View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11385A_low_170 (Length: 258)

Name: NF11385A_low_170
Description: NF11385A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11385A_low_170
NF11385A_low_170
[»] chr1 (33 HSPs)
chr1 (148-257)||(7342447-7342556)
chr1 (9-85)||(7342620-7342697)
chr1 (9-85)||(9172386-9172463)
chr1 (9-85)||(9180368-9180445)
chr1 (9-85)||(25406390-25406467)
chr1 (9-85)||(51868751-51868828)
chr1 (9-73)||(9919300-9919364)
chr1 (16-85)||(51871762-51871832)
chr1 (9-82)||(19716003-19716076)
chr1 (9-85)||(25728065-25728142)
chr1 (9-85)||(28035037-28035114)
chr1 (9-84)||(38520639-38520715)
chr1 (8-85)||(5324662-5324740)
chr1 (1-85)||(14545418-14545504)
chr1 (32-85)||(30818474-30818528)
chr1 (9-81)||(27872641-27872714)
chr1 (10-70)||(18569417-18569477)
chr1 (9-84)||(35584727-35584803)
chr1 (9-71)||(30878988-30879050)
chr1 (9-62)||(34519055-34519108)
chr1 (9-70)||(40646602-40646663)
chr1 (9-70)||(40881119-40881180)
chr1 (9-85)||(50272246-50272323)
chr1 (1-81)||(11453837-11453920)
chr1 (16-79)||(20266206-20266270)
chr1 (9-68)||(45426168-45426227)
chr1 (28-82)||(45805934-45805989)
chr1 (9-71)||(7312204-7312266)
chr1 (9-85)||(33291524-33291602)
chr1 (1-62)||(44637344-44637406)
chr1 (32-72)||(30558783-30558823)
chr1 (9-73)||(50166205-50166269)
chr1 (148-184)||(51871663-51871699)
[»] chr5 (24 HSPs)
chr5 (9-85)||(7150441-7150518)
chr5 (9-85)||(27266966-27267043)
chr5 (9-73)||(7241692-7241756)
chr5 (9-73)||(7246868-7246932)
chr5 (1-84)||(43261915-43261999)
chr5 (32-85)||(16981187-16981241)
chr5 (9-85)||(10649350-10649427)
chr5 (9-85)||(30371621-30371698)
chr5 (1-85)||(781286-781372)
chr5 (9-82)||(18677572-18677646)
chr5 (28-85)||(19281069-19281127)
chr5 (9-85)||(2057944-2058021)
chr5 (9-85)||(26578146-26578223)
chr5 (7-70)||(1582225-1582288)
chr5 (7-70)||(1602527-1602590)
chr5 (9-70)||(11767720-11767782)
chr5 (9-82)||(21060387-21060461)
chr5 (16-85)||(34881607-34881676)
chr5 (9-85)||(7887043-7887120)
chr5 (9-62)||(20257800-20257853)
chr5 (9-62)||(19259918-19259972)
chr5 (1-85)||(36344586-36344672)
chr5 (9-61)||(30298130-30298182)
chr5 (32-79)||(42432803-42432851)
[»] chr3 (26 HSPs)
chr3 (9-85)||(3850561-3850638)
chr3 (16-85)||(21488003-21488073)
chr3 (1-85)||(29503354-29503440)
chr3 (10-81)||(22802917-22802990)
chr3 (9-85)||(38440683-38440760)
chr3 (9-85)||(39917502-39917579)
chr3 (9-84)||(35499307-35499384)
chr3 (9-74)||(2342395-2342460)
chr3 (9-70)||(4172474-4172535)
chr3 (9-85)||(14464399-14464476)
chr3 (9-81)||(25162332-25162404)
chr3 (9-85)||(25631633-25631710)
chr3 (9-85)||(42719412-42719489)
chr3 (9-85)||(44907505-44907582)
chr3 (9-85)||(46934534-46934611)
chr3 (9-85)||(32607360-32607436)
chr3 (42-85)||(51202388-51202432)
chr3 (32-85)||(4178456-4178510)
chr3 (9-85)||(46178468-46178546)
chr3 (9-85)||(36906013-36906090)
chr3 (16-73)||(38855150-38855207)
chr3 (9-85)||(50611523-50611600)
chr3 (32-85)||(49552352-49552406)
chr3 (1-70)||(54378808-54378878)
chr3 (9-85)||(12115985-12116062)
chr3 (9-70)||(17237710-17237771)
[»] chr2 (26 HSPs)
chr2 (9-85)||(20047188-20047264)
chr2 (1-85)||(2808568-2808653)
chr2 (9-85)||(6173530-6173607)
chr2 (9-85)||(32680688-32680765)
chr2 (1-82)||(41430929-41431013)
chr2 (9-85)||(45128102-45128179)
chr2 (9-85)||(27249257-27249334)
chr2 (9-85)||(30420575-30420652)
chr2 (16-85)||(21570521-21570591)
chr2 (16-85)||(36233903-36233973)
chr2 (1-85)||(40626124-40626210)
chr2 (1-61)||(22421659-22421720)
chr2 (1-82)||(26025506-26025590)
chr2 (16-72)||(31581832-31581888)
chr2 (16-70)||(34598902-34598956)
chr2 (9-85)||(4228030-4228107)
chr2 (1-85)||(8971723-8971811)
chr2 (18-62)||(18694970-18695014)
chr2 (9-85)||(27949322-27949398)
chr2 (17-72)||(3725093-3725148)
chr2 (32-85)||(4192737-4192791)
chr2 (1-70)||(8805781-8805851)
chr2 (16-81)||(27477057-27477123)
chr2 (9-81)||(42949616-42949690)
chr2 (9-85)||(3270334-3270411)
chr2 (9-70)||(39641965-39642026)
[»] chr7 (19 HSPs)
chr7 (1-85)||(23425468-23425554)
chr7 (9-79)||(35667337-35667408)
chr7 (16-85)||(1485369-1485439)
chr7 (1-85)||(20116477-20116563)
chr7 (1-85)||(48207796-48207882)
chr7 (1-85)||(433788-433875)
chr7 (1-85)||(22927966-22928053)
chr7 (3-85)||(2843327-2843410)
chr7 (16-85)||(46821908-46821978)
chr7 (5-81)||(21266290-21266367)
chr7 (5-70)||(32684595-32684660)
chr7 (9-85)||(42311174-42311251)
chr7 (9-73)||(23085428-23085492)
chr7 (1-85)||(26492259-26492346)
chr7 (10-73)||(31235898-31235962)
chr7 (32-85)||(26583608-26583662)
chr7 (9-70)||(35496281-35496342)
chr7 (9-70)||(36143776-36143837)
chr7 (16-69)||(1448942-1448995)
[»] scaffold0495 (1 HSPs)
scaffold0495 (9-85)||(5292-5369)
[»] chr6 (18 HSPs)
chr6 (9-85)||(10228573-10228650)
chr6 (9-84)||(16419053-16419129)
chr6 (16-85)||(12652834-12652904)
chr6 (9-85)||(8496859-8496936)
chr6 (9-85)||(23947423-23947500)
chr6 (9-85)||(25064129-25064206)
chr6 (9-62)||(35001508-35001561)
chr6 (9-85)||(8196513-8196590)
chr6 (9-85)||(33740684-33740761)
chr6 (16-85)||(7876158-7876228)
chr6 (1-81)||(17237381-17237463)
chr6 (1-70)||(33109744-33109814)
chr6 (1-73)||(4468466-4468539)
chr6 (9-69)||(8028224-8028284)
chr6 (9-85)||(28635226-28635305)
chr6 (16-70)||(7881216-7881270)
chr6 (9-82)||(17334672-17334746)
chr6 (9-85)||(12165735-12165812)
[»] chr4 (33 HSPs)
chr4 (9-85)||(10389859-10389936)
chr4 (9-85)||(56194505-56194582)
chr4 (9-82)||(6972718-6972792)
chr4 (1-70)||(8009457-8009526)
chr4 (9-85)||(9645655-9645732)
chr4 (9-85)||(34024542-34024619)
chr4 (9-84)||(35965080-35965157)
chr4 (9-85)||(51317892-51317969)
chr4 (9-84)||(9283818-9283894)
chr4 (27-81)||(5333655-5333709)
chr4 (9-85)||(9528984-9529061)
chr4 (1-85)||(37188690-37188775)
chr4 (9-81)||(47416794-47416867)
chr4 (9-85)||(53616757-53616834)
chr4 (9-84)||(20569159-20569235)
chr4 (17-81)||(27593952-27594016)
chr4 (9-79)||(38706816-38706887)
chr4 (32-85)||(4643762-4643818)
chr4 (9-82)||(43444302-43444376)
chr4 (9-82)||(50766615-50766689)
chr4 (9-85)||(10359652-10359729)
chr4 (10-85)||(12265361-12265438)
chr4 (9-81)||(43154127-43154199)
chr4 (9-61)||(25273811-25273863)
chr4 (16-85)||(1531812-1531883)
chr4 (27-85)||(5333583-5333642)
chr4 (27-85)||(18139037-18139096)
chr4 (27-85)||(49126250-49126309)
chr4 (9-82)||(21090062-21090136)
chr4 (1-85)||(31381768-31381854)
chr4 (9-70)||(2115694-2115755)
chr4 (1-70)||(32952844-32952913)
chr4 (9-61)||(29965565-29965617)
[»] chr8 (20 HSPs)
chr8 (9-73)||(33895995-33896059)
chr8 (16-85)||(14907037-14907107)
chr8 (32-85)||(42448157-42448211)
chr8 (33-85)||(28239734-28239787)
chr8 (19-85)||(9619474-9619541)
chr8 (16-85)||(2655770-2655840)
chr8 (28-81)||(9072622-9072676)
chr8 (1-81)||(16794198-16794280)
chr8 (1-85)||(44100029-44100115)
chr8 (9-85)||(11725583-11725660)
chr8 (17-85)||(17949148-17949217)
chr8 (9-85)||(34611705-34611782)
chr8 (9-70)||(35580375-35580436)
chr8 (9-85)||(44577937-44578014)
chr8 (9-84)||(9498708-9498784)
chr8 (9-61)||(43192451-43192503)
chr8 (35-81)||(29777134-29777181)
chr8 (9-85)||(11196793-11196868)
chr8 (16-85)||(32724602-32724671)
chr8 (32-68)||(25241731-25241767)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-81)||(8618-8700)
[»] scaffold0146 (1 HSPs)
scaffold0146 (9-70)||(16428-16489)


Alignment Details
Target: chr1 (Bit Score: 94; Significance: 6e-46; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 148 - 257
Target Start/End: Complemental strand, 7342556 - 7342447
Alignment:
Q  148 ttagggccgacttattggagagggagagtaagagtatgatatattgcctcatttaattacttttagttaaacaaaattgattcaactgacatttatatat 247  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7342556 ttagggccggcttattggagagggagaggaagagtatgatatattgcctcatttaattacttttagttaaacaaaattgattcaactgacatttatatat 7342457  T
Q  248 tcttcgagat 257  Q
    | || |||||    
T  7342456 ttttggagat 7342447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 7342697 - 7342620
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||| |||||||||||||||    
T  7342697 aaaaacatagatctacgtaaaagtcacttatttagattgaaatagataaaaaaatatgaagaggggtgatttcaggtc 7342620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 9172463 - 9172386
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||    
T  9172463 aaaaacctagatctatgtgaaagtcacttatttagattgaaatagagaaaaaaatatgaagaggggtgatttcaggtc 9172386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 9180445 - 9180368
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||    
T  9180445 aaaaacctagatctatgtgaaagtcacttatttagattgaaatagagaaaaaaatatgaagaggggtgatttcaggtc 9180368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 25406390 - 25406467
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagagg-gtgatttcaggtc 85  Q
    |||||| |||||||| || ||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||    
T  25406390 aaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggtgtgatttcaggtc 25406467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 51868751 - 51868828
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||    
T  51868751 aaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtc 51868828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 9919364 - 9919300
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagaggg 73  Q
    ||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  9919364 aaaaacatagatctatgtaaaaatcacttatttagattgaaatagagagaaaaagatgaagaggg 9919300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 51871832 - 51871762
Alignment:
Q  16 tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||||| || ||||||||||||| ||||||||||||||||||||| ||||||| ||||||||| |||||    
T  51871832 tagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgattttaggtc 51871762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 19716003 - 19716076
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagagggtgatttcag 82  Q
    |||||| || ||||| || ||| ||||||||| ||||||||||| ||||||||| |||||||||||||||||||    
T  19716003 aaaaacctaaatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagggtgatttcag 19716076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 25728065 - 25728142
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagagg-gtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||| ||||||||| ||||||||| |||||||||||||    
T  25728065 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggagtgatttcaggtc 25728142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 28035114 - 28035037
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||||||||||||| ||||||| | |||||||||||||    
T  28035114 aaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatgagtgatttcaggtc 28035037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 38520639 - 38520715
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggt 84  Q
    ||||||||||||||| || ||| ||||||||| |||| |||||||||||||||| ||||||| | ||||||||||||    
T  38520639 aaaaacatagatctatgtgaaaatcacttatttagatcgaaatagagagaaaaagatgaagatgagtgatttcaggt 38520715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 5324662 - 5324740
Alignment:
Q  8 gaaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagag-ggtgatttcaggtc 85  Q
    ||||||| || || ||||| ||| ||||||||| ||||||||||||||||||||| |||||||| ||||||| ||||||    
T  5324662 gaaaaacttaaatttacgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagagaggtgattccaggtc 5324740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 14545504 - 14545418
Alignment:
Q  1 tcacaaagaaaaa-catagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||||||| | |||||||| || ||| ||||||||| ||||||||||| ||||||||| ||||||| | |||||||||||||    
T  14545504 tcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagatgagtgatttcaggtc 14545418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 30818474 - 30818528
Alignment:
Q  32 tcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||    
T  30818474 tcacttatttagattgaaatagagagaaaaagatgaagatgggtgatttcaggtc 30818528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 27872714 - 27872641
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttca 81  Q
    |||||| |||||||| || ||| ||||||||| |||||||||||||| |||||| ||||||| |||||||||||    
T  27872714 aaaaacttagatctatgtgaaaatcacttatttagattgaaatagagcgaaaaagatgaagatgggtgatttca 27872641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 18569417 - 18569477
Alignment:
Q  10 aaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    ||||| |||||||| || ||| ||||||||| ||||||||||||||||||||| |||||||    
T  18569417 aaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga 18569477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 35584727 - 35584803
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggt 84  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||| ||||||||| ||||||| | ||||||||||||    
T  35584727 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgagtgatttcaggt 35584803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 30879050 - 30878988
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagag 71  Q
    ||||||||||||||| || ||| ||||||||| ||||| ||||| ||||||||| ||||||||    
T  30879050 aaaaacatagatctatgtgaaaatcacttatttagattaaaataaagagaaaaagatgaagag 30878988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 34519108 - 34519055
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaa 62  Q
    |||||| |||||||| || ||| ||||||||| |||||||||||||||||||||    
T  34519108 aaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaa 34519055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 40646663 - 40646602
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    |||||| ||||||||||| ||| ||||||||| ||||||||||| | ||||||| |||||||    
T  40646663 aaaaacctagatctacgtgaaaatcacttatttagattgaaataaatagaaaaagatgaaga 40646602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 40881119 - 40881180
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    |||||| |||||||| || ||| ||||| ||| ||||||||||||||||||||| |||||||    
T  40881119 aaaaacctagatctaagtgaaaatcactcatttagattgaaatagagagaaaaagatgaaga 40881180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 50272246 - 50272323
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| | ||||||| ||||||||||| ||||||||| ||||| | |||||||||||||||    
T  50272246 aaaaacttagatctatgtgaaaattacttatttagattgaaataaagagaaaaagatgaataggggtgatttcaggtc 50272323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 11453920 - 11453837
Alignment:
Q  1 tcacaaagaaaaa-catagatctacgtaaaagtcacttattgagattgaaataga--gagaaaaatatgaagagggtgatttca 81  Q
    ||||||||||||| | |||||||| || |||  |||||||| |||||||||||||  |||||||| |||||||| |||||||||    
T  11453920 tcacaaagaaaaaacctagatctatgtgaaaaccacttatttagattgaaatagagagagaaaaagatgaagagagtgatttca 11453837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 20266270 - 20266206
Alignment:
Q  16 tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgattt 79  Q
    |||||||| || ||| ||||||||| ||||||||||| ||||||||| ||||||| |||||||||    
T  20266270 tagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgattt 20266206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 45426168 - 45426227
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaa 68  Q
    |||||| |||||||| || ||| ||||||||| ||||| ||||||||||||||| |||||    
T  45426168 aaaaacttagatctatgtgaaaatcacttatttagatttaaatagagagaaaaagatgaa 45426227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 45805934 - 45805989
Alignment:
Q  28 aaagtcacttattgagattgaaatagagagaaaaatatgaag-agggtgatttcag 82  Q
    ||||||||||||| ||||||||||||||||||||| | |||| | |||||||||||    
T  45805934 aaagtcacttatttagattgaaatagagagaaaaagaggaagaaaggtgatttcag 45805989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 7312204 - 7312266
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagag 71  Q
    |||||| ||||||||||| ||| ||| ||||| |  |||||||||||||||||| ||||||||    
T  7312204 aaaaacctagatctacgtgaaaatcatttatttaatttgaaatagagagaaaaagatgaagag 7312266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 33291524 - 33291602
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagag-aaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||||||||| || || ||| ||||||||| | ||||||||||| || ||||| ||||||| |||||||||||||||    
T  33291524 aaaaacatagatttatgtgaaaatcacttatttatattgaaatagaaagaaaaaaaatgaagaggggtgatttcaggtc 33291602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44637406 - 44637344
Alignment:
Q  1 tcacaaagaa-aaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaa 62  Q
    |||||||||| |||| ||||||||||| ||| ||||||||| ||||||||||| ||| |||||    
T  44637406 tcacaaagaagaaacttagatctacgtgaaaatcacttatttagattgaaataaagataaaaa 44637344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 30558783 - 30558823
Alignment:
Q  32 tcacttattgagattgaaatagagagaaaaatatgaagagg 72  Q
    |||||| || ||||||||||||| |||||||||||||||||    
T  30558783 tcacttttttagattgaaatagaaagaaaaatatgaagagg 30558823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 50166205 - 50166269
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagaggg 73  Q
    |||||| || ||||| || ||| ||||||||| ||||||||||||| ||||||| || |||||||    
T  50166205 aaaaacctaaatctatgtgaaattcacttatttagattgaaatagatagaaaaagataaagaggg 50166269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 51871699 - 51871663
Alignment:
Q  148 ttagggccgacttattggagagggagagtaagagtat 184  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  51871699 ttagggccgacttgttggagagggagaggaagagtat 51871663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 7150441 - 7150518
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||    
T  7150441 aaaaacttagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtc 7150518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 27266966 - 27267043
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  27266966 aaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaatatgaagaggggtgatttcaggtc 27267043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 7241756 - 7241692
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagaggg 73  Q
    |||||| |||||||| || ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  7241756 aaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggg 7241692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 7246932 - 7246868
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagaggg 73  Q
    |||||| |||||||| || ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  7246932 aaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggg 7246868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 43261915 - 43261999
Alignment:
Q  1 tcacaaagaaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggt 84  Q
    |||||||| ||||| |||||||| || ||| ||||||||| ||||||||||||||| ||||| ||||||| ||||||||||||||    
T  43261915 tcacaaaggaaaacctagatctatgtgaaaatcacttatttagattgaaatagagataaaaagatgaagatgggtgatttcaggt 43261999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 16981241 - 16981187
Alignment:
Q  32 tcacttattgagattgaaatagagagaaaaatatgaagagg-gtgatttcaggtc 85  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  16981241 tcacttatttagattgaaatagagagaaaaatatgaagaggagtgatttcaggtc 16981187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 10649427 - 10649350
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||    
T  10649427 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtc 10649350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 30371698 - 30371621
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||    
T  30371698 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtc 30371621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 781372 - 781286
Alignment:
Q  1 tcacaaagaaaaaca-tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||||||||  ||||||||  | ||| ||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||    
T  781372 tcacaaagaaaaaccctagatctatctgaaaatcacttatttagattgaaatatagagaaaaagatgaagatgggtgatttcaggtc 781286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 18677572 - 18677646
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagaggg-tgatttcag 82  Q
    |||||| |||||||| || ||| ||||||||| ||||| ||||||||||||||| |||||||||| |||||||||    
T  18677572 aaaaacctagatctatgtgaaaatcacttatttagattaaaatagagagaaaaagatgaagagggatgatttcag 18677646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 19281069 - 19281127
Alignment:
Q  28 aaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| ||||    
T  19281069 aaagtcacttatttagattgaaatagagagaaaaagatgaagatgggtgatttccggtc 19281127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 2057944 - 2058021
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||| ||||||||| ||||||| ||||||||| |||||    
T  2057944 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgattttaggtc 2058021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 26578223 - 26578146
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||| ||||||||| ||||||| | |||||||||||||    
T  26578223 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgagtgatttcaggtc 26578146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 1582225 - 1582288
Alignment:
Q  7 agaaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    |||||||  ||||||||||| ||| ||||||||| ||||| |||| ||||||||||||||||||    
T  1582225 agaaaaagctagatctacgtgaaaatcacttatttagattaaaatggagagaaaaatatgaaga 1582288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 1602590 - 1602527
Alignment:
Q  7 agaaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    |||||||  ||||||||||| ||| ||||||||| ||||| |||| ||||||||||||||||||    
T  1602590 agaaaaagctagatctacgtgaaaatcacttatttagattaaaatggagagaaaaatatgaaga 1602527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 11767782 - 11767720
Alignment:
Q  9 aaaaacatagatctacgt-aaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    ||||||||| |||||||| |||| ||||||||| ||||||||||| ||||||||| |||||||    
T  11767782 aaaaacatatatctacgtgaaaaatcacttatttagattgaaatatagagaaaaagatgaaga 11767720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 21060387 - 21060461
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagag-ggtgatttcag 82  Q
    |||||| || ||||| || ||| ||||||||| ||||||||||| ||||||||| |||||||| |||||||||||    
T  21060387 aaaaacctacatctatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagagtggtgatttcag 21060461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 34881676 - 34881607
Alignment:
Q  16 tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagag-ggtgatttcaggtc 85  Q
    |||||||| || ||| ||||||||| |||||||||||||||| |||| |||||||| ||||||||||||||    
T  34881676 tagatctatgtgaaaatcacttatttagattgaaatagagag-aaaagatgaagagaggtgatttcaggtc 34881607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 7887043 - 7887120
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagaggg-tgatttcaggtc 85  Q
    |||||||||||| || || ||| ||||||||| ||||| |||||||||| |||| | |||||||| ||||||||||||    
T  7887043 aaaaacatagatttatgtgaaaatcacttatttagattaaaatagagaggaaaagacgaagagggatgatttcaggtc 7887120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 20257800 - 20257853
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaa 62  Q
    |||||| |||||||| || ||| ||||||||| |||||||||||||||||||||    
T  20257800 aaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaa 20257853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 19259918 - 19259972
Alignment:
Q  9 aaaaacatagatctacgt-aaaagtcacttattgagattgaaatagagagaaaaa 62  Q
    |||||| |||||||| || |||| ||||||||| |||||||||||||||||||||    
T  19259918 aaaaacttagatctatgtgaaaaatcacttatttagattgaaatagagagaaaaa 19259972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 36344586 - 36344672
Alignment:
Q  1 tcacaaagaaaaa-catagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||||||| | |||||| | || ||| | ||||||| ||||||||||| ||||||||| ||||||| ||||||||| |||||    
T  36344586 tcacaaagaaaaaacttagatccatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagaggggtgattttaggtc 36344672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 30298182 - 30298130
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaa 61  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||| ||||||||    
T  30298182 aaaaacctagatctatgtgaaaatcacttatttagattgaaatatagagaaaa 30298130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 42432851 - 42432803
Alignment:
Q  32 tcacttattgagattgaaatagagagaaaaatatgaagag-ggtgattt 79  Q
    |||||| || |||||||||||||||||||||||| ||||| ||||||||    
T  42432851 tcacttttttagattgaaatagagagaaaaatataaagagaggtgattt 42432803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 3850561 - 3850638
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||    
T  3850561 aaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtc 3850638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 21488073 - 21488003
Alignment:
Q  16 tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||||| ||||||||||||| |||||||||| |||||||||| |||||||  ||||||||||||||    
T  21488073 tagatctacgtgaaagtcacttatttagattgaaatggagagaaaaagatgaagattggtgatttcaggtc 21488003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 29503440 - 29503354
Alignment:
Q  1 tcacaaagaaaaa-catagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||||||| | |||||||| || ||| ||| ||||| ||||||||||| ||||||||||||||||| |||||||||||||||    
T  29503440 tcacaaagaaaaaacctagatctatgtgaaaatcaattatttagattgaaatatagagaaaaatatgaagatgggtgatttcaggtc 29503354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 22802990 - 22802917
Alignment:
Q  10 aaaacatagatctacgt-aaaagtcacttattgagattgaaatagagagaaaaatatgaagagg-gtgatttca 81  Q
    ||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||| ||||||||| |||||||||    
T  22802990 aaaacctagatctacgtgaaaaatcacttatttagattgaaatagagagaaaaagatgaagaggagtgatttca 22802917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 38440683 - 38440760
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagagg-gtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||||||||||||| || |||||| |||||||||||||    
T  38440683 aaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagataaagaggagtgatttcaggtc 38440760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 39917502 - 39917579
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| |||||||| |||||||||||||||||||| || ||||||||||||    
T  39917502 aaaaacctagatctatgtgaaaatcacttatttagattgaattagagagaaaaatatgaagatggatgatttcaggtc 39917579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 35499307 - 35499384
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga--gggtgatttcaggt 84  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||| ||||||||| |||||||  ||||||||||||||    
T  35499307 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagggggtgatttcaggt 35499384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 2342460 - 2342395
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagagggt 74  Q
    ||||| |||||| || || ||| ||||||||| ||||||||||||||||||||| |||||||||||    
T  2342460 aaaaatatagatatatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagagggt 2342395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 4172535 - 4172474
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||||||||||||| |||||||    
T  4172535 aaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga 4172474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 14464476 - 14464399
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||| ||||||||| ||||| | |||||||||||||||    
T  14464476 aaaaacttagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaataggggtgatttcaggtc 14464399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 25162404 - 25162332
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttca 81  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  25162404 aaaaacctagatctatgtgaaa-tcacttatttagattgaaatagagagaaaaagatgaagatgggtgatttca 25162332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 25631633 - 25631710
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagaggg-tgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||||||||||||| ||| |||||| |||||| |||||    
T  25631633 aaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatggagagggatgattttaggtc 25631710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 42719489 - 42719412
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| ||||||||| | ||| ||||||||| | ||||||||||||||||||||| ||||| | |||||||||||||    
T  42719489 aaaaacctagatctacatgaaaatcacttatttaaattgaaatagagagaaaaatacgaagatgagtgatttcaggtc 42719412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 44907505 - 44907582
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| |||||| || ||||||||||| ||||||||| ||||||| |||||||||||||||    
T  44907505 aaaaacctagatctatgtgaaaatcacttgtttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtc 44907582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 46934611 - 46934534
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| | |||||| || ||| ||||||||| ||||||||||||||||| ||| ||||||| |||||||||||||||    
T  46934611 aaaaacctggatctatgtgaaaatcacttatttagattgaaatagagagagaaagatgaagaggggtgatttcaggtc 46934534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 32607436 - 32607360
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagagggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||| ||||||||  ||||||||||  ||||||||||    
T  32607436 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaatgatgaagaggggtatttcaggtc 32607360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 51202388 - 51202432
Alignment:
Q  42 agattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  51202388 agattgaaatagagagaaaaatatgaagatgggtgatttcaggtc 51202432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 4178510 - 4178456
Alignment:
Q  32 tcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||||||||| |||||    
T  4178510 tcacttatttagattgaaatagagagaaaaagatgaagatgggtgattttaggtc 4178456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 46178546 - 46178468
Alignment:
Q  9 aaaaacatagatctacgt-aaaagtcacttattgagattgaaatagagagaaaaatatgaagaggg-tgatttcaggtc 85  Q
    |||||| |||||||| || ||||  |||||||| |||||||| |||||||||||| |||||||||| ||||||||||||    
T  46178546 aaaaacctagatctatgtgaaaaagcacttatttagattgaattagagagaaaaagatgaagagggatgatttcaggtc 46178468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 36906090 - 36906013
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| || ||||| || ||| ||||||||| | ||||||||| ||||||||| ||||||| |||||||||||||||    
T  36906090 aaaaacctaaatctatgtgaaaatcacttatttatattgaaataaagagaaaaagatgaagaagggtgatttcaggtc 36906013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 38855150 - 38855207
Alignment:
Q  16 tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagaggg 73  Q
    |||||||| || ||| ||||||||| ||||||| ||||||||||||| ||||||||||    
T  38855150 tagatctatgtgaaaatcacttatttagattgatatagagagaaaaagatgaagaggg 38855207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 50611523 - 50611600
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| ||||||||  | ||| ||||||||| ||||||||||| ||||||||| ||||||| ||||||||| |||||    
T  50611523 aaaaacctagatctatatgaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgattttaggtc 50611600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 49552352 - 49552406
Alignment:
Q  32 tcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||| ||||||||||||||| ||||  ||||||| |||||||||||||||    
T  49552352 tcacttatttagattgaaatagagaaaaaatgatgaagaggggtgatttcaggtc 49552406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 54378878 - 54378808
Alignment:
Q  1 tcacaaagaaaaacatagatctacgt-aaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    |||| ||||||||  ||||||||||| |||| ||||| ||| |||||||||| ||||||||||||| ||||    
T  54378878 tcacgaagaaaaaattagatctacgtgaaaaatcactcatttagattgaaatggagagaaaaatattaaga 54378808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 12116062 - 12115985
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagag-ggtgatttcaggtc 85  Q
    |||||| |||||||  || ||| ||||||||| ||||||||||| |||| |||| |||||||| | ||||||||||||    
T  12116062 aaaaacctagatctttgtgaaaatcacttatttagattgaaataaagaggaaaagatgaagagagatgatttcaggtc 12115985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 17237771 - 17237710
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    |||||| || ||||| || ||| ||||||||| ||||||||||||||||||| | |||||||    
T  17237771 aaaaacctaaatctatgtgaaaatcacttatttagattgaaatagagagaaacagatgaaga 17237710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 20047188 - 20047264
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagagggtgatttcaggtc 85  Q
    |||||| || ||||| |||||||||||||||| ||||||||| ||||||||||| ||||| ||||||||||||||||    
T  20047188 aaaaacctaaatctatgtaaaagtcacttatttagattgaaaaagagagaaaaagatgaatagggtgatttcaggtc 20047264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 2808568 - 2808653
Alignment:
Q  1 tcacaaagaaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||||||||||| |||||||| || ||| ||||||||| ||| ||||||||||||||| | ||||||| |||||||||||||||    
T  2808568 tcacaaagaaaaacctagatctatgtgaaaatcacttatttagactgaaatagagagaaatagatgaagaggggtgatttcaggtc 2808653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 6173607 - 6173530
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||    
T  6173607 aaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtc 6173530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 32680688 - 32680765
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||||||||||||| ||||||||||||||||||||| ||||||| | |||||||||||||    
T  32680688 aaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagatgagtgatttcaggtc 32680765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 41431013 - 41430929
Alignment:
Q  1 tcacaaagaaaaaca--tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcag 82  Q
    |||||||||||||||  |||||||| |||||||| ||||||| ||||||||||| ||||||||| ||||||| ||||||||||||    
T  41431013 tcacaaagaaaaacacctagatctatgtaaaagtgacttatttagattgaaatatagagaaaaagatgaagaggggtgatttcag 41430929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 45128179 - 45128102
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||||||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||    
T  45128179 aaaaacctagatctatgtgaaagtcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtc 45128102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 27249257 - 27249334
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||    
T  27249257 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtc 27249334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 30420652 - 30420575
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||    
T  30420652 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtc 30420575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 21570521 - 21570591
Alignment:
Q  16 tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||||| || ||| ||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||    
T  21570521 tagatctatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgatttcaggtc 21570591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 36233973 - 36233903
Alignment:
Q  16 tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||||| || ||| ||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||    
T  36233973 tagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtc 36233903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 40626124 - 40626210
Alignment:
Q  1 tcacaaagaaaaa-catagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||||||| | |||||||| || ||| || |||||| ||||||||||||||||||||| | ||||| |||||||||||||||    
T  40626124 tcacaaagaaaaaacgtagatctatgtgaaaatcccttatttagattgaaatagagagaaaaagacgaagaggggtgatttcaggtc 40626210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22421720 - 22421659
Alignment:
Q  1 tcacaaagaaaaa-catagatctacgtaaaagtcacttattgagattgaaatagagagaaaa 61  Q
    ||||||||||||| | |||||||| || ||||||||||||| ||||||||||||||||||||    
T  22421720 tcacaaagaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaa 22421659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 26025506 - 26025590
Alignment:
Q  1 tcacaaagaaaaa-catagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga--gggtgatttcag 82  Q
    ||||||||||||| | |||||||| || |||  |||||||| ||||||||||||||||||||| |||||||  ||||||||||||    
T  26025506 tcacaaagaaaaaacctagatctatgtgaaaaccacttatttagattgaaatagagagaaaaagatgaagatggggtgatttcag 26025590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 31581832 - 31581888
Alignment:
Q  16 tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagagg 72  Q
    |||||||| || ||| ||||||||| ||||||||||||||||||||| |||||||||    
T  31581832 tagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagagg 31581888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 34598956 - 34598902
Alignment:
Q  16 tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    |||||||| || ||| ||||||||| ||||||||||||||||||||| |||||||    
T  34598956 tagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga 34598902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 4228107 - 4228030
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||||||||| ||  || ||||||||| | ||||||||| ||| ||||||||||||| | |||||||||||||    
T  4228107 aaaaacatagatctatgtgtaaatcacttatttatattgaaataaagataaaaatatgaagatgtgtgatttcaggtc 4228030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 8971723 - 8971811
Alignment:
Q  1 tcacaaagaaaaa-catagatctacgtaaaagtcacttattgagattgaaata--gagagaaaaatatgaagaggg-tgatttcaggtc 85  Q
    ||||||||||||| | |||||||| || ||| ||||||||| ||||| |||||  |||||||||| |||||||||| ||||||||||||    
T  8971723 tcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattaaaataaagagagaaaaagatgaagagggatgatttcaggtc 8971811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 18695014 - 18694970
Alignment:
Q  18 gatctacgtaaaagtcacttattgagattgaaatagagagaaaaa 62  Q
    |||||| |||||| ||||||||| |||||||||||||||||||||    
T  18695014 gatctatgtaaaaatcacttatttagattgaaatagagagaaaaa 18694970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 27949398 - 27949322
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagagggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||| |||| |||||  ||||| || |||||||||||||    
T  27949398 aaaaacctagatctatgtgaaaatcacttatttagattgaaacagagcgaaaaggatgaatagtgtgatttcaggtc 27949322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 3725148 - 3725093
Alignment:
Q  17 agatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagagg 72  Q
    ||||||| || ||| ||||||||| | ||||||||||||||||||| |||||||||    
T  3725148 agatctatgtgaaaatcacttatttatattgaaatagagagaaaaagatgaagagg 3725093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 4192791 - 4192737
Alignment:
Q  32 tcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||| ||||||||||| ||||||||| ||||||| ||||||| |||||||    
T  4192791 tcacttatttagattgaaatatagagaaaaagatgaagaggggtgatctcaggtc 4192737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8805851 - 8805781
Alignment:
Q  1 tcacaaagaaaaa-catagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    ||||||||||||| | |||||| | || ||| ||||||||| | ||||||||| |||||||||||||||||    
T  8805851 tcacaaagaaaaaacctagatccatgtgaaaatcacttatttaaattgaaataaagagaaaaatatgaaga 8805781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 27477123 - 27477057
Alignment:
Q  16 tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttca 81  Q
    |||||||| || ||| | ||||||| ||||||||||| ||||||||| ||||||| |||||||||||    
T  27477123 tagatctatgtgaaaattacttatttagattgaaatatagagaaaaagatgaagaggggtgatttca 27477057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 42949690 - 42949616
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagag-aaaaatatgaaga-gggtgatttca 81  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||| |||| ||||| ||||||| |||||||||||    
T  42949690 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaaagatgaagaggggtgatttca 42949616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 3270334 - 3270411
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||| | ||||||| ||||| | | |||||||||||||    
T  3270334 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaaaagaaaaagatgaaaatgagtgatttcaggtc 3270411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 39641965 - 39642026
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    |||||| |||||||| || ||| ||| ||||| | ||||||||||||||||||| |||||||    
T  39641965 aaaaacctagatctatgtgaaaatcatttatttaaattgaaatagagagaaaaagatgaaga 39642026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 23425468 - 23425554
Alignment:
Q  1 tcacaaagaaaaa-catagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||||||| | |||||||| |||||| ||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||    
T  23425468 tcacaaagaaaaaacctagatctatgtaaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgatttcaggtc 23425554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 35667337 - 35667408
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaag-agggtgattt 79  Q
    |||||| |||||||| || ||| ||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  35667337 aaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaatatgaagaagggtgattt 35667408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 1485369 - 1485439
Alignment:
Q  16 tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||||| || ||||||||||||| ||||||||||||||||||||| ||||||| ||||||||| |||||    
T  1485369 tagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagacgggtgattttaggtc 1485439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 20116563 - 20116477
Alignment:
Q  1 tcacaaagaaaaa-catagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaag-agggtgatttcaggtc 85  Q
    ||||||||||||| | |||||||| || ||| ||||||||| ||||||||||||| ||||||| |||||| ||||||||||||||||    
T  20116563 tcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagatagaaaaagatgaagaagggtgatttcaggtc 20116477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 48207882 - 48207796
Alignment:
Q  1 tcacaaagaaaaa-catagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||||||| |||||||||| || ||| ||||||||| |||||||||||  |||||||| ||||||| |||||||||||||||    
T  48207882 tcacaaagaaaaaacatagatctatgtgaaaatcacttatttagattgaaatattgagaaaaagatgaagaggggtgatttcaggtc 48207796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 433788 - 433875
Alignment:
Q  1 tcacaaagaaaaacat--agatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagaggg-tgatttcaggtc 85  Q
    ||||||||||||| ||  ||||||| || ||||||| ||||| ||||||||||||||||||||| ||||| |||| ||||||||||||    
T  433788 tcacaaagaaaaaaatctagatctatgtgaaagtcatttatttagattgaaatagagagaaaaagatgaaaagggatgatttcaggtc 433875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 22927966 - 22928053
Alignment:
Q  1 tcacaaagaaaaaca--tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||||||| |  |||||||  || ||||||||||||| ||||||||||||||||||||| ||||| | |||||||||||||||    
T  22927966 tcacaaagaaaaaaaactagatctgtgtgaaagtcacttatttagattgaaatagagagaaaaagatgaaaaggggtgatttcaggtc 22928053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 2843327 - 2843410
Alignment:
Q  3 acaaagaaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||| |||||| |||||||| || ||| ||||||||| ||||||||||| ||||||||| ||||||| ||||| |||||||||    
T  2843327 acaaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgttttcaggtc 2843410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 46821978 - 46821908
Alignment:
Q  16 tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||||| || ||| ||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||    
T  46821978 tagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtc 46821908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 21266367 - 21266290
Alignment:
Q  5 aaagaaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagag-ggtgatttca 81  Q
    |||||||| | |||||||| || ||| ||||||||| ||||||||||| ||||||||| |||||||| ||||||||||    
T  21266367 aaagaaaaccctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttca 21266290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 32684660 - 32684595
Alignment:
Q  5 aaagaaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    |||||||||| |||||||| || ||| ||||||||| ||||||||||||||||||||  |||||||    
T  32684660 aaagaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaacgatgaaga 32684595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 42311251 - 42311174
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagaggg-tgatttcaggtc 85  Q
    |||||| |||||||| || ||  ||||||||| ||||||||||||||||||||  |||||||||| ||||||||||||    
T  42311251 aaaaacctagatctatgtgaatatcacttatttagattgaaatagagagaaaatgatgaagagggatgatttcaggtc 42311174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 23085492 - 23085428
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagaggg 73  Q
    |||||| |||||||| || ||||||| ||||| ||||||||||||| ||||||| ||||||||||    
T  23085492 aaaaacctagatctatgtgaaagtcaattatttagattgaaatagaaagaaaaagatgaagaggg 23085428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 26492346 - 26492259
Alignment:
Q  1 tcacaaagaaaaaca--tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||||||| |  |||||||| || ||| ||||||||| | ||||||||||||||||||| ||||||| |||| ||||||||||    
T  26492346 tcacaaagaaaaaaaactagatctatgtgaaaatcacttatttaaattgaaatagagagaaaaagatgaagaggggttatttcaggtc 26492259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 31235898 - 31235962
Alignment:
Q  10 aaaacatagatctacgt-aaaagtcacttattgagattgaaatagagagaaaaatatgaagaggg 73  Q
    ||||| |||||||| || |||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  31235898 aaaacctagatctatgtgaaaaatcacttatttagattgaaatagagagaaaaagatgaagaggg 31235962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 26583662 - 26583608
Alignment:
Q  32 tcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||| ||||||||||||||| ||||| ||||||| |||||||||||||||    
T  26583662 tcacttatttagattgaaatagagataaaaagatgaagaggggtgatttcaggtc 26583608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 35496281 - 35496342
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    |||||| |||||||| || ||| ||||||| | ||||||||||||||||||||| |||||||    
T  35496281 aaaaacctagatctatgtgaaaatcacttaattagattgaaatagagagaaaaagatgaaga 35496342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 36143837 - 36143776
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    |||||| ||||||||||| |||  |||||||| |||||||| |||||||||||| |||||||    
T  36143837 aaaaacctagatctacgtgaaaaacacttatttagattgaattagagagaaaaagatgaaga 36143776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 1448942 - 1448995
Alignment:
Q  16 tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaag 69  Q
    |||||||| || ||| ||||||||| ||||||||||||||||||| | ||||||    
T  1448942 tagatctatgtgaaaatcacttatttagattgaaatagagagaaagagatgaag 1448995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 5369 - 5292
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||||||||| || |||||||||||||||| |||||||| |||||||| ||| ||||||| |||||||||||||||    
T  5369 aaaaacatagatatatgtaaaagtcacttatttagattgaagtagagagagaaagatgaagaggggtgatttcaggtc 5292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 10228650 - 10228573
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||||||||| || |||||||||||||||| |||||||| |||||||| ||| ||||||| |||||||||||||||    
T  10228650 aaaaacatagatatatgtaaaagtcacttatttagattgaagtagagagagaaagatgaagaggggtgatttcaggtc 10228573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 16419129 - 16419053
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggt 84  Q
    ||||||| ||||||| || ||||||||||||| ||||||||||||||||||||| ||||||| ||||||||| ||||    
T  16419129 aaaaacaaagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagatgggtgattttaggt 16419053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 12652904 - 12652834
Alignment:
Q  16 tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||||| || ||| ||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||    
T  12652904 tagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtc 12652834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 8496936 - 8496859
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||    
T  8496936 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtc 8496859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 23947423 - 23947500
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||||||||||||  ||||||| |||||||||||||||    
T  23947423 aaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaacgatgaagatgggtgatttcaggtc 23947500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 25064206 - 25064129
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagag-ggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||| ||||||||| |||||||| ||||||||||||||    
T  25064206 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtc 25064129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 35001561 - 35001508
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaa 62  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||||||||||||    
T  35001561 aaaaacatagatctatgtaaaagtcacttatttagattaaaatagagagaaaaa 35001508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 8196513 - 8196590
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||||||||||||| ||||| | ||||||||| |||||    
T  8196513 aaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaatacgggtgattttaggtc 8196590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 33740684 - 33740761
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| || ||||| || ||| ||||||||| ||||||||||||||||||||| ||||||| ||||||||| |||||    
T  33740684 aaaaacctaaatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgattttaggtc 33740761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 7876158 - 7876228
Alignment:
Q  16 tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||||| || ||| ||||||||| ||||||||||| ||||||||| ||||||| ||||||||| |||||    
T  7876158 tagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgattttaggtc 7876228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17237381 - 17237463
Alignment:
Q  1 tcacaaagaaaaa-catagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttca 81  Q
    ||||||||||||| | |||||||| || ||| | ||||||| ||||||||||| ||||||||| ||||||| |||||||||||    
T  17237381 tcacaaagaaaaaacctagatctatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagaggggtgatttca 17237463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 33109814 - 33109744
Alignment:
Q  1 tcacaaagaaaaa-catagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    ||||||||||||| | |||||||| || ||| ||||||||| ||||||||||| ||||||||| |||||||    
T  33109814 tcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga 33109744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4468539 - 4468466
Alignment:
Q  1 tcacaaagaaaaa-catagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagaggg 73  Q
    ||||||||||||| | ||||||||  | ||| ||||||||| |||||||||||||||||| || ||||||||||    
T  4468539 tcacaaagaaaaaacctagatctatatgaaaatcacttatttagattgaaatagagagaacaagatgaagaggg 4468466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 8028224 - 8028284
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaag 69  Q
    |||||| |||||||| || ||| ||||||||| ||||||||| ||||||||||| ||||||    
T  8028224 aaaaacttagatctatgtgaaaatcacttatttagattgaaacagagagaaaaagatgaag 8028284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 28635226 - 28635305
Alignment:
Q  9 aaaaacatagatctacgtaaaag--tcacttattgagattgaaatagagagaaaaatatgaagaggg-tgatttcaggtc 85  Q
    |||||| |||||||| |||||||  ||||||||| | ||||||||| | |||||||||||||||||| |||||| |||||    
T  28635226 aaaaacttagatctatgtaaaagaatcacttatttaaattgaaataaaaagaaaaatatgaagagggatgatttgaggtc 28635305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 7881216 - 7881270
Alignment:
Q  16 tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    |||||||| || ||| ||||||||| ||||||||||| ||||||||| |||||||    
T  7881216 tagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga 7881270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 17334746 - 17334672
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcag 82  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||| | ||||||| |||||||  |||||||||||    
T  17334746 aaaaacttagatctatgtgaaaatcacttatttagattgaaataaacagaaaaagatgaagattggtgatttcag 17334672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 12165812 - 12165735
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagagg-gtgatttcaggtc 85  Q
    |||||| || ||||| || ||| ||||||||| ||||||||||||  | ||||| ||||||||| |||||||||||||    
T  12165812 aaaaacctaaatctatgtgaaaatcacttatttagattgaaataggcataaaaagatgaagaggagtgatttcaggtc 12165735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 10389859 - 10389936
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||||||||||||| ||||||||||||||||||||| ||||||| | |||||||||||||    
T  10389859 aaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagatgagtgatttcaggtc 10389936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 56194582 - 56194505
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagagg-gtgatttcaggtc 85  Q
    |||||| |||||||| || ||||||||||||| ||||||||||||||||||||| |||||||||  ||||||||||||    
T  56194582 aaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggtttgatttcaggtc 56194505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 6972792 - 6972718
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagag-ggtgatttcag 82  Q
    |||||||| |||||| |||||||||||||||| ||||||||||| ||| ||||| |||||||| |||||||||||    
T  6972792 aaaaacatggatctatgtaaaagtcacttatttagattgaaatacagataaaaagatgaagagaggtgatttcag 6972718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 8009457 - 8009526
Alignment:
Q  1 tcacaaagaaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    |||||||||||||  |||||||| || ||| ||||||||| ||||||||||||||||||||| |||||||    
T  8009457 tcacaaagaaaaaactagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga 8009526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 9645655 - 9645732
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||||||||||||| ||||||||||||||| ||||| ||||||| ||||||| |||||||    
T  9645655 aaaaacctagatctatgtgaaagtcacttatttagattgaaatagagacaaaaagatgaagaggggtgatatcaggtc 9645732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 34024542 - 34024619
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| | ||||||| ||||||||||||||||||||| ||||||| |||||||||||||||    
T  34024542 aaaaacctagatctatgtgaaaataacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtc 34024619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 35965080 - 35965157
Alignment:
Q  9 aaaaacatagatctacgt-aaaagtcacttattgagattgaaatagagagaaaaatatgaagag-ggtgatttcaggt 84  Q
    |||||| |||||||| || |||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||||    
T  35965080 aaaaacctagatctatgtgaaaaatcacttattcagattgaaatagagagaaaaagatgaagagaggtgatttcaggt 35965157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 51317969 - 51317892
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||||||||||||| ||||||| | |||||||||||||    
T  51317969 aaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatgagtgatttcaggtc 51317892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 9283894 - 9283818
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggt 84  Q
    |||||| |||||||| |||||| ||||||||| ||||||||||| ||||||||  ||||||| ||||||||||||||    
T  9283894 aaaaacctagatctatgtaaaaatcacttatttagattgaaataaagagaaaacgatgaagaggggtgatttcaggt 9283818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 5333655 - 5333709
Alignment:
Q  27 aaaagtcacttattgagattgaaatagagagaaaaatatgaagagggtgatttca 81  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||||||||||||    
T  5333655 aaaaatcacttatttatattgaaatagagagaaaaagatgaagagggtgatttca 5333709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 9528984 - 9529061
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||| ||||| || ||| ||||||||| ||||||||||| ||||||||| || |||| |||||||||||||||    
T  9528984 aaaaacataaatctatgtgaaaatcacttatttagattgaaataaagagaaaaagataaagaggggtgatttcaggtc 9529061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 37188690 - 37188775
Alignment:
Q  1 tcacaaagaaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||||||||||  ||||| || || ||| ||||||||| ||||||||||| ||||||||| ||||||| | |||||||||||||    
T  37188690 tcacaaagaaaaaactagatatatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagatgagtgatttcaggtc 37188775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 47416867 - 47416794
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttca 81  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||| ||||||||| ||||||| |||||||||||    
T  47416867 aaaaacttagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttca 47416794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 53616757 - 53616834
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagag-ggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||| ||||||||  |||||||| ||||||||||||||    
T  53616757 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaacgatgaagagtggtgatttcaggtc 53616834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 20569235 - 20569159
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggt 84  Q
    |||||| |||||||| || ||| ||| ||||| ||||||||||| ||||||||| ||||||| ||||||||||||||    
T  20569235 aaaaacctagatctatgtgaaaatcatttatttagattgaaataaagagaaaaaaatgaagaggggtgatttcaggt 20569159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 27593952 - 27594016
Alignment:
Q  17 agatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagagggtgatttca 81  Q
    ||||||| || ||| || |||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  27593952 agatctatgtgaaactcgcttatttagattgaaatatagagaaaaagatgaagagggtgatttca 27594016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 38706816 - 38706887
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaag-agggtgattt 79  Q
    |||||| || ||||| || ||| ||||||||| ||||||||||||||||||||| |||||| ||||||||||    
T  38706816 aaaaacctaaatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagaagggtgattt 38706887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 4643818 - 4643762
Alignment:
Q  32 tcacttattgagattgaaatagagagaaaaatatgaaga---gggtgatttcaggtc 85  Q
    ||||||||| ||||||||||||||||||||| |||||||   |||||||||||||||    
T  4643818 tcacttatttagattgaaatagagagaaaaagatgaagaggggggtgatttcaggtc 4643762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 43444376 - 43444302
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcag 82  Q
    |||||| ||||| || || ||| ||||||||| ||||||||||| ||||||||| ||||||| ||||||||||||    
T  43444376 aaaaacctagatatatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgatttcag 43444302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 50766615 - 50766689
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagaggg-tgatttcag 82  Q
    |||||| |||||||| || ||| ||| ||||| ||||||||||| ||||||||| |||||||||| |||||||||    
T  50766615 aaaaacttagatctatgtgaaaatcatttatttagattgaaataaagagaaaaagatgaagagggatgatttcag 50766689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 10359652 - 10359729
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaag-agggtgatttcaggtc 85  Q
    |||||| ||||| || || ||| ||||||||| |||| |||||||||||||||| ||||||  |||||||||||||||    
T  10359652 aaaaacctagatatatgttaaaatcacttatttagatcgaaatagagagaaaaagatgaagttgggtgatttcaggtc 10359729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 12265438 - 12265361
Alignment:
Q  10 aaaacatagatctacgt-aaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||| |||||||| || |||| ||||||||| |||||||||||| || ||||| ||||||| |||||||||||||||    
T  12265438 aaaacctagatctatgtgaaaaatcacttatttagattgaaatagggataaaaagatgaagaggggtgatttcaggtc 12265361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 43154127 - 43154199
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttca 81  Q
    |||||| |||||||| || ||| ||||||||| |||||||||||||||| |||| ||||||| |||||||||||    
T  43154127 aaaaacctagatctatgtgaaaatcacttatttagattgaaatagagag-aaaagatgaagaggggtgatttca 43154199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 25273863 - 25273811
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaa 61  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||||||||||||    
T  25273863 aaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaa 25273811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 1531883 - 1531812
Alignment:
Q  16 tagatctacgtaaaagtcacttattgagattgaaatagagaga-aaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||||| || ||| ||||||||| ||||||||||||||||| |||| || |||| |||||||||||||||    
T  1531883 tagatctatgtgaaaatcacttatttagattgaaatagagagagaaaagataaagaggggtgatttcaggtc 1531812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 5333583 - 5333642
Alignment:
Q  27 aaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||| | |||||||||||||    
T  5333583 aaaaatcacttatttatattgaaatagagagaaaaagatgaagatgtgtgatttcaggtc 5333642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 18139037 - 18139096
Alignment:
Q  27 aaaagtcacttattgagattgaaatagagagaaaaatatgaagagg-gtgatttcaggtc 85  Q
    |||| ||||||||| ||||||||||||||||||||  ||||||||| |||||| ||||||    
T  18139037 aaaaatcacttatttagattgaaatagagagaaaatgatgaagaggtgtgattccaggtc 18139096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 49126250 - 49126309
Alignment:
Q  27 aaaagtcacttattgagattgaaatagagagaaaaatatgaagagg-gtgatttcaggtc 85  Q
    |||| ||||||||| ||||||||||||||||||||  ||||||||| |||||| ||||||    
T  49126250 aaaaatcacttatttagattgaaatagagagaaaatgatgaagaggtgtgattccaggtc 49126309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 21090136 - 21090062
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcag 82  Q
    |||||| || ||||| || ||| ||||||||| | ||||||||||||||||||| ||||||| | ||||||||||    
T  21090136 aaaaacctaaatctatgtgaaaatcacttatttatattgaaatagagagaaaaagatgaagatgagtgatttcag 21090062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 31381768 - 31381854
Alignment:
Q  1 tcacaaagaaaaa-catagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatga-agagggtgatttcaggtc 85  Q
    ||||||||||||| | |||||||| || ||| ||||||||| | ||||||| ||||||||||| |||| |  |||||||||||||||    
T  31381768 tcacaaagaaaaaacttagatctatgtgaaaatcacttatttaaattgaaaaagagagaaaaagatgagaaggggtgatttcaggtc 31381854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 2115694 - 2115755
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    |||||| || ||||| || ||| ||||||||| ||||||||||| ||||||||| |||||||    
T  2115694 aaaaacctaaatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga 2115755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32952844 - 32952913
Alignment:
Q  1 tcacaaagaaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    |||||||||||||  |||||||| || |||  |||||||| |  |||||||||||||||||| |||||||    
T  32952844 tcacaaagaaaaaactagatctatgtgaaaaacacttatttaatttgaaatagagagaaaaagatgaaga 32952913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 29965617 - 29965565
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaa 61  Q
    |||||| |||||||| || ||| ||||||||| ||||||||||| ||||||||    
T  29965617 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaa 29965565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 33896059 - 33895995
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagaggg 73  Q
    |||||| |||||||| || ||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  33896059 aaaaacctagatctatgtgaaagtcacttatttagatttaaatagagagaaaaagatgaagaggg 33895995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 14907037 - 14907107
Alignment:
Q  16 tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||||| || ||| ||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||    
T  14907037 tagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgatttcaggtc 14907107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 42448157 - 42448211
Alignment:
Q  32 tcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||    
T  42448157 tcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtc 42448211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 28239787 - 28239734
Alignment:
Q  33 cacttattgagattgaaatagagagaaaaatatgaagag-ggtgatttcaggtc 85  Q
    |||||||| ||||||||||||||||||||| |||||||| ||||||||||||||    
T  28239787 cacttatttagattgaaatagagagaaaaagatgaagagaggtgatttcaggtc 28239734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 9619474 - 9619541
Alignment:
Q  19 atctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||| || ||| ||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||    
T  9619474 atctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtc 9619541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 2655840 - 2655770
Alignment:
Q  16 tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||||| || ||| ||||||||| ||||||||||| ||||||||| ||||||| |||||||| ||||||    
T  2655840 tagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgattgcaggtc 2655770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 9072676 - 9072622
Alignment:
Q  28 aaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttca 81  Q
    ||||||||||||| | ||||||||||||||||||| ||||||| |||||||||||    
T  9072676 aaagtcacttatttaaattgaaatagagagaaaaagatgaagaggggtgatttca 9072622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 16794280 - 16794198
Alignment:
Q  1 tcacaaagaaaaacatagatctacgt-aaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttca 81  Q
    |||| ||||||||| ||||| || || |||| ||||||||| |||||||| |||||||||||| ||||||| |||||||||||    
T  16794280 tcacgaagaaaaacctagatttatgtgaaaaatcacttatttagattgaattagagagaaaaagatgaagatgggtgatttca 16794198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 44100029 - 44100115
Alignment:
Q  1 tcacaaagaaaaa-catagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||||||||| | |||||||| || ||| | ||||||| ||||||||||| ||||||||| ||||||| ||||||||| |||||    
T  44100029 tcacaaagaaaaaacttagatctatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagaggggtgattttaggtc 44100115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 11725660 - 11725583
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || |||  |||||||| ||||||||||| ||||||||| | ||||| |||||||||||||||    
T  11725660 aaaaacctagatctatgtgaaaaacacttatttagattgaaataaagagaaaaagacgaagaggggtgatttcaggtc 11725583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 17949217 - 17949148
Alignment:
Q  17 agatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    ||||||| || ||| || |||||| |||||||||||||||||||||  |||||| |||||||||||||||    
T  17949217 agatctatgtgaaaatcgcttatttagattgaaatagagagaaaaaggtgaagaggggtgatttcaggtc 17949148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 34611782 - 34611705
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| ||||| || || ||| ||||||||| ||| ||||||||| ||||||||||||||| | |||||||||||||    
T  34611782 aaaaacctagatttatgtgaaaatcacttatttagactgaaatagaaagaaaaatatgaagatgagtgatttcaggtc 34611705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 35580436 - 35580375
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    |||||| |||||||| || ||| ||||||||| | ||||||||||||||||||| |||||||    
T  35580436 aaaaacctagatctatgtgaaaatcacttatttaaattgaaatagagagaaaaagatgaaga 35580375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 44578014 - 44577937
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagagg-gtgatttcaggtc 85  Q
    |||||| |||||||| ||  || ||||||| | ||||||||||||||||||||| ||||||||| ||||||| |||||    
T  44578014 aaaaacctagatctatgtgtaaatcacttagttagattgaaatagagagaaaaagatgaagaggagtgattttaggtc 44577937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 9498708 - 9498784
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggt 84  Q
    |||||| || ||||| || ||| ||||||||| ||||||||||| ||| ||||| ||||||| ||||||||||||||    
T  9498708 aaaaacctaaatctatgtgaaaatcacttatttagattgaaataaagataaaaagatgaagaggggtgatttcaggt 9498784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 43192451 - 43192503
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaa 61  Q
    |||||| |||||||| ||||||  |||||||| ||||||||||||||||||||    
T  43192451 aaaaacctagatctatgtaaaaaccacttatttagattgaaatagagagaaaa 43192503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 29777181 - 29777134
Alignment:
Q  35 cttattgagattgaaatagagagaaaaatatgaagagg-gtgatttca 81  Q
    |||||| ||||||||||||||||||||| ||||||||| |||||||||    
T  29777181 cttatttagattgaaatagagagaaaaagatgaagaggagtgatttca 29777134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 11196868 - 11196793
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttcaggtc 85  Q
    |||||| |||||||| || ||| ||||||||| |||||||||||  |||||||| ||||||| || ||||||||||||    
T  11196868 aaaaacctagatctatgtgaaaatcacttatttagattgaaata--gagaaaaagatgaagatggatgatttcaggtc 11196793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 32724602 - 32724671
Alignment:
Q  16 tagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaagag-ggtgatttcaggtc 85  Q
    |||||||| || ||| ||||||||| |||||||||||||||| |||| ||||||||  |||||||||||||    
T  32724602 tagatctatgtgaaaatcacttatttagattgaaatagagag-aaaagatgaagagaagtgatttcaggtc 32724671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 25241731 - 25241767
Alignment:
Q  32 tcacttattgagattgaaatagagagaaaaatatgaa 68  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  25241731 tcacttattgagattgaaatagaaagaaaaagatgaa 25241767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 8700 - 8618
Alignment:
Q  1 tcacaaagaaaaa-catagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga-gggtgatttca 81  Q
    ||||||||||||| | |||||||| || ||| ||||||||| ||||||||||||||| ||||| ||||| | |||||||||||    
T  8700 tcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagataaaaagatgaaaaggggtgatttca 8618  T

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Target: scaffold0146 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 16428 - 16489
Alignment:
Q  9 aaaaacatagatctacgtaaaagtcacttattgagattgaaatagagagaaaaatatgaaga 70  Q
    |||||| || ||||| || ||| ||||||||| ||||||||||||||||||| | |||||||    
T  16428 aaaaacctaaatctatgtgaaaatcacttatttagattgaaatagagagaaacagatgaaga 16489  T

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