View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11385A_low_1 (Length: 658)

Name: NF11385A_low_1
Description: NF11385A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11385A_low_1
NF11385A_low_1
[»] chr2 (7 HSPs)
chr2 (97-388)||(6307098-6307377)
chr2 (496-650)||(6306688-6306842)
chr2 (338-389)||(39423894-39423942)
chr2 (338-388)||(2318890-2318937)
chr2 (338-388)||(3555251-3555298)
chr2 (338-388)||(9076447-9076494)
chr2 (338-388)||(36755468-36755515)
[»] chr4 (6 HSPs)
chr4 (500-643)||(39538896-39539039)
chr4 (338-388)||(147320-147367)
chr4 (338-388)||(18831350-18831397)
chr4 (338-388)||(18831697-18831744)
chr4 (338-388)||(46661294-46661341)
chr4 (338-388)||(51692899-51692946)
[»] scaffold0128 (1 HSPs)
scaffold0128 (499-645)||(20627-20773)
[»] chr7 (11 HSPs)
chr7 (499-634)||(33809090-33809225)
chr7 (338-388)||(2640179-2640226)
chr7 (338-388)||(48788804-48788851)
chr7 (613-650)||(44257456-44257493)
chr7 (338-388)||(5457287-5457334)
chr7 (338-388)||(13386127-13386174)
chr7 (338-388)||(24389165-24389212)
chr7 (338-388)||(27396975-27397022)
chr7 (338-388)||(28469011-28469058)
chr7 (338-388)||(28469388-28469435)
chr7 (338-388)||(45010984-45011031)
[»] chr5 (13 HSPs)
chr5 (338-388)||(16156856-16156903)
chr5 (338-388)||(20840817-20840864)
chr5 (324-389)||(5024006-5024068)
chr5 (338-388)||(5993890-5993937)
chr5 (338-388)||(6150455-6150502)
chr5 (335-389)||(11740685-11740736)
chr5 (338-388)||(14194424-14194471)
chr5 (338-388)||(16157235-16157282)
chr5 (338-388)||(18247087-18247134)
chr5 (338-388)||(20814137-20814184)
chr5 (338-388)||(20814515-20814562)
chr5 (338-388)||(20840534-20840581)
chr5 (338-388)||(21265522-21265569)
[»] chr3 (9 HSPs)
chr3 (338-388)||(42342792-42342839)
chr3 (340-389)||(46475159-46475205)
chr3 (338-388)||(9294338-9294385)
chr3 (338-388)||(33689383-33689430)
chr3 (338-388)||(33689759-33689806)
chr3 (338-388)||(40033836-40033883)
chr3 (338-388)||(40758148-40758195)
chr3 (338-388)||(41558009-41558056)
chr3 (327-389)||(53756734-53756793)
[»] chr1 (14 HSPs)
chr1 (338-388)||(41098734-41098781)
chr1 (338-388)||(183222-183269)
chr1 (338-388)||(6367563-6367610)
chr1 (338-388)||(17661853-17661900)
chr1 (338-388)||(19515820-19515867)
chr1 (338-388)||(23209707-23209754)
chr1 (338-388)||(24009576-24009623)
chr1 (338-388)||(26024424-26024471)
chr1 (338-388)||(30711707-30711754)
chr1 (338-388)||(32917640-32917687)
chr1 (338-388)||(34464450-34464497)
chr1 (337-387)||(35152711-35152758)
chr1 (338-388)||(36694283-36694330)
chr1 (338-388)||(36710384-36710431)
[»] scaffold0775 (1 HSPs)
scaffold0775 (338-389)||(4963-5011)
[»] chr8 (4 HSPs)
chr8 (338-389)||(33357499-33357547)
chr8 (338-388)||(16388584-16388631)
chr8 (330-388)||(38956052-38956107)
chr8 (338-388)||(39071677-39071724)
[»] scaffold0707 (1 HSPs)
scaffold0707 (338-388)||(6459-6506)
[»] chr6 (4 HSPs)
chr6 (338-388)||(3059636-3059683)
chr6 (338-388)||(30726139-30726186)
chr6 (338-388)||(33517914-33517961)
chr6 (338-388)||(33647331-33647378)


Alignment Details
Target: chr2 (Bit Score: 226; Significance: 1e-124; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 97 - 388
Target Start/End: Complemental strand, 6307377 - 6307098
Alignment:
Q  97 aagtacaggaaaggtaagaagttgatttctttgtctgcaattttataggtatacatgatccaagaacaaaatgagtgaaagatgtgcacgggggtttgaa 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6307377 aagtacaggaaaggtaagaagttgatttctttgtctgcaattttataggtatacatgatccaagaacaaaatgagtgaaagatgtgcacgggggtttgaa 6307278  T
Q  197 aatatgtataactttttatcattacttagccaagttcattgaactctaatgagaaacagttttgtgcggttagatattgtttacattcacatagtcaata 296  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       
T  6307277 agtatgtataactttttatcattacttagccaagttcattgaactctaatgagaaacagttttgtgcagttagatattgtttacattcacatagtca--- 6307181  T
Q  297 agtcaataaattggcggagcagttcaaatatttttaaattagcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
         ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    |||| ||||||| ||||||||||||||||    
T  6307180 -----ataaattggcggagcagttcaaatatttttaaattggcttaaatatgtatttca----tcttgcaattagtggtcgtttaaaaattg 6307098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 496 - 650
Target Start/End: Complemental strand, 6306842 - 6306688
Alignment:
Q  496 aaccgaagcaaactcattcagtatcacttctcgacctgaagaatccgtagctaattcaaatccttctttcacggacaacgtcgccaccaaagatattcac 595  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||  ||||||||||||||||||||||    
T  6306842 aaccgaagcaaactcattcagtatcacttctcgacctgaagaatccgtcgctaattcaaatccttctttcaccgacggcgtcgccaccaaagatattcac 6306743  T
Q  596 atcgatcctttcaccctggtttagcttcttgttaattatgtcatgtgttcatctc 650  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  6306742 atcgatcctttcaccctggtttagcttcttattaattatgtcatgtgttcttctc 6306688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 389
Target Start/End: Complemental strand, 39423942 - 39423894
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattga 389  Q
    |||||||||||||||||||    ||| |||||||||||||||||||||||||    
T  39423942 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattga 39423894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 2318937 - 2318890
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||  |||   ||||||||||||||||||||||||    
T  2318937 gcttaaatatgtatttcatccttc---caattaggggtcgtttaaaaattg 2318890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 3555251 - 3555298
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  3555251 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 3555298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 9076494 - 9076447
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||| ||   |||| ||||||||||||||||||||||||    
T  9076494 gcttaaatatgtattttat---tcttgcaattaggggtcgtttaaaaattg 9076447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 36755515 - 36755468
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  36755515 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 36755468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 4e-49; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 500 - 643
Target Start/End: Complemental strand, 39539039 - 39538896
Alignment:
Q  500 gaagcaaactcattcagtatcacttctcgacctgaagaatccgtagctaattcaaatccttctttcacggacaacgtcgccaccaaagatattcacatcg 599  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||||| |||  ||| ||||||||||||||||||||||    
T  39539039 gaagcaaactcattcggtatcacttctccacccgaagaatccgtcgctaattcaaatccttctttcaccgacggcgttgccaccaaagatattcacatcg 39538940  T
Q  600 atcctttcaccctggtttagcttcttgttaattatgtcatgtgt 643  Q
    |||||||||||  ||||||||||||||||||||| |||||||||    
T  39538939 atcctttcacctgggtttagcttcttgttaattacgtcatgtgt 39538896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 147320 - 147367
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    | ||||||||||||||||||||||||||    
T  147320 gcttaaatatgtatttcatc---cctacaattaggggtcgtttaaaaattg 147367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 18831350 - 18831397
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||| ||    ||||||||||||||||||||||||||||    
T  18831350 gcttaaatatgtatttgatc---cttacaattaggggtcgtttaaaaattg 18831397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 18831744 - 18831697
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  18831744 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 18831697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 46661341 - 46661294
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  46661341 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 46661294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 51692946 - 51692899
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  51692946 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 51692899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 99; Significance: 2e-48; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 499 - 645
Target Start/End: Complemental strand, 20773 - 20627
Alignment:
Q  499 cgaagcaaactcattcagtatcacttctcgacctgaagaatccgtagctaattcaaatccttctttcacggacaacgtcgccaccaaagatattcacatc 598  Q
    |||||||||||||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||||| |||| | |||||||||||||||||||||||    
T  20773 cgaagcaaactcattcggtatcacttctccacccgaagaatccgtcgctaattcaaatccttctttcaccgacagcatcgccaccaaagatattcacatc 20674  T
Q  599 gatcctttcaccctggtttagcttcttgttaattatgtcatgtgttc 645  Q
    ||||||||| |   | |||||||||||||||||||||||||||||||    
T  20673 gatcctttcgcttggatttagcttcttgttaattatgtcatgtgttc 20627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 6e-42; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 499 - 634
Target Start/End: Complemental strand, 33809225 - 33809090
Alignment:
Q  499 cgaagcaaactcattcagtatcacttctcgacctgaagaatccgtagctaattcaaatccttctttcacggacaacgtcgccaccaaagatattcacatc 598  Q
    |||||||||||||||| |||||||||||||||| || |||| ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||    
T  33809225 cgaagcaaactcattcggtatcacttctcgacccgatgaatgcgtcgctaattcaaatccttctttcaccgacggcgtcgccacaaaagatattcacatc 33809126  T
Q  599 gatcctttcaccctggtttagcttcttgttaattat 634  Q
    |||||||| |||  ||||||||||||||||||||||    
T  33809125 gatcctttgacctgggtttagcttcttgttaattat 33809090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 2640179 - 2640226
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||||||||||||||||||||||||||||    
T  2640179 gcttaaatatgtatttcatc---cttacaattaggggtcgtttaaaaattg 2640226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 48788804 - 48788851
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||   |||| ||||||||||||||||||||||||    
T  48788804 gcttaaatatgtatttcat---tcttgcaattaggggtcgtttaaaaattg 48788851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 613 - 650
Target Start/End: Original strand, 44257456 - 44257493
Alignment:
Q  613 ggtttagcttcttgttaattatgtcatgtgttcatctc 650  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  44257456 ggtttagcttcttattaattatgtcatgtgttcttctc 44257493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 5457334 - 5457287
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  5457334 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 5457287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 13386174 - 13386127
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||| |||   ||| ||||||||||||||||||||||||    
T  13386174 gcttaaatatgtatttaata---cttgcaattaggggtcgtttaaaaattg 13386127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 24389212 - 24389165
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  24389212 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 24389165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 27397022 - 27396975
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  27397022 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 27396975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 28469011 - 28469058
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  28469011 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 28469058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 28469435 - 28469388
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  28469435 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 28469388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 45011031 - 45010984
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  45011031 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 45010984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000004; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 16156856 - 16156903
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    ||||||||||||||||||||   ||| ||||||||||||||||||||||||    
T  16156856 gcttaaatatgtatttcata---cttgcaattaggggtcgtttaaaaattg 16156903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 20840864 - 20840817
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||||||||||||||||||||||||||||    
T  20840864 gcttaaatatgtatttcatc---cttacaattaggggtcgtttaaaaattg 20840817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 389
Target Start/End: Original strand, 5024006 - 5024068
Alignment:
Q  324 atatttttaaattagcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattga 389  Q
    |||||||||  || |||||||||||||||||||    ||| |||||||||||||||||||||||||    
T  5024006 atatttttatcttggcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattga 5024068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 5993890 - 5993937
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  5993890 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 5993937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 6150455 - 6150502
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  6150455 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 6150502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 11740685 - 11740736
Alignment:
Q  335 ttagcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattga 389  Q
    |||| |||||||||||||||||    ||| |||||||||||||||||||||||||    
T  11740685 ttagtttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattga 11740736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 14194424 - 14194471
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  14194424 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 14194471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 16157282 - 16157235
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  16157282 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 16157235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 18247087 - 18247134
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  18247087 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 18247134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 20814137 - 20814184
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||||||||||| ||||||||||||||||    
T  20814137 gcttaaatatgtatttcatc---cttacaattagaggtcgtttaaaaattg 20814184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 20814562 - 20814515
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  20814562 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 20814515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 20840534 - 20840581
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  20840534 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 20840581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 21265569 - 21265522
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    |||||||||| |||||||||||||||||    
T  21265569 gcttaaatatgtatttcatc---cttacaattaagggtcgtttaaaaattg 21265522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000004; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 42342792 - 42342839
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||||||||||||||||||||||||||||    
T  42342792 gcttaaatatgtatttcatc---cttacaattaggggtcgtttaaaaattg 42342839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 46475205 - 46475159
Alignment:
Q  340 ttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattga 389  Q
    |||||||||||||||||    |||||||||||||||||||||||||||||    
T  46475205 ttaaatatgtatttcatc---cttacaattaggggtcgtttaaaaattga 46475159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 9294385 - 9294338
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  9294385 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 9294338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 33689383 - 33689430
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  33689383 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 33689430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 33689806 - 33689759
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    ||||||||||||||||||| |||    ||||||||||||||||||||||||    
T  33689806 gcttaaatatgtatttcatctttg---caattaggggtcgtttaaaaattg 33689759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 40033883 - 40033836
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  40033883 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 40033836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 40758148 - 40758195
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  40758148 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 40758195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 41558009 - 41558056
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||   |||| |||||| |||||||||||||||||    
T  41558009 gcttaaatatgtatttcat---tcttgcaattatgggtcgtttaaaaattg 41558056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 53756734 - 53756793
Alignment:
Q  327 tttttaaattagcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattga 389  Q
    ||||| |||| | ||||||||||||||||| |||    |||||||||||||||||||||||||    
T  53756734 ttttttaatttgtttaaatatgtatttcatctttg---caattaggggtcgtttaaaaattga 53756793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000004; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 41098734 - 41098781
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||   |||| ||||||||||||||||||||||||    
T  41098734 gcttaaatatgtatttcat---tcttgcaattaggggtcgtttaaaaattg 41098781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 183222 - 183269
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||| ||    ||||||||||||||||||||||||||||    
T  183222 gcttaaatatgtatttgatc---cttacaattaggggtcgtttaaaaattg 183269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 6367563 - 6367610
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  6367563 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 6367610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 17661853 - 17661900
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  17661853 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 17661900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 19515820 - 19515867
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  19515820 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 19515867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 23209754 - 23209707
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  23209754 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 23209707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 24009576 - 24009623
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  24009576 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 24009623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 26024424 - 26024471
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||| ||   |||| ||||||||||||||||||||||||    
T  26024424 gcttaaatatgtatttgat---tcttgcaattaggggtcgtttaaaaattg 26024471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 30711754 - 30711707
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  30711754 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 30711707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 32917687 - 32917640
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||   |||| |||||| |||||||||||||||||    
T  32917687 gcttaaatatgtatttcat---tcttgcaattaagggtcgtttaaaaattg 32917640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 34464450 - 34464497
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  34464450 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 34464497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 337 - 387
Target Start/End: Complemental strand, 35152758 - 35152711
Alignment:
Q  337 agcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaatt 387  Q
    ||||||||||||||||||||    ||| |||||||||||||||||||||||    
T  35152758 agcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaatt 35152711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 36694283 - 36694330
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  36694283 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 36694330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 36710384 - 36710431
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  36710384 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 36710431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 389
Target Start/End: Original strand, 4963 - 5011
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattga 389  Q
    |||||||||||||||||||    | |||||||||||||||||||||||||||    
T  4963 gcttaaatatgtatttcatc---cctacaattaggggtcgtttaaaaattga 5011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 30; Significance: 0.0000002; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 389
Target Start/End: Original strand, 33357499 - 33357547
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattga 389  Q
    |||||||||||||||||||    ||| |||||||||||||||||||||||||    
T  33357499 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattga 33357547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 16388584 - 16388631
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  16388584 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 16388631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 388
Target Start/End: Complemental strand, 38956107 - 38956052
Alignment:
Q  330 ttaaattagcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    ||||||| |||||||||||||||| ||    ||| ||||||||||||||||||||||||    
T  38956107 ttaaattggcttaaatatgtatttgatc---cttgcaattaggggtcgtttaaaaattg 38956052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 39071677 - 39071724
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  39071677 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 39071724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 6506 - 6459
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  6506 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 6459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 29; Significance: 0.0000009; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 3059683 - 3059636
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  3059683 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 3059636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 30726186 - 30726139
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  30726186 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 30726139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 33517961 - 33517914
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  33517961 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 33517914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 33647378 - 33647331
Alignment:
Q  338 gcttaaatatgtatttcatatttcttacaattaggggtcgtttaaaaattg 388  Q
    |||||||||||||||||||    ||| ||||||||||||||||||||||||    
T  33647378 gcttaaatatgtatttcatc---cttgcaattaggggtcgtttaaaaattg 33647331  T

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