View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11385A_low_128 (Length: 286)
Name: NF11385A_low_128
Description: NF11385A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11385A_low_128 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 24 - 286
Target Start/End: Complemental strand, 16708055 - 16707793
Alignment:
| Q |
24 |
aggaggccacatgaatattcataggaaagaaagaacaacttataaggccaaacaaggcacacccaattcctcaccttttgttccagcagttgtttcaagc |
123 |
Q |
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| T |
16708055 |
aggaggccacatgaatattcataggaaagaaagaacaacttataaggccaaacaaggcacacccaattcctcaccttttgttccagcagttgtttcaagc |
16707956 |
T |
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| Q |
124 |
caaccttcaacttattactgcattttagagcctcctaggaactatgaaatgtatcatcaaacatcaaaaacaaaccctagaaactctccacctacatttc |
223 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16707955 |
caaccttcaacttattactgcattttagagcctcctaggaactatgacatgtatcatcaaacatcaaaaacaaaccctagaaactctccacctacatttc |
16707856 |
T |
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| Q |
224 |
aatatgattttcttaacacaagctctcaatctttgttgggaaccaatttgagtctccaaattg |
286 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16707855 |
aatatgattttcttaacacaagctctcaatctttgttgggaaccaatttgagtctccaaattg |
16707793 |
T |
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