View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11384_high_3 (Length: 453)

Name: NF11384_high_3
Description: NF11384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11384_high_3
NF11384_high_3
[»] chr7 (55 HSPs)
chr7 (1-139)||(56330-56468)
chr7 (5-139)||(20478042-20478176)
chr7 (5-139)||(27666055-27666189)
chr7 (5-145)||(29996504-29996644)
chr7 (20-139)||(35401969-35402088)
chr7 (20-139)||(35403589-35403708)
chr7 (20-139)||(20479689-20479808)
chr7 (3-139)||(39859217-39859353)
chr7 (20-140)||(77984-78104)
chr7 (20-136)||(27664433-27664549)
chr7 (3-140)||(6602334-6602471)
chr7 (3-139)||(37115514-37115650)
chr7 (20-139)||(13169653-13169772)
chr7 (33-146)||(24228427-24228540)
chr7 (3-136)||(34776903-34777036)
chr7 (20-139)||(47384294-47384413)
chr7 (19-136)||(37796185-37796302)
chr7 (3-139)||(38474131-38474267)
chr7 (20-136)||(39857648-39857764)
chr7 (3-140)||(30940413-30940550)
chr7 (3-140)||(45359335-45359472)
chr7 (20-144)||(37113936-37114060)
chr7 (79-138)||(29994907-29994966)
chr7 (20-138)||(24226582-24226700)
chr7 (33-139)||(47386227-47386333)
chr7 (22-140)||(23904582-23904700)
chr7 (24-140)||(38549546-38549662)
chr7 (3-117)||(13168142-13168259)
chr7 (20-139)||(22155817-22155936)
chr7 (20-139)||(22211732-22211851)
chr7 (22-136)||(48227913-48228027)
chr7 (50-136)||(6605397-6605483)
chr7 (20-139)||(46437107-46437226)
chr7 (78-140)||(23906295-23906357)
chr7 (19-129)||(33038801-33038911)
chr7 (19-90)||(366747-366818)
chr7 (32-83)||(7401949-7402000)
chr7 (24-135)||(35691431-35691542)
chr7 (3-102)||(45463707-45463806)
chr7 (19-129)||(46996706-46996816)
chr7 (26-130)||(13039618-13039722)
chr7 (20-139)||(34774998-34775117)
chr7 (33-93)||(35693388-35693450)
chr7 (20-139)||(45361246-45361365)
chr7 (19-129)||(27955380-27955490)
chr7 (37-129)||(38613503-38613595)
chr7 (41-129)||(47341712-47341800)
chr7 (108-139)||(35693434-35693465)
chr7 (19-89)||(2167529-2167599)
chr7 (19-129)||(23953815-23953925)
chr7 (3-76)||(4322560-4322633)
chr7 (19-92)||(11682828-11682901)
chr7 (87-136)||(13018036-13018085)
chr7 (20-93)||(35344295-35344368)
chr7 (33-129)||(46812600-46812696)
[»] chr8 (57 HSPs)
chr8 (7-143)||(27691150-27691286)
chr8 (5-142)||(27406907-27407044)
chr8 (5-146)||(33708814-33708954)
chr8 (20-139)||(601674-601793)
chr8 (14-139)||(13108355-13108480)
chr8 (3-139)||(8609795-8609931)
chr8 (3-139)||(13282478-13282614)
chr8 (5-121)||(15305815-15305931)
chr8 (5-121)||(15486184-15486300)
chr8 (20-144)||(33762683-33762807)
chr8 (50-139)||(29237151-29237240)
chr8 (50-139)||(29239187-29239276)
chr8 (20-147)||(8608229-8608357)
chr8 (3-139)||(38547228-38547364)
chr8 (20-139)||(27692807-27692926)
chr8 (20-139)||(33761069-33761188)
chr8 (20-139)||(38548801-38548920)
chr8 (20-138)||(33707207-33707325)
chr8 (3-136)||(42941777-42941910)
chr8 (20-139)||(35509214-35509333)
chr8 (20-139)||(35510789-35510908)
chr8 (50-139)||(13106804-13106893)
chr8 (50-139)||(15308261-15308350)
chr8 (50-139)||(15488630-15488719)
chr8 (20-136)||(13283965-13284081)
chr8 (20-139)||(42943396-42943515)
chr8 (3-136)||(26242322-26242455)
chr8 (3-139)||(41042592-41042728)
chr8 (20-139)||(26238726-26238845)
chr8 (33-136)||(41825682-41825785)
chr8 (50-136)||(27404213-27404299)
chr8 (140-201)||(18645752-18645813)
chr8 (3-141)||(22272332-22272472)
chr8 (33-139)||(13486137-13486243)
chr8 (58-140)||(34681074-34681156)
chr8 (33-138)||(5036446-5036551)
chr8 (3-139)||(7745120-7745256)
chr8 (20-139)||(22273861-22273980)
chr8 (20-139)||(41823890-41824009)
chr8 (80-140)||(600759-600819)
chr8 (14-126)||(9673184-9673296)
chr8 (20-139)||(5038032-5038150)
chr8 (71-139)||(13484545-13484613)
chr8 (20-139)||(43262107-43262226)
chr8 (3-129)||(28433704-28433830)
chr8 (19-129)||(31821428-31821538)
chr8 (20-139)||(41040720-41040839)
chr8 (19-93)||(11788367-11788441)
chr8 (3-93)||(40020623-40020713)
chr8 (19-129)||(42897778-42897888)
chr8 (19-76)||(37526027-37526084)
chr8 (33-129)||(462388-462484)
chr8 (33-129)||(32822371-32822467)
chr8 (33-129)||(33160166-33160262)
chr8 (19-103)||(33750388-33750472)
chr8 (20-102)||(31201148-31201230)
chr8 (19-76)||(9184446-9184503)
[»] chr5 (39 HSPs)
chr5 (5-139)||(29621771-29621905)
chr5 (5-143)||(42473597-42473735)
chr5 (5-136)||(40780553-40780684)
chr5 (32-139)||(24541229-24541336)
chr5 (9-139)||(2854321-2854450)
chr5 (3-139)||(17574318-17574454)
chr5 (5-140)||(36057603-36057738)
chr5 (20-139)||(40782181-40782300)
chr5 (3-141)||(7267841-7267979)
chr5 (20-139)||(2852886-2853005)
chr5 (50-145)||(7269446-7269541)
chr5 (20-139)||(21842962-21843081)
chr5 (20-139)||(29620138-29620257)
chr5 (33-139)||(34327635-34327741)
chr5 (20-139)||(12738706-12738825)
chr5 (20-139)||(12801529-12801648)
chr5 (20-142)||(8541241-8541363)
chr5 (14-139)||(2179787-2179912)
chr5 (20-137)||(17577905-17578022)
chr5 (3-139)||(8539675-8539811)
chr5 (50-139)||(30463900-30463989)
chr5 (3-140)||(30468268-30468405)
chr5 (50-139)||(42471548-42471637)
chr5 (1-136)||(18624994-18625129)
chr5 (20-139)||(28813735-28813856)
chr5 (20-136)||(28822060-28822176)
chr5 (20-139)||(34328797-34328916)
chr5 (19-129)||(18728606-18728716)
chr5 (48-129)||(43492131-43492212)
chr5 (33-129)||(38596878-38596974)
chr5 (32-83)||(27075876-27075927)
chr5 (19-93)||(32087560-32087634)
chr5 (19-129)||(35395343-35395453)
chr5 (19-129)||(43318064-43318174)
chr5 (50-139)||(32134231-32134320)
chr5 (52-136)||(41493847-41493931)
chr5 (19-129)||(33256410-33256520)
chr5 (32-93)||(19997164-19997225)
chr5 (99-139)||(28819348-28819388)
[»] chr1 (50 HSPs)
chr1 (5-139)||(9121658-9121792)
chr1 (5-139)||(47013072-47013206)
chr1 (2-136)||(33602631-33602765)
chr1 (5-139)||(46583546-46583680)
chr1 (5-139)||(4855956-4856090)
chr1 (3-139)||(34778126-34778262)
chr1 (20-139)||(46582010-46582129)
chr1 (50-139)||(34776569-34776658)
chr1 (20-141)||(37345932-37346053)
chr1 (20-139)||(8167942-8168061)
chr1 (20-139)||(8169538-8169657)
chr1 (20-139)||(25276742-25276861)
chr1 (50-139)||(26223587-26223676)
chr1 (20-139)||(9120039-9120158)
chr1 (20-139)||(27089249-27089368)
chr1 (33-139)||(31238513-31238619)
chr1 (14-139)||(2869579-2869704)
chr1 (3-139)||(6818666-6818802)
chr1 (3-139)||(25278356-25278492)
chr1 (3-142)||(37344339-37344478)
chr1 (20-139)||(47011456-47011575)
chr1 (37-146)||(25278975-25279084)
chr1 (20-139)||(1444151-1444270)
chr1 (33-139)||(27087283-27087389)
chr1 (50-140)||(4854409-4854499)
chr1 (37-139)||(3013498-3013600)
chr1 (14-139)||(51896151-51896276)
chr1 (3-139)||(50556085-50556221)
chr1 (20-139)||(31236819-31236938)
chr1 (22-128)||(33599229-33599335)
chr1 (20-139)||(52641888-52642007)
chr1 (20-139)||(2871046-2871165)
chr1 (5-61)||(1442599-1442655)
chr1 (48-136)||(52643648-52643736)
chr1 (20-139)||(37088106-37088225)
chr1 (24-138)||(50554164-50554278)
chr1 (78-139)||(33599187-33599248)
chr1 (78-138)||(1442551-1442611)
chr1 (20-136)||(3011858-3011974)
chr1 (78-138)||(6816866-6816926)
chr1 (33-93)||(15104487-15104547)
chr1 (59-139)||(25278854-25278934)
chr1 (20-136)||(51894570-51894686)
chr1 (19-129)||(42134492-42134602)
chr1 (50-139)||(23577636-23577725)
chr1 (79-139)||(45044949-45045009)
chr1 (3-76)||(5783427-5783500)
chr1 (33-89)||(18183961-18184017)
chr1 (33-93)||(36895528-36895588)
chr1 (20-93)||(27940654-27940727)
[»] chr6 (34 HSPs)
chr6 (5-140)||(32455881-32456016)
chr6 (5-121)||(3456766-3456882)
chr6 (3-139)||(13613570-13613706)
chr6 (20-139)||(32518467-32518586)
chr6 (20-139)||(3480627-3480746)
chr6 (20-139)||(32454248-32454367)
chr6 (1-139)||(32439077-32439215)
chr6 (20-139)||(18645074-18645192)
chr6 (14-138)||(20523367-20523491)
chr6 (3-139)||(32516877-32517013)
chr6 (3-135)||(10568403-10568535)
chr6 (14-136)||(7372957-7373079)
chr6 (19-139)||(10569888-10570008)
chr6 (14-138)||(11355223-11355347)
chr6 (20-139)||(13610690-13610808)
chr6 (50-139)||(9400035-9400124)
chr6 (20-145)||(11357164-11357289)
chr6 (3-139)||(6899485-6899621)
chr6 (71-139)||(32437140-32437208)
chr6 (20-151)||(6902868-6902996)
chr6 (70-139)||(7371175-7371244)
chr6 (20-148)||(20525304-20525432)
chr6 (78-139)||(8605353-8605414)
chr6 (20-124)||(14338480-14338584)
chr6 (3-86)||(9398713-9398796)
chr6 (33-102)||(3018450-3018519)
chr6 (20-136)||(21068628-21068744)
chr6 (3-102)||(17952030-17952129)
chr6 (14-68)||(7049828-7049882)
chr6 (78-135)||(7049790-7049847)
chr6 (33-93)||(2968185-2968245)
chr6 (101-136)||(21091109-21091144)
chr6 (14-129)||(35175862-35175977)
chr6 (68-145)||(7051263-7051340)
[»] chr4 (50 HSPs)
chr4 (9-140)||(43519423-43519554)
chr4 (20-140)||(4173710-4173830)
chr4 (20-139)||(43507167-43507286)
chr4 (20-139)||(43508623-43508742)
chr4 (20-140)||(33265980-33266100)
chr4 (20-139)||(319273-319392)
chr4 (20-139)||(5437811-5437930)
chr4 (20-139)||(33264382-33264501)
chr4 (3-138)||(49523125-49523260)
chr4 (20-139)||(51013856-51013975)
chr4 (14-136)||(41761745-41761867)
chr4 (20-139)||(833223-833342)
chr4 (20-139)||(5439617-5439736)
chr4 (20-139)||(320870-320989)
chr4 (20-139)||(835012-835131)
chr4 (20-139)||(4169686-4169805)
chr4 (20-139)||(35401749-35401868)
chr4 (3-148)||(41781530-41781675)
chr4 (1-139)||(51011926-51012064)
chr4 (33-140)||(48813786-48813893)
chr4 (20-139)||(49524703-49524822)
chr4 (20-129)||(39345574-39345683)
chr4 (3-139)||(35404433-35404569)
chr4 (20-139)||(20493827-20493946)
chr4 (50-134)||(43521109-43521193)
chr4 (20-139)||(48645255-48645374)
chr4 (23-136)||(11601674-11601786)
chr4 (20-145)||(11254113-11254238)
chr4 (3-102)||(39083676-39083775)
chr4 (33-120)||(48646765-48646852)
chr4 (14-90)||(42980684-42980760)
chr4 (33-129)||(44558511-44558607)
chr4 (3-102)||(5484577-5484676)
chr4 (3-102)||(39921531-39921630)
chr4 (3-102)||(43779855-43779954)
chr4 (27-145)||(2691368-2691485)
chr4 (5-102)||(39189419-39189516)
chr4 (20-93)||(44794765-44794838)
chr4 (28-138)||(20819986-20820096)
chr4 (33-76)||(27624869-27624912)
chr4 (3-102)||(32652136-32652235)
chr4 (20-139)||(42982422-42982541)
chr4 (3-102)||(44994275-44994374)
chr4 (33-120)||(52868167-52868254)
chr4 (19-93)||(35996109-35996183)
chr4 (20-129)||(10372711-10372820)
chr4 (20-93)||(47941857-47941930)
chr4 (48-136)||(2693285-2693373)
chr4 (19-75)||(2827468-2827524)
chr4 (33-93)||(13450998-13451058)
[»] scaffold0058 (3 HSPs)
scaffold0058 (5-139)||(3294-3428)
scaffold0058 (5-139)||(4466-4600)
scaffold0058 (20-139)||(14313-14432)
[»] chr2 (39 HSPs)
chr2 (5-139)||(6785991-6786125)
chr2 (14-139)||(24208061-24208186)
chr2 (5-139)||(37020508-37020642)
chr2 (3-145)||(39664756-39664898)
chr2 (3-139)||(16763076-16763212)
chr2 (20-144)||(24205593-24205717)
chr2 (20-139)||(14387349-14387468)
chr2 (20-139)||(16764581-16764700)
chr2 (14-139)||(40560223-40560348)
chr2 (20-139)||(37022155-37022274)
chr2 (20-145)||(2577450-2577575)
chr2 (14-139)||(44709764-44709889)
chr2 (1-139)||(14389090-14389228)
chr2 (3-139)||(19908254-19908391)
chr2 (20-139)||(40561848-40561967)
chr2 (3-144)||(2766929-2767070)
chr2 (50-139)||(6783364-6783453)
chr2 (3-136)||(17696209-17696342)
chr2 (20-140)||(39663153-39663273)
chr2 (20-139)||(16376736-16376855)
chr2 (3-135)||(42519213-42519346)
chr2 (27-139)||(19581414-19581526)
chr2 (20-136)||(19906685-19906801)
chr2 (33-140)||(6797506-6797613)
chr2 (33-139)||(39455169-39455275)
chr2 (70-140)||(34400313-34400383)
chr2 (20-145)||(39456750-39456875)
chr2 (3-102)||(11023001-11023100)
chr2 (3-90)||(16377205-16377292)
chr2 (98-139)||(42517558-42517599)
chr2 (33-125)||(37417287-37417379)
chr2 (78-136)||(6799436-6799494)
chr2 (19-129)||(11315339-11315449)
chr2 (19-93)||(26584821-26584895)
chr2 (32-83)||(4046352-4046403)
chr2 (19-90)||(29909664-29909735)
chr2 (23-129)||(361455-361561)
chr2 (19-136)||(37645490-37645607)
chr2 (33-89)||(15432378-15432434)
[»] chr3 (62 HSPs)
chr3 (5-145)||(3152228-3152368)
chr3 (5-133)||(2660218-2660346)
chr3 (5-139)||(44794208-44794341)
chr3 (3-139)||(53190767-53190903)
chr3 (20-139)||(46308807-46308926)
chr3 (20-139)||(38193480-38193599)
chr3 (20-139)||(53094243-53094362)
chr3 (20-139)||(54900044-54900163)
chr3 (50-140)||(41979352-41979442)
chr3 (22-139)||(3150252-3150369)
chr3 (14-139)||(41977750-41977875)
chr3 (3-139)||(27899089-27899225)
chr3 (20-139)||(38191895-38192014)
chr3 (20-139)||(53187742-53187861)
chr3 (33-139)||(2226190-2226296)
chr3 (14-139)||(21348723-21348848)
chr3 (3-139)||(54898437-54898573)
chr3 (20-139)||(46310406-46310525)
chr3 (20-139)||(46611273-46611392)
chr3 (50-139)||(44795890-44795979)
chr3 (1-96)||(19987600-19987695)
chr3 (24-139)||(46609149-46609264)
chr3 (20-139)||(53092623-53092742)
chr3 (22-134)||(2661880-2661992)
chr3 (3-139)||(51684610-51684746)
chr3 (20-139)||(28626411-28626530)
chr3 (50-145)||(35903819-35903914)
chr3 (14-140)||(30599937-30600063)
chr3 (3-139)||(17515310-17515446)
chr3 (3-139)||(23293178-23293314)
chr3 (20-139)||(7883328-7883447)
chr3 (20-139)||(23291570-23291689)
chr3 (20-139)||(46112487-46112606)
chr3 (3-137)||(43765139-43765273)
chr3 (14-126)||(35905731-35905843)
chr3 (20-139)||(611192-611311)
chr3 (20-138)||(2378953-2379071)
chr3 (14-136)||(42279510-42279632)
chr3 (3-136)||(2377032-2377165)
chr3 (20-144)||(44267976-44268100)
chr3 (23-129)||(23774162-23774268)
chr3 (20-139)||(30598337-30598456)
chr3 (78-139)||(7884927-7884988)
chr3 (20-136)||(42282443-42282559)
chr3 (23-139)||(51686367-51686483)
chr3 (23-140)||(48829355-48829472)
chr3 (19-129)||(23888776-23888886)
chr3 (19-129)||(40508915-40509025)
chr3 (19-129)||(48633887-48633997)
chr3 (22-136)||(54412519-54412633)
chr3 (33-129)||(2977347-2977443)
chr3 (19-83)||(25535253-25535317)
chr3 (20-139)||(21350575-21350694)
chr3 (3-61)||(7884881-7884939)
chr3 (19-81)||(23876982-23877044)
chr3 (19-129)||(45898352-45898462)
chr3 (3-93)||(46197766-46197856)
chr3 (20-129)||(17516943-17517052)
chr3 (59-139)||(600725-600805)
chr3 (20-139)||(46114075-46114195)
chr3 (19-89)||(33113184-33113254)
chr3 (49-129)||(41944586-41944666)
[»] scaffold1712 (1 HSPs)
scaffold1712 (20-139)||(982-1101)
[»] scaffold0081 (1 HSPs)
scaffold0081 (20-139)||(54228-54347)
[»] scaffold1454 (1 HSPs)
scaffold1454 (3-136)||(1266-1399)
[»] scaffold0345 (1 HSPs)
scaffold0345 (20-145)||(1525-1650)
[»] scaffold0564 (1 HSPs)
scaffold0564 (48-137)||(8264-8353)
[»] scaffold0002 (1 HSPs)
scaffold0002 (68-132)||(436272-436336)


Alignment Details
Target: chr7 (Bit Score: 119; Significance: 1e-60; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 56468 - 56330
Alignment:
Q  1 ctactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgcc 100  Q
    |||||||| |||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  56468 ctactaacagacattttggacggagggagtgaattgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgcc 56369  T
Q  101 gatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||||||||||||||||||||||||||||||||||||    
T  56368 gatttttcaaaattcaaggacgaatttgaggtattagtc 56330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 20478176 - 20478042
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  20478176 taacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcaggtacgaaattggccgatt 20478077  T
Q  105 tttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||||||| | |||||||||||||||    
T  20478076 tttcaaaattcaaggactattttgaggtattagtc 20478042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 27666055 - 27666189
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    |||||| | |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  27666055 taacgggccttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatt 27666154  T
Q  105 tttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||||||||||||||||||||||||||||||||    
T  27666155 tttcaaaattcaaggacgaatttgaggtattagtc 27666189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 5 - 145
Target Start/End: Original strand, 29996504 - 29996644
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    |||||||| |||| || ||||||||  ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||  ||||||    
T  29996504 taacggaccttttggatggagggacgaatttgatggacgtctgtaaaattcagggattaatttgatatttcgcaaaattcagggacaaaattgaccgatt 29996603  T
Q  105 tttcaaaattcaaggacgaatttgaggtattagtccttttt 145  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  29996604 tttcaaaattcaaggacgaatttgaggtattagtcgttttt 29996644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 35402088 - 35401969
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  35402088 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgatttttcaaaattcaagg 35401989  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||| ||||||||    
T  35401988 acgaatttgagatattagtc 35401969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 35403589 - 35403708
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||    
T  35403589 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgattttttaaaattcaagg 35403688  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  35403689 acgaatttgaggtattagtc 35403708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 20479689 - 20479808
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||| | |   ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20479689 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaagg 20479788  T
Q  120 acgaatttgaggtattagtc 139  Q
    || | |||||||||||||||    
T  20479789 actattttgaggtattagtc 20479808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 39859217 - 39859353
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   ||||| |||||||||||||||||| ||||||| | ||||||||| ||||||||||||| || || |||||    
T  39859217 actaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaatttggccga 39859316  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| |||||||||||||||||||||||||||||||    
T  39859317 ttttttaaaattcaaggacgaatttgaggtattagtc 39859353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 77984 - 78104
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| | | | |   |||||||||||| |||||||||||| | ||||||||||||||||||| |||||||||||||||||||| |    
T  77984 acggagggactgatttgattggcattttgtaaattcagggacaaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaag 78083  T
Q  120 acgaatttgaggtattagtcc 140  Q
    |||||||||||||||||||||    
T  78084 acgaatttgaggtattagtcc 78104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 27664549 - 27664433
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||||||||||||||    
T  27664549 acggagggactgatttgattgacattttgtaaattcagggactaatttgatattttgcaaaattcagggacaaaattggccgatttttcaaaattcaagg 27664450  T
Q  120 acgaatttgaggtatta 136  Q
    || ||||||||||||||    
T  27664449 actaatttgaggtatta 27664433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 6602471 - 6602334
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||  |  || |||||    
T  6602471 actaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggataagtttagccga 6602372  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtcc 140  Q
    ||||| ||||||||||| |||||||||| |||||||||    
T  6602371 ttttttaaaattcaaggtcgaatttgagttattagtcc 6602334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 37115514 - 37115650
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| ||||||||||||  |||||||||||||||||||||||||| ||||| | ||||||| | |||||||||| ||||| ||  | ||    
T  37115514 actaacggagcttttggacggagggactattttgatggacgtctgtaaaattcaggtactaaatagatattttgcaaaattcaggaacgaatttgactga 37115613  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  37115614 ttttttaaaattcaatgacgaatttgaggtattagtc 37115650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 13169653 - 13169772
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||| | ||||||||| ||||||||||||| || || |||||||||| |||||||||||    
T  13169653 acggagggactgatttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttttgaaaattcaagg 13169752  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  13169753 acgaatttgaggtattagtc 13169772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 24228427 - 24228540
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggt 132  Q
    ||||||||||||||||||||||||| |||||| | ||||||||| |||||||||||||||| || ||| |||||| |||||||||| ||||| |||||||    
T  24228427 tttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcagggacgaatttggccaattttttaaaattcaagaacgaaattgaggt 24228526  T
Q  133 attagtccttttta 146  Q
    |||| || ||||||    
T  24228527 attaatcattttta 24228540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 34776903 - 34777036
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| |||||||||| | ||| || ||| |    
T  34776903 actaacggagtttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaatgaatttggccaa 34777002  T
Q  103 tttttcaaaattcaaggacgaatttgaggtatta 136  Q
    ||||| |||||| ||| |||||||||||||||||    
T  34777003 ttttttaaaatttaagaacgaatttgaggtatta 34777036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 47384413 - 47384294
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   |||||| |||||||||| ||||||||| |||||||| ||||||| || ||  ||||||||||||||||||    
T  47384413 acggagggactgatttgattgacattttgtaaattcggggactaattagatatttcgcaaaattcaaggacgaatttggctcatttttcaaaattcaagg 47384314  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  47384313 acgaatttgaggtattagtc 47384294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 37796185 - 37796302
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 118  Q
    ||||||||||||  ||||||||||||| |||||||||||||||||| | ||||||||| ||||||   ||||||| || || ||||||| ||||||||||    
T  37796185 gacggagggactattttgatggacgtccgtaaaattcagggactaaatagatatttcgcaaaatttgaggacgaatttggctgatttttgaaaattcaag 37796284  T
Q  119 gacgaatttgaggtatta 136  Q
    ||| ||||||||||||||    
T  37796285 gacaaatttgaggtatta 37796302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 38474131 - 38474267
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||| ||||   |||||| | ||||||||||||||| ||||||| | ||||||||| |||||||||||||||| ||  ||||    
T  38474131 actaacggagcttttggacggatggaccattttgataggcgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggacgaatttgaccga 38474230  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| ||||||| ||||| |||||||||||||||||    
T  38474231 tttttaaaaattcgaggactaatttgaggtattagtc 38474267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 39857764 - 39857648
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   |||||| |||||||| | ||||||||| |||||||||||||||| ||  ||||||||| |||||||||||    
T  39857764 acggagggactgatttgattgacattttgtaaattctgggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaagg 39857665  T
Q  120 acgaatttgaggtatta 136  Q
    |||||||||||||||||    
T  39857664 acgaatttgaggtatta 39857648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 30940413 - 30940550
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| ||||||| |||   ||||||| |||| ||||||||||||||||||| | ||||||||| |||||| || |||||| || |||||    
T  30940413 actaacggagcttttggacggagagaccattttgatgaacgtttgtaaaattcagggactaaatagatatttcgtaaaattaagagacgaatttggccga 30940512  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtcc 140  Q
    ||||| |||||||||| || ||||| ||||||||||||    
T  30940513 ttttttaaaattcaagaacaaatttaaggtattagtcc 30940550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 45359472 - 45359335
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| || ||||||||   |||||||||||||||||||||||| ||||||| | ||||||||| |||||||| ||||| | ||  ||||    
T  45359472 actaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcaaggacggatttgaccga 45359373  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtcc 140  Q
    ||||| |||||||| |||| ||||| ||||||||||||    
T  45359372 ttttttaaaattcatggacaaatttaaggtattagtcc 45359335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 37114060 - 37113936
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||| ||||||||| | ||||||||| |||||||||||| ||| ||  || |||||| |||||||||||    
T  37114060 acggagggactgatttgattgacattttgtaaatttagggactaaatagatatttcgcaaaattcagggatgaatttgaccaattttttaaaattcaagg 37113961  T
Q  120 acgaatttgaggtattagtcctttt 144  Q
    |||||||||||||||||||| ||||    
T  37113960 acgaatttgaggtattagtcttttt 37113936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 29994966 - 29994907
Alignment:
Q  79 aaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 138  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29994966 aaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagt 29994907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 24226700 - 24226582
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||| |||| || | | ||||||| |||||||| ||||||| || |||||||||| |||||||||||    
T  24226700 acggagggactgatttgattgacattttgtaaattcaaggacaaaatagctatttcgcaaaattcaaggacgaatttggccgatttttgaaaattcaagg 24226601  T
Q  120 acgaatttgaggtattagt 138  Q
    |||||||||||||||||||    
T  24226600 acgaatttgaggtattagt 24226582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 139
Target Start/End: Original strand, 47386227 - 47386333
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggt 132  Q
    |||||||||||||||||||||| || |||||| |  |||||||| |||||||| ||||||| ||  | ||||||| |||||| |||||||||||||||||    
T  47386227 tttgatggacgtctgtaaaatttagagactaaataaatatttcgcaaaattcaaggacgaatttgactgattttttaaaattaaaggacgaatttgaggt 47386326  T
Q  133 attagtc 139  Q
    |||||||    
T  47386327 attagtc 47386333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 23904700 - 23904582
Alignment:
Q  22 ggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggac 121  Q
    ||||||||||||||||| ||| | |   ||||||| ||||||| | | ||||| | ||||||||| |||||| ||  ||||||||| |||||||||||||    
T  23904700 ggagggactgatttgattgacattttgtaaattcatggactaaatagctattttgcaaaattcagagacgaatttgaccgattttttaaaattcaaggac 23904601  T
Q  122 gaatttgaggtattagtcc 140  Q
    |||||||||||||||||||    
T  23904600 gaatttgaggtattagtcc 23904582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 38549662 - 38549546
Alignment:
Q  24 agggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacga 123  Q
    ||||||||||||||||||| | |   ||||||  ||| ||| | ||||||||  |||||||||||||||| || || ||||||| |||||||||||||||    
T  38549662 agggactgatttgatggacattttgtaaattcgaggattaaatagatatttcacaaaattcagggacgaacttggctgatttttgaaaattcaaggacga 38549563  T
Q  124 atttgaggtattagtcc 140  Q
    |||| ||||||||||||    
T  38549562 atttaaggtattagtcc 38549546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 13168259 - 13168142
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattc---agggactaatttgatatttcgaaaaattcagggacgaaatttgc 99  Q
    |||||||||  |||| |||||| ||||   |||||||||||||||||||||||   ||||||||| | ||||||||| |||||||| ||||||| || ||    
T  13168259 actaacggagcttttggacggatggaccattttgatggacgtctgtaaaattcaggagggactaaatagatatttcgcaaaattcaaggacgaatttggc 13168160  T
Q  100 cgatttttcaaaattcaa 117  Q
    |||||||| |||||||||    
T  13168159 cgattttttaaaattcaa 13168142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 22155817 - 22155936
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   |||||||||||| || | | ||||| | |||||||| ||||||| || |||||||||| |||||||||||    
T  22155817 acggagggactgatttgattgacattttgtaaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaagg 22155916  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||| || |||||||||||    
T  22155917 acgaagtttaggtattagtc 22155936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 22211732 - 22211851
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   |||||||||||| || | | ||||| | |||||||| ||||||| || |||||||||| |||||||||||    
T  22211732 acggagggactgatttgattgacattttgtaaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaagg 22211831  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||| || |||||||||||    
T  22211832 acgaagtttaggtattagtc 22211851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 48227913 - 48228027
Alignment:
Q  22 ggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggac 121  Q
    ||||||||||||||||| ||| | |   |||||||||||| || | ||||||||| ||||||||  |||||| ||  ||||||||| ||||||||| |||    
T  48227913 ggagggactgatttgattgacattttgtaaattcagggacaaaatagatatttcgcaaaattcaaagacgaatttgaccgattttttaaaattcaaagac 48228012  T
Q  122 gaatttgaggtatta 136  Q
    |||||||||||||||    
T  48228013 gaatttgaggtatta 48228027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 6605397 - 6605483
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaattcaaggacgaatttgaggtatta 136  Q
    ||||||||||||||| | | ||||||| |||||||||| || ||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  6605397 aaattcagggactaaatagctatttcgcaaaattcaggaac-aaatttgaccgattttttaaaattcaaggacaaatttgaggtatta 6605483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 46437226 - 46437107
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||| | ||| | |   ||||||| |||| || | | ||||||| ||||||||  |||||| || || ||||||| |||||||||||    
T  46437226 acggagggactgatttggttgacattttgtaaattcaaggacaaaatagctatttcgcaaaattcaacgacgaatttggctgatttttgaaaattcaagg 46437127  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  46437126 acgaatttgaggtattagtc 46437107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 23906295 - 23906357
Alignment:
Q  78 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 140  Q
    |||||| ||||||||| || |||||||||| |||||||||||| |||||||||||||||||||    
T  23906295 aaaatttagggacgaatttggccgattttttaaaattcaaggaggaatttgaggtattagtcc 23906357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 33038801 - 33038911
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 118  Q
    |||||||||||   ||||||||||||||| |||||||||||||||| ||||||||||| | |||| ||||| ||| ||  ||||    | ||||||||||    
T  33038801 gacggagggacctttttgatggacgtctgaaaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccgacccataaaaattcaag 33038900  T
Q  119 gacgaatttga 129  Q
    |||||||||||    
T  33038901 gacgaatttga 33038911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 366818 - 366747
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 90  Q
    ||||||||||   ||||||| ||||||||| |||||||||||||||||||||||||| ||||| | ||||||    
T  366818 gacggagggatgaatttgatagacgtctgttaaattcagggactaatttgatatttcaaaaaactgagggac 366747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 7402000 - 7401949
Alignment:
Q  32 atttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt 83  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||| |||||    
T  7402000 atttgatggacgtctgttaaattcagggacgaatttgatatttcgataaatt 7401949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 35691542 - 35691431
Alignment:
Q  24 agggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacga 123  Q
    ||||||||||||||| ||| | |   ||||||| |||| || | | ||||||| |||||| || |||||| ||  ||||||||| |||||||||||||||    
T  35691542 agggactgatttgattgacattttgtaaattcaaggacaaaatagctatttcgcaaaatttagagacgaatttgaccgatttttgaaaattcaaggacga 35691443  T
Q  124 atttgaggtatt 135  Q
    ||||||||||||    
T  35691442 atttgaggtatt 35691431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 45463806 - 45463707
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||| |||| |||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  ||||| ||||||||| || |||||    
T  45463806 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccga 45463707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 46996706 - 46996816
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 118  Q
    |||||||||||   |||||||||||||||  |||||||| |||||| ||||||||||| | |||| ||||||||| || |||||    | |||||||| |    
T  46996706 gacggagggacctttttgatggacgtctgacaaattcagtgactaagttgatatttcgcataattgagggacgaagttggccgacgcgtgaaaattcagg 46996805  T
Q  119 gacgaatttga 129  Q
    |||||||||||    
T  46996806 gacgaatttga 46996816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 13039618 - 13039722
Alignment:
Q  26 ggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaat 125  Q
    ||||||||||||| ||| | |  |||||||||||||||| | | ||||||| |||||| ||||||||| ||    ||||||| ||||||||||||||||     
T  13039618 ggactgatttgattgacattttgaaaattcagggactaaatagttatttcgcaaaatttagggacgaatttgattgatttttgaaaattcaaggacgaac 13039717  T
Q  126 ttgag 130  Q
    |||||    
T  13039718 ttgag 13039722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 34775117 - 34774998
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||  | |   ||||||||||||||| | | ||||| | |||||||| | | ||| ||  ||||||||| ||||||||| |    
T  34775117 acggagggactgatttgattgatattttgtaaattcagggactaaatagctattttgcaaaattcatgaatgaatttgaccgattttttaaaattcaaag 34775018  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||| ||||||||    
T  34775017 acgaatttgagatattagtc 34774998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 35693388 - 35693450
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatt--tgatatttcgaaaaattcagggacgaa 93  Q
    ||||||||||||||||||||||||||||||||||   |||||| || |||||||| |||||||    
T  35693388 tttgatggacgtctgtaaaattcagggactaattagagatattccgcaaaattcaaggacgaa 35693450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 45361246 - 45361365
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   || |||| ||||||| |   ||||| | |||||||||| || |||||  || |||||| |||||||||||    
T  45361246 acggagggactgatttgattgacattttgtaagttcaaggactaaataactattttgcaaaattcaggaacaaaattgacccattttttaaaattcaagg 45361345  T
Q  120 acgaatttgaggtattagtc 139  Q
    | ||||||||||||||||||    
T  45361346 aagaatttgaggtattagtc 45361365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 27955490 - 27955380
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 118  Q
    |||||||||||   |||||||||||||||  ||||||||  | ||| ||||||||||| |||||| ||||| ||| || || |||   | ||||||||||    
T  27955490 gacggagggacctctttgatggacgtctgacaaattcagaaattaagttgatatttcgtaaaattgagggatgaatttagctgatccgtaaaaattcaag 27955391  T
Q  119 gacgaatttga 129  Q
    |||||||||||    
T  27955390 gacgaatttga 27955380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 129
Target Start/End: Original strand, 38613503 - 38613595
Alignment:
Q  37 atggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 129  Q
    |||||||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||| || |||||    | |||||| ||||||||||||||    
T  38613503 atggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattgaaggacgaatttga 38613595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 47341712 - 47341800
Alignment:
Q  41 acgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 129  Q
    |||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||| || |||||    | |||||||||||||||||||||    
T  47341712 acgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattcaaggacgaatttga 47341800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 139
Target Start/End: Original strand, 35693434 - 35693465
Alignment:
Q  108 caaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||||||||||||||    
T  35693434 caaaattcaaggacgaatttgaggtattagtc 35693465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 2167599 - 2167529
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcaggga 89  Q
    |||||||||||   |||||||| ||||||  ||||||||||||||| ||||||||||| | |||| |||||    
T  2167599 gacggagggacctttttgatgggcgtctgacaaattcagggactaagttgatatttcgcataattgaggga 2167529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 23953925 - 23953815
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 118  Q
    |||||||||||   |||||| ||||||||  ||||||| ||||||| ||||||||||| | |||| | ||||||| ||| ||||    | |||||| |||    
T  23953925 gacggagggacctttttgattgacgtctgacaaattcacggactaagttgatatttcgcataattgatggacgaattttaccgacccgtaaaaatttaag 23953826  T
Q  119 gacgaatttga 129  Q
    |||||||||||    
T  23953825 gacgaatttga 23953815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 4322560 - 4322633
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcg 76  Q
    |||||||||| |||| |||||||||||  | |||||||| |||    |||||||||||||| ||||||||||||    
T  4322560 actaacggaccttttggacggagggacgaaattgatggatgtcaaacaaattcagggactattttgatatttcg 4322633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 11682901 - 11682828
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacga 92  Q
    |||||||||||| | |||||||||||||    |||||| ||||||||||||||||| | | |||| ||||||||    
T  11682901 gacggagggactaaattgatggacgtctaacgaattcaaggactaatttgatattttgcataattgagggacga 11682828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 136
Target Start/End: Complemental strand, 13018085 - 13018036
Alignment:
Q  87 ggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 136  Q
    ||||||| || || ||||||| |||||||||||| |||||||||||||||    
T  13018085 ggacgaatttggctgattttttaaaattcaaggatgaatttgaggtatta 13018036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 35344295 - 35344368
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 93  Q
    ||||||||||   ||||||||||||||   ||||||||||| ||| ||||||||||| | |||| |||||||||    
T  35344295 acggagggacctttttgatggacgtcttataaattcagggattaaattgatatttcgcataattgagggacgaa 35344368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 129
Target Start/End: Original strand, 46812600 - 46812696
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 129  Q
    |||||||||||||||  ||||| ||||||||| ||||||||||    |||| ||||| ||| || ||||| |  | |||||||||||||||| ||||    
T  46812600 tttgatggacgtctgacaaatttagggactaaattgatatttcacgtaattgagggatgaatttggccgactcgtaaaaattcaaggacgaagttga 46812696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 2e-59; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 27691286 - 27691150
Alignment:
Q  7 acggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttt 106  Q
    |||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  27691286 acggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttt 27691187  T
Q  107 tcaaaattcaaggacgaatttgaggtattagtccttt 143  Q
    |||||||||||||||||||||||||||||||||||||    
T  27691186 tcaaaattcaaggacgaatttgaggtattagtccttt 27691150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 27406907 - 27407044
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||| |||||||||| ||| |||    
T  27406907 taacggacattttggacggagagactgatttgatggacgtctgtaaaattcagggactattttaatatttcgaataattcatggacgaaattggccaatt 27407006  T
Q  105 tttcaaaattcaaggacgaatttgaggtattagtcctt 142  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  27407007 tttcaaaattcaaggactattttgaggtattagtcctt 27407044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 146
Target Start/End: Original strand, 33708814 - 33708954
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    |||||||| |||| ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||  ||| ||    
T  33708814 taacggaccttttggacggagggacagatttgatggacgtttgtaaaattcagggactaatttaatatttcgcaaaattcagggacgaaattgaccg-tt 33708912  T
Q  105 tttcaaaattcaaggacgaatttgaggtattagtccttttta 146  Q
    ||| |||||||||||| |||||||||||||||||||| ||||    
T  33708913 ttttaaaattcaaggatgaatttgaggtattagtcctattta 33708954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 601674 - 601793
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||| | |   ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  601674 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaagg 601773  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  601774 acgaatttgaggtattagtc 601793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 13108355 - 13108480
Alignment:
Q  14 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 113  Q
    |||| |||||||||||   |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | || |||||||||| |||||    
T  13108355 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttagccgattttttaaaat 13108454  T
Q  114 tcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||||||| ||||||||    
T  13108455 tcaaggacgaatttgagttattagtc 13108480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 8609795 - 8609931
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||| || |||||    
T  8609795 actaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccga 8609894  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  8609895 ttttttaaaattcaagaacgaatttgaggtattagtc 8609931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 13282614 - 13282478
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   |||||||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||| || |||||    
T  13282614 actaacggagcttttggacggagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccga 13282515  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| |||||||||||||||||||||||||||||||    
T  13282514 ttttttaaaattcaaggacgaatttgaggtattagtc 13282478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 15305931 - 15305815
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||  || |||    
T  15305931 taacggatattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggacaaaattgaccaatt 15305832  T
Q  105 tttcaaaattcaaggac 121  Q
    |||||||||||||||||    
T  15305831 tttcaaaattcaaggac 15305815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 15486300 - 15486184
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||  || |||    
T  15486300 taacggatattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggacaaaattgaccaatt 15486201  T
Q  105 tttcaaaattcaaggac 121  Q
    |||||||||||||||||    
T  15486200 tttcaaaattcaaggac 15486184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 33762683 - 33762807
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||| ||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  33762683 acggagggattgatttgattgacattttgtaaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaagg 33762782  T
Q  120 acgaatttgaggtattagtcctttt 144  Q
    |||||||||||||||||||| ||||    
T  33762783 acgaatttgaggtattagtcatttt 33762807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 139
Target Start/End: Complemental strand, 29237240 - 29237151
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  29237240 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 29237151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 139
Target Start/End: Original strand, 29239187 - 29239276
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29239187 aaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 29239276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 8608357 - 8608229
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt-cagggacgaaatttgccgatttttcaaaattcaag 118  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||||||||    
T  8608357 acggagggactgatttgattgacattttataaattcagggactaatttgatatttcgcaaaatttcagggacgaaattgaccgatttttcaaaattcaag 8608258  T
Q  119 gacgaatttgaggtattagtcctttttat 147  Q
    ||||||||| |||||||||||||||||||    
T  8608257 gacgaatttaaggtattagtcctttttat 8608229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 38547364 - 38547228
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| || ||||||||   |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| | || |||||    
T  38547364 actaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcatggacgtatttggccga 38547265  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  38547264 ttttttaaaattcaaggacgaacttgaggtattagtc 38547228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 27692807 - 27692926
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    |||||||||||||||| || ||| | |   ||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||    
T  27692807 acggagggactgatttaattgacattttgtaaattcagggactaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 27692906  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  27692907 acgaatttgaggtattagtc 27692926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 33761188 - 33761069
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||| |    
T  33761188 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggctgatttttcaaaattcaaag 33761089  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  33761088 acgaatttgaggtattagtc 33761069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 38548801 - 38548920
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||  | |   ||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  38548801 acggagggactgatttgattgaaattttgtaaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 38548900  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  38548901 acgaatttgaggtattagtc 38548920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 33707325 - 33707207
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    |||||| |||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  33707325 acggagtgactgatttgattgacattttataaattcagggactaatttgatatttcgtaaaattcagggacgaaattgaccgatttttcaaaattcaagg 33707226  T
Q  120 acgaatttgaggtattagt 138  Q
    |||||||||||||||||||    
T  33707225 acgaatttgaggtattagt 33707207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 42941910 - 42941777
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    ||||||||| ||||| ||||||||||||  |||||||||| ||||||||||||||||||||| |  |||||||  |||||||||||||||| || || ||    
T  42941910 actaacggagattttggacggagggactattttgatggacatctgtaaaattcagggactaaataaatatttctcaaaattcagggacgaatttggctga 42941811  T
Q  103 tttttcaaaattcaaggacgaatttgaggtatta 136  Q
    ||||| ||||||||||||||||||||||||||||    
T  42941810 ttttttaaaattcaaggacgaatttgaggtatta 42941777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 35509333 - 35509214
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||| ||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  35509333 acggatggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaagg 35509234  T
Q  120 acgaatttgaggtattagtc 139  Q
    || |||||||||||||||||    
T  35509233 actaatttgaggtattagtc 35509214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 35510789 - 35510908
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||  |||||||| ||||||||||  |||||||||||||||||||||    
T  35510789 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcacaaaattcaaggacgaaattgaccgatttttcaaaattcaagg 35510888  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  35510889 acgaatttgaggtattagtc 35510908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 50 - 139
Target Start/End: Complemental strand, 13106893 - 13106804
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||    
T  13106893 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttaaggtattagtc 13106804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 50 - 139
Target Start/End: Original strand, 15308261 - 15308350
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  15308261 aaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 15308350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 50 - 139
Target Start/End: Original strand, 15488630 - 15488719
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  15488630 aaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 15488719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 13283965 - 13284081
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||| ||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||    
T  13283965 acggagggactgatttgattgacattttgtaaattcatggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaagg 13284064  T
Q  120 acgaatttgaggtatta 136  Q
    ||||||||| |||||||    
T  13284065 acgaatttgtggtatta 13284081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 42943396 - 42943515
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||| | ||||||||| |||||||||||||||| || |||||||||| |||||||||||    
T  42943396 acggagggactgatttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagg 42943495  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  42943496 acgaatttgaggtattagtc 42943515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 26242322 - 26242455
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   ||||||||||||||||||||||||| |||||| | ||||||||| |||||| ||||||||| || || ||    
T  26242322 actaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaatttagggacgaatttggctga 26242421  T
Q  103 tttttcaaaattcaaggacgaatttgaggtatta 136  Q
    ||||| |||||||||| ||||| |||||||||||    
T  26242422 tttttgaaaattcaagaacgaaattgaggtatta 26242455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 41042592 - 41042728
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   ||||||||||| |||||||||||||||||||| | ||||||||  ||||||||||||| || || ||| |    
T  41042592 actaacggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaatagatatttcacaaaattcagggacaaatttggccaa 41042691  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| |||||||||||||| |||| |||||||||||    
T  41042692 ttttttaaaattcaaggacggatttaaggtattagtc 41042728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 26238845 - 26238726
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||||||| | |   ||||||  ||||||| | ||||||||| |||||||||||||||| || || ||||||| |||||||||||    
T  26238845 acggagggactgatttgatggacattttgtaaattcgaggactaaatagatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaagg 26238746  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  26238745 acgaatttgaggtattagtc 26238726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 33 - 136
Target Start/End: Original strand, 41825682 - 41825785
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggt 132  Q
    |||||||||||||||||||||||||||||||| | ||||||||| |||||||| ||||||| ||    ||||||| ||||||||||||||||||||||||    
T  41825682 tttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttatttgatttttgaaaattcaaggacgaatttgaggt 41825781  T
Q  133 atta 136  Q
    ||||    
T  41825782 atta 41825785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 27404299 - 27404213
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 136  Q
    ||||| |||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||    
T  27404299 aaatttagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtatta 27404213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 18645813 - 18645752
Alignment:
Q  140 ctttttataatagcaaatgtgctttaaactcctttagtatcgcttagatcatcaaccgaact 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18645813 ctttttataatagcaaatgtgctttaaactcctttagtatcgcttagatcatcaaccgaact 18645752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 22272472 - 22272332
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| || |||||||||  |||||||||||| ||||||||||||||||||| | |||||| || |||||||||||||||| ||  | ||    
T  22272472 actaacggagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcagggacgaatttgactga 22272373  T
Q  103 --tttttcaaaattcaaggacgaatttgaggtattagtcct 141  Q
      ||||| ||||||||| |||||||||||||||||||||||    
T  22272372 ttttttttaaaattcaaagacgaatttgaggtattagtcct 22272332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 33 - 139
Target Start/End: Original strand, 13486137 - 13486243
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggt 132  Q
    |||||||||||||||||||||||||||||||| | ||||||||| ||||| ||| ||||||  |  ||||||||| |||||||||| || ||||||||||    
T  13486137 tttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatccagagacgaatctgaccgatttttaaaaattcaagcacaaatttgaggt 13486236  T
Q  133 attagtc 139  Q
    |||||||    
T  13486237 attagtc 13486243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 58 - 140
Target Start/End: Original strand, 34681074 - 34681156
Alignment:
Q  58 ggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 140  Q
    ||||||| | ||||||||| |||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||    
T  34681074 ggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtcc 34681156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 33 - 138
Target Start/End: Complemental strand, 5036551 - 5036446
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggt 132  Q
    |||||| ||||||||||||||||| ||||||| | ||||||||  |||||||||||||||| ||  | ||||||| |||||| |||||||||||||||||    
T  5036551 tttgatagacgtctgtaaaattcaaggactaaatagatatttcacaaaattcagggacgaatttgacggattttttaaaatttaaggacgaatttgaggt 5036452  T
Q  133 attagt 138  Q
    ||||||    
T  5036451 attagt 5036446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 7745120 - 7745256
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| || ||||||||   ||||||||| ||||||||||| |||||||||| |  |||||||| ||||||||| |||||| || || ||    
T  7745120 actaacggagcttttggatggagggaccattttgatggatgtctgtaaaatacagggactaaataaatatttcgcaaaattcagagacgaatttggctga 7745219  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| ||||||||| |||||||||||| ||||||||    
T  7745220 tttttgaaaattcaaagacgaatttgagatattagtc 7745256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 22273861 - 22273980
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||| | ||||||| | ||||||||| ||| || || |||||||||| |||||||||||    
T  22273861 acggagggactgatttgattgacattttgtaaattcagggactaaatagatattttgcaaaattcagagacaaatttggccgattttttaaaattcaagg 22273960  T
Q  120 acgaatttgaggtattagtc 139  Q
    || |||||||||||||||||    
T  22273961 acaaatttgaggtattagtc 22273980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 41824009 - 41823890
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    |||||||||||||||||||| || | |   ||||||  ||||||| | ||||||||| |||||||| |||||||||| || ||||||| |||||||||||    
T  41824009 acggagggactgatttgatgaacattttgtaaattcgaggactaaatagatatttcgcaaaattcaaggacgaaattagctgatttttgaaaattcaagg 41823910  T
Q  120 acgaatttgaggtattagtc 139  Q
    |||||||| |||||||||||    
T  41823909 acgaatttaaggtattagtc 41823890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 600819 - 600759
Alignment:
Q  80 aattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 140  Q
    |||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  600819 aattcaaggacgaaattggctgatttttcaaaattcaaggacgaatttgaggtattagtcc 600759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 9673184 - 9673296
Alignment:
Q  14 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 113  Q
    ||||||||||||||||   |||||||||||||||||||||||||||| ||| | ||||||||  |||||||||||||||| || ||  |||  | || ||    
T  9673184 ttttagacggagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacgaatttagctaattgatgaagat 9673283  T
Q  114 tcaaggacgaatt 126  Q
    |||||||||||||    
T  9673284 tcaaggacgaatt 9673296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 5038032 - 5038150
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||| | | ||||||| |||||||| | ||||| ||  ||||||||| ||||||||| |    
T  5038032 acggagggactgatttgattgacattttgtaaattcagggactaaatagctatttcgcaaaattcaagaacgaatttgaccgattttttaaaattcaa-g 5038130  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  5038131 acgaatttgaggtattagtc 5038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 13484613 - 13484545
Alignment:
Q  71 atttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||| |||||||||||||||| || |||||||||| ||||||||| ||||||||||||| |||||||    
T  13484613 atttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatgacgaatttgaggcattagtc 13484545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 43262107 - 43262226
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    |||||| |||||||||||| ||| | |   ||||||  ||||||| | ||||||||| |||||| |||| |||| || || ||||||| |||||| ||||    
T  43262107 acggagagactgatttgattgacattttgtaaattcgaggactaaatagatatttcgcaaaatttagggtcgaatttagctgatttttgaaaatttaagg 43262206  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  43262207 acgaatttgaggtattagtc 43262226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 28433704 - 28433830
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    ||||||| || |||| |||||||||||  | | ||||||||||    |||||||||||||| ||||||||||||  ||||| ||||||||| || |||||    
T  28433704 actaacgaaccttttggacggagggacgaaatcgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgagggacgaatttggccga 28433803  T
Q  103 tttttcaaaattcaaggacgaatttga 129  Q
    |  || |||||||| ||||||| ||||    
T  28433804 tccttgaaaattcagggacgaaattga 28433830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 31821538 - 31821428
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 118  Q
    |||||||||||   |||||||||||||||  |||||| |||||||| ||||||||||| | |||| ||||||||| ||  ||||  | | |||||||| |    
T  31821538 gacggagggacctttttgatggacgtctgataaattctgggactaagttgatatttcgcataattgagggacgaagttgaccgacgtgtgaaaattcagg 31821439  T
Q  119 gacgaatttga 129  Q
    |||||||||||    
T  31821438 gacgaatttga 31821428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 41040839 - 41040720
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    |||||||||| |||||||| ||| | |   ||||||| |||| || | | ||||| | |||||||||  ||||| || |||||||||| ||||||||| |    
T  41040839 acggagggaccgatttgattgacattttgtaaattcaaggacaaaatagctattttggaaaattcagaaacgaatttagccgatttttaaaaattcaaag 41040740  T
Q  120 acgaatttgaggtattagtc 139  Q
    || |||||||||||||||||    
T  41040739 acaaatttgaggtattagtc 41040720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 11788441 - 11788367
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 93  Q
    ||||||||||   ||||||||||||||||| ||||||  |||| ||||||||||||||| |||||  ||||||||    
T  11788441 gacggagggatgaatttgatggacgtctgttaaattcgaggacaaatttgatatttcgataaattaggggacgaa 11788367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 40020623 - 40020713
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 93  Q
    |||||||||| |||| |||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  |||||  ||||||||    
T  40020623 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaa 40020713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 42897778 - 42897888
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 118  Q
    |||||||||||   |||||||||||||||  ||||||| ||||||| ||||||||||  | |||| ||||||||| || |||||    | ||||||||||    
T  42897778 gacggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttcacataattgagggacgaatttggccgacccgtaaaaattcaag 42897877  T
Q  119 gacgaatttga 129  Q
    |||| ||||||    
T  42897878 gacggatttga 42897888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 37526027 - 37526084
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcg 76  Q
    |||||||||||   ||||||||| ||||| |||||||||||||||| |||||||||||    
T  37526027 gacggagggacctttttgatggatgtctgaaaaattcagggactaagttgatatttcg 37526084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 129
Target Start/End: Original strand, 462388 - 462484
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 129  Q
    |||||||||||| ||  ||||||| ||||||| ||||||||||| | |||| | ||| ||| || |||||| | | ||||||||| |||||||||||    
T  462388 tttgatggacgtttgacaaattcaaggactaagttgatatttcgcataattgacggatgaatttggccgatctgtaaaaattcaatgacgaatttga 462484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 129
Target Start/End: Complemental strand, 32822467 - 32822371
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 129  Q
    |||||||||| ||||  ||||||||||||||| |||||||||  || |||| ||||| ||| || ||||||   | |||||||||||||||| ||||    
T  32822467 tttgatggacatctgacaaattcagggactaagttgatattttaaataattgagggatgaatttggccgatccataaaaattcaaggacgaagttga 32822371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 129
Target Start/End: Original strand, 33160166 - 33160262
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 129  Q
    |||||||| ||||||  |||||||| |||||| ||||||||||  | |||| ||||| ||| || |||||  | | |||||||||||||||||||||    
T  33160166 tttgatgggcgtctgacaaattcagagactaagttgatatttcacataattgagggatgaatttggccgacctgtgaaaattcaaggacgaatttga 33160262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 33750388 - 33750472
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgat 103  Q
    |||||||||||   ||||||| | |||||  ||||||||||||||| ||||||||||| | |||| ||||||||| || ||||||    
T  33750388 gacggagggacctttttgatgaatgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccgat 33750472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 31201148 - 31201230
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    ||||||||||   |||||||||||||||  ||||||||||| ||| ||||||||||| | |||| | ||||||| || |||||    
T  31201148 acggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgatggacgaatttggccga 31201230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 9184503 - 9184446
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcg 76  Q
    |||||||||||   || ||| ||||||||  |||||||||||||||||||||||||||    
T  9184503 gacggagggaccatttcgatcgacgtctgacaaattcagggactaatttgatatttcg 9184446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 7e-56; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 29621771 - 29621905
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29621771 taacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatt 29621870  T
Q  105 tttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||| ||| | |||||||||||||||    
T  29621871 tttcaaaattcaatgactattttgaggtattagtc 29621905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 42473597 - 42473735
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||    
T  42473597 taacggacattttggacggaaggactgatttgatggacgtctgtaaaattcagggactattttgatatttcgaataattcagggacgaaattggccgatt 42473696  T
Q  105 tttcaaaattcaaggacgaatttgaggtattagtccttt 143  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  42473697 tttcaaaattcaaggactattttgaggtattagtccttt 42473735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 40780684 - 40780553
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    ||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  40780684 taacggacattttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatt 40780585  T
Q  105 tttcaaaattcaaggacgaatttgaggtatta 136  Q
    ||||||||||||||||| | ||||||||||||    
T  40780584 tttcaaaattcaaggactattttgaggtatta 40780553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 32 - 139
Target Start/End: Original strand, 24541229 - 24541336
Alignment:
Q  32 atttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgagg 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  24541229 atttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacgaatttgagg 24541328  T
Q  132 tattagtc 139  Q
    ||||||||    
T  24541329 tattagtc 24541336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 2854321 - 2854450
Alignment:
Q  9 ggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttc 108  Q
    |||| |||| |||||||||||  ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||    
T  2854321 ggaccttttggacggagggacgaatttgttggacgtctgtaaaattcagggactaatttgat-tttcgaaaaattcagggacgaaattgaccgatttttc 2854419  T
Q  109 aaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||||||||||||||||||||||||||||    
T  2854420 aaaattcaaggacgaatttgaggtattagtc 2854450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 17574454 - 17574318
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||| || |||||    
T  17574454 actaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccga 17574355  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| |||||||||||||||||||||||||||||||    
T  17574354 ttttttaaaattcaaggacgaatttgaggtattagtc 17574318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 36057603 - 36057738
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    |||||||  |||| |||||||||||   ||||||||||||||||||||||||||| |||| | ||||||||| |||||||||||||||| || |||||||    
T  36057603 taacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggtctaaatagatatttcgcaaaattcagggacgaatttggccgatt 36057702  T
Q  105 tttcaaaattcaaggacgaatttgaggtattagtcc 140  Q
    ||| ||||||||||||||||||||||||||||||||    
T  36057703 tttgaaaattcaaggacgaatttgaggtattagtcc 36057738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 40782181 - 40782300
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||| | |   ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40782181 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaagg 40782280  T
Q  120 acgaatttgaggtattagtc 139  Q
    || | |||||||||||||||    
T  40782281 actattttgaggtattagtc 40782300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 7267979 - 7267841
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| ||||||||||    |||||||||||||||||||||||||||||||| | ||||||||| ||||||||| |||||| || | |||    
T  7267979 actaacggagcttttggacggagggatcattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagtgacgaatttggacga 7267880  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtcct 141  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  7267879 ttttttaaaattcaaggacgaatttgaggtattagtcct 7267841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 2853005 - 2852886
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||| ||||||||||||||||| |||||||||||||||||||  ||||||||| |||||||||||    
T  2853005 acggagggactgatttgattgacattttgtaaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgattttttaaaattcaagg 2852906  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  2852905 acgaatttgaggtattagtc 2852886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 50 - 145
Target Start/End: Original strand, 7269446 - 7269541
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 145  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  7269446 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgattttttaaaattcaaagacgaatttgaggtattagtcattttt 7269541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 21842962 - 21843081
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||| |||| |||||  |||||||||||||||||||||    
T  21842962 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcatggacaaaattgaccgatttttcaaaattcaagg 21843061  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  21843062 acgaatttgaggtattagtc 21843081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 29620257 - 29620138
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||| | |   |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29620257 acggagggactaatttgattgacattttgtaaattcagagactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaagg 29620158  T
Q  120 acgaatttgaggtattagtc 139  Q
    || | |||||||||||||||    
T  29620157 actattttgaggtattagtc 29620138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 33 - 139
Target Start/End: Complemental strand, 34327741 - 34327635
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggt 132  Q
    |||||||||||||||||||||||||||||||| | ||||||||| ||||||||| |||||| || ||| |||||  ||||||||||||||||||||||||    
T  34327741 tttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagcgacgaatttggccaattttagaaaattcaaggacgaatttgaggt 34327642  T
Q  133 attagtc 139  Q
    |||||||    
T  34327641 attagtc 34327635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 12738706 - 12738825
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||| | ||||||||| |||||||||| ||||| || |||||||||| |||||||||||    
T  12738706 acggagggactgatttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaagg 12738805  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  12738806 acgaatttgaggtattagtc 12738825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 12801529 - 12801648
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||| | ||||||||| |||||||||| ||||| || |||||||||| |||||||||||    
T  12801529 acggagggactgatttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaagg 12801628  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  12801629 acgaatttgaggtattagtc 12801648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 142
Target Start/End: Original strand, 8541241 - 8541363
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||| ||||||| | ||||||||| |||||||||||||||| || |||||||||| ||||||||| |    
T  8541241 acggagggactgatttgattgacattttgtaaattcaaggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaatg 8541340  T
Q  120 acgaatttgaggtattagtcctt 142  Q
    |||||||||||||||||||||||    
T  8541341 acgaatttgaggtattagtcctt 8541363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 2179912 - 2179787
Alignment:
Q  14 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 113  Q
    |||| |||||||||||   ||||||||| |||||||||||||||||| ||| | ||||||||  |||||||||||||||| ||  ||||||||| |||||    
T  2179912 ttttggacggagggaccattttgatggatgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacgaatttgaccgattttttaaaat 2179813  T
Q  114 tcaaggacgaatttgaggtattagtc 139  Q
    |||||||| |||||||||||||||||    
T  2179812 tcaaggacaaatttgaggtattagtc 2179787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 17577905 - 17578022
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||| | ||||||||||||||| | |||||||||||| |||||  ||||||||||||||||||||||    
T  17577905 acggagggactgatttgattgacattttgtaaattcatgaactaatttgatattttgcaaaattcagggaagaaatgggccgatttttcaaaattcaagg 17578004  T
Q  120 acgaatttgaggtattag 137  Q
    ||||||||||||||||||    
T  17578005 acgaatttgaggtattag 17578022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 8539811 - 8539675
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| || |||| ||||  |||||||||||| ||||||||||||||||||| | ||||||||| |||||||| | ||||| ||    ||    
T  8539811 actaacggagcttttggatggagcgactattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcaagaacgaatttgattga 8539712  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||||||||||||||||||||||||||||||||||    
T  8539711 tttttcaaaattcaaggacgaatttgaggtattagtc 8539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 50 - 139
Target Start/End: Complemental strand, 30463989 - 30463900
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||||| | ||||||||| |||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||    
T  30463989 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 30463900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 30468268 - 30468405
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   |||||||||||||||||||||||| ||||||| | ||||||||| |||||| || |||||| ||  || |    
T  30468268 actaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattgagagacgaatttgaccaa 30468367  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtcc 140  Q
    ||||| |||||||||||||||| ||||||||| |||||    
T  30468368 ttttttaaaattcaaggacgaaattgaggtatcagtcc 30468405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 50 - 139
Target Start/End: Complemental strand, 42471637 - 42471548
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||| | |||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  42471637 aaattcatgtactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 42471548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 18624994 - 18625129
Alignment:
Q  1 ctactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgcc 100  Q
    |||||||||||  |||| |||||| ||||   |||||||||||  ||||||||||||||||||| | ||||||||  |||||||||||||||| || ||     
T  18624994 ctactaacggagcttttggacggaaggaccattttgatggacgagtgtaaaattcagggactaaatagatatttcacaaaattcagggacgaatttagct 18625093  T
Q  101 gatttttcaaaattcaaggacgaatttgaggtatta 136  Q
    |||   | ||||||||||||||||||||||||||||    
T  18625094 gatcagtgaaaattcaaggacgaatttgaggtatta 18625129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 28813735 - 28813856
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga--tttttcaaaattcaa 117  Q
    |||||||||||||||||||  || | |   ||||||||||||||| | ||||||||| |||||||| ||||||| || ||| |  |||||  ||||||||    
T  28813735 acggagggactgatttgatttacattttgtaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccaatttttttttaaattcaa 28813834  T
Q  118 ggacgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||||    
T  28813835 ggacgaatttgaggtattagtc 28813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 28822060 - 28822176
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||| |||| || | |  |||||| |||||||||||||||| ||  || |||||| |||||||||||    
T  28822060 acggagggactgatttgattgacattttgtaaattcaaggacaaaatagcaatttcgcaaaattcagggacgaatttgacctatttttaaaaattcaagg 28822159  T
Q  120 acgaatttgaggtatta 136  Q
    |||||||||||||||||    
T  28822160 acgaatttgaggtatta 28822176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 34328797 - 34328916
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    |||||| |||||||||||| ||| | |   ||||||| |||| || | | ||||| | |||||||| ||||||| ||  ||||||||| |||||||||||    
T  34328797 acggagcgactgatttgattgacattttgtaaattcaaggacaaaatagctattttgcaaaattcatggacgaatttgaccgatttttgaaaattcaagg 34328896  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  34328897 acgaatttgaggtattagtc 34328916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 18728606 - 18728716
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 118  Q
    |||||||||||   |||||||||||||||  ||||||||||||||| ||||||||||| | |||| ||||||||| || |||||    | |||||||| |    
T  18728606 gacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattaagggacgaagttggccgacaagtgaaaattcagg 18728705  T
Q  119 gacgaatttga 129  Q
    |||||||||||    
T  18728706 gacgaatttga 18728716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 43492131 - 43492212
Alignment:
Q  48 taaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 129  Q
    ||||||||||||||||| | ||||||||| |||||||||||| ||| || || ||||||| |||||| ||| ||||||||||    
T  43492131 taaaattcagggactaaatagatatttcgcaaaattcagggatgaacttggctgatttttgaaaatttaagtacgaatttga 43492212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 129
Target Start/End: Complemental strand, 38596974 - 38596878
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 129  Q
    ||||||||||||||   ||||||||||||||| ||||||||||| | |||| ||||||||| || |||||    | |||||||||||||||||||||    
T  38596974 tttgatggacgtctaacaaattcagggactaagttgatatttcgcataattgagggacgaatttggccgacccataaaaattcaaggacgaatttga 38596878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 27075927 - 27075876
Alignment:
Q  32 atttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt 83  Q
    ||||||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  27075927 atttgatggacgtctgttaaattcaggaactaatttgatattttgaaaaatt 27075876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 32087634 - 32087560
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 93  Q
    |||||||||||   ||||||||||||||| |||||| ||||||||| ||||||||||| | |||| |||||||||    
T  32087634 gacggagggacctttttgatggacgtctgaaaaattaagggactaagttgatatttcgcataattaagggacgaa 32087560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 35395453 - 35395343
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 118  Q
    |||||||||||   ||||||||||||||   ||||||||| ||||| ||||||||||| | |||| ||||||||| || |||||  | | |||||||| |    
T  35395453 gacggagggacctttttgatggacgtctaacaaattcaggaactaaattgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagg 35395354  T
Q  119 gacgaatttga 129  Q
    || ||||||||    
T  35395353 gatgaatttga 35395343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 43318064 - 43318174
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 118  Q
    |||||||||||   ||| |||||||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||  || |||||    | ||||||||||    
T  43318064 gacggagggaccttttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccataaaaattcaag 43318163  T
Q  119 gacgaatttga 129  Q
    |||||||||||    
T  43318164 gacgaatttga 43318174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 139
Target Start/End: Complemental strand, 32134320 - 32134231
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||||| | |||||||   ||||||||  |||||| || |  ||||||| ||||||||| ||| |||||||||||||||||    
T  32134320 aaattcagggactaaatagatattttacaaaattcaaagacgaatttggttgatttttgaaaattcaatgacaaatttgaggtattagtc 32134231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 136
Target Start/End: Complemental strand, 41493931 - 41493847
Alignment:
Q  52 attcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 136  Q
    ||||| ||||||| | ||||||||  ||||||   ||||||| || || ||||||| |||||||||||||||| |||||||||||    
T  41493931 attcatggactaaatagatatttcacaaaatttgaggacgaatttggctgatttttgaaaattcaaggacgaagttgaggtatta 41493847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 33256520 - 33256410
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 118  Q
    ||||||||||||  |||||||||||||||  |||||||  || ||| ||||||||||| | |||| | ||| ||| || |||||  | | |||||||| |    
T  33256520 gacggagggacttttttgatggacgtctgacaaattcaaagattaagttgatatttcgcataattgaaggatgaagttggccgacgtgtaaaaattcagg 33256421  T
Q  119 gacgaatttga 129  Q
    |||||||||||    
T  33256420 gacgaatttga 33256410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 19997225 - 19997164
Alignment:
Q  32 atttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 93  Q
    |||||||| | |||||| ||||||||| | ||||||||||||| ||||||||  ||||||||    
T  19997225 atttgatgaatgtctgttaaattcaggaagtaatttgatattttgaaaaatttggggacgaa 19997164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 28819388 - 28819348
Alignment:
Q  99 ccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||||| |||||||||||| |||||||| |||||||||    
T  28819388 ccgatttttaaaaattcaaggaggaatttgatgtattagtc 28819348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 7e-56; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 9121658 - 9121792
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  9121658 taacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatt 9121757  T
Q  105 tttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||||||| | |||||||||||||||    
T  9121758 tttcaaaattcaaggactattttgaggtattagtc 9121792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 47013072 - 47013206
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    ||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  47013072 taacggacattttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatt 47013171  T
Q  105 tttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||||||| | |||||||||||||||    
T  47013172 tttcaaaattcaaggactattttgaggtattagtc 47013206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 33602631 - 33602765
Alignment:
Q  2 tactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccg 101  Q
    ||||||||||| |||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||  |||    
T  33602631 tactaacggaccttttggacggagggactaatttgacggacgtctgtaaaattcagggactaatttgatatttcacaaaattcagggacgaaattgaccg 33602730  T
Q  102 atttttcaaaattcaaggacgaatttgaggtatta 136  Q
    |||||||||||||||||||||||||||||||||||    
T  33602731 atttttcaaaattcaaggacgaatttgaggtatta 33602765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 46583546 - 46583680
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    |||||||| |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||  ||||||    
T  46583546 taacggaccttttggacggagggacaaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattgaccgatt 46583645  T
Q  105 tttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||||||||||||||||||||||||||||||||    
T  46583646 tttcaaaattcaaggacgaatttgaggtattagtc 46583680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 4855956 - 4856090
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    |||||||  |||| |||||||||||   |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | || |||||||    
T  4855956 taacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttggccgatt 4856055  T
Q  105 tttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||| |||||||||||||||||||||||||||||||    
T  4856056 ttttaaaattcaaggacgaatttgaggtattagtc 4856090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 34778126 - 34778262
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| | || |||||    
T  34778126 actaacggagcttttggacggagggaccattttgatggacatctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttggccga 34778225  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| |||||||||||||||||||||||||||||||    
T  34778226 ttttttaaaattcaaggacgaatttgaggtattagtc 34778262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 46582129 - 46582010
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  46582129 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 46582030  T
Q  120 acgaatttgaggtattagtc 139  Q
    || |||||||||||||||||    
T  46582029 acaaatttgaggtattagtc 46582010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 139
Target Start/End: Complemental strand, 34776658 - 34776569
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34776658 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 34776569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 37345932 - 37346053
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||| |||||| | ||||||||||||||||||||    
T  37345932 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggtcgatttttcaaaattcaagg 37346031  T
Q  120 acgaatttgaggtattagtcct 141  Q
    ||||||||||||||||||||||    
T  37346032 acgaatttgaggtattagtcct 37346053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 8168061 - 8167942
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   | ||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  8168061 acggagggactgatttgattgacattttgtacattcagggactaatttgatatttcgcaaaattcagagacgaaattggccgatttttcaaaattcaagg 8167962  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  8167961 acgaatttgaggtattagtc 8167942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 8169538 - 8169657
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||| ||||||||| ||| | |   ||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||    
T  8169538 acggagggattgatttgattgacattttgtaaattcagggactaatttgatattttgtaaaattcagggacgaaattggccgatttttcaaaattcaagg 8169637  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  8169638 acgaatttgaggtattagtc 8169657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 25276861 - 25276742
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||||||    
T  25276861 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaagg 25276762  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  25276761 acgaatttgaggtattagtc 25276742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 50 - 139
Target Start/End: Complemental strand, 26223676 - 26223587
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  26223676 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 26223587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 9120158 - 9120039
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  9120158 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaagg 9120059  T
Q  120 acgaatttgaggtattagtc 139  Q
    || | |||||||||||||||    
T  9120058 actattttgaggtattagtc 9120039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 27089249 - 27089368
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||| ||||||||||||| ||| | |   ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||    
T  27089249 acggaaggactgatttgattgacattttgtaaattcagggattaatttgatatttcacaaaattcaaggacgaaatttgccgatttttcaaaattcaagg 27089348  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  27089349 acgaatttgaggtattagtc 27089368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 33 - 139
Target Start/End: Original strand, 31238513 - 31238619
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggt 132  Q
    |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||| || || |||||||||| ||||||||||||| ||||||||||    
T  31238513 tttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgattttttaaaattcaaggacaaatttgaggt 31238612  T
Q  133 attagtc 139  Q
    |||||||    
T  31238613 attagtc 31238619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 2869704 - 2869579
Alignment:
Q  14 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 113  Q
    |||| |||||||||||   |||||||||||||||||||||| || |||||| | ||||||||| |||||||||||||||| ||  ||||||||| |||||    
T  2869704 ttttggacggagggaccattttgatggacgtctgtaaaatttagagactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttgaaaat 2869605  T
Q  114 tcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||||||||    
T  2869604 tcaaggacgaatttgaggtattagtc 2869579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 6818666 - 6818802
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||| |  |||| |||||||||  || |||||    
T  6818666 actaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgctaaatccagggacgagtttggccga 6818765  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| |||||||||||||||||||||||||||||||    
T  6818766 ttttttaaaattcaaggacgaatttgaggtattagtc 6818802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 25278356 - 25278492
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   |||||||||||| ||||||||||| ||||||| | | ||||||| |||||||||||||||| ||  ||||    
T  25278356 actaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaataggtatttcgcaaaattcagggacgaatttgaccga 25278455  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| |||||||||||||||||||||||||||||||    
T  25278456 ttttttaaaattcaaggacgaatttgaggtattagtc 25278492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 37344478 - 37344339
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   |||||||||||| |||||||||||  |||||| | | ||||||| |||||||||||||||| ||  ||||    
T  37344478 actaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaagactaaataggtatttcgcaaaattcagggacgaatttgaccga 37344379  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtcctt 142  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  37344378 ttttttaaaattcaaggacgaatttgaggtattagtcctt 37344339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 47011575 - 47011456
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||| ||||| ||| | |   |||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  47011575 acggagggactgagttgattgactttttgtaaattcagggactaatttgatatttcgaaaaattcatggacgaaattgtccgatttttcaaaattcaagg 47011476  T
Q  120 acgaatttgaggtattagtc 139  Q
    || | |||||||||||||||    
T  47011475 actattttgaggtattagtc 47011456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 37 - 146
Target Start/End: Original strand, 25278975 - 25279084
Alignment:
Q  37 atggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 136  Q
    |||||||||||||||||||||||||||| | ||||||||| |||||| ||| ||||| || || ||||||| ||||||||||||||||||||||||||||    
T  25278975 atggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttaggaacgaatttggctgatttttgaaaattcaaggacgaatttgaggtatta 25279074  T
Q  137 gtccttttta 146  Q
    ||| ||||||    
T  25279075 gtcattttta 25279084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 1444151 - 1444270
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||| | |   ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||    
T  1444151 acggagggactaatttgattgacattttgtaaattcagggactaatttgatattttgaaaaattcagggacaaaattggccgatttttcaaaatttaagg 1444250  T
Q  120 acgaatttgaggtattagtc 139  Q
    || | |||||||||||||||    
T  1444251 actattttgaggtattagtc 1444270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 33 - 139
Target Start/End: Complemental strand, 27087389 - 27087283
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaattcaaggacgaatttgagg 131  Q
    |||||||||||| ||||||||||||||||||| | ||||||||| ||||||||||||| ||||||| ||||||||| |||||| ||||||||||||||||    
T  27087389 tttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggac-aaatttgaccgattttttaaaatttaaggacgaatttgagg 27087291  T
Q  132 tattagtc 139  Q
    ||||||||    
T  27087290 tattagtc 27087283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 4854499 - 4854409
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 140  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||||    
T  4854499 aaattcagggactaatttgatctttcgcaaaattcagggacgaaattgaacgatttttcaaaattcaaggacgaatttgaagtattagtcc 4854409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 3013498 - 3013600
Alignment:
Q  37 atggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 136  Q
    |||||||||||||||||||||||||||| | ||||||||| |||||||| ||||||| ||  | ||| ||| ||||||||||||||||||||||||||||    
T  3013498 atggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatggacgaatttgactgatgttttaaaattcaaggacgaatttgaggtatta 3013597  T
Q  137 gtc 139  Q
    |||    
T  3013598 gtc 3013600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 51896151 - 51896276
Alignment:
Q  14 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaa 112  Q
    |||| ||||||||||||  |||||||||| ||||||||||||||||||||| | ||||||||| ||||||||||||| ||||||| | ||||||| ||||    
T  51896151 ttttggacggagggactattttgatggacatctgtaaaattcagggactaaatagatatttcgcaaaattcagggac-aaatttgactgattttttaaaa 51896249  T
Q  113 ttcaaggacgaatttgaggtattagtc 139  Q
    || ||||||| ||||||||||| ||||    
T  51896250 tttaaggacggatttgaggtatcagtc 51896276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 50556085 - 50556221
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   |||||| ||||||||||||||| ||||||||| | ||||||||| ||||||||| |||||| ||  | ||    
T  50556085 actaacggagcttttggacggagggaccattttgatagacgtctgtaaaatttagggactaaatagatatttcgcaaaattcagagacgaatttgactga 50556184  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| ||||||||| |||||||||||| ||||||||    
T  50556185 ttttttaaaattcaaagacgaatttgagatattagtc 50556221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 31236938 - 31236819
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaattcaag 118  Q
    ||||||||||||||||||| ||  | |   ||||||||| ||||| | ||||||||| ||||||||||||| ||||||| ||||||||| ||||||||||    
T  31236938 acggagggactgatttgattgatattttgtaaattcaggaactaaatagatatttcgcaaaattcagggac-aaatttgaccgattttttaaaattcaag 31236840  T
Q  119 gacgaatttgaggtattagtc 139  Q
    |||||||||||||||||||||    
T  31236839 gacgaatttgaggtattagtc 31236819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 33599335 - 33599229
Alignment:
Q  22 ggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggac 121  Q
    ||||||||||||||||| ||| | |   |||||||| || ||||||||||||||| |||||||| ||||||| ||  |||||||||||||||||||||||    
T  33599335 ggagggactgatttgattgacattttgtaaattcagagattaatttgatatttcgcaaaattcatggacgaatttgaccgatttttcaaaattcaaggac 33599236  T
Q  122 gaatttg 128  Q
    |||||||    
T  33599235 gaatttg 33599229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 52642007 - 52641888
Alignment:
Q  20 acggagggactgatttgatggacgtct-gtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 118  Q
    |||||||||||||||||||| || | | ||||| || ||| ||||| |  |||||||| |||||||||||||||| || || ||||||| ||||||||||    
T  52642007 acggagggactgatttgatgaacattttgtaaatttgagg-actaaatatatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaag 52641909  T
Q  119 gacgaatttgaggtattagtc 139  Q
    |||||||||||||||||||||    
T  52641908 gacgaatttgaggtattagtc 52641888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 2871046 - 2871165
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   |||||||  ||| || | | ||||||| |||||||||||||||| || |||||||||| |||||||||||    
T  2871046 acggagggactgatttgattgacattttgtaaattcaaagacaaaatagctatttcgcaaaattcagggacgaatttagccgatttttaaaaattcaagg 2871145  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||| ||||||||    
T  2871146 acgaatttgagatattagtc 2871165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 1442655 - 1442599
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggac 61  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  1442655 taacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggac 1442599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 52643648 - 52643736
Alignment:
Q  48 taaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 136  Q
    ||||||||||||||||| |  |||||||| |||||||||||||||| ||  | ||||||| |||||| |||||||||||||||||||||    
T  52643648 taaaattcagggactaaataaatatttcgcaaaattcagggacgaatttaactgatttttaaaaatttaaggacgaatttgaggtatta 52643736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 37088106 - 37088225
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||| | |||| || | | ||||||| |||||||||| ||||| || |||||||||| |||||||||||    
T  37088106 acggagggactgatttgattgacattttgtaaatttaaggacaaaatagctatttcgcaaaattcaggaacgaatttggccgattttttaaaattcaagg 37088205  T
Q  120 acgaatttgaggtattagtc 139  Q
    | ||||||||||||||||||    
T  37088206 aagaatttgaggtattagtc 37088225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 138
Target Start/End: Complemental strand, 50554278 - 50554164
Alignment:
Q  24 agggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacga 123  Q
    ||||||||||||||| ||| | |   ||||||||| ||||| | | |||||   |||||||||||||||| ||  ||||||||| |||||||||||||||    
T  50554278 agggactgatttgattgacattttgcaaattcaggaactaaatagctattttacaaaattcagggacgaatttgaccgattttttaaaattcaaggacga 50554179  T
Q  124 atttgaggtattagt 138  Q
    |||||||||||||||    
T  50554178 atttgaggtattagt 50554164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 33599248 - 33599187
Alignment:
Q  78 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||||| ||||||| ||  |||||||||||||||||||||||||||||||||||||||||    
T  33599248 aaaattcaaggacgaatttgcccgatttttcaaaattcaaggacgaatttgaggtattagtc 33599187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 1442611 - 1442551
Alignment:
Q  78 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 138  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | | ||||||||||||    
T  1442611 aaaattcagggacgaaattggccgatttttcaaaattcaaggactattgtgaggtattagt 1442551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 3011974 - 3011858
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||| ||||||||||||| ||| | |   |||||||| |||||| | ||||||||| |||||||||| ||||| ||  | ||||||| |||||| ||||    
T  3011974 acggatggactgatttgattgacattttgtaaattcagagactaaatagatatttcgcaaaattcaggaacgaatttgactgattttttaaaatttaagg 3011875  T
Q  120 acgaatttgaggtatta 136  Q
    |||||||||||||||||    
T  3011874 acgaatttgaggtatta 3011858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 6816926 - 6816866
Alignment:
Q  78 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 138  Q
    |||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||    
T  6816926 aaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 6816866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 15104547 - 15104487
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 93  Q
    |||||||||||||||||||||||||||||||| | ||||||||| |||||||||| |||||    
T  15104547 tttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaacgaa 15104487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 25278934 - 25278854
Alignment:
Q  59 gactaatttgatatttcgaaaaattcagggacgaaatttgcc-gatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||| | ||||||||| ||||||||||||| ||||||| | ||||||| |||||||||||| ||||||||||||||||||    
T  25278934 gactaaatagatatttcgcaaaattcagggac-aaatttgactgatttttgaaaattcaaggatgaatttgaggtattagtc 25278854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 51894686 - 51894570
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaattcaag 118  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||| |  |||||||| ||||||||| ||| ||||||| || |||||| ||||||||||    
T  51894686 acggagggactgatttgattgacattttgtaaattcagggactaaatatatatttcgcaaaattcagagac-aaatttgacccattttttaaaattcaag 51894588  T
Q  119 gacgaatttgaggtatta 136  Q
     |||||||||| ||||||    
T  51894587 aacgaatttgatgtatta 51894570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 42134602 - 42134492
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 118  Q
    |||||||||||   |||||||||||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||  || |||||    | ||||||||||    
T  42134602 gacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccgtaaaaattcaag 42134503  T
Q  119 gacgaatttga 129  Q
    |||||||||||    
T  42134502 gacgaatttga 42134492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 139
Target Start/End: Complemental strand, 23577725 - 23577636
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||||  |||||||||||||||||| |||||| | || |||||||  |||||||||||  ||| ||||| |||||||| |||||||||    
T  23577725 aaattcattgactaatttgatatttcgcaaaattgaaggtcgaaattgcccgatttttcaggattgaaggatgaatttgatgtattagtc 23577636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 45045009 - 45044949
Alignment:
Q  79 aaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||||| |   || |||||| |||||||||||||||||||||||||||||||    
T  45045009 aaattcagggacgaattggaccaattttttaaaattcaaggacgaatttgaggtattagtc 45044949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 5783500 - 5783427
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcg 76  Q
    |||||||||| |||| |||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||    
T  5783500 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcg 5783427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 18183961 - 18184017
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcaggga 89  Q
    |||||||||||||||  ||||||||||||||| ||||||||||| | |||| |||||    
T  18183961 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgaggga 18184017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 36895528 - 36895588
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 93  Q
    |||||||||||||||  ||||||||||||||| ||||||||||| | |||| | |||||||    
T  36895528 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaa 36895588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 27940727 - 27940654
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 93  Q
    ||||||||||   |||||||||||||||  ||||||| ||| ||| ||||||||||| | |||| |||||||||    
T  27940727 acggagggacctttttgatggacgtctgataaattcaaggattaaattgatatttcgcataattgagggacgaa 27940654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 5e-54; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 32455881 - 32456016
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||    
T  32455881 taacggacattttggacggagggactgatttgatggacgtctgcaaaattcagtgactaatttgatatttcgaaaaattcagggacgaaattgaccgatt 32455980  T
Q  105 tttcaaaattcaaggacgaatttgaggtattagtcc 140  Q
    ||||||||||||||||| | ||||||||||||||||    
T  32455981 tttcaaaattcaaggactattttgaggtattagtcc 32456016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 3456882 - 3456766
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3456882 taacggatattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatt 3456783  T
Q  105 tttcaaaattcaaggac 121  Q
    |||||||||||||||||    
T  3456782 tttcaaaattcaaggac 3456766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 13613570 - 13613706
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    ||||| |||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||  ||||    
T  13613570 actaatggaccttttggacggagggactaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaatttgaccga 13613669  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||||||| |||||||||||    
T  13613670 tttttcaaaattcaaggacgaatttaaggtattagtc 13613706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 32518467 - 32518586
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  32518467 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaagg 32518566  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  32518567 acgaatttgaggtattagtc 32518586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 3480627 - 3480746
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3480627 acggagggactaatttgattgacattttgtaaattcagggactagtttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaagg 3480726  T
Q  120 acgaatttgaggtattagtc 139  Q
    || | |||||||||||||||    
T  3480727 actattttgaggtattagtc 3480746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 32454367 - 32454248
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  32454367 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcaaggacgaaattggccgatttttcaaaattcaagg 32454268  T
Q  120 acgaatttgaggtattagtc 139  Q
    || | |||||||||||||||    
T  32454267 actattttgaggtattagtc 32454248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 32439077 - 32439215
Alignment:
Q  1 ctactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgcc 100  Q
    |||||||| ||  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||| ||  ||    
T  32439077 ctactaacagatcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgacc 32439176  T
Q  101 gatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||| ||||||||| ||| |||||||||||||||||    
T  32439177 gattttttaaaattcaatgactaatttgaggtattagtc 32439215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 18645074 - 18645192
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||| ||||||||||||||||||| ||||||||| |||||| | | |||||||||||||||||||||    
T  18645074 acggagggactgatttgattgacattttgtaaattcatggactaatttgatatttcgcaaaattcagagacgaattgt-ccgatttttcaaaattcaagg 18645172  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  18645173 acgaatttgaggtattagtc 18645192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 20523491 - 20523367
Alignment:
Q  14 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 113  Q
    |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| |||||||| ||||||| ||  ||||||||| |||||    
T  20523491 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttgaccgatttttgaaaat 20523392  T
Q  114 tcaaggacgaatttgaggtattagt 138  Q
    || |||| |||||||| ||||||||    
T  20523391 tctaggaagaatttgatgtattagt 20523367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 32517013 - 32516877
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   |||||||||||| ||||||||||| || |||| | | ||||| | |||||||||||||||| ||  ||||    
T  32517013 actaacggagcttttggacggagggacaattttgatggacgtatgtaaaattcaagggctaaataggtattttgtaaaattcagggacgaatttgaccga 32516914  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| |||||||||||||||||||||||||||||||    
T  32516913 ttttttaaaattcaaggacgaatttgaggtattagtc 32516877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 10568535 - 10568403
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| ||||||||||||  |||||| ||||||||||||||||||||||||| |  ||||||||  ||||||| ||||||| ||  | ||    
T  10568535 actaacggagcttttggacggagggactattttgatagacgtctgtaaaattcagggactaaataaatatttcgctaaattcaaggacgaatttgactga 10568436  T
Q  103 tttttcaaaattcaaggacgaatttgaggtatt 135  Q
    ||||| ||||||||||||||||||||| |||||    
T  10568435 tttttgaaaattcaaggacgaatttgatgtatt 10568403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 7372957 - 7373079
Alignment:
Q  14 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 113  Q
    |||| |||||||||||   ||||||||||| |||||||||||||||||||| |  |||||||| |||||||||||||||| ||  || |||||| |||||    
T  7372957 ttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaataaatatttcgcaaaattcagggacgaatttgaccaatttttaaaaat 7373056  T
Q  114 tcaaggacgaatttgaggtatta 136  Q
    ||||  |||||||||||||||||    
T  7373057 tcaatcacgaatttgaggtatta 7373079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 10569888 - 10570008
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 118  Q
    |||||||||||||||||||||||| | |   ||||||  ||||||| | ||||||| | |||||||| ||||||| || || ||||||| ||||||||||    
T  10569888 gacggagggactgatttgatggacattttgtaaattcgaggactaaatagatattttgcaaaattcatggacgaatttggctgattttttaaaattcaag 10569987  T
Q  119 gacgaatttgaggtattagtc 139  Q
    |||||||||||||||||||||    
T  10569988 gacgaatttgaggtattagtc 10570008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 11355347 - 11355223
Alignment:
Q  14 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 113  Q
    |||| |||||||||||   |||| ||| ||||||||||||||||||| | | | ||||||||  ||||||||| |||||| ||  ||||||||| |||||    
T  11355347 ttttggacggagggaccattttggtggccgtctgtaaaattcagggagttaatagatatttcataaaattcagtgacgaatttgaccgattttttaaaat 11355248  T
Q  114 tcaaggacgaatttgaggtattagt 138  Q
    |||||||||||||||||||||||||    
T  11355247 tcaaggacgaatttgaggtattagt 11355223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 13610808 - 13610690
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgc-cgatttttcaaaattcaag 118  Q
    ||||||||||||||||||| ||| | |   ||||| | ||||||||||||||||||| ||||||||||||| |||||||  |||||||||||||||||||    
T  13610808 acggagggactgatttgattgacattttgtaaatt-atggactaatttgatatttcgcaaaattcagggac-aaatttgatcgatttttcaaaattcaag 13610711  T
Q  119 gacgaatttgaggtattagtc 139  Q
    ||||||||| |||||||||||    
T  13610710 gacgaatttaaggtattagtc 13610690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 50 - 139
Target Start/End: Original strand, 9400035 - 9400124
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||| |||||||||| ||||||||| |||||||| ||| ||| ||  | |||||||||||||||||||||||||||||||||||||||    
T  9400035 aaattcggggactaattagatatttcgcaaaattcaaggatgaatttgactgatttttcaaaattcaaggacgaatttgaggtattagtc 9400124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 11357164 - 11357289
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||| ||| |||||   |||||||||||||||| ||  ||||||||| |||||||||||    
T  11357164 acggagggactgatttgaatgacattttgtaaattcagggactaaattgctatttttcaaaattcagggacgaatttgaccgattttttaaaattcaagg 11357263  T
Q  120 acgaatttgaggtattagtccttttt 145  Q
    |||||||||| ||||||||| |||||    
T  11357264 acgaatttgatgtattagtctttttt 11357289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 6899621 - 6899485
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||| ||||||   ||||||||| |||||||||||| ||||||||| | ||||||||  |||||| || |||||| ||  | ||    
T  6899621 actaacggagcttttggacgaagggaccattttgatggatgtctgtaaaatttagggactaaatagatatttcacaaaatttagagacgaatttgactga 6899522  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  6899521 tttttgaaaattcaaggacaaatttgaggtattagtc 6899485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 32437208 - 32437140
Alignment:
Q  71 atttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  32437208 atttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacaaatttgaggtattagtc 32437140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 6902868 - 6902996
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||||||| | |   ||||||  ||||||| | |||||| || |||||| ||||||||| ||  | ||||||| |||||||||||    
T  6902868 acggagggactgatttgatggacattttgtaaattcgaggactaaatagatatt-cgcaaaatttagggacgaatttgactgatttttgaaaattcaagg 6902966  T
Q  120 acgaatttgaggtattagtcctttttataata 151  Q
    ||||||||||||||||||||  ||||||||||    
T  6902967 acgaatttgaggtattagtc--ttttataata 6902996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 7371244 - 7371175
Alignment:
Q  70 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||| ||||||||||||| || || |||||||||| |||||||||||||||| ||||||||||||||    
T  7371244 tatttcgcaaaattcagggaccaatttggccgatttttgaaaattcaaggacgaagttgaggtattagtc 7371175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 148
Target Start/End: Original strand, 20525304 - 20525432
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||| |||| || | | ||||| | |||||||||||| ||| ||  || |||||| ||||||||| |    
T  20525304 acggagggactgatttgattgacattttgtaaattcaaggacaaaatagctattttgcaaaattcagggatgaatttgacctatttttaaaaattcaaag 20525403  T
Q  120 acgaatttgaggtattagtcctttttata 148  Q
    |||||||||||||||||||| ||||||||    
T  20525404 acgaatttgaggtattagtcgtttttata 20525432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 8605353 - 8605414
Alignment:
Q  78 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||| ||||||||| || || ||||||| |||||||||||||||||||||||||||||||    
T  8605353 aaaatttagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 8605414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 14338480 - 14338584
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||   |||||||||||||||| |||||||||||  |||| || |||||| ||||||   ||||||| || || ||||||| |||||||||||    
T  14338480 acggagggaccattttgatggacgtctgtgaaattcagggatgaattagacatttcgcaaaatttgaggacgaatttggctgatttttaaaaattcaagg 14338579  T
Q  120 acgaa 124  Q
    |||||    
T  14338580 acgaa 14338584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 9398796 - 9398713
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcag 86  Q
    |||||||||  |||| |||||||||||   ||||||| |||||| ||||||||||||||||| | ||||||||| |||||||||    
T  9398796 actaacggaacttttggacggagggaccattttgatgaacgtctataaaattcagggactaaatagatatttcgcaaaattcag 9398713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 3018450 - 3018519
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||||||||  ||||||||||||||| ||||||||||| | |||| ||||||||| || |||||    
T  3018450 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccga 3018519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 21068744 - 21068628
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||  ||||||| | ||||||||| ||||||   ||||||| ||  | |||| || |||||||||||    
T  21068744 acggagggactgatttgattgacattttgtaaattcgaggactaaatagatatttcgtaaaatttgtggacgaatttgactgattgttgaaaattcaagg 21068645  T
Q  120 acgaatttgaggtatta 136  Q
    |||||||||||||||||    
T  21068644 acgaatttgaggtatta 21068628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 17952030 - 17952129
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||| |||| |||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  17952030 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccga 17952129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 7049882 - 7049828
Alignment:
Q  14 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttg 68  Q
    |||| |||||||||||   ||||||||||||||||||||||||||||| ||||||    
T  7049882 ttttggacggagggaccattttgatggacgtctgtaaaattcagggacgaatttg 7049828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 7049847 - 7049790
Alignment:
Q  78 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatt 135  Q
    |||||||||||||||| || || ||||||| |||||||||||| ||||||||| ||||    
T  7049847 aaaattcagggacgaatttggctgatttttgaaaattcaaggaagaatttgagatatt 7049790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 2968245 - 2968185
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 93  Q
    |||||||||||||||  ||||||||||| ||| ||||||||||| | |||| |||||||||    
T  2968245 tttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaa 2968185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 136
Target Start/End: Complemental strand, 21091144 - 21091109
Alignment:
Q  101 gatttttcaaaattcaaggacgaatttgaggtatta 136  Q
    ||||||| ||||||||||||||||||||||||||||    
T  21091144 gatttttgaaaattcaaggacgaatttgaggtatta 21091109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 35175862 - 35175977
Alignment:
Q  14 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 113  Q
    |||| |||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  |||||  | |||||| || ||||||   | |||||    
T  35175862 ttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggagacgaatttggccgatccctgaaaat 35175961  T
Q  114 tcaaggacgaatttga 129  Q
    ||||||||||| ||||    
T  35175962 tcaaggacgaaattga 35175977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 145
Target Start/End: Original strand, 7051263 - 7051340
Alignment:
Q  68 gatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 145  Q
    ||||||||| ||||||||| |||||| ||  | ||||||| |||||||||   ||||||| ||||||||||| |||||    
T  7051263 gatatttcgcaaaattcagagacgaatttgactgattttttaaaattcaaattcgaatttaaggtattagtcattttt 7051340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 5e-54; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 43519554 - 43519423
Alignment:
Q  9 ggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttc 108  Q
    |||| |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  43519554 ggaccttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttc 43519455  T
Q  109 aaaattcaaggacgaatttgaggtattagtcc 140  Q
    ||||||||||||||||||||||||||||||||    
T  43519454 aaaattcaaggacgaatttgaggtattagtcc 43519423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 4173710 - 4173830
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||| ||||| ||||| |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  4173710 acggagggactgagttgattgacgttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 4173809  T
Q  120 acgaatttgaggtattagtcc 140  Q
    |||||||||||||||||||||    
T  4173810 acgaatttgaggtattagtcc 4173830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 43507286 - 43507167
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  43507286 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 43507187  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  43507186 acgaatttgaggtattagtc 43507167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 43508623 - 43508742
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  43508623 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 43508722  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  43508723 acgaatttgaggtattagtc 43508742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 33265980 - 33266100
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||     
T  33265980 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaaga 33266079  T
Q  120 acgaatttgaggtattagtcc 140  Q
    ||||||||||| |||||||||    
T  33266080 acgaatttgagatattagtcc 33266100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 319392 - 319273
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    |||||||||||| |||||| ||| | |   ||||||||| ||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  319392 acggagggactggtttgattgacattttgtaaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaagg 319293  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  319292 acgaatttgaggtattagtc 319273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 5437930 - 5437811
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5437930 acggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaaatttgccgatttttcaaaattcaagg 5437831  T
Q  120 acgaatttgaggtattagtc 139  Q
    || | |||||||||||||||    
T  5437830 actattttgaggtattagtc 5437811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 33264501 - 33264382
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||| ||||||||||||||| | |||||||||||||||||||  |||||||||||||||||||||    
T  33264501 acggagggactgatttgattgacattttgtaaattcaggaactaatttgatattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaagg 33264402  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  33264401 acgaatttgaggtattagtc 33264382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 49523260 - 49523125
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   ||||||| |||||||||||||||||||||||| | ||||||||| |||||||| ||||||| || |||||    
T  49523260 actaacggattttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatggacgaatttagccga 49523161  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagt 138  Q
    ||||| ||||||||| ||||||||||||||||||||    
T  49523160 ttttttaaaattcaatgacgaatttgaggtattagt 49523125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 51013856 - 51013975
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||| ||||||||||| | |||||||||||||||||||  |||||||||||||||||||||    
T  51013856 acggagggactgatttgattgacattttgtaaattcagggactcatttgatattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaagg 51013955  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  51013956 acgaatttgaggtattagtc 51013975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 41761745 - 41761867
Alignment:
Q  14 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 113  Q
    |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| ||||||  |||||||| || |||||||||| |||||    
T  41761745 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttcgggacgaatttggccgatttttgaaaat 41761844  T
Q  114 tcaaggacgaatttgaggtatta 136  Q
    |||||||||||||||||||||||    
T  41761845 tcaaggacgaatttgaggtatta 41761867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 833342 - 833223
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  833342 acggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaagg 833243  T
Q  120 acgaatttgaggtattagtc 139  Q
    || | |||||||||||||||    
T  833242 actattttgaggtattagtc 833223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 5439617 - 5439736
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  5439617 acggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaagg 5439716  T
Q  120 acgaatttgaggtattagtc 139  Q
    || | |||||||||||||||    
T  5439717 actattttgaggtattagtc 5439736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 320870 - 320989
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||| ||||| ||| | |   || |||| ||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||||||    
T  320870 acggagggactgagttgattgacattttgtaatttcaaggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaagg 320969  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  320970 acgaatttgaggtattagtc 320989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 835012 - 835131
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||||| |   |||||||||||||| |||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||    
T  835012 acggagggactaatttgattgacgttttgtaaattcagggactattttgatatttcgaataattcagggacaaaattggtcgatttttcaaaattcaagg 835111  T
Q  120 acgaatttgaggtattagtc 139  Q
    || | |||||||||||||||    
T  835112 actattttgaggtattagtc 835131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 4169805 - 4169686
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    |||||||||||| |||||| ||| | |   ||||||||||||||||||||||||||| ||||||||| |||||||||   | ||||||||||||||||||    
T  4169805 acggagggactggtttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagagacgaaattgatcaatttttcaaaattcaagg 4169706  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  4169705 acgaatttgaggtattagtc 4169686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 35401868 - 35401749
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||| ||||||| | ||||||||  |||||||||||||||| || |||||||||| |||||||||||    
T  35401868 acggagggactgatttgattgacattttgtaaattcaaggactaaatagatatttcacaaaattcagggacgaatttggccgattttttaaaattcaagg 35401769  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  35401768 acgaatttgaggtattagtc 35401749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 41781675 - 41781530
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttg-ccg 101  Q
    |||||||||  |||| |||||||||||   ||||||||| |||||||||||||||||||||| |  |||||| | ||||||||||||| ||||||| |||    
T  41781675 actaacggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggactaaataaatattttgcaaaattcagggac-aaatttgaccg 41781577  T
Q  102 atttttcaaaattcaaggacgaatttgaggtattagtcctttttata 148  Q
    |||||| |||||||||| || ||||||||||||||||| || |||||    
T  41781576 attttttaaaattcaagaacaaatttgaggtattagtcattattata 41781530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 51012064 - 51011926
Alignment:
Q  1 ctactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgcc 100  Q
    |||||||| ||  |||| |||||||||||   ||||||||||||||||||||||||| |||||| | ||||||||| |||||||| | | ||| ||  ||    
T  51012064 ctactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcaagaaagaatttgacc 51011965  T
Q  101 gatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||| |||||||||||||||||||||| ||||||||    
T  51011964 gattttttaaaattcaaggacgaatttgagatattagtc 51011926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 48813893 - 48813786
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggt 132  Q
    |||||||||||||| ||||||||||| ||||| |  |||||| | ||||||||||||  || || || ||||||| ||||||||||||||||||||||||    
T  48813893 tttgatggacgtctataaaattcaggaactaaatatatattttgcaaaattcagggataaatttggctgatttttgaaaattcaaggacgaatttgaggt 48813794  T
Q  133 attagtcc 140  Q
    ||||||||    
T  48813793 attagtcc 48813786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 49524703 - 49524822
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||| ||||||||||||| ||| | |   ||||||||||||||| | | ||||| | |||||||||||||||| ||  ||||||||| |||||||||||    
T  49524703 acggaaggactgatttgattgacattttgtaaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgattttttaaaattcaagg 49524802  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  49524803 acgaatttgaggtattagtc 49524822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 39345683 - 39345574
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    |||||| |||||||||||| ||| | |   ||||||||||||||| | | ||||||| |||||||||||||||| || |||||||||| |||||||||||    
T  39345683 acggagagactgatttgattgacattttgtaaattcagggactaaatagctatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagg 39345584  T
Q  120 acgaatttga 129  Q
    ||||||||||    
T  39345583 acgaatttga 39345574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 35404433 - 35404569
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||| ||||   |||| ||||||||||||||||||||||| ||| |  |||||||| |||||| | ||||||| || |||||    
T  35404433 actaacggagcttttggacggatggaccattttgttggacgtctgtaaaattcagggattaaataaatatttcgcaaaattgaaggacgaatttagccga 35404532  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| |||||||||| | |||| |||||||||||||    
T  35404533 ttttttaaaattcaagtatgaatctgaggtattagtc 35404569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 20493946 - 20493827
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||| ||||| | ||||||||| |||||||| | ||||| || |||||| ||| ||||||||| |    
T  20493946 acggagggactgatttgattgacattttgtaaattcaggaactaaatagatatttcgcaaaattcaagaacgaatttggccgatattttaaaattcaatg 20493847  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  20493846 acgaatttgaggtattagtc 20493827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 43521109 - 43521193
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtat 134  Q
    ||||||||||||||||||||||||||| ||||||||   ||||||||  | |||||||||||||||||| || ||||||||||||    
T  43521109 aaattcagggactaatttgatatttcgcaaaattcaaaaacgaaattgactgatttttcaaaattcaagaacaaatttgaggtat 43521193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 48645374 - 48645255
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||| |||||||||||| || | |   ||||||  ||||||| | ||||||||| |||||||| ||||||| ||  | ||||||| |||||||||||    
T  48645374 acggaggtactgatttgatgaacattttgtaaattcgaggactaaatagatatttcgcaaaattcatggacgaatttgactgatttttgaaaattcaagg 48645275  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  48645274 acgaatttgaggtattagtc 48645255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 11601786 - 11601674
Alignment:
Q  23 gagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaattcaaggac 121  Q
    ||||||||  ||||||||||||||||||||||||||||||||| | |||||| | ||||||  ||||  ||||||| | ||||||| |||||||||| ||    
T  11601786 gagggactattttgatggacgtctgtaaaattcagggactaatat-atattttgcaaaatttgggga-taaatttgactgatttttgaaaattcaagaac 11601689  T
Q  122 gaatttgaggtatta 136  Q
    |||||| ||||||||    
T  11601688 gaattttaggtatta 11601674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 11254238 - 11254113
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||| |||| ||   | ||||||| |||||| || |||| | || |||||||||| |||||||||||    
T  11254238 acggagggactgatttgattgacattttgtaaattcaaggacaaaagagctatttcgcaaaatttagagacggatttggccgatttttaaaaattcaagg 11254139  T
Q  120 acgaatttgaggtattagtccttttt 145  Q
    |||||||||||||||| ||| |||||    
T  11254138 acgaatttgaggtatttgtcattttt 11254113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 39083775 - 39083676
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||| |||| |||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  ||||| ||||||||| || |||||    
T  39083775 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccga 39083676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 48646765 - 48646852
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagga 120  Q
    ||||||| | |||||||||||||||||||||| | |||||||||  ||||||| ||||||| || || || |||| ||||||||||||    
T  48646765 tttgatgaaggtctgtaaaattcagggactaaatagatatttcgctaaattcaaggacgaatttagctgacttttgaaaattcaagga 48646852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 42980760 - 42980684
Alignment:
Q  14 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 90  Q
    |||| |||||||||||   |||||||||||||||||||||| ||||||||| | || |||||| |||||||| ||||    
T  42980760 ttttggacggagggaccattttgatggacgtctgtaaaattaagggactaaatagaaatttcgtaaaattcatggac 42980684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 129
Target Start/End: Original strand, 44558511 - 44558607
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 129  Q
    |||||||||||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||| || |||||    | |||||||||||||||| ||||    
T  44558511 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattcaaggacgaagttga 44558607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 5484676 - 5484577
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||| |||| |||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  5484676 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccga 5484577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 39921630 - 39921531
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||| |||| |||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  39921630 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccga 39921531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 43779855 - 43779954
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||| |||| |||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  43779855 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccga 43779954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 2691485 - 2691368
Alignment:
Q  27 gactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatt 126  Q
    |||||||||||| ||| | |  |||||||||||||||| | ||||||| | ||||||   ||||||| || || ||||||| ||||||||| || ||| |    
T  2691485 gactgatttgattgacattttaaaaattcagggactaaatagatattttgcaaaatttgtggacgaatttggctgatttttgaaaattcaa-gatgaagt 2691387  T
Q  127 tgaggtattagtccttttt 145  Q
    |||||||||| ||||||||    
T  2691386 tgaggtattattccttttt 2691368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 39189516 - 39189419
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||| |||| |||||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  39189516 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccga 39189419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 44794765 - 44794838
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 93  Q
    ||||||||||   |||||||||||||||  ||||||||||| ||| ||||||||||| | |||| |||||||||    
T  44794765 acggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaa 44794838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 138
Target Start/End: Complemental strand, 20820096 - 20819986
Alignment:
Q  28 actgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgcc-gatttttcaaaattcaaggacgaatt 126  Q
    ||||||||||| ||| | |  |||||||||||||||| |  |||||| | |||||| ||| |  ||||||| | ||||||| |||||||||||||||| |    
T  20820096 actgatttgattgacattttgaaaattcagggactaaataaatattttgcaaaatttaggaat-aaatttgactgatttttgaaaattcaaggacgaagt 20819998  T
Q  127 tgaggtattagt 138  Q
    ||||||||||||    
T  20819997 tgaggtattagt 20819986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 27624912 - 27624869
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcg 76  Q
    |||||||||||||||  ||||||||||||||| |||||||||||    
T  27624912 tttgatggacgtctgacaaattcagggactaagttgatatttcg 27624869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 32652235 - 32652136
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||| |||| |||||||||||  | ||||||||||||    ||||||| |||||| ||||||||||||  |||||  |||||||| || |||||    
T  32652235 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcaaggactattttgatatttcgttaaattgggggacgaatttggccga 32652136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 42982422 - 42982541
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||| |||| || |   ||||||| |||||||||||||||| ||  | ||||||| |||||||||||    
T  42982422 acggagggactgatttgattgacattttgtaaattcaaggacaaaataactatttcgcaaaattcagggacgaatttgacagatttttaaaaattcaagg 42982521  T
Q  120 acgaatttgaggtattagtc 139  Q
    |  ||||| | |||||||||    
T  42982522 aaaaatttaacgtattagtc 42982541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 44994275 - 44994374
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||| |||| || ||||||||  | ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  44994275 actaacggaccttttggatggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccga 44994374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 52868167 - 52868254
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagga 120  Q
    |||||| | ||||||| |||||||| |||||| | ||||||||| |||||| |  |||||| ||  ||||||||| ||||||||||||    
T  52868167 tttgataggcgtctgttaaattcagagactaaatagatatttcgcaaaatttatagacgaatttgaccgattttttaaaattcaagga 52868254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 35996183 - 35996109
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 93  Q
    |||||||||||   |||||||||||||||  ||||||||||| ||| ||||||||| | | |||| |||||||||    
T  35996183 gacggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcacaattgagggacgaa 35996109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 10372711 - 10372820
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||   |||||||||||||||  |||||||||||  || ||||||||||| | |||| |||||| || || |||||    | |||||||| ||    
T  10372711 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgatatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggg 10372810  T
Q  120 acgaatttga 129  Q
    ||||||||||    
T  10372811 acgaatttga 10372820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 47941930 - 47941857
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 93  Q
    ||||||||||   |||||||||||||||  ||||||||||| ||| ||||||||||| | |||| || ||||||    
T  47941930 acggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagagacgaa 47941857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 2693285 - 2693373
Alignment:
Q  48 taaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 136  Q
    |||||||||  |||||| | ||||||||| |||||| ||| |  || || || ||||||| ||||||||| |||||| |||||||||||    
T  2693285 taaaattcaaagactaaatagatatttcgcaaaatttaggaataaatttggctgattttttaaaattcaaagacgaagttgaggtatta 2693373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 2827524 - 2827468
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttc 75  Q
    |||||||||||   |||||||||||||||  ||||||| ||||||| ||||||||||    
T  2827524 gacggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttc 2827468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 13450998 - 13451058
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 93  Q
    |||||||||||||||  ||||||| |||||| ||||||||||||  |||||  ||||||||    
T  13450998 tttgatggacgtctgataaattcaaggactattttgatatttcgttaaattgggggacgaa 13451058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 107; Significance: 2e-53; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 3428 - 3294
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    |||||||| |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||    
T  3428 taacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattggccgatt 3329  T
Q  105 tttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||||||||||||||||||||||||||||||||    
T  3328 tttcaaaattcaaggacgaatttgaggtattagtc 3294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 4600 - 4466
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    |||||||| |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||    
T  4600 taacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattggccgatt 4501  T
Q  105 tttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||||||||||||||||||||||||||||||||    
T  4500 tttcaaaattcaaggacgaatttgaggtattagtc 4466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 14313 - 14432
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14313 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaagg 14412  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  14413 acgaatttgaggtattagtc 14432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 4e-51; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 6785991 - 6786125
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||| |||||||    
T  6785991 taacagacattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattaagggacgaaattggccgatt 6786090  T
Q  105 tttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||||||| | |||||||||||||||    
T  6786091 tttcaaaattcaaggactattttgaggtattagtc 6786125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 24208061 - 24208186
Alignment:
Q  14 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  24208061 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaat 24208160  T
Q  114 tcaaggacgaatttgaggtattagtc 139  Q
    |||||||  | |||||||||||||||    
T  24208161 tcaaggagtattttgaggtattagtc 24208186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 37020642 - 37020508
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||| |||||  ||||||    
T  37020642 taacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcaaaaaattcaaggacaaaattgaccgatt 37020543  T
Q  105 tttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||||||| | |||||||||||||||    
T  37020542 tttcaaaattcaaggactattttgaggtattagtc 37020508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 3 - 145
Target Start/End: Original strand, 39664756 - 39664898
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||||| || |||||    
T  39664756 actaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgtaaaattcggggacgaatttggccga 39664855  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtccttttt 145  Q
    ||||| ||||||||||||||||||||||||||||||| |||||    
T  39664856 ttttttaaaattcaaggacgaatttgaggtattagtcattttt 39664898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 16763212 - 16763076
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||| || ||||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||| ||  ||||    
T  16763212 actaacagagattttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccga 16763113  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| |||||||||||||||||||||||||||||||    
T  16763112 tttttaaaaattcaaggacgaatttgaggtattagtc 16763076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 24205717 - 24205593
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||| | |   ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24205717 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaagg 24205618  T
Q  120 acgaatttgaggtattagtcctttt 144  Q
    || | ||||||||||||||||||||    
T  24205617 actattttgaggtattagtcctttt 24205593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 14387468 - 14387349
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  14387468 acggagggacttatttgattgacattttgtaaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaagg 14387369  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  14387368 acgaatttgaggtattagtc 14387349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 16764581 - 16764700
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    |||||||||||| |||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||    
T  16764581 acggagggactggtttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttctcaaaattcaagg 16764680  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  16764681 acgaatttgaggtattagtc 16764700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 40560348 - 40560223
Alignment:
Q  14 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 113  Q
    |||| ||||||||||||  |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||| || || ||||||| |||||    
T  40560348 ttttggacggagggactattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggctgattttttaaaat 40560249  T
Q  114 tcaaggacgaatttgaggtattagtc 139  Q
    |||| ||||||||||| |||||||||    
T  40560248 tcaaagacgaatttgaagtattagtc 40560223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 37022155 - 37022274
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||| | |   ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  37022155 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggtcgatttttcaaaattcaagg 37022254  T
Q  120 acgaatttgaggtattagtc 139  Q
    || | |||||||||||||||    
T  37022255 actattttgaggtattagtc 37022274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 2577450 - 2577575
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||    
T  2577450 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcaaaaaattcagggacgaaattggacgatttttcaaaattcaagg 2577549  T
Q  120 acgaatttgaggtattagtccttttt 145  Q
    || | ||||||||||||||| |||||    
T  2577550 actattttgaggtattagtcattttt 2577575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 44709764 - 44709889
Alignment:
Q  14 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 113  Q
    |||| |||||||||||   |||||||||||||||||||||||||||||||| | | ||||||| ||||||||||| |||| || |||| ||||| |||||    
T  44709764 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagttatttcgcaaaattcagggccgaatttggccggttttttaaaat 44709863  T
Q  114 tcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||||||||    
T  44709864 tcaaggacgaatttgaggtattagtc 44709889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 14389090 - 14389228
Alignment:
Q  1 ctactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgcc 100  Q
    ||||||||| |  |||| |||||||||||   |||||||||| | || |||||||||||||||| | ||||||||| |||||||||||||||| || |||    
T  14389090 ctactaacgaaacttttggacggagggaccattttgatggacatttggaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggcc 14389189  T
Q  101 gatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  14389190 gatttttgaaaattcaatgacgaatttgaggtattagtc 14389228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 19908254 - 19908391
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   ||||| |||||||||||||||||| ||||||| | ||||||||| ||||||||||||| || || |||||    
T  19908254 actaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaatttggccga 19908353  T
Q  103 -tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
     ||||| |||||||||||||||||||||||||||||||    
T  19908354 tttttttaaaattcaaggacgaatttgaggtattagtc 19908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 40561848 - 40561967
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    |||||||||| |||||||| ||| | |   ||||||||||||||||||| ||||||  ||||||||| ||||||||| |||||||||||||||||||| |    
T  40561848 acggagggaccgatttgattgacattttgtaaattcagggactaatttgctatttcacaaaattcagagacgaaattggccgatttttcaaaattcaaag 40561947  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  40561948 acgaatttgaggtattagtc 40561967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 2767070 - 2766929
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| ||| |||||||   |||||| ||||||||||||||||||||||||| | ||||||||| |||||||| ||||||  ||  ||||    
T  2767070 actaacggagcttttggacagagggaccattttgatagacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgagtttgaccga 2766971  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtcctttt 144  Q
    ||||| |||||||||||||||||||||| |||||||| ||||    
T  2766970 tttttaaaaattcaaggacgaatttgagctattagtcatttt 2766929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 50 - 139
Target Start/End: Complemental strand, 6783453 - 6783364
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||  ||||||||| ||||||||||||| | |||||||||||||||    
T  6783453 aaattcagggactaatttgatattttgaataattcagggacgaaattgaccgattttttaaaattcaaggactattttgaggtattagtc 6783364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 17696342 - 17696209
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| ||||||| |||   |||||| ||||| ||||||||||||||||||| | |||||||   |||||||||||| ||| || |||||    
T  17696342 actaacggagcttttggacggagtgaccattttgattgacgtttgtaaaattcagggactaaatagatattttccaaaattcagggatgaatttggccga 17696243  T
Q  103 tttttcaaaattcaaggacgaatttgaggtatta 136  Q
    ||||| ||||||||||||||||||||||||||||    
T  17696242 tttttgaaaattcaaggacgaatttgaggtatta 17696209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 39663273 - 39663153
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||| | | ||||| | |||||||||||||||| ||  ||||||||| |||||||||||    
T  39663273 acggagggactgatttgattgacattttgtaaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgatttttaaaaattcaagg 39663174  T
Q  120 acgaatttgaggtattagtcc 140  Q
    |||||||| ||||||||||||    
T  39663173 acgaattttaggtattagtcc 39663153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 16376855 - 16376736
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||  | |   ||||||||||||||| | | ||||||| |||||||||||||||| ||  ||||||||| ||||||||| |    
T  16376855 acggagggactgatttgattgatattttgtaaattcagggactaaatagctatttcgtaaaattcagggacgaatttgaccgattttttaaaattcaaag 16376756  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  16376755 acgaatttgaggtattagtc 16376736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 42519213 - 42519346
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcg-aaaaattcagggacgaaatttgccg 101  Q
    |||||||||  |||| || ||||||||   |||||||||||||||||||||||||||||||| | ||||||| | ||||||||| |||| || ||   |     
T  42519213 actaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaaattcaaggactaatttgatca 42519312  T
Q  102 atttttcaaaattcaaggacgaatttgaggtatt 135  Q
    |||||| |||||||||||||||||||||||||||    
T  42519313 attttttaaaattcaaggacgaatttgaggtatt 42519346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 19581526 - 19581414
Alignment:
Q  27 gactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatt 126  Q
    |||||||||||||||| | ||  ||||||  ||||||| | ||||||||| ||||||||||||| || || || ||||||| |||||| |||||||||||    
T  19581526 gactgatttgatggacatttggtaaattcgaggactaaatagatatttcgcaaaattcagggacaaatttggctgatttttaaaaatttaaggacgaatt 19581427  T
Q  127 tgaggtattagtc 139  Q
    |||||||||||||    
T  19581426 tgaggtattagtc 19581414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 19906801 - 19906685
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   |||||  |||||||| | ||||||||| |||||||||||||||| ||  ||||||||| |||||||||||    
T  19906801 acggagggactgatttgattgacattttgtaaattatgggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaagg 19906702  T
Q  120 acgaatttgaggtatta 136  Q
    |||||||| ||||||||    
T  19906701 acgaatttaaggtatta 19906685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 6797613 - 6797506
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggt 132  Q
    |||||| ||||||||||||||| ||||||||| | ||||||||| |||||||||| ||||| || ||| |||||| |||||||||  | |||||| ||||    
T  6797613 tttgatagacgtctgtaaaattaagggactaaatagatatttcgcaaaattcaggaacgaatttagccaattttttaaaattcaaatatgaatttaaggt 6797514  T
Q  133 attagtcc 140  Q
    ||||||||    
T  6797513 attagtcc 6797506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 33 - 139
Target Start/End: Complemental strand, 39455275 - 39455169
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggt 132  Q
    |||||||||||||||||||||||| ||||||| | ||||||| | ||||||||||   ||| ||  ||||||||| ||||||||||||| |||||||| |    
T  39455275 tttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcaggactgaatttaaccgattttttaaaattcaaggacaaatttgagat 39455176  T
Q  133 attagtc 139  Q
    |||||||    
T  39455175 attagtc 39455169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 34400383 - 34400313
Alignment:
Q  70 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 140  Q
    ||||||| |||||||||||| ||| || |||||||||| |||||||||||| |||||||||||||||||||    
T  34400383 tatttcgcaaaattcagggatgaatttggccgatttttgaaaattcaaggatgaatttgaggtattagtcc 34400313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 39456750 - 39456875
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||| ||||||||||||| ||| | |   ||||||||||||||| | | ||||| | |||||||| ||||||| ||  || |||||| |||||||||||    
T  39456750 acggatggactgatttgattgacattttataaattcagggactaaatagctattttgcaaaattcatggacgaatttaaccaattttttaaaattcaagg 39456849  T
Q  120 acgaatttgaggtattagtccttttt 145  Q
    | |||||||| ||||||||| |||||    
T  39456850 atgaatttgaagtattagtcgttttt 39456875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 11023001 - 11023100
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||| |||| ||||||||||| || ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  11023001 actaacggaccttttggacggagggacggaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgggggacgaatttggccga 11023100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 16377205 - 16377292
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 90  Q
    |||||||||  |||| |||||||||||   |||||||||||| ||||||||||| ||||||| | ||||||| | |||||||||||||    
T  16377205 actaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaatagatattttgcaaaattcagggac 16377292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 42517599 - 42517558
Alignment:
Q  98 gccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  42517599 gccgatttttaaaaattcaaggacgaatttgaggtattagtc 42517558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 37417379 - 37417287
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaat 125  Q
    |||||||||||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||| || |||||    | |||||||||||||||||    
T  37417379 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccatgaaaattcaaggacgaat 37417287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 136
Target Start/End: Original strand, 6799436 - 6799494
Alignment:
Q  78 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 136  Q
    |||||||| ||||||| ||  ||||||||| |||||||||||||||||||||| |||||    
T  6799436 aaaattcatggacgaatttgtccgatttttaaaaattcaaggacgaatttgagatatta 6799494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 11315339 - 11315449
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 118  Q
    |||||||||||   |||||||||||||||  ||||||||| |||| ||||||||||||  |||||  || ||||| || |||||||  | |||||| |||    
T  11315339 gacggagggaccattttgatggacgtctgacaaattcaggaactattttgatatttcgttaaattagggaacgaatttggccgattcataaaaatttaag 11315438  T
Q  119 gacgaatttga 129  Q
    |||||| ||||    
T  11315439 gacgaagttga 11315449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 26584821 - 26584895
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 93  Q
    ||||||||||   ||||||||||||||| | ||||| ||||| ||||||||||||| ||||| || |||||||||    
T  26584821 gacggagggatgaatttgatggacgtctattaaattgagggattaatttgatattttgaaaacttgagggacgaa 26584895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 4046403 - 4046352
Alignment:
Q  32 atttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt 83  Q
    |||||||||||| |||| ||||| || ||||||||||||||||| |||||||    
T  4046403 atttgatggacgactgttaaatttagagactaatttgatatttcaaaaaatt 4046352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 29909664 - 29909735
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 90  Q
    |||||||||||   |||||||||||||||  ||||| ||||||||| ||||||||||| | |||| ||||||    
T  29909664 gacggagggacctttttgatggacgtctgacaaattaagggactaaattgatatttcgcataattgagggac 29909735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 361561 - 361455
Alignment:
Q  23 gagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacg 122  Q
    |||||||| | ||||||||||||||   ||||||  |||||||||||||||||  | |||| ||||| ||  || |||||||  | ||||||||||||||    
T  361561 gagggactaaattgatggacgtctgacgaattcaatgactaatttgatatttcacataattgagggatgattttggccgattcatgaaaattcaaggacg 361462  T
Q  123 aatttga 129  Q
    || ||||    
T  361461 aagttga 361455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 37645607 - 37645490
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 118  Q
    |||||||||||   ||||||  || |||| |||||||| ||||||| | ||||||||  |||||| | ||||||| |   | ||||||| ||||||||||    
T  37645607 gacggagggacaattttgataaacatctgcaaaattcaaggactaaatagatatttcctaaaatttaaggacgaattcgactgatttttaaaaattcaag 37645508  T
Q  119 gacgaatttgaggtatta 136  Q
    |||||| ||| |||||||    
T  37645507 gacgaagttggggtatta 37645490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 15432434 - 15432378
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcaggga 89  Q
    |||||||||||||||  |||||||| |||||| ||||||||||| | |||| |||||    
T  15432434 tttgatggacgtctgacaaattcagagactaaattgatatttcgcataattgaggga 15432378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 7e-50; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 5 - 145
Target Start/End: Original strand, 3152228 - 3152368
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||    
T  3152228 taacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatt 3152327  T
Q  105 tttcaaaattcaaggacgaatttgaggtattagtccttttt 145  Q
    |||||||||| |||||  ||||||||||||||||| |||||    
T  3152328 tttcaaaatttaaggataaatttgaggtattagtcgttttt 3152368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 2660346 - 2660218
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    |||| ||| |||| |||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||    
T  2660346 taacagaccttttggacggagggacgaatttgatggacgtctgtaaaattcaaggactaatttgatatttcgcaaaattcagggacgaaattggtcgatt 2660247  T
Q  105 tttcaaaattcaaggacgaatttgaggta 133  Q
    |||||||||||||||||||||||||||||    
T  2660246 tttcaaaattcaaggacgaatttgaggta 2660218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 44794341 - 44794208
Alignment:
Q  5 taacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatt 104  Q
    |||||||| |||| |||||||||||  ||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||| |||||| ||||| |    
T  44794341 taacggaccttttggacggagggacgaatttgatggacttctgcaaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccga-t 44794243  T
Q  105 tttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||||||||||||||||||||||||||||||||    
T  44794242 tttcaaaattcaaggacgaatttgaggtattagtc 44794208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 53190767 - 53190903
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||| || |||||    
T  53190767 actaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccga 53190866  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| |||||||||||||||||||||||||||||||    
T  53190867 ttttttaaaattcaaggacgaatttgaggtattagtc 53190903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 46308926 - 46308807
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  46308926 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 46308827  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  46308826 acgaatttgaggtattagtc 46308807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 38193480 - 38193599
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||| ||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  38193480 acggatggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 38193579  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  38193580 acgaatttgaggtattagtc 38193599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 53094243 - 53094362
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  53094243 acggagggactcatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 53094342  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  53094343 acgaatttgaggtattagtc 53094362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 54900044 - 54900163
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   |||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  54900044 acggagggactgatttgattgacattttgtaaattcagggacaaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 54900143  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  54900144 acgaatttgaggtattagtc 54900163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 41979352 - 41979442
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 140  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41979352 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcc 41979442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 3150369 - 3150252
Alignment:
Q  22 ggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggac 121  Q
    ||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  3150369 ggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggac 3150270  T
Q  122 gaatttgaggtattagtc 139  Q
    ||||||||||||||||||    
T  3150269 gaatttgaggtattagtc 3150252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 41977875 - 41977750
Alignment:
Q  14 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 113  Q
    |||| |||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||| | || |||||||||| |||||    
T  41977875 ttttggacggagggaccattttgacggacgtctgtaaaattcagggactaatttgatatttcgccaaattcagggacgtatttggccgattttttaaaat 41977776  T
Q  114 tcaaggacgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||||||||    
T  41977775 tcaaggacgaatttgaggtattagtc 41977750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 27899089 - 27899225
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   ||| |||||||||||||||||||||||||||| | ||||||||| |||||||| ||||||| || |||||    
T  27899089 actaacggagcttttggacggagggaccatttttatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccga 27899188  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| |||||||||||||||||||||||||||||||    
T  27899189 ttttttaaaattcaaggacgaatttgaggtattagtc 27899225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 38192014 - 38191895
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||| ||||    
T  38192014 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaagg 38191915  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  38191914 acgaatttgaggtattagtc 38191895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 53187861 - 53187742
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  53187861 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaagg 53187762  T
Q  120 acgaatttgaggtattagtc 139  Q
    || |||||||||||||||||    
T  53187761 acaaatttgaggtattagtc 53187742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 33 - 139
Target Start/End: Original strand, 2226190 - 2226296
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggt 132  Q
    ||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||||| || |||||||||| ||||||||||||||||||||||||    
T  2226190 tttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggt 2226289  T
Q  133 attagtc 139  Q
    |||||||    
T  2226290 attagtc 2226296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 21348848 - 21348723
Alignment:
Q  14 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 113  Q
    |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||| |||||||| ||||||| || |||||||||| |||||    
T  21348848 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaat 21348749  T
Q  114 tcaaggacgaatttgaggtattagtc 139  Q
    |||||||| |||||||||||||||||    
T  21348748 tcaaggacaaatttgaggtattagtc 21348723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 54898573 - 54898437
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| ||||||| |||   ||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||||| ||  ||||    
T  54898573 actaacggagcttttggacggagagaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccga 54898474  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| |||||||||||||||||||||||||||||||    
T  54898473 ttttttaaaattcaaggacgaatttgaggtattagtc 54898437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 46310406 - 46310525
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    |||||||||||| |||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| |    
T  46310406 acggagggactggtttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaag 46310505  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  46310506 acgaatttgaggtattagtc 46310525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 46611273 - 46611392
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||| |||||||||||||||||||  |  ||||||||||||||||||    
T  46611273 acggagggactgatttgattgacattttataaattcagggactaatttgatatttcgcaaaattcagggacgaaattgacaaatttttcaaaattcaagg 46611372  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  46611373 acgaatttgaggtattagtc 46611392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 50 - 139
Target Start/End: Original strand, 44795890 - 44795979
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44795890 aaattcatggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaaggacgaatttgaggtattagtc 44795979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 19987600 - 19987695
Alignment:
Q  1 ctactaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatt 96  Q
    |||||||| ||| |||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  19987600 ctactaacagaccttttggacggagggactgatttgatggacgtgtgtaaaatttagggactaatttgatatttcgcaaaattcagggacgaaatt 19987695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 46609264 - 46609149
Alignment:
Q  24 agggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacga 123  Q
    ||||||||||||||| ||| | |   ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| ||||    
T  46609264 agggactgatttgattgacattttgtaaattcagggactaatttgatatttcacaaaattcagggacgaaattggccgatttttcaaaattcaagaacga 46609165  T
Q  124 atttgaggtattagtc 139  Q
    ||||||| ||||||||    
T  46609164 atttgagatattagtc 46609149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 53092742 - 53092623
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||||||| ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||| || |    
T  53092742 acggagggactgatttgattgacattttataaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaag 53092643  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  53092642 acgaatttgaggtattagtc 53092623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 2661880 - 2661992
Alignment:
Q  22 ggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggac 121  Q
    ||||||||||||||||| ||| | |   ||||||| ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||||||||||||    
T  2661880 ggagggactgatttgattgacattttgtaaattcatggactaatttgatatttcgcaaaattcacggacgaaattggtcgatttttcaaaattcaaggac 2661979  T
Q  122 gaatttgaggtat 134  Q
    |||||||||||||    
T  2661980 gaatttgaggtat 2661992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 51684746 - 51684610
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   |||||||||||||||||||||||| ||||||| | ||||||| | |||||||||||| ||| || || ||    
T  51684746 actaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatattttgcaaaattcagggatgaatttggctga 51684647  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  51684646 tttttgaaaattcaaggacgaatttgagatattagtc 51684610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 28626530 - 28626411
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||| |||||||||||||| |||||||||||||||||  |||||||||||||||||||||    
T  28626530 acggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaaattgaccgatttttcaaaattcaagg 28626431  T
Q  120 acgaatttgaggtattagtc 139  Q
    || | |||||||||||||||    
T  28626430 actattttgaggtattagtc 28626411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 50 - 145
Target Start/End: Complemental strand, 35903914 - 35903819
Alignment:
Q  50 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 145  Q
    ||||||||||||||||||||||||| | |||||||||||| |||||| || ||||||||||||||||||||| ||||||||||||||||| |||||    
T  35903914 aaattcagggactaatttgatattttgcaaaattcagggatgaaattggctgatttttcaaaattcaaggacaaatttgaggtattagtcgttttt 35903819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 30599937 - 30600063
Alignment:
Q  14 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 113  Q
    |||| |||||||||||   |||||| ||||||| ||||||||||||||||| | ||||||||| ||||||||||||| || || |||||||| | |||||    
T  30599937 ttttggacggagggaccattttgatcgacgtctctaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttgtaaaaat 30600036  T
Q  114 tcaaggacgaatttgaggtattagtcc 140  Q
    | |||||||||||||||||||||||||    
T  30600037 ttaaggacgaatttgaggtattagtcc 30600063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 17515446 - 17515310
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    ||||||||  ||||| ||| |||||||   |||||||||||| ||||||||||||||||||| | ||||||||| ||||||||| || ||| || ||| |    
T  17515446 actaacggtgattttggacagagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagcgatgaatttggccaa 17515347  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  17515346 tttttaaaaattcaaggaagaatttgaggtattagtc 17515310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 23293178 - 23293314
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| ||||||||||||  |||||||||||| ||||||||||| ||||||| | ||||||||| |||||||| || |||| || || ||    
T  23293178 actaacggagcttttggacggagggactattttgatggacgtttgtaaaattcatggactaaatagatatttcgcaaaattcaagggcgaatttggctga 23293277  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||| ||||||||| || |||||||||||||||||    
T  23293278 tttttcgaaattcaagaacaaatttgaggtattagtc 23293314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 7883447 - 7883328
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||  | |   ||||||||| ||||||||||||||||  |||||| |||||||||||| |||||||||||||||||||| |    
T  7883447 acggagggactgatttgattgaaattttgtaaattcaggaactaatttgatatttcacaaaatttagggacgaaattggccgatttttcaaaattcaaag 7883348  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||| ||||||||||||||    
T  7883347 acgaaattgaggtattagtc 7883328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 23291689 - 23291570
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   |||||||| |||||| | ||||||||| |||||||||||||||| || |||||||||| |||||||||||    
T  23291689 acggagggactgatttgattgacattttgtaaattcagagactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagg 23291590  T
Q  120 acgaatttgaggtattagtc 139  Q
    |||||||| |||||||||||    
T  23291589 acgaatttaaggtattagtc 23291570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 46112606 - 46112487
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||   |||||||||||||||||||||||| ||||||| | ||||||| | ||||||||   ||||| || |||||||||| |||||||||||    
T  46112606 acggagggaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcaataacgaatttggccgattttttaaaattcaagg 46112507  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  46112506 acgaatttgaggtattagtc 46112487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 43765273 - 43765139
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| || ||||||||   |||||||||||||||||||||||||  ||||| | ||||||||| ||||||| || ||||| ||  ||||    
T  43765273 actaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagaaactaaatagatatttcgcaaaattccggaacgaatttgaccga 43765174  T
Q  103 tttttcaaaattcaaggacgaatttgaggtattag 137  Q
    ||||| |||||||||||||||||||||||||||||    
T  43765173 tttttgaaaattcaaggacgaatttgaggtattag 43765139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 35905731 - 35905843
Alignment:
Q  14 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 113  Q
    |||| |||||||||||   ||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||||| ||  ||||||||| |||||    
T  35905731 ttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaat 35905830  T
Q  114 tcaaggacgaatt 126  Q
    ||||||| |||||    
T  35905831 tcaaggatgaatt 35905843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 611192 - 611311
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||| | |   |||||||||| |||| | | |||||||||||||||||||||||| || || ||||||| |||||||||||    
T  611192 acggagggactaatttgattgacattttgtaaattcaggggctaaatagctatttcgaaaaattcagggacgaatttggctgattttttaaaattcaagg 611291  T
Q  120 acgaatttgaggtattagtc 139  Q
    ||||||||||||||||||||    
T  611292 acgaatttgaggtattagtc 611311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 2378953 - 2379071
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||| ||||||| | | ||||| | |||||||||||||||||||  ||||||||| |||||||||||    
T  2378953 acggagggactgatttgattgacattttgtaaattcaaggactaaatagctattttgcaaaattcagggacgaaattgaccgattttttaaaattcaagg 2379052  T
Q  120 acgaatttgaggtattagt 138  Q
    |||||||||||||||||||    
T  2379053 acgaatttgaggtattagt 2379071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 42279632 - 42279510
Alignment:
Q  14 ttttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 113  Q
    |||| |||||||||||   |||||| ||||||||||||||||||||||||| | ||||||| | ||||||| | |||||| |  || ||||||| |||||    
T  42279632 ttttggacggagggaccattttgatagacgtctgtaaaattcagggactaaatagatattttgcaaaattctgagacgaattgagctgatttttgaaaat 42279533  T
Q  114 tcaaggacgaatttgaggtatta 136  Q
    |||| ||||||||||||||||||    
T  42279532 tcaatgacgaatttgaggtatta 42279510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 2377165 - 2377032
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  ||||||||||||| ||   ||||||||||||||||||||||||| |||||| |  || ||| | |||||||||||||||| || | | |    
T  2377165 actaacggagcttttagacggaggaaccattttgatggacgtctgtaaaattcagagactaaatatattttttgcaaaattcagggacgaatttggtcaa 2377066  T
Q  103 tttttcaaaattcaaggacgaatttgaggtatta 136  Q
    ||||| |||||||||  |||||||||||||||||    
T  2377065 tttttgaaaattcaaaaacgaatttgaggtatta 2377032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 44268100 - 44267976
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||| |||| || | | ||||||| ||||||||| || ||| || |||||||||| |||||||||||    
T  44268100 acggagggactgatttgattgacattttataaattcaaggacaaaatagctatttcgcaaaattcagagatgaatttggccgatttttgaaaattcaagg 44268001  T
Q  120 acgaatttgaggtattagtcctttt 144  Q
    |||||||||||||||||||| ||||    
T  44268000 acgaatttgaggtattagtcatttt 44267976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 23774268 - 23774162
Alignment:
Q  23 gagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacg 122  Q
    ||||||||  |||||||||||||||  ||||||||||||||| ||||||||||| | |||| ||||||||| || ||||| |  | ||||||||||||||    
T  23774268 gagggacttttttgatggacgtctgacaaattcagggactaaattgatatttcgcataattgagggacgaatttggccgactcgtgaaaattcaaggacg 23774169  T
Q  123 aatttga 129  Q
    |||||||    
T  23774168 aatttga 23774162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 30598456 - 30598337
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaattcaag 118  Q
    ||||||||||| ||||||| ||| | |   ||||||| |||| || | | ||||||| ||||||||||||| ||||||| ||||||||| ||||||||||    
T  30598456 acggagggactaatttgattgacattttgtaaattcaaggacaaaatagctatttcgcaaaattcagggac-aaatttgaccgatttttgaaaattcaag 30598358  T
Q  119 gacgaatttgaggtattagtc 139  Q
    |||||||||||||||||||||    
T  30598357 gacgaatttgaggtattagtc 30598337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 7884927 - 7884988
Alignment:
Q  78 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||||||||||| | || |||||||||| |||||||||||||||||||||||||||||||    
T  7884927 aaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 7884988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 42282443 - 42282559
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    |||||||||||||||| ||| || | |   ||||||| ||||||| | ||||||||| |||||||||  ||||| ||  | ||||||| |||||||||||    
T  42282443 acggagggactgatttaatgaacattttgtaaattcaaggactaaatagatatttcgcaaaattcagaaacgaatttgactgatttttgaaaattcaagg 42282542  T
Q  120 acgaatttgaggtatta 136  Q
    |||||||||||||||||    
T  42282543 acgaatttgaggtatta 42282559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 51686367 - 51686483
Alignment:
Q  23 gagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacg 122  Q
    ||||||||||||||||| || | |   ||||||  ||||||| |  |||||||| |||||| ||||||||| || || ||||||| |||||| |||||||    
T  51686367 gagggactgatttgatgaacattttgtaaattcgaggactaaataaatatttcgcaaaatttagggacgaatttggctgatttttgaaaatttaaggacg 51686466  T
Q  123 aatttgaggtattagtc 139  Q
    |||||||||||||||||    
T  51686467 aatttgaggtattagtc 51686483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 48829472 - 48829355
Alignment:
Q  23 gagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacg 122  Q
    |||||||||||||||||||| | |   |||| |  ||||||| | ||||||||| |||||||||| |  || || || || |||| ||||||||||||||    
T  48829472 gagggactgatttgatggacattttgtaaatccgaggactaaatagatatttcgcaaaattcaggaataaatttggctgaattttgaaaattcaaggacg 48829373  T
Q  123 aatttgaggtattagtcc 140  Q
    ||||||||||||||||||    
T  48829372 aatttgaggtattagtcc 48829355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 23888776 - 23888886
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 118  Q
    |||||||||||   |||||||||||| ||  |||||||||||||||  |||||||||| | |||| ||||||||| || |||||  | | |||||||| |    
T  23888776 gacggagggacctttttgatggacgtttgacaaattcagggactaagctgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagg 23888875  T
Q  119 gacgaatttga 129  Q
    |||||||||||    
T  23888876 gacgaatttga 23888886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 40508915 - 40509025
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 118  Q
    |||||||||||   |||||||||||||||  ||||||| ||| ||| ||||||||||| | |||| ||||||||| || |||||    | ||||||||||    
T  40508915 gacggagggacatttttgatggacgtctgacaaattcaaggattaagttgatatttcgcataattgagggacgaatttggccgacccgtgaaaattcaag 40509014  T
Q  119 gacgaatttga 129  Q
    |||||||||||    
T  40509015 gacgaatttga 40509025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 48633997 - 48633887
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 118  Q
    |||||||||||   |||||||||||||||  ||||||||||||||| ||||||||||| | |||| | ||||||| ||  ||||    | ||||||||||    
T  48633997 gacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaatttgaccgacccgtgaaaattcaag 48633898  T
Q  119 gacgaatttga 129  Q
    |||||||||||    
T  48633897 gacgaatttga 48633887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 54412519 - 54412633
Alignment:
Q  22 ggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggac 121  Q
    ||||||||||||||||| ||| | |   ||||||||| ||||| | ||||| ||| |||||||| ||||||| ||  || |||||| |||||||| ||||    
T  54412519 ggagggactgatttgattgacattttgtaaattcaggaactaaatagatatctcgcaaaattcaaggacgaatttgaccaattttttaaaattcacggac 54412618  T
Q  122 gaatttgaggtatta 136  Q
    ||||||||| |||||    
T  54412619 gaatttgagatatta 54412633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 129
Target Start/End: Original strand, 2977347 - 2977443
Alignment:
Q  33 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 129  Q
    |||||||||||| ||  ||||| ||||||| | ||||||||||| | |||| ||||| ||| || |||||||  | |||||||||||||||||||||    
T  2977347 tttgatggacgtatgacaaatttagggactgaattgatatttcgcataattaagggatgaatttggccgattcgtaaaaattcaaggacgaatttga 2977443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 25535253 - 25535317
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt 83  Q
    ||||||||||   ||||| ||||||||||| ||||||||||||||| || |||||||||||||||    
T  25535253 gacggagggatgaatttggtggacgtctgttaaattcagggactaacttaatatttcgaaaaatt 25535317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 21350575 - 21350694
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||| |||| || | | ||||||| |||||||||  ||||| || |||||||||  |||| ||| ||    
T  21350575 acggagggactgatttgattgacattttgtaaattcaaggacaaaatagctatttcgcaaaattcagtaacgaatttggccgattttaaaaaaatcacgg 21350674  T
Q  120 acgaatttgaggtattagtc 139  Q
    | ||||||||||||||||||    
T  21350675 atgaatttgaggtattagtc 21350694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 7884881 - 7884939
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggac 61  Q
    |||||||||  |||| |||||||||||   |||||||||||||||||||||||||||||    
T  7884881 actaacggaacttttggacggagggaccattttgatggacgtctgtaaaattcagggac 7884939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 23876982 - 23877044
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaa 81  Q
    ||||||||||   ||||||||||||| ||| |||||||| ||||||||||||||||| |||||    
T  23876982 gacggagggatgaatttgatggacgtttgttaaattcagagactaatttgatatttcaaaaaa 23877044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 45898352 - 45898462
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 118  Q
    |||||||||||   |||||| ||||||||  ||||||| ||||||| ||||||||||| | ||||||||||| || || | |||  | | |||||||| |    
T  45898352 gacggagggacctttttgatagacgtctgacaaattcaaggactaagttgatatttcgcataattcagggacaaagttggtcgacgtgtgaaaattcagg 45898451  T
Q  119 gacgaatttga 129  Q
    |||||||||||    
T  45898452 gacgaatttga 45898462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 46197856 - 46197766
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 93  Q
    |||||||||  |||| |||| ||||||   ||| |||||||||||||||||||||| ||||| | ||||||| | ||||||||| ||||||    
T  46197856 actaacggaacttttggacgaagggaccattttaatggacgtctgtaaaattcaggaactaaatagatattttgcaaaattcagagacgaa 46197766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 17516943 - 17517052
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||| ||| | |   ||||||| |||| || |   ||||||| |||||||| | ||||| ||  ||||||||| |||||||||||    
T  17516943 acggagggactgatttgattgacattttgtaaattcaaggacaaaataactatttcgcaaaattcatgaacgaatttgaccgatttttgaaaattcaagg 17517042  T
Q  120 acgaatttga 129  Q
    ||||||||||    
T  17517043 acgaatttga 17517052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 600805 - 600725
Alignment:
Q  59 gactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 139  Q
    |||||| | ||||||| | |||||||| | || || || | |||||||| |||||||||||| ||||||||||||||||||    
T  600805 gactaaatagatattttgtaaaattcatgaacaaatttggtcgattttttaaaattcaaggatgaatttgaggtattagtc 600725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 46114075 - 46114195
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttc-aaaattcaag 118  Q
    |||||| |||||||||||| ||| | |   |||||||  |||||| | ||||||||| |||||||| |||| || || ||||||||||  ||||||||||    
T  46114075 acggagtgactgatttgattgacattttgtaaattcaatgactaaatagatatttcgcaaaattcaaggacaaatttggccgatttttttaaaattcaag 46114174  T
Q  119 gacgaatttgaggtattagtc 139  Q
    ||  ||||||||||| |||||    
T  46114175 gataaatttgaggtagtagtc 46114195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 33113184 - 33113254
Alignment:
Q  19 gacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcaggga 89  Q
    |||||||||||   |||||||||||||||  ||||| ||||||||| ||||||||||| | |||| |||||    
T  33113184 gacggagggacctttttgatggacgtctgacaaatttagggactaagttgatatttcgcataattgaggga 33113254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 41944666 - 41944586
Alignment:
Q  49 aaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 129  Q
    ||||||||||||||| ||||||||||||  |||||  |||||||| || ||||||   | |||||||| ||||||| ||||    
T  41944666 aaaattcagggactattttgatatttcgttaaattgggggacgaatttggccgatccctgaaaattcagggacgaaattga 41944586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 1101 - 982
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1101 acggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaaatttgccgatttttcaaaattcaagg 1002  T
Q  120 acgaatttgaggtattagtc 139  Q
    || | |||||||||||||||    
T  1001 actattttgaggtattagtc 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 54228 - 54347
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||| ||||||| ||| | |   |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  54228 acggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaagg 54327  T
Q  120 acgaatttgaggtattagtc 139  Q
    || | |||||||||||||||    
T  54328 actattttgaggtattagtc 54347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 1399 - 1266
Alignment:
Q  3 actaacggacattttagacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 102  Q
    |||||||||  |||| |||||||||||   |||||||||||||||||||||||||||||||| | ||||||||  |||||||| ||||||| ||  || |    
T  1399 actaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcataaaattcatggacgaatttaaccaa 1300  T
Q  103 tttttcaaaattcaaggacgaatttgaggtatta 136  Q
    ||||| |||||||||||||| |||||||||||||    
T  1299 ttttttaaaattcaaggacggatttgaggtatta 1266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 1525 - 1650
Alignment:
Q  20 acggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 119  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||| ||| |||||   |||||||||||||||| ||  ||||||||| |||||||||||    
T  1525 acggagggactgatttgaatgacattttgtaaattcagggactaaattgctatttttcaaaattcagggacgaatttgaccgattttttaaaattcaagg 1624  T
Q  120 acgaatttgaggtattagtccttttt 145  Q
    |||||||||| ||||||||| |||||    
T  1625 acgaatttgatgtattagtctttttt 1650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 8353 - 8264
Alignment:
Q  48 taaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattag 137  Q
    ||||||||||||||||| | ||||||| | |||||||| | ||||| || ||| |||||| |||||||||||||||||||||||||||||    
T  8353 taaaattcagggactaaatagatattttgcaaaattcaagaacgaatttggccaattttttaaaattcaaggacgaatttgaggtattag 8264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 436336 - 436272
Alignment:
Q  68 gatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggt 132  Q
    ||||||||| |||||| | ||| ||| || || ||||||| |||||||||| |||||||||||||    
T  436336 gatatttcgcaaaatttatggatgaatttggctgatttttgaaaattcaagaacgaatttgaggt 436272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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