View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11385A_low_161 (Length: 263)
Name: NF11385A_low_161
Description: NF11385A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11385A_low_161 |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 5 - 251
Target Start/End: Complemental strand, 26505547 - 26505301
Alignment:
| Q |
5 |
caataatgtgatgtgttgttacttttgcgtgaggcaacaaacttaggtttaacaaattcgtacgatatatccgatcttacgtcctctgccagcgtctcta |
104 |
Q |
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| T |
26505547 |
caataatgtgatgtgttgttacttttgcgtgaggcaacaaacttaggtttaacaaattcgtacgatatatacgatcttacgtcctctgccagcgtctctg |
26505448 |
T |
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| Q |
105 |
taccactatactatacttgtaggacccaccaccacgtatggctgaattgccaagccaaagtcttatgcatggctgaattttcttccctgtacagtgaagc |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
26505447 |
taccactatactatacttgtaggacccaccaccacgtatggctgaattgccaagccaaagtcttatgcatggctgaattttcttccatgtacagtgaagc |
26505348 |
T |
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| Q |
205 |
ttttgtgtaacttgaggtgcagagacacaacttgtggtgctgatatt |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26505347 |
ttttgtgtaacttgaggtgcagagacacaacttgtggtgctgatatt |
26505301 |
T |
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