View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11385A_low_103 (Length: 308)
Name: NF11385A_low_103
Description: NF11385A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11385A_low_103 |
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Alignment Details
Target: chr4 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 10 - 306
Target Start/End: Original strand, 53308914 - 53309210
Alignment:
| Q |
10 |
aatatcataggtgcatcatcttcaactagttcttcatctttggctaatttttatgccagtaataatnnnnnnnccaagtacaacaaacttcaaacactct |
109 |
Q |
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| T |
53308914 |
aatatcataggtgcatcatcttcaactagttcttcatctttggctaatttctatgccagtaataataaaaaaaccaagtacaacaaacttcaaacactct |
53309013 |
T |
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| Q |
110 |
cacatgggcttgagctggatgatgatcttgtctctagtagtgtagttcctgctgtgacagttgtgttggagggccgttcgatctgccaacgcatcagcct |
209 |
Q |
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| T |
53309014 |
cacatgggcttgagctggatgatgatcttgtctctagtagtgtagttcctgctgtgacagttgtgttggagggccgttcgatctgccaacgcatcagcct |
53309113 |
T |
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| Q |
210 |
tcacaaccacggtagctaccaaagtctggccaaggctctccgccagatgtttgtcgattgcacggatgactgcgacgccggtgatcatcatcttgat |
306 |
Q |
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| T |
53309114 |
tcacaaccacggtagctaccaaagtctggccaaggctctccgccagatgtttgtcgattgcacggatgactgcgacgccggtgatcatcatcttgat |
53309210 |
T |
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