttttgggtcaaaattga 7861331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 22049464 - 22049543
Alignment:
Q  66 gaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    |||||||||||||||| |||||||||||||||||||||||| | |||||| |||| |||||||||| |||  |||||||||    
T  22049464 gaaatcacttattcaattaggatagaaggaaaaacaattcgaaagggtga-ttttgggtcaaaattaaccctaaatcaccc 22049543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 65 - 135
Target Start/End: Original strand, 20399961 - 20400031
Alignment:
Q  65 tgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 135  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||  |||||| |||| ||||||||||||||    
T  20399961 tgaaatcacttattcaattaggatagaagaaaaagcaattcgggtgggtgatttttgggtcaaaattgacc 20400031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 39837662 - 39837572
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaa-ggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||| || ||||||| || ||| |||||||| |||| |||||||||||||   |||||||||||||    
T  39837662 tatgtgaaatcacttattcaattaggataaaagggaaaaaaaaatcgaaggggtgatttttgggtcaaaattgacgctaaatcacccctct 39837572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 19745456 - 19745369
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 148  Q
    |||||||||||| |||||||| ||||||| ||| |||||||||||||| |  ||| |||| |||||||||||| |  |||||||||||    
T  19745456 tatgtgaaatcaattattcaattaggataaaagcaaaaacaattcggatgaatgatttttgggtcaaaattgatcctaaatcacccct 19745369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 19794350 - 19794437
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 148  Q
    |||||||||||| |||||||| ||||||| ||| |||||||||||||| |  ||| |||| |||||||||||| |  |||||||||||    
T  19794350 tatgtgaaatcaattattcaattaggataaaagcaaaaacaattcggatgaatgatttttgggtcaaaattgatcctaaatcacccct 19794437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 29922904 - 29922812
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaagg---aaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| |||||||||| |   |||||||| | |||||||||| | || ||||||||||||||  |||||||| ||||    
T  29922904 tatgtgaaatcacttattcaattaggatagaaagaaaaaaaacaacttggaggggtgattattaggtcaaaattgaccctaaatcacctctct 29922812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 50801284 - 50801214
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaatt 131  Q
    ||||||||||||||||||||| ||||||| ||||||||| |||||||||| || | |||| | ||||||||    
T  50801284 tatgtgaaatcacttattcaattaggataaaaggaaaaataattcggaggagttatttttagatcaaaatt 50801214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 6882023 - 6881958
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtca 126  Q
    |||||||||||||||||| || ||||||||||||||||| || ||| |||||||| |||| |||||    
T  6882023 tatgtgaaatcacttatttaattaggatagaaggaaaaataactcgaaggggtgatttttgggtca 6881958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 5814414 - 5814330
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacc 145  Q
    |||||||||| |||||||||| || ||||||||| ||||||| | |||||| ||| |||| | ||||||||||||  ||||||||    
T  5814414 tatgtgaaataacttattcaattaagatagaagggaaaacaacttggagggatgatttttggatcaaaattgaccctaaatcacc 5814330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 45351124 - 45351200
Alignment:
Q  61 tatgtgaaatcacttattcaact-aggatagaaggaaaa-acaattcggaggggtgagtttttggtcaaaattgacc 135  Q
    ||||||||||||||||||||| | || ||| |||||||| ||||||||||||||||| |||| | ||||||||||||    
T  45351124 tatgtgaaatcacttattcaaattagaataaaaggaaaaaacaattcggaggggtgatttttggatcaaaattgacc 45351200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 45360603 - 45360679
Alignment:
Q  61 tatgtgaaatcacttattcaact-aggatagaaggaaaa-acaattcggaggggtgagtttttggtcaaaattgacc 135  Q
    ||||||||||||||||||||| | || ||| |||||||| ||||||||||||||||| |||| | ||||||||||||    
T  45360603 tatgtgaaatcacttattcaaattagaataaaaggaaaaaacaattcggaggggtgatttttggatcaaaattgacc 45360679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 2447867 - 2447813
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtga 115  Q
    ||||||||||||||||||||| ||||||||||  ||||| |||||| ||||||||    
T  2447867 tatgtgaaatcacttattcaattaggatagaaaaaaaaataattcgaaggggtga 2447813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 39523475 - 39523433
Alignment:
Q  62 atgtgaaatcacttattcaactaggatagaaggaaaaacaatt 104  Q
    |||||||||||||||||||| ||||||| ||||||||||||||    
T  39523475 atgtgaaatcacttattcaattaggataaaaggaaaaacaatt 39523433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 7084273 - 7084184
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||| |||||||||||||| || | ||||||||||||||| ||||| |  | | |||| |||||||||||| |  |||||||||||||    
T  7084273 tatgtgcaatcacttattcaattaaggtagaaggaaaaacaaatcggaagcataatttttgggtcaaaattgaacctaaatcacccctct 7084184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 20887810 - 20887883
Alignment:
Q  62 atgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 135  Q
    ||||||||||||||||| || || |||||||  || || |||||||| |||||| |||| ||||||||||||||    
T  20887810 atgtgaaatcacttattgaattaagatagaaaaaataataattcggatgggtgatttttgggtcaaaattgacc 20887883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 12717177 - 12717244
Alignment:
Q  66 gaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgac 134  Q
    ||||||||||||| || ||||||||||| |||||||| ||||| || ||| |||| |||||||||||||    
T  12717177 gaaatcacttatttaattaggatagaagaaaaaacaagtcggacggatga-ttttgggtcaaaattgac 12717244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 148
Target Start/End: Complemental strand, 42197616 - 42197533
Alignment:
Q  64 gtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 148  Q
    ||||| ||||||||| || ||||||||||||||||| ||||||||   |||| ||||| ||||||||| |||  |||||||||||    
T  42197616 gtgaagtcacttattaaattaggatagaaggaaaaataattcgga-aagtgatttttttgtcaaaattaaccctaaatcacccct 42197533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 28837120 - 28837072
Alignment:
Q  83 taggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattga 133  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||||||||    
T  28837120 taggatagaaggaaaaacaa--cggatgggtgattttttggtcaaaattga 28837072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 626609 - 626690
Alignment:
Q  68 aatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||||| || |||||||| ||||| ||||| || |||||| |||| ||||||||||  ||  |||||||||||||    
T  626609 aatcacttattcaattatgatagaag-aaaaataattcagatgggtgatttttgggtcaaaattagccctaaatcacccctct 626690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 36124401 - 36124479
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaa 139  Q
    |||||||||||| | |||||| || ||||| ||||||||||||| ||| | |||| |||| | |||||||| |||||||    
T  36124401 tatgtgaaatcaatcattcaattaagataggaggaaaaacaattgggatgagtgatttttggatcaaaattaaccaaaa 36124479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7083811 - 7083843
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  7083811 acaaacagagtcgttcagagacgacgaaatcac 7083843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 11210308 - 11210340
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  11210308 acaaacagagtcgttcagagacgacgaaatcac 11210340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 20887751 - 20887783
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  20887751 acaaacagagtcgttcagagacgacgaaatcac 20887783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30202164 - 30202132
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  30202164 acaaacagagtcgttcagagacgacgaaatcac 30202132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 38944143 - 38944175
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  38944143 acaaacagagtcgttcagagacgacgaaatcac 38944175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 43493282 - 43493314
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  43493282 acaaacagagtcgttcagagacgacgaaatcac 43493314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 50801343 - 50801311
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  50801343 acaaacagagtcgttcagagacgacgaaatcac 50801311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 61 - 147
Target Start/End: Original strand, 17473777 - 17473863
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccc 147  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||    
T  17473777 tatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtgattttttggtcaaaattgaccctaaatcacccc 17473863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 61 - 147
Target Start/End: Complemental strand, 17579437 - 17579351
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccc 147  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||    
T  17579437 tatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtgattttttggtcaaaattgaccctaaatcacccc 17579351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 21603529 - 21603441
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||  |||||||||||||||||||  |||||||||||||    
T  21603529 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcagaggggtg-ctttttggtcaaaattgaccctaaatcacccctct 21603441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 36579366 - 36579455
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||  |||||| ||||||    
T  36579366 tatgtggaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgattttcgggtcaaaattgaccctaaatcatccctct 36579455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 9785384 - 9785297
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 148  Q
    ||||||||||||||||||||| || ||||||||||||||||||||| |||||||| |||| ||||||||||||||  |||||||||||    
T  9785384 tatgtgaaatcacttattcaattaagatagaaggaaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaatcacccct 9785297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 11833086 - 11832996
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcgga-ggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||| |||| ||||||||||||||| |||||| ||||||    
T  11833086 tatgtgaaatcacttattcaattaggaaagaaggaaaaacaattcggagggggtgatttttgggtcaaaattgaccataaatcatccctct 11832996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 28664966 - 28665051
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||  ||||||||||||||  |||||||||    
T  28664966 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtgattttagggtcaaaattgaccctaaatcaccc 28665051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 42603823 - 42603912
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| || ||||||| |||||||||||||||||||||| ||||  |||||||||||||| |||||||| ||||    
T  42603823 tatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggaggggtgatttttgagtcaaaattgaccataaatcaccgctct 42603912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 45457610 - 45457699
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||| |||| ||||  |||||||||||||  |||||||||||||    
T  45457610 tatgtgaaatcacttattcaattaagatagaaggaaaaacaattcggaggagtgatttttgcgtcaaaattgaccctaaatcacccctct 45457699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 5684432 - 5684345
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 148  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||| ||||| ||||  |||||||||||||  |||||||||||    
T  5684432 tatgtgaaatcacttattcaattaggatagaatgaaaaacaattcggagaggtgatttttgcgtcaaaattgaccctaaatcacccct 5684345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 5709482 - 5709395
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 148  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||| ||||| ||||  |||||||||||||  |||||||||||    
T  5709482 tatgtgaaatcacttattcaattaggatagaatgaaaaacaattcggagaggtgatttttgcgtcaaaattgaccctaaatcacccct 5709395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 21990729 - 21990639
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaa-caattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| |||||||| |||||||| |||||||||||||||| ||||  |||||||||||||  |||||||||||||    
T  21990729 tatgtgaaatcacttattcaattaggatagcaggaaaaaacaattcggaggggtgatttttcagtcaaaattgaccctaaatcacccctct 21990639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 17509258 - 17509346
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||| ||||||||| |||||||| |||||| |||||||||||||||||||  |||||| ||||||    
T  17509258 tatgtgaaatcacttattcaattaggataaaaggaaaaataattcgga-gggtgattttttggtcaaaattgaccctaaatcatccctct 17509346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 17543956 - 17543868
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||| ||||||||| |||||||| |||||| |||||||||||||||||||  |||||| ||||||    
T  17543956 tatgtgaaatcacttattcaattaggataaaaggaaaaataattcgga-gggtgattttttggtcaaaattgaccctaaatcatccctct 17543868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 46026083 - 46026172
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||| |||| |||||||||| |||||||||||||||||||||||||| | |||| |||| ||||||||||||||  |||||||||||||    
T  46026083 tatgttaaataacttattcaattaggatagaaggaaaaacaattcggatgtgtgatttttgggtcaaaattgaccctaaatcacccctct 46026172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 48304453 - 48304538
Alignment:
Q  65 tgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||| |||||| |||| ||||||||||||||  |||||||||||||    
T  48304453 tgaaatcacttattcaattaggatagcaggaaaagcaattcggatgggtgatttttgggtcaaaattgaccctaaatcacccctct 48304538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 32740820 - 32740746
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtga-gtttttggtcaaaattgac 134  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||  |||||||  ||||||||||||||||||    
T  32740820 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcgagggggtgatttttttggtcaaaattgac 32740746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 1281191 - 1281276
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||||||||||||||||||| ||| ||| || ||||||||||||||| |||||| |||||||||||||| ||||  |||||||||    
T  1281191 tatgtgaaatcacttattcaattagaatataatgaaaaacaattcggatgggtgattttttggtcaaaatggaccctaaatcaccc 1281276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 27535523 - 27535434
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||| ||| ||| |||||||||||||||||||||| |||||| |||| | | ||||||||||  |||||||||||||    
T  27535523 tatgtgaaatcacttatacaattagaatagaaggaaaaacaattcggatgggtgatttttggataaaaattgaccctaaatcacccctct 27535434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 39533029 - 39533114
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||||||||||||||||||| || |||||||||||||||||||| ||| | ||| |||| ||||||||||||||  |||||||||    
T  39533029 tatgtgaaatcacttattcaattaagatagaaggaaaaacaattcagagagatgatttttgggtcaaaattgaccctaaatcaccc 39533114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 45482131 - 45482042
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||||||||| || |||||||||||||||||||  |||||||||||| |||  ||||||||||||||  ||||||| |||||    
T  45482131 tatgtgaaatcacttatttaattaggatagaaggaaaaacagctcggaggggtgattttggggtcaaaattgaccctaaatcactcctct 45482042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 22747562 - 22747648
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 148  Q
    ||||| ||||||||||||||| |||||||||||| ||||||| | |||||||||| |||| ||||||||||||||  |||||||||||    
T  22747562 tatgtcaaatcacttattcaattaggatagaagg-aaaacaacttggaggggtgatttttgggtcaaaattgaccctaaatcacccct 22747648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 6667463 - 6667373
Alignment:
Q  61 tatgtgaaatcacttattcaact-aggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| | || ||||||| ||||||||||||| ||||||| |||| ||||||||||||||  ||||||| |||||    
T  6667463 tatgtgaaatcacttattcaaattagaatagaagaaaaaacaattcggtggggtgatttttgggtcaaaattgaccctaaatcactcctct 6667373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 10574448 - 10574363
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||| |||||  |||||||| ||||||| ||||||||||||||||||||||||| ||||  |||||||||||||  |||||||||    
T  10574448 tatgtaaaatcgtttattcaattaggataaaaggaaaaacaattcggaggggtgatttttgagtcaaaattgaccctaaatcaccc 10574363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 42644743 - 42644654
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| |||||||||||||||||||||||  | | |||| ||||  ||||||||||| |  |||||||||||||    
T  42644743 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcaaatgagtgatttttgagtcaaaattgatcctaaatcacccctct 42644654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 43847137 - 43847083
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtga 115  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  43847137 tatgtgaaatcacttattcaattaggataagaggaaaaacaattcggaggggtga 43847083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 134
Target Start/End: Complemental strand, 2622655 - 2622586
Alignment:
Q  65 tgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgac 134  Q
    |||||| |||||||||| || ||||||||||||||||||||||| | |||| |||| |||||||||||||    
T  2622655 tgaaattacttattcaattaagatagaaggaaaaacaattcggatgcgtgatttttgggtcaaaattgac 2622586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 3266455 - 3266360
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaagg------aaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||||||||      |||||||| |||||||| ||| | || | ||||||||||||| |||||||||||||    
T  3266455 tatgtgaaatcacttattcaattaggatagaaggaagaaaaaaaacaactcggagggatgattattggatcaaaattgaccataaatcacccctct 3266360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 10094508 - 10094461
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcgga 108  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  10094508 tatgtgaaatcacttattcaattaggataaaaggaaaaacaattcgga 10094461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 15674666 - 15674712
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcgg 107  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  15674666 tatgtgaaatcacttattcaattaggataggaggaaaaacaattcgg 15674712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 41288025 - 41287935
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaagga-aaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||| ||||||| ||||||||||||| ||||  | ||||| |||||| | || ||||||||||||||  |||||||||||||    
T  41288025 tatgtgaaatcacctattcaattaggatagaaggaaaaaatcactcggatgggtgattattgggtcaaaattgaccctaaatcacccctct 41287935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 40761626 - 40761567
Alignment:
Q  91 aaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||| ||||||||||||| |||| ||||||||||||||  |||||| ||||||    
T  40761626 aaggaaaaacagttcggaggggtgatttttgggtcaaaattgaccctaaatcatccctct 40761567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 24320277 - 24320351
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 135  Q
    |||||||||||||||||| || || ||||||||||||||||| ||| | | |||| ||||  |||||||||||||    
T  24320277 tatgtgaaatcacttattaaattaagatagaaggaaaaacaactcgaatgagtgatttttgagtcaaaattgacc 24320351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 26161106 - 26161074
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||||||||||||    
T  26161106 acaaacagagtcgttcagagacgatgaaatcac 26161074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 36719628 - 36719680
Alignment:
Q  94 gaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    |||||||||||||||||||||| |||| | ||||||||||||  |||||||||    
T  36719628 gaaaaacaattcggaggggtgatttttggatcaaaattgaccctaaatcaccc 36719680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 146
Target Start/End: Complemental strand, 39707351 - 39707272
Alignment:
Q  66 gaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||| ||||||| || |||||||||| ||||||||| |||||| | ||| |||| ||||||||||||||  |||||||||    
T  39707351 gaaataacttatttaattaggatagaaagaaaaacaactcggagtgatga-ttttgggtcaaaattgaccctaaatcaccc 39707272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 17221696 - 17221643
Alignment:
Q  96 aaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||| ||||||||| ||||||||||||||| || | |||||||||||||    
T  17221696 aaaacaattcagaggggtga-tttttggtcaaaattcactataaatcacccctct 17221643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 4621425 - 4621494
Alignment:
Q  65 tgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgac 134  Q
    ||||||| ||||||||| || | ||||||||||||||| ||| | | |||| |||| |||||||||||||    
T  4621425 tgaaatcgcttattcaattatggtagaaggaaaaacaactcgaaagagtgatttttaggtcaaaattgac 4621494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 1281132 - 1281164
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  1281132 acaaacagagtcgttcagagacgacgaaatcac 1281164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 14657877 - 14657917
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaaca 101  Q
    |||||||||| |||||||||| || ||||||||||||||||    
T  14657877 tatgtgaaataacttattcaattaagatagaaggaaaaaca 14657917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24320218 - 24320250
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||| ||||||||||||||||||    
T  24320218 acaaacagagtcgtgcagagacgatgaaatcac 24320250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 36253056 - 36253024
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  36253056 acaaacagagtcgttcagagacgacgaaatcac 36253024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 36719547 - 36719579
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  36719547 acaaacagagtcgttcagagacgacgaaatcac 36719579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 45457551 - 45457583
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    ||||||| |||||||||||||||||||||||||    
T  45457551 acaaacaaagtcgttcagagacgatgaaatcac 45457583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 6204 - 6115
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||| ||||||||||||||  |||||||||||||    
T  6204 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 6115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 7e-29; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 14783225 - 14783314
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||  |||||| ||||||    
T  14783225 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggcgtgatttttgggtcaaaattgaccctaaatcagccctct 14783314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 21507862 - 21507951
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| ||||||||||||||  |||||||||||||    
T  21507862 tatgtgaaatcacttattcaactaggatagaaggaaaaacaatttggaggggtgatgtttgggtcaaaattgaccctaaatcacccctct 21507951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 15590133 - 15590222
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| |||| ||||||||||||||  |||||||||||||    
T  15590133 tatgtgaaatcacttattcaattaggatagaagaaaaaacaattcagaggggtgatttttgggtcaaaattgaccctaaatcacccctct 15590222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 6419912 - 6420001
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| |||||||||||||||||||| || ||||||||| |||| | ||||||||||||  |||||||||||||    
T  6419912 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcagaggggtgatttttggatcaaaattgaccctaaatcacccctct 6420001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 8693711 - 8693803
Alignment:
Q  61 tatgtgaaatcacttattcaactagga---tagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| |||||   ||||||||||||||||||||| |||||| |||| ||||||||||||||  |||||||||||||    
T  8693711 tatgtgaaatcacttattcaattaggaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgaccttaaatcacccctct 8693803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 12481424 - 12481513
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| || | ||||||||||||||| |||||||||||| |||| |||||||||||| |  |||||||||||||    
T  12481424 tatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgatcctaaatcacccctct 12481513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 31937473 - 31937557
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||| |||||||| |||||  |||||||||    
T  31937473 tatgtgaaatcacttattcaattaggatagaag-aaaaacaattcggaggggtgatttttgggtcaaaactgaccctaaatcaccc 31937557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 23654317 - 23654228
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||  || | ||||||||||||||| ||||| |||||| |||| ||||||||||||||  |||||||| ||||    
T  23654317 tatgtgaaatcacttattcagttaaggtagaaggaaaaacaaatcggatgggtgatttttgggtcaaaattgaccctaaatcacctctct 23654228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 29927447 - 29927516
Alignment:
Q  75 tattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcac 144  Q
    ||||||| |||||||||||||||||||| | ||||| |||| |||| ||||||||||||||| |||||||    
T  29927447 tattcaattaggatagaaggaaaaacaacttggaggagtgatttttgggtcaaaattgaccataaatcac 29927516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 4085060 - 4084996
Alignment:
Q  86 gatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||||| || ||| |||| ||||||||||||||  |||||||||||||    
T  4085060 gatagaaggaaaaacaattcggaaggatgatttttcggtcaaaattgaccctaaatcacccctct 4084996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 517 - 557
Target Start/End: Complemental strand, 4660693 - 4660653
Alignment:
Q  517 atagggagaatattaaactagagactctacaatgtgcacca 557  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4660693 atagggagaatattaaactagagactctacaatgtgcacca 4660653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 2304864 - 2304953
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| || || |||||| ||||||| || ||||| ||| |||| ||||||||| || |  |||||||||||||    
T  2304864 tatgtgaaatcacttattcaattatgacagaagggaaaacaactcagagggttgatttttgggtcaaaatcgatcctaaatcacccctct 2304953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 15175873 - 15175797
Alignment:
Q  67 aaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcac 144  Q
    |||||||||||| || ||  |||||| |||||||| ||||||||||||| |||| |||||||||||||| ||||||||    
T  15175873 aaatcacttatttaagtaaaatagaaagaaaaacatttcggaggggtga-ttttgggtcaaaattgaccgaaaatcac 15175797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 144
Target Start/End: Original strand, 15470295 - 15470371
Alignment:
Q  67 aaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcac 144  Q
    |||||||||||| || ||  |||||| |||||||| ||| ||||||||| |||| |||||||||||||||||||||||    
T  15470295 aaatcacttatttaagtaaaatagaaagaaaaacatttcagaggggtga-ttttgggtcaaaattgaccaaaaatcac 15470371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 149
Target Start/End: Original strand, 19402862 - 19402950
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctc 149  Q
    ||||||||||||||| ||||| || |||| |||||||||||| ||  |||||||| |||| | |||||| |||||  ||||||||||||    
T  19402862 tatgtgaaatcacttgttcaattatgatacaaggaaaaacaactcaaaggggtgatttttggatcaaaagtgacccgaaatcacccctc 19402950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 149
Target Start/End: Original strand, 35219958 - 35220045
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctc 149  Q
    ||||||| ||||||||||| | | |||||||||||||| ||| | |||||||||| ||||  |||||||||||||  ||||||||||||    
T  35219958 tatgtgatatcacttattcgattcggatagaaggaaaa-caacttggaggggtgatttttgagtcaaaattgaccctaaatcacccctc 35220045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 4921935 - 4922023
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattc--ggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 148  Q
    ||||||||||||||||||||| || |||||||||||||| | | |  |||||||| | |||| ||||||||||||||  |||||||||||    
T  4921935 tatgtgaaatcacttattcaattaagatagaaggaaaaaaactactgggaggggt-atttttgggtcaaaattgaccctaaatcacccct 4922023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 4393837 - 4393778
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttt 120  Q
    ||||||||||||||| ||| | |||||||||||| ||||||| || ||||||||| ||||    
T  4393837 tatgtgaaatcacttgttctattaggatagaaggtaaaacaactcagaggggtgattttt 4393778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 6296303 - 6296395
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaagg-aaaaacaattcggaggggtgagttttt--ggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||| ||||||||||| |||| ||||||| |||||||||||||| |  ||| |||||  |||||||||| ||   |||||||||||||    
T  6296303 tatgtgaaaccacttattcaattagggtagaaggaaaaaacaattcggaagaatgatttttttaggtcaaaattaactctaaatcacccctct 6296395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 6303113 - 6303205
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaagg-aaaaacaattcggaggggtgagttttt--ggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||| ||||||||||| |||| ||||||| |||||||||||||| |  ||| |||||  |||||||||| ||   |||||||||||||    
T  6303113 tatgtgaaaccacttattcaattagggtagaaggaaaaaacaattcggaagaatgatttttttaggtcaaaattaactctaaatcacccctct 6303205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 23101374 - 23101403
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaat 30  Q
    ||||||||||||||||||||||||||||||    
T  23101374 acaaacagagtcgttcagagacgatgaaat 23101403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 15590074 - 15590106
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  15590074 acaaacagagtcgttcagagacgacgaaatcac 15590106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 19402803 - 19402835
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  19402803 acaaacagagtcgttcagagacgacgaaatcac 19402835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 23654376 - 23654344
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  23654376 acaaacagagtcgttcagagacgacgaaatcac 23654344  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 31705291 - 31705259
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  31705291 acaaacagagtcgttcagagacgacgaaatcac 31705259  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 31937585 - 31937629
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattc 105  Q
    ||||| ||||||||||||||| ||||||||| | |||||||||||    
T  31937585 tatgttaaatcacttattcaattaggatagatgaaaaaacaattc 31937629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 7e-29; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 5754355 - 5754266
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||  |||||||||||||    
T  5754355 tatgtgaaatcatttattcaactaggatagaaggaaaaacaattcggagggatgatttttgggtcaaaattgaccctaaatcacccctct 5754266  T

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Target: chr2; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 63 - 150
Target Start/End: Original strand, 43474184 - 43474271
Alignment:
Q  63 tgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||| ||||||||||||||  |||||||||||||    
T  43474184 tgtgaaatcacttattcaattaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgaccctaaatcacccctct 43474271  T

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Target: chr2; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 11937912 - 11938002
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaa-ggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| ||||||||||||||  |||||||||||||    
T  11937912 tatgtgaaatcacttattcaattaggatagaaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 11938002  T

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Target: chr2; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 12704754 - 12704665
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||| |||||||| |||| ||||||||||||||  |||||||||||||    
T  12704754 tatgtgaaatcacttattcaattaggatataaggaaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaatcacccctct 12704665  T

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Target: chr2; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 17268178 - 17268267
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||| |||| ||| |||| ||||||||||||||| |||||||||||||    
T  17268178 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcgaagggatgatttttgggtcaaaattgaccataaatcacccctct 17268267  T

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Target: chr2; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 27095772 - 27095687
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||| ||||||||||||||  |||||||||    
T  27095772 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggaggggtgatttttaggtcaaaattgaccctaaatcaccc 27095687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 44942352 - 44942267
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||||||||| |||| ||||||||||||||| |||||||||    
T  44942352 tatgtgaaatcacttattcaattaggatagaagaaaaaacaactcggaggggtgatttttgggtcaaaattgaccataaatcaccc 44942267  T

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Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 34416815 - 34416889
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 135  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||||||||||||||    
T  34416815 tatgtgaaatcacttattcaattaggatataaggaaaaacaattcggagggatgattttttggtcaaaattgacc 34416889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 9690027 - 9690116
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||| |||| ||||||| ||||||  |||||||||||||    
T  9690027 tatgtgagatcacttattcaattaggatagaaggaaaaacagttcggaggggtgatttttgggtcaaatttgaccttaaatcacccctct 9690116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 15919941 - 15919852
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||| |||||||| |||||||||||||||||||| |||||||||||| |||| |||||||||||||   |||||||||||||    
T  15919941 tatgtgaaatcatttattcaattaggatagaaggaaaaacaactcggaggggtgatttttgggtcaaaattgactctaaatcacccctct 15919852  T

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Target: chr2; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 20561186 - 20561275
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||| ||||||||| | | ||||||||||||||||||||||||||||||| |||| ||||||||||||||  |||||||||||||    
T  20561186 tatgtgaaaccacttattcgatttggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 20561275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 22597202 - 22597113
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||||||||| || |||||||||||||||||||| |||||||| ||| |||| ||||||||||||||  |||||||||||||    
T  22597202 tatgtgaaatcacttatttaattaggatagaaggaaaaacaactcggagggatgatttttgggtcaaaattgaccttaaatcacccctct 22597113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 18089446 - 18089535
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||||| |||| |||| | ||||||||||||  |||||||||||||    
T  18089446 tatgtgaaatcacttattcaattaggatataagaaaaaacaattcggaggagtgatttttggatcaaaattgaccctaaatcacccctct 18089535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 25067919 - 25067830
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||  |||||||||||||||| |||||||||||| |||| ||||||||||||||  |||||||| ||||    
T  25067919 tatgtgaaatcacttattcaattaaaatagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacctctct 25067830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 33012144 - 33012059
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||| | |||| |||| ||||||||||||||  |||||||||    
T  33012144 tatgtgaaatcacttattcaattagaatagaaggaaaaacaattcggatgagtgatttttgggtcaaaattgaccctaaatcaccc 33012059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 13740718 - 13740801
Alignment:
Q  65 tgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctc 149  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||||||| |||||| |||||| |||||    
T  13740718 tgaaatcacttattcaattaggatagaaggaaaaacaattcggagtggtgatttttgggtcaaaa-tgaccataaatcatccctc 13740801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 38384497 - 38384585
Alignment:
Q  62 atgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||||||||||| |||| || |||||||||||| ||||||  |||| |||| |||||||||||||| ||||||||||||||    
T  38384497 atgtgaaatcacttattcaattagggtataaggaaaaacaaatcggagatgtgatttttgggtcaaaattgacccaaaatcacccctct 38384585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 9978723 - 9978812
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||| |||||||| || |||| |||||||||||||| | |||||||| |||| ||||||||||||||  |||||||||||||    
T  9978723 tatgtgaaatcatttattcaattaagataaaaggaaaaacaatttgaaggggtgatttttgggtcaaaattgaccttaaatcacccctct 9978812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 31908870 - 31908943
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgac 134  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||| |||||| |||| | |||||||||||    
T  31908870 tatgtgaaatcacttattcaactaggataaaagaaaaaacaattcggaagggtgatttttggatcaaaattgac 31908943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 36868075 - 36867986
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||| |||||| || ||| ||||||||||||||||||| ||||||||| ||||  |||||||||||||  |||||||||||||    
T  36868075 tatgtgaaatcgcttattgaattagaatagaaggaaaaacaattcagaggggtgatttttgagtcaaaattgaccctaaatcacccctct 36867986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 38535359 - 38535448
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| || |||||||||||||| |||||  |||||||  |||| ||||||||||||||  |||||||||||||    
T  38535359 tatgtgaaatcacttattcaattatgatagaaggaaaaaaaattcaaaggggtgctttttgggtcaaaattgaccctaaatcacccctct 38535448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 34963121 - 34963208
Alignment:
Q  62 atgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||||||||||| |||| ||||||||||||||| || || |||||| |||| |||||||||||||| ||||| ||||||||    
T  34963121 atgtgaaatcacttattcaattagggtagaaggaaaaacaaatcaga-gggtgatttttaggtcaaaattgacccaaaattacccctct 34963208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 35333572 - 35333500
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattga 133  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||  |||||||| |||| ||||||||||||    
T  35333572 tatgtgaaatcacttattcaattaggatagcaggaaaaacaattcttaggggtgatttttgggtcaaaattga 35333500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 63 - 150
Target Start/End: Original strand, 7073004 - 7073091
Alignment:
Q  63 tgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||| | |||||||||| |||||||||||||||| ||||||| | ||| || |||| ||||||||||||||  |||||||||||||    
T  7073004 tgtgaagttacttattcaattaggatagaaggaaaaccaattcgaaagggcgatttttgggtcaaaattgaccctaaatcacccctct 7073091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 28231151 - 28231205
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtga 115  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||| ||||||    
T  28231151 tatgtgaaatcacttattcaaccaagatagaaggaaaaacaattcggatgggtga 28231205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 4604361 - 4604446
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||||||||||||||||||| ||| |||||||||||||||| ||| | | || | |||| ||||||||||||||  |||||||||    
T  4604361 tatgtgaaatcacttattcaattagaatagaaggaaaaacaactcgaatgagtaatttttgggtcaaaattgaccttaaatcaccc 4604446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 32015262 - 32015198
Alignment:
Q  86 gatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||| |||||||||||| |||||||||||| |||| ||||||||||||||  |||||||||||||    
T  32015262 gatataaggaaaaacaactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 32015198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 10287060 - 10287133
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 135  Q
    ||||||||||||||||||||| ||||||| || ||||  |||||||||||||||| ||||  |||||||||||||    
T  10287060 tatgtgaaatcacttattcaattaggata-aaagaaatgcaattcggaggggtgatttttatgtcaaaattgacc 10287133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 4739396 - 4739310
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctc 149  Q
    |||||||||| ||||||| || |||||| ||||||||||||| |||||||||||| |||  ||||  ||||||||  ||||||||||||    
T  4739396 tatgtgaaattacttatttaattaggatggaaggaaaaacaactcggaggggtgattttggggtc--aattgaccctaaatcacccctc 4739310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 34471033 - 34470957
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggg--gtgagtttttggtcaaaattgacc 135  Q
    |||||||||||||| |||||| || ||||||| || |||||||||||||||  |||| |||| ||||||||||||||    
T  34471033 tatgtgaaatcactgattcaattaagatagaaagataaacaattcggaggggtgtgatttttgggtcaaaattgacc 34470957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 13879060 - 13879157
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaagg--------aaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||||||||        |||||||| |||||||||||| | || ||||||||||||||  |||||| ||||||    
T  13879060 tatgtgaaatcacttattcaattaggatagaaggaagaaaaaaaaaacaactcggaggggtgattattgggtcaaaattgaccctaaatcatccctct 13879157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 14019185 - 14019282
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaagg--------aaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||||||||        |||||||| |||||||||||| | || ||||||||||||||  |||||| ||||||    
T  14019185 tatgtgaaatcacttattcaattaggatagaaggaagaaaaaaaaaacaactcggaggggtgattattgggtcaaaattgaccctaaatcatccctct 14019282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 28261972 - 28262032
Alignment:
Q  86 gatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||||||||||||||||||||| | |||| |||| ||||||||||||||  |||||||||    
T  28261972 gatagaaggaaaaacaattcggatgagtgatttttgggtcaaaattgaccctaaatcaccc 28262032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 108
Target Start/End: Original strand, 4426712 - 4426759
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcgga 108  Q
    |||||||||||| |||||||| |||||||||||||||||||| |||||    
T  4426712 tatgtgaaatcatttattcaattaggatagaaggaaaaacaaatcgga 4426759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 32314509 - 32314462
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcgga 108  Q
    |||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  32314509 tatgtgaaatcatttattcaattaggatagaagaaaaaacaattcgga 32314462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 97
Target Start/End: Complemental strand, 4732138 - 4732102
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaa 97  Q
    ||||||||||||||||||||| |||||||||||||||    
T  4732138 tatgtgaaatcacttattcaattaggatagaaggaaa 4732102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7072943 - 7072975
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||||||||||||    
T  7072943 acaaacagagtcgttcagagacgatgaaatcac 7072975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 17767611 - 17767678
Alignment:
Q  66 gaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgac 134  Q
    ||||||||||||| || ||||||| |||||||||||| ||| |||||||| || | |||||||||||||    
T  17767611 gaaatcacttatttaattaggatataaggaaaaacaactcgaaggggtga-ttctgggtcaaaattgac 17767678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 17116490 - 17116544
Alignment:
Q  91 aaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    |||||||||||||||||| || ||| |||| ||||||||||||||| |||||||||    
T  17116490 aaggaaaaacaattcggacggatga-ttttaggtcaaaattgaccataaatcaccc 17116544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 11798576 - 11798653
Alignment:
Q  66 gaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcac 144  Q
    ||||| ||||||| || ||||||| |||||||| |||   |||||||||| |||| ||||||||||||||| |||||||    
T  11798576 gaaattacttatttaattaggatataaggaaaagcaacatggaggggtga-ttttgggtcaaaattgaccataaatcac 11798653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 4732196 - 4732164
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    ||||||||| |||||||||||||||||||||||    
T  4732196 acaaacagattcgttcagagacgatgaaatcac 4732164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 9978664 - 9978696
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  9978664 acaaacagagtcgttcagagacgacgaaatcac 9978696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 12891188 - 12891232
Alignment:
Q  106 ggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||    
T  12891188 ggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 12891232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 20561127 - 20561159
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  20561127 acaaacagagtcgttcagagacgacgaaatcac 20561159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 25067978 - 25067946
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  25067978 acaaacagagtcgttcagagacgacgaaatcac 25067946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 29542918 - 29542886
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  29542918 acaaacagagtcgttcagagacgacgaaatcac 29542886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 34963071 - 34963103
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  34963071 acaaacagagtcgttcagagacgacgaaatcac 34963103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 4e-27; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 17699619 - 17699537
Alignment:
Q  62 atgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcac 144  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||  |||||||    
T  17699619 atgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcac 17699537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 17331395 - 17331306
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||||||||| |||| ||||||||||||||  |||||||||||||    
T  17331395 tatgtgaaatcacttattcaattaagatagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 17331306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 6281111 - 6281022
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||||| |||| ||||||||||||||| |||||||||||||    
T  6281111 tatgtaaaatcacttattcaattagaatagaaggaaaaataattcagaggggtgatttttgggtcaaaattgaccataaatcacccctct 6281022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 27241131 - 27241046
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||||| || |||||||||    
T  27241131 tatgtgaaatcacttattcaattaggataaaaggaaaaacaattcagaggggtgatttttgggtcaaaattgatcataaatcaccc 27241046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 28040696 - 28040607
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||| |||||||||| ||| |||||||||| |||| ||||||||||||||  |||||||||||||    
T  28040696 tatgtgaaatcacttattcaattaggatataaggaaaaacgatttggaggggtgatttttgggtcaaaattgaccgtaaatcacccctct 28040607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 33164522 - 33164611
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| || | ||||||||||||||||||||||| |||| ||||  |||||||||||||| |||||||||||||    
T  33164522 tatgtgaaatcacttattcaattaaggtagaaggaaaaacaattcggaggagtgatttttgagtcaaaattgaccataaatcacccctct 33164611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 43493939 - 43493850
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||| |||| | ||||||||||||  |||||||||||||    
T  43493939 tatgtgaaatcacttattcaattagaatagaaggaaaaacaattcggagaggtgatttttggatcaaaattgaccctaaatcacccctct 43493850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 32347768 - 32347858
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaagg-aaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| |||||||||||| |||||||| |||||||||||| |||| ||||||| ||||||  |||||||||||||    
T  32347768 tatgtgaaatcacttattcaattaggatagaaggaaaaaacaagtcggaggggtgatttttgggtcaaagttgaccctaaatcacccctct 32347858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 42609211 - 42609127
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacc 145  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||| | |||| |||| ||||||||||||||  ||||||||    
T  42609211 tatgtgaaatcacttattcaattaggatagaagaaaaaacaattcggatgagtgatttttaggtcaaaattgaccctaaatcacc 42609127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 29097856 - 29097769
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 148  Q
    ||||||||||||||||||||| || | ||||||||||||||| ||||||||||||  ||| ||||||||||||||  |||||||||||    
T  29097856 tatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatctttgggtcaaaattgaccctaaatcacccct 29097769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 26295118 - 26295201
Alignment:
Q  67 aaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||| |||| | ||||||||||||  |||||||| ||||    
T  26295118 aaatcacttattcaataaggatagaaggaaaaacacttcggaggggtgatttttggatcaaaattgaccctaaatcacctctct 26295201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 12439692 - 12439757
Alignment:
Q  65 tgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaatt 131  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||| |||| ||||||||||    
T  12439692 tgaaatcacttattcaactaggatagaatgaaaaacaattcgga-gggtgatttttaggtcaaaatt 12439757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 17096293 - 17096385
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaagg---aaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| ||||||||||||   |||||||| | |||||||||| | || ||||||||||||||  |||||||||||||    
T  17096293 tatgtgaaatcacttattcaattaggatagaaggaaaaaaaacaactgggaggggtgattattgggtcaaaattgaccctaaatcacccctct 17096385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 7771888 - 7771949
Alignment:
Q  89 agaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||  |||||||||||||    
T  7771888 agaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 7771949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 61 - 145
Target Start/End: Original strand, 178160 - 178244
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacc 145  Q
    ||||||||||||||||||||| ||||||| ||||||| |||| |||||| ||||| ||||  |||||||||||||  ||||||||    
T  178160 tatgtgaaatcacttattcaattaggatataaggaaacacaactcggagaggtgatttttgagtcaaaattgaccttaaatcacc 178244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 6635317 - 6635227
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggag-gggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| || ||||||||||||||||| || ||| |||||| |||| ||||||||||| ||  |||||| ||||||    
T  6635317 tatgtgaaatcacttattcaattatgatagaaggaaaaacaactcagagagggtgatttttgggtcaaaattggccctaaatcatccctct 6635227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 34431127 - 34431053
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 135  Q
    ||||||||||||||||||||| ||  ||||||| |||||||||||| | |||||| |||| ||||||||||||||    
T  34431127 tatgtgaaatcacttattcaattaaaatagaagaaaaaacaattcgaatgggtgatttttgggtcaaaattgacc 34431053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 39179882 - 39179936
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtga 115  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||    
T  39179882 tatgtgaaatcacttattcaattagaatagaaggaaaaataattcggaggggtga 39179936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 39531457 - 39531540
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||||||||||||||||||| || ||||||||| ||||||| |||||||| ||| |||| ||||||||||||||  |||||||||    
T  39531457 tatgtgaaatcacttattcaattacgatagaagg-aaaacaactcggagggatga-ttttgggtcaaaattgaccttaaatcaccc 39531540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 981079 - 981164
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcaccc 146  Q
    ||||||||||||||  ||||| || ||||||||||||||||| ||||||||| || | || |||||||||||| |  |||||||||    
T  981079 tatgtgaaatcactcgttcaattatgatagaaggaaaaacaactcggaggggcgattattgggtcaaaattgatcctaaatcaccc 981164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 3740424 - 3740336
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| || || ||| ||||  ||||||||| |||  ||||||| |||||    
T  3740424 tatgtgaaatcacttattcaattaggatagaagg-aaaacaattcagatggatgatttttgagtcaaaattaaccctaaatcacacctct 3740336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 20483253 - 20483165
Alignment:
Q  61 tatgtgaaatcacttattc-aactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctc 149  Q
    ||||||||||||||||||| || ||| ||| |||||||||||||| ||| |||||| |||| |||||||||||| |  ||||||||||||    
T  20483253 tatgtgaaatcacttattcaaattagaataaaaggaaaaacaatttgga-gggtgatttttgggtcaaaattgatcctaaatcacccctc 20483165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 3079359 - 3079414
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgag 116  Q
    ||||| ||||||||||||||| || |||| |||||||||||| |||||||||||||    
T  3079359 tatgttaaatcacttattcaattatgatataaggaaaaacaaatcggaggggtgag 3079414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 23882170 - 23882259
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||| ||||||||||||||| | |||||||| ||||||||||| |||  | ||| ||||   ||||||||||||  |||||||||||||    
T  23882170 tatgtcaaatcacttattcaatttggatagaaagaaaaacaatttggattgatgatttttgaatcaaaattgaccctaaatcacccctct 23882259  T

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Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 17687272 - 17687225
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcgga 108  Q
    |||||||||| |||||||||| || ||||||||||||||||| |||||    
T  17687272 tatgtgaaataacttattcaattaagatagaaggaaaaacaactcgga 17687225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 42396566 - 42396640
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgacc 135  Q
    ||||||||||| ||||||||| || |||||||| ||||| |||||| |  | ||| |||| ||||||||||||||    
T  42396566 tatgtgaaatcgcttattcaattaagatagaagaaaaaataattcgaaaagatgatttttgggtcaaaattgacc 42396640  T

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Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 98
Target Start/End: Complemental strand, 12891743 - 12891706
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaa 98  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  12891743 tatgtgaaatcacttattcaattaggataaaaggaaaa 12891706  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 6635376 - 6635344
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  6635376 acaaacagagtcgttcagagacgacgaaatcac 6635344  T

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Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7771816 - 7771848
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  7771816 acaaacagagtcgttcagagacgacgaaatcac 7771848  T

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Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 11734814 - 11734846
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  11734814 acaaacagagtcgttcagagacgacgaaatcac 11734846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 17331454 - 17331422
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  17331454 acaaacagagtcgttcagagacgacgaaatcac 17331422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 28040755 - 28040723
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  28040755 acaaacagagtcgttcagagacgacgaaatcac 28040723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 33164463 - 33164495
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  33164463 acaaacagagtcgttcagagacgacgaaatcac 33164495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 39179823 - 39179855
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  39179823 acaaacagagtcgttcagagacgacgaaatcac 39179855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 62; Significance: 2e-26; HSPs: 3)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 1140 - 1229
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| |||| ||||||||||||||  |||||||||||||    
T  1140 tatgtgaaatcacttattcaattagggtagaaggaaaaacaattcgcaggggtgatttttgggtcaaaattgaccttaaatcacccctct 1229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 42 - 1
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaa 102  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  42 tatgtgaaatcacttattcaattaagatagaaggaaaaacaa 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 101 - 69
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  101 acaaacagagtcgttcagagacgacgaaatcac 69  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 35149 - 35065
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacc 145  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| |||| ||||||||||||||  ||||||||    
T  35149 tatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggatgggtgatttttgggtcaaaattgaccctaaatcacc 35065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 74231 - 74159
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattga 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||| ||||||||||||    
T  74231 tatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattga 74159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 2969 - 2878
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaagga--aaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| |||||||||||||  ||||||| |||||||||||| | || ||||||||||||||  |||||||||||||    
T  2969 tatgtgaaatcacttattcaattaggatagaaggaaaaaaacaactcggaggggtgattattgggtcaaaattgaccctaaatcacccctct 2878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 7178 - 7245
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaa 128  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||| |||||||    
T  7178 tatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggaggggtgatttttgggtcaaa 7245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 404312 - 404401
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    ||||||||||||||||||||| |||||||| | ||||||| ||||||| |||||| |||| | ||||||||||||  ||||| |||||||    
T  404312 tatgtgaaatcacttattcaattaggatagcaagaaaaactattcggatgggtgatttttggatcaaaattgaccttaaatcgcccctct 404401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 2471 - 2557
Alignment:
Q  61 tatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccct 148  Q
    ||||||||||||||||||| | || ||||||||||||||||| || || |||||| |||| |||||||| |||||  |||||||||||    
T  2471 tatgtgaaatcacttattcgattatgatagaaggaaaaacaactcaga-gggtgatttttgggtcaaaaatgaccctaaatcacccct 2557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 13300 - 13392
Alignment:
Q  62 atgtgaaatcacttattcaactaggat----agaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcacccctct 150  Q
    |||||||||||||||||||| ||||||    | ||  ||||||||||||||||||||| |||| | ||||||||||||  |||||||| ||||    
T  13300 atgtgaaatcacttattcaattaggataaaaaaaaaaaaaaacaattcggaggggtgatttttggatcaaaattgaccctaaatcacctctct 13392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 13240 - 13272
Alignment:
Q  1 acaaacagagtcgttcagagacgatgaaatcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  13240 acaaacagagtcgttcagagacgacgaaatcac 13272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0288 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 520 - 557
Target Start/End: Complemental strand, 20855 - 20818
Alignment:
Q  520 gggagaatattaaactagagactctacaatgtgcacca 557  Q
    |||||||| |||||||||||||||||||||||||||||    
T  20855 gggagaattttaaactagagactctacaatgtgcacca 20818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 144
Target Start/End: Original strand, 840 - 915
Alignment:
Q  67 aaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcac 144  Q
    |||||||||||| || ||  |||||| |||||||| ||||||||| ||| ||||  ||||||||||||||||||||||    
T  840 aaatcacttatttaagtaaaatagaaagaaaaacatttcggaggg-tga-ttttgagtcaaaattgaccaaaaatcac 915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 144
Target Start/End: Original strand, 8579 - 8654
Alignment:
Q  67 aaatcacttattcaactaggatagaaggaaaaacaattcggaggggtgagtttttggtcaaaattgaccaaaaatcac 144  Q
    |||||||||||| || ||  |||||| |||||||| ||||||||| ||| ||||  ||||||||||||||||||||||    
T  8579 aaatcacttatttaagtaaaatagaaagaaaaacatttcggaggg-tga-ttttgagtcaaaattgaccaaaaatcac 8654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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