View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11385A_low_247 (Length: 242)

Name: NF11385A_low_247
Description: NF11385A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11385A_low_247
NF11385A_low_247
[»] chr4 (50 HSPs)
chr4 (23-158)||(39388086-39388222)
chr4 (155-225)||(9247146-9247216)
chr4 (156-225)||(40563673-40563742)
chr4 (157-225)||(5199308-5199376)
chr4 (157-225)||(14676192-14676260)
chr4 (157-225)||(22110927-22110995)
chr4 (157-225)||(34272475-34272543)
chr4 (157-225)||(40463475-40463543)
chr4 (158-225)||(14658111-14658178)
chr4 (158-225)||(17010115-17010182)
chr4 (158-225)||(17024080-17024147)
chr4 (158-225)||(18044616-18044683)
chr4 (158-225)||(19638933-19639000)
chr4 (158-225)||(39128501-39128568)
chr4 (155-225)||(15195566-15195636)
chr4 (157-225)||(5317723-5317791)
chr4 (157-225)||(6556676-6556744)
chr4 (157-225)||(11772515-11772583)
chr4 (157-225)||(13441742-13441810)
chr4 (157-225)||(14657758-14657826)
chr4 (157-225)||(30278960-30279028)
chr4 (157-225)||(34849149-34849217)
chr4 (158-225)||(4866241-4866308)
chr4 (158-225)||(14239390-14239457)
chr4 (157-224)||(15069228-15069295)
chr4 (158-225)||(20309526-20309593)
chr4 (158-224)||(16815614-16815680)
chr4 (157-225)||(26460762-26460830)
chr4 (162-225)||(8542297-8542360)
chr4 (158-225)||(15375581-15375648)
chr4 (158-225)||(15395405-15395472)
chr4 (158-209)||(16472509-16472560)
chr4 (157-225)||(17242315-17242383)
chr4 (157-225)||(22726893-22726961)
chr4 (157-225)||(26406302-26406370)
chr4 (158-225)||(1896391-1896458)
chr4 (158-225)||(1910601-1910668)
chr4 (158-225)||(15085518-15085585)
chr4 (158-225)||(15220150-15220217)
chr4 (158-225)||(15238905-15238972)
chr4 (158-225)||(17087667-17087734)
chr4 (158-225)||(17095642-17095709)
chr4 (158-225)||(26138150-26138217)
chr4 (167-225)||(12786218-12786276)
chr4 (167-225)||(15298844-15298902)
chr4 (168-225)||(16244386-16244443)
chr4 (157-218)||(39166334-39166395)
chr4 (158-211)||(46660838-46660891)
chr4 (157-225)||(20757904-20757972)
chr4 (157-225)||(20764295-20764363)
[»] chr5 (54 HSPs)
chr5 (158-225)||(37651571-37651638)
chr5 (157-225)||(570176-570244)
chr5 (157-225)||(22987982-22988050)
chr5 (157-225)||(30957634-30957702)
chr5 (158-225)||(3944566-3944633)
chr5 (158-225)||(7816758-7816825)
chr5 (158-225)||(16683321-16683388)
chr5 (158-225)||(18084556-18084623)
chr5 (158-225)||(23003050-23003117)
chr5 (158-225)||(23578931-23578998)
chr5 (158-225)||(24692144-24692211)
chr5 (158-225)||(24948217-24948284)
chr5 (158-225)||(25503545-25503612)
chr5 (158-225)||(30930753-30930820)
chr5 (158-225)||(41302235-41302302)
chr5 (158-224)||(22446318-22446384)
chr5 (157-225)||(11560552-11560620)
chr5 (157-225)||(15495376-15495444)
chr5 (157-225)||(21662227-21662295)
chr5 (157-225)||(21665688-21665756)
chr5 (157-225)||(22348244-22348312)
chr5 (157-225)||(29881296-29881364)
chr5 (157-225)||(33788604-33788672)
chr5 (157-225)||(35395870-35395938)
chr5 (158-225)||(11546495-11546562)
chr5 (158-225)||(18060965-18061032)
chr5 (158-225)||(20193033-20193100)
chr5 (158-225)||(23430053-23430120)
chr5 (158-225)||(24981082-24981149)
chr5 (158-225)||(30912433-30912500)
chr5 (158-225)||(32448849-32448916)
chr5 (158-217)||(34496362-34496421)
chr5 (168-225)||(23721974-23722031)
chr5 (157-225)||(25211555-25211623)
chr5 (157-225)||(25275707-25275775)
chr5 (158-225)||(25196200-25196267)
chr5 (158-225)||(28888872-28888939)
chr5 (158-225)||(34493834-34493901)
chr5 (158-225)||(35870772-35870839)
chr5 (156-225)||(37285288-37285357)
chr5 (157-225)||(21396111-21396179)
chr5 (157-225)||(23902967-23903035)
chr5 (157-225)||(24671255-24671323)
chr5 (157-225)||(24708031-24708099)
chr5 (157-225)||(24741025-24741093)
chr5 (157-225)||(24753794-24753862)
chr5 (158-225)||(19863226-19863293)
chr5 (158-225)||(21501850-21501917)
chr5 (158-225)||(22268238-22268305)
chr5 (158-225)||(22899607-22899674)
chr5 (158-225)||(30465109-30465176)
chr5 (158-225)||(33773649-33773716)
chr5 (157-225)||(20579505-20579573)
chr5 (158-218)||(26868080-26868140)
[»] scaffold1497 (1 HSPs)
scaffold1497 (156-225)||(1205-1274)
[»] chr6 (66 HSPs)
chr6 (157-225)||(30968651-30968719)
chr6 (158-225)||(27292253-27292320)
chr6 (158-225)||(29628877-29628944)
chr6 (157-225)||(24874850-24874918)
chr6 (158-225)||(27279591-27279658)
chr6 (150-225)||(31542211-31542286)
chr6 (157-225)||(7585823-7585891)
chr6 (157-225)||(12622068-12622136)
chr6 (157-225)||(16766972-16767040)
chr6 (157-225)||(21939284-21939352)
chr6 (157-225)||(24294624-24294692)
chr6 (158-225)||(13681278-13681345)
chr6 (158-225)||(17759495-17759562)
chr6 (158-225)||(18814344-18814411)
chr6 (158-225)||(19899921-19899988)
chr6 (158-225)||(22923169-22923236)
chr6 (158-225)||(22938882-22938949)
chr6 (158-225)||(23861327-23861394)
chr6 (158-225)||(24308643-24308710)
chr6 (158-225)||(26996164-26996231)
chr6 (158-225)||(27647222-27647289)
chr6 (158-220)||(3044191-3044253)
chr6 (156-225)||(16344697-16344766)
chr6 (157-225)||(16764405-16764473)
chr6 (157-225)||(20179715-20179783)
chr6 (157-225)||(22156208-22156276)
chr6 (157-225)||(27030482-27030550)
chr6 (157-225)||(27036286-27036354)
chr6 (157-225)||(32780617-32780685)
chr6 (158-225)||(13288012-13288079)
chr6 (158-225)||(13302979-13303046)
chr6 (158-225)||(15401385-15401452)
chr6 (158-225)||(15413172-15413239)
chr6 (158-225)||(15428766-15428833)
chr6 (158-225)||(16746003-16746070)
chr6 (158-225)||(17493144-17493211)
chr6 (158-225)||(18947144-18947211)
chr6 (158-225)||(20156882-20156949)
chr6 (158-225)||(22175883-22175950)
chr6 (158-225)||(22476883-22476950)
chr6 (158-225)||(25842688-25842755)
chr6 (158-225)||(26985223-26985290)
chr6 (167-225)||(26503346-26503404)
chr6 (168-225)||(16566189-16566246)
chr6 (157-225)||(20135177-20135245)
chr6 (157-225)||(22197624-22197692)
chr6 (157-225)||(25180151-25180219)
chr6 (158-225)||(4751405-4751472)
chr6 (158-225)||(4769162-4769229)
chr6 (158-225)||(4784320-4784387)
chr6 (158-225)||(27214094-27214161)
chr6 (158-225)||(27235067-27235134)
chr6 (158-225)||(27306393-27306460)
chr6 (156-225)||(15740839-15740908)
chr6 (158-211)||(21791256-21791309)
chr6 (157-225)||(924921-924989)
chr6 (157-225)||(12963213-12963281)
chr6 (157-225)||(17086110-17086178)
chr6 (158-225)||(8723897-8723964)
chr6 (158-225)||(8766043-8766110)
chr6 (158-225)||(15996979-15997046)
chr6 (158-225)||(20425162-20425229)
chr6 (158-225)||(24377384-24377451)
chr6 (158-225)||(25807282-25807349)
chr6 (158-225)||(28196546-28196613)
chr6 (157-225)||(21995817-21995885)
[»] scaffold0131 (1 HSPs)
scaffold0131 (158-225)||(25950-26017)
[»] chr7 (51 HSPs)
chr7 (157-225)||(6222511-6222579)
chr7 (157-225)||(6179532-6179600)
chr7 (158-225)||(48217815-48217882)
chr7 (157-225)||(5801336-5801404)
chr7 (157-225)||(18458976-18459044)
chr7 (157-225)||(18627649-18627717)
chr7 (157-225)||(20593370-20593438)
chr7 (157-225)||(39861586-39861654)
chr7 (158-225)||(4186978-4187045)
chr7 (158-225)||(4949022-4949089)
chr7 (158-225)||(5246902-5246969)
chr7 (158-225)||(10920829-10920896)
chr7 (158-225)||(11413751-11413818)
chr7 (158-225)||(11428734-11428801)
chr7 (158-225)||(13735528-13735595)
chr7 (158-225)||(16497982-16498049)
chr7 (158-225)||(35972630-35972697)
chr7 (158-225)||(35994042-35994109)
chr7 (158-223)||(18623812-18623877)
chr7 (157-225)||(2971142-2971210)
chr7 (157-225)||(5169387-5169455)
chr7 (157-225)||(17079369-17079437)
chr7 (157-225)||(26749317-26749385)
chr7 (158-225)||(2150676-2150743)
chr7 (158-225)||(2165887-2165954)
chr7 (158-225)||(2969570-2969637)
chr7 (158-225)||(11361915-11361982)
chr7 (158-225)||(14224918-14224985)
chr7 (158-225)||(14929265-14929332)
chr7 (158-225)||(15352731-15352798)
chr7 (158-225)||(15918117-15918184)
chr7 (158-225)||(16522393-16522460)
chr7 (158-225)||(18138414-18138481)
chr7 (158-225)||(18430618-18430685)
chr7 (158-224)||(36878514-36878580)
chr7 (168-225)||(16507299-16507356)
chr7 (158-210)||(23957114-23957166)
chr7 (158-225)||(4779160-4779227)
chr7 (158-225)||(30309063-30309130)
chr7 (167-225)||(16453938-16453996)
chr7 (157-225)||(10852484-10852552)
chr7 (157-225)||(16438990-16439058)
chr7 (157-225)||(23765775-23765843)
chr7 (157-225)||(34195494-34195562)
chr7 (158-225)||(7369899-7369966)
chr7 (158-225)||(10838754-10838821)
chr7 (158-225)||(13894656-13894723)
chr7 (158-225)||(15004101-15004168)
chr7 (158-225)||(23231438-23231505)
chr7 (158-225)||(34195146-34195213)
chr7 (158-218)||(4055966-4056026)
[»] chr3 (76 HSPs)
chr3 (158-225)||(4450280-4450347)
chr3 (158-225)||(9531113-9531180)
chr3 (155-225)||(8278460-8278530)
chr3 (155-225)||(8307269-8307339)
chr3 (157-225)||(1732470-1732538)
chr3 (157-225)||(4695148-4695216)
chr3 (157-225)||(35835182-35835250)
chr3 (157-225)||(35891899-35891967)
chr3 (158-225)||(4685064-4685131)
chr3 (158-225)||(4800662-4800729)
chr3 (158-225)||(4883566-4883633)
chr3 (158-225)||(8305388-8305455)
chr3 (158-225)||(14451051-14451118)
chr3 (158-225)||(15745176-15745243)
chr3 (158-225)||(16062937-16063004)
chr3 (158-225)||(16418772-16418839)
chr3 (158-225)||(19273974-19274041)
chr3 (158-225)||(28165442-28165509)
chr3 (158-225)||(35565790-35565857)
chr3 (158-225)||(35876829-35876896)
chr3 (156-225)||(12956558-12956627)
chr3 (160-225)||(15896835-15896900)
chr3 (157-225)||(2000325-2000393)
chr3 (157-225)||(3392999-3393067)
chr3 (157-225)||(4446122-4446190)
chr3 (157-225)||(4732921-4732989)
chr3 (157-225)||(5663296-5663364)
chr3 (157-225)||(6213180-6213248)
chr3 (158-225)||(10423605-10423673)
chr3 (158-218)||(11260469-11260529)
chr3 (157-225)||(33687398-33687466)
chr3 (158-225)||(4717742-4717809)
chr3 (158-225)||(4785823-4785890)
chr3 (158-225)||(4889352-4889419)
chr3 (158-225)||(6188425-6188492)
chr3 (158-225)||(8226153-8226220)
chr3 (158-225)||(8292034-8292101)
chr3 (158-225)||(8300510-8300577)
chr3 (158-225)||(15881654-15881721)
chr3 (158-225)||(17905600-17905667)
chr3 (158-225)||(18003676-18003743)
chr3 (158-225)||(18047327-18047394)
chr3 (158-225)||(18063390-18063457)
chr3 (158-225)||(18326782-18326849)
chr3 (158-225)||(19929047-19929114)
chr3 (158-225)||(22117478-22117545)
chr3 (158-225)||(22640924-22640991)
chr3 (158-225)||(26825485-26825552)
chr3 (158-225)||(27929999-27930066)
chr3 (158-225)||(28360308-28360375)
chr3 (158-225)||(34799005-34799072)
chr3 (158-225)||(37184101-37184168)
chr3 (157-225)||(9721611-9721679)
chr3 (157-225)||(10608875-10608943)
chr3 (157-225)||(28013692-28013760)
chr3 (157-225)||(31025106-31025174)
chr3 (158-225)||(5647874-5647941)
chr3 (158-225)||(11646405-11646472)
chr3 (158-225)||(12338658-12338725)
chr3 (158-225)||(14141138-14141205)
chr3 (158-225)||(32963674-32963741)
chr3 (157-225)||(15372138-15372206)
chr3 (157-225)||(18928758-18928826)
chr3 (158-225)||(15363462-15363529)
chr3 (158-225)||(16630592-16630659)
chr3 (158-225)||(18526452-18526519)
chr3 (158-225)||(19369356-19369423)
chr3 (158-225)||(19627222-19627289)
chr3 (158-225)||(19705515-19705582)
chr3 (158-225)||(29943231-29943298)
chr3 (158-225)||(29992385-29992452)
chr3 (158-225)||(36130793-36130860)
chr3 (158-217)||(48462059-48462118)
chr3 (158-217)||(48477818-48477877)
chr3 (158-211)||(5205717-5205770)
chr3 (158-218)||(15475308-15475368)
[»] chr8 (41 HSPs)
chr8 (157-225)||(25052897-25052965)
chr8 (158-225)||(2126149-2126216)
chr8 (158-225)||(2141306-2141373)
chr8 (158-225)||(16265060-16265127)
chr8 (158-225)||(16273641-16273708)
chr8 (158-225)||(18801748-18801815)
chr8 (158-225)||(19649813-19649880)
chr8 (158-225)||(19660858-19660925)
chr8 (158-225)||(19665272-19665339)
chr8 (156-225)||(14358841-14358910)
chr8 (156-225)||(15211071-15211140)
chr8 (157-225)||(4819769-4819837)
chr8 (157-225)||(12479386-12479454)
chr8 (157-225)||(16253720-16253788)
chr8 (157-225)||(17903840-17903908)
chr8 (157-225)||(18692739-18692807)
chr8 (158-218)||(21376583-21376643)
chr8 (157-225)||(27597890-27597958)
chr8 (158-225)||(556237-556304)
chr8 (158-225)||(5515800-5515867)
chr8 (158-225)||(14024612-14024679)
chr8 (158-225)||(14553726-14553793)
chr8 (158-217)||(22382223-22382282)
chr8 (158-225)||(27612943-27613010)
chr8 (158-225)||(28263626-28263693)
chr8 (158-225)||(29037528-29037595)
chr8 (158-225)||(30366573-30366640)
chr8 (158-225)||(31338947-31339014)
chr8 (158-225)||(33242948-33243015)
chr8 (157-211)||(21336621-21336675)
chr8 (156-225)||(21966153-21966222)
chr8 (157-225)||(22070180-22070248)
chr8 (158-225)||(22144069-22144136)
chr8 (167-225)||(33272293-33272351)
chr8 (157-225)||(15018698-15018766)
chr8 (157-225)||(15325108-15325176)
chr8 (157-225)||(15505477-15505545)
chr8 (158-218)||(24460719-24460779)
chr8 (158-225)||(1690388-1690455)
chr8 (167-225)||(22087036-22087094)
chr8 (167-225)||(29559285-29559343)
[»] chr1 (37 HSPs)
chr1 (157-225)||(8882216-8882284)
chr1 (156-225)||(4146775-4146844)
chr1 (157-225)||(20329182-20329250)
chr1 (157-225)||(22080240-22080308)
chr1 (157-225)||(24655508-24655576)
chr1 (158-225)||(18598777-18598844)
chr1 (158-225)||(20342727-20342794)
chr1 (158-225)||(20361637-20361704)
chr1 (158-225)||(20549206-20549273)
chr1 (158-225)||(21086798-21086865)
chr1 (158-225)||(21886350-21886417)
chr1 (158-225)||(26798735-26798802)
chr1 (158-225)||(34497251-34497318)
chr1 (158-225)||(46461055-46461122)
chr1 (158-225)||(48539997-48540064)
chr1 (168-225)||(20320752-20320809)
chr1 (157-225)||(9178612-9178680)
chr1 (157-225)||(13105350-13105418)
chr1 (157-225)||(13575329-13575397)
chr1 (158-225)||(17850670-17850737)
chr1 (158-225)||(18294216-18294283)
chr1 (158-225)||(21482190-21482257)
chr1 (158-225)||(21644707-21644774)
chr1 (158-225)||(47662389-47662456)
chr1 (157-225)||(37884327-37884395)
chr1 (158-225)||(16406345-16406412)
chr1 (157-225)||(5138391-5138459)
chr1 (158-218)||(28150678-28150738)
chr1 (158-218)||(28161152-28161212)
chr1 (174-225)||(15434825-15434876)
chr1 (158-225)||(16197044-16197111)
chr1 (158-225)||(16212053-16212120)
chr1 (158-225)||(16231300-16231367)
chr1 (158-225)||(20457206-20457273)
chr1 (158-225)||(20490211-20490278)
chr1 (158-225)||(21732129-21732196)
chr1 (158-225)||(31446984-31447051)
[»] scaffold0001 (2 HSPs)
scaffold0001 (155-225)||(72174-72244)
scaffold0001 (158-225)||(443445-443512)
[»] scaffold0706 (1 HSPs)
scaffold0706 (156-225)||(83-152)
[»] chr2 (40 HSPs)
chr2 (156-225)||(12666561-12666630)
chr2 (156-225)||(39758082-39758151)
chr2 (157-225)||(20832198-20832266)
chr2 (157-225)||(37869695-37869763)
chr2 (157-225)||(40190754-40190822)
chr2 (158-225)||(4726816-4726883)
chr2 (158-225)||(13065748-13065815)
chr2 (158-225)||(17633176-17633243)
chr2 (158-225)||(20834018-20834085)
chr2 (158-225)||(26619711-26619778)
chr2 (158-225)||(27688534-27688601)
chr2 (158-225)||(40193569-40193636)
chr2 (159-225)||(12651639-12651705)
chr2 (157-225)||(5391381-5391449)
chr2 (157-225)||(28276154-28276222)
chr2 (158-225)||(8692053-8692120)
chr2 (158-225)||(22601408-22601475)
chr2 (158-225)||(23122115-23122182)
chr2 (158-225)||(23502464-23502531)
chr2 (158-225)||(26265052-26265119)
chr2 (158-225)||(27423471-27423538)
chr2 (158-225)||(28268820-28268887)
chr2 (158-225)||(30204794-30204861)
chr2 (158-225)||(32236017-32236084)
chr2 (158-225)||(34305718-34305785)
chr2 (158-225)||(40795620-40795687)
chr2 (167-225)||(26064600-26064658)
chr2 (158-225)||(18086370-18086437)
chr2 (158-225)||(27389104-27389171)
chr2 (158-225)||(27438517-27438584)
chr2 (170-225)||(28878312-28878367)
chr2 (170-225)||(28893524-28893579)
chr2 (158-225)||(34262919-34262986)
chr2 (167-225)||(19555935-19555993)
chr2 (157-225)||(15713025-15713092)
chr2 (157-225)||(29438668-29438736)
chr2 (157-225)||(30461776-30461844)
chr2 (158-225)||(18140584-18140651)
chr2 (157-225)||(21692461-21692529)
chr2 (174-218)||(27400172-27400216)
[»] scaffold0214 (1 HSPs)
scaffold0214 (157-225)||(16099-16167)
[»] scaffold0060 (1 HSPs)
scaffold0060 (157-225)||(24128-24196)
[»] scaffold0016 (1 HSPs)
scaffold0016 (157-225)||(208560-208628)
[»] scaffold1933 (1 HSPs)
scaffold1933 (158-225)||(1041-1108)
[»] scaffold0774 (1 HSPs)
scaffold0774 (158-225)||(78-145)
[»] scaffold0643 (1 HSPs)
scaffold0643 (158-225)||(1470-1537)
[»] scaffold0604 (1 HSPs)
scaffold0604 (158-225)||(9756-9823)
[»] scaffold0260 (1 HSPs)
scaffold0260 (158-225)||(5050-5117)
[»] scaffold0186 (1 HSPs)
scaffold0186 (158-225)||(12802-12869)
[»] scaffold0170 (1 HSPs)
scaffold0170 (158-225)||(3988-4055)
[»] scaffold0143 (1 HSPs)
scaffold0143 (158-225)||(23392-23459)
[»] scaffold0089 (3 HSPs)
scaffold0089 (158-225)||(10859-10926)
scaffold0089 (158-225)||(25901-25968)
scaffold0089 (158-225)||(51074-51141)
[»] scaffold0029 (1 HSPs)
scaffold0029 (158-225)||(4236-4303)
[»] scaffold0022 (1 HSPs)
scaffold0022 (158-225)||(173408-173475)
[»] scaffold0061 (1 HSPs)
scaffold0061 (159-225)||(31340-31406)
[»] scaffold0017 (1 HSPs)
scaffold0017 (159-225)||(167386-167452)
[»] scaffold1618 (1 HSPs)
scaffold1618 (156-225)||(1110-1179)
[»] scaffold0178 (1 HSPs)
scaffold0178 (156-225)||(26882-26951)
[»] scaffold0601 (1 HSPs)
scaffold0601 (157-225)||(6518-6586)
[»] scaffold0597 (2 HSPs)
scaffold0597 (157-217)||(1-61)
scaffold0597 (158-225)||(8782-8849)
[»] scaffold0338 (1 HSPs)
scaffold0338 (157-225)||(11905-11973)
[»] scaffold0328 (1 HSPs)
scaffold0328 (157-225)||(19956-20024)
[»] scaffold0161 (2 HSPs)
scaffold0161 (157-225)||(14726-14794)
scaffold0161 (157-225)||(19399-19467)
[»] scaffold0034 (1 HSPs)
scaffold0034 (157-225)||(11999-12067)
[»] scaffold0025 (1 HSPs)
scaffold0025 (157-225)||(105-173)
[»] scaffold2097 (1 HSPs)
scaffold2097 (158-225)||(525-592)
[»] scaffold1120 (1 HSPs)
scaffold1120 (158-217)||(1428-1487)
[»] scaffold0566 (1 HSPs)
scaffold0566 (158-225)||(24-91)
[»] scaffold0535 (1 HSPs)
scaffold0535 (157-224)||(6665-6732)
[»] scaffold0384 (1 HSPs)
scaffold0384 (158-225)||(16642-16709)
[»] scaffold0322 (1 HSPs)
scaffold0322 (158-225)||(18135-18202)
[»] scaffold0280 (1 HSPs)
scaffold0280 (158-225)||(22762-22829)
[»] scaffold0240 (1 HSPs)
scaffold0240 (158-225)||(19901-19968)
[»] scaffold0231 (1 HSPs)
scaffold0231 (158-225)||(25740-25807)
[»] scaffold0145 (1 HSPs)
scaffold0145 (158-225)||(34698-34765)
[»] scaffold0125 (1 HSPs)
scaffold0125 (158-225)||(149-216)
[»] scaffold0124 (1 HSPs)
scaffold0124 (158-225)||(16515-16582)
[»] scaffold0112 (1 HSPs)
scaffold0112 (158-225)||(42367-42434)
[»] scaffold0020 (1 HSPs)
scaffold0020 (158-225)||(145449-145516)
[»] scaffold0014 (1 HSPs)
scaffold0014 (158-225)||(220807-220874)
[»] scaffold0011 (1 HSPs)
scaffold0011 (158-225)||(190973-191040)
[»] scaffold0547 (1 HSPs)
scaffold0547 (158-224)||(4580-4646)
[»] scaffold1957 (1 HSPs)
scaffold1957 (157-225)||(26-94)
[»] scaffold1953 (1 HSPs)
scaffold1953 (158-218)||(1-61)
[»] scaffold1121 (1 HSPs)
scaffold1121 (157-225)||(7-75)
[»] scaffold0174 (2 HSPs)
scaffold0174 (157-225)||(2883-2951)
scaffold0174 (157-225)||(9005-9073)
[»] scaffold0530 (1 HSPs)
scaffold0530 (158-225)||(11398-11465)
[»] scaffold0206 (1 HSPs)
scaffold0206 (158-225)||(13184-13251)
[»] scaffold0109 (2 HSPs)
scaffold0109 (158-225)||(31928-31995)
scaffold0109 (158-211)||(17699-17752)
[»] scaffold0074 (1 HSPs)
scaffold0074 (158-225)||(11564-11631)
[»] scaffold0122 (1 HSPs)
scaffold0122 (155-225)||(28273-28343)
[»] scaffold0521 (1 HSPs)
scaffold0521 (156-225)||(11868-11937)
[»] scaffold0068 (1 HSPs)
scaffold0068 (156-225)||(52756-52825)
[»] scaffold0413 (1 HSPs)
scaffold0413 (157-225)||(7591-7659)
[»] scaffold0049 (1 HSPs)
scaffold0049 (157-225)||(45013-45081)
[»] scaffold0021 (2 HSPs)
scaffold0021 (157-225)||(180755-180823)
scaffold0021 (157-225)||(99832-99900)
[»] scaffold0352 (1 HSPs)
scaffold0352 (158-225)||(18201-18268)
[»] scaffold0211 (1 HSPs)
scaffold0211 (158-225)||(10439-10506)
[»] scaffold0184 (1 HSPs)
scaffold0184 (158-225)||(26886-26953)
[»] scaffold0181 (1 HSPs)
scaffold0181 (158-225)||(24240-24307)
[»] scaffold0134 (1 HSPs)
scaffold0134 (158-225)||(28122-28189)
[»] scaffold0078 (1 HSPs)
scaffold0078 (158-225)||(45891-45958)
[»] scaffold0055 (1 HSPs)
scaffold0055 (158-225)||(6808-6875)
[»] scaffold0053 (1 HSPs)
scaffold0053 (158-225)||(35512-35579)
[»] scaffold0052 (1 HSPs)
scaffold0052 (158-225)||(77660-77727)
[»] scaffold0043 (1 HSPs)
scaffold0043 (158-225)||(96054-96121)
[»] scaffold0031 (2 HSPs)
scaffold0031 (158-225)||(120352-120419)
scaffold0031 (158-225)||(131229-131296)
[»] scaffold0393 (1 HSPs)
scaffold0393 (158-224)||(7728-7794)
[»] scaffold0196 (1 HSPs)
scaffold0196 (167-225)||(152-210)
[»] scaffold0476 (1 HSPs)
scaffold0476 (158-218)||(5-65)


Alignment Details
Target: chr4 (Bit Score: 101; Significance: 3e-50; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 39388086 - 39388222
Alignment:
Q  23 cgaccatagggaaagagagaacctaagaaatacaatcagtgattctccaaagcatacaaaatagacttgtagattgagaactta-gattatttataaata 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||| |||||||||||||||    
T  39388086 cgaccatagggaaagagagaacctaagaaatacaatcagtgattcttcaaagcatacaaaatagacgtgtagattgagaatttatgattatttataaata 39388185  T
Q  122 tttgtcgatgttatattttatttaatgtaagactctt 158  Q
    ||| | || ||||||||||||||||||| ||||||||    
T  39388186 tttattgaagttatattttatttaatgtgagactctt 39388222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 9247146 - 9247216
Alignment:
Q  155 tcttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  9247146 tcttgttatcgagattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 9247216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 40563742 - 40563673
Alignment:
Q  156 cttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  40563742 cttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 40563673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 5199308 - 5199376
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  5199308 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 5199376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 14676260 - 14676192
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  14676260 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 14676192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 22110927 - 22110995
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22110927 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22110995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 34272543 - 34272475
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  34272543 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 34272475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 40463475 - 40463543
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  40463475 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 40463543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 14658111 - 14658178
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  14658111 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 14658178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 17010182 - 17010115
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  17010182 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 17010115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 17024147 - 17024080
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  17024147 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 17024080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 18044683 - 18044616
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18044683 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18044616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 19638933 - 19639000
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19638933 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19639000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 39128568 - 39128501
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||| ||||||||    
T  39128568 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgaaaatctcta 39128501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 15195566 - 15195636
Alignment:
Q  155 tcttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||||  |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15195566 tcttgttatcacgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15195636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 5317791 - 5317723
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  5317791 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 5317723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 6556676 - 6556744
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  ||||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  6556676 ttgttataatgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 6556744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 11772583 - 11772515
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  11772583 ttgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 11772515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 13441810 - 13441742
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  13441810 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 13441742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 14657826 - 14657758
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  14657826 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 14657758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 30279028 - 30278960
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  30279028 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 30278960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 34849217 - 34849149
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  34849217 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 34849149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 4866308 - 4866241
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  4866308 tgttatcacgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgataatctcta 4866241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 14239390 - 14239457
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||| ||||||| ||||||||||||| |  ||||||||||||||||| ||| |||||||||||||    
T  14239390 tgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcgatcattgataatctcta 14239457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 15069295 - 15069228
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctct 224  Q
    ||||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| |||||    
T  15069295 ttgttatcgcgattttcgggtgtcaagtcattaattcggcttgaacctttcaatctttgatattctct 15069228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 20309593 - 20309526
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  20309593 tgttatcgcgattttcgggtgtcaagtcatatattaggcttgaacctttcaatctttgatattctcta 20309526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 16815680 - 16815614
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctct 224  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| |||||    
T  16815680 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctct 16815614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 26460762 - 26460830
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||| | |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  26460762 ttgttattgcgatttttgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 26460830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 8542297 - 8542360
Alignment:
Q  162 atcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||||||| ||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  8542297 atcgtgattttcgagtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 8542360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 15375581 - 15375648
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15375581 tgttatctggattttggggtgtcaagtcattcattaggcttgaacctttcaatctttgatattctcta 15375648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 15395405 - 15395472
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15395405 tgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15395472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 16472509 - 16472560
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaa 209  Q
    |||||||| |||||||||||||||||||| |  |||||||||||||||||||    
T  16472509 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaa 16472560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 17242383 - 17242315
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  17242383 ttgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 17242315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 22726893 - 22726961
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22726893 ttgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22726961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 26406302 - 26406370
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  26406302 ttgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 26406370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 1896458 - 1896391
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  1896458 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 1896391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 1910668 - 1910601
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  1910668 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 1910601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 15085518 - 15085585
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15085518 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15085585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 15220217 - 15220150
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15220217 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15220150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 15238972 - 15238905
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15238972 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15238905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 17087734 - 17087667
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  17087734 tgttatcacgattttagggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 17087667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 17095709 - 17095642
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  17095709 tgttatcacgattttagggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 17095642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 26138150 - 26138217
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  26138150 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 26138217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 12786276 - 12786218
Alignment:
Q  167 gattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  12786276 gattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 12786218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 15298844 - 15298902
Alignment:
Q  167 gattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15298844 gattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15298902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 16244386 - 16244443
Alignment:
Q  168 attttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16244386 attttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16244443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 39166334 - 39166395
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 218  Q
    ||||||||| |||||||||||||||| |||    ||||||||||||||||| | ||||||||    
T  39166334 ttgttatcgcgattttcgggtgtcaaatcataaattaggcttgaacctttcgaccgttgata 39166395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 46660891 - 46660838
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatc 211  Q
    |||||||  |||||| ||||||||||||| |  |||||||||||||||||||||    
T  46660891 tgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatc 46660838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 20757972 - 20757904
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  |||||||||||||||| |||| |||||| ||||||    
T  20757972 ttgttatcacgattttggggtatcaagtcattaattaggcttgaacctttaaatctttgatattctcta 20757904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 20764363 - 20764295
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  |||||||||||||||| |||| |||||| ||||||    
T  20764363 ttgttatcacgattttggggtatcaagtcattaattaggcttgaacctttaaatctttgatattctcta 20764295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 37651638 - 37651571
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37651638 tgttatcgtgattttcgggtgtcaagtcaatgattaggcttgaacctttcaatcgttgataatctcta 37651571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 570176 - 570244
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  570176 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 570244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 22987982 - 22988050
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22987982 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22988050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 30957702 - 30957634
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  30957702 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 30957634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 3944633 - 3944566
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  3944633 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 3944566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 7816825 - 7816758
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  7816825 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 7816758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 16683388 - 16683321
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16683388 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16683321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 18084623 - 18084556
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18084623 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18084556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 23003050 - 23003117
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  23003050 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 23003117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 23578931 - 23578998
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  23578931 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 23578998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 24692144 - 24692211
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24692144 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24692211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 24948284 - 24948217
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24948284 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24948217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 25503545 - 25503612
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  25503545 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 25503612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 30930820 - 30930753
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  30930820 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 30930753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 41302302 - 41302235
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  41302302 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 41302235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 22446384 - 22446318
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctct 224  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| |||||    
T  22446384 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctct 22446318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 11560620 - 11560552
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  11560620 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 11560552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 15495444 - 15495376
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||| |||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15495444 ttgttatcgcgattttcggatgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15495376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 21662295 - 21662227
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  21662295 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 21662227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 21665756 - 21665688
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  21665756 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 21665688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 22348312 - 22348244
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  22348312 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 22348244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 29881296 - 29881364
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||| || |  ||||||||||||||||||||| |||||| ||||||    
T  29881296 ttgttatcatgattttcgggtgtcaagccattaattaggcttgaacctttcaatctttgatattctcta 29881364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 33788672 - 33788604
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  33788672 ttgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 33788604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 35395870 - 35395938
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  35395870 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 35395938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 11546562 - 11546495
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  11546562 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 11546495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 18060965 - 18061032
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  18060965 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 18061032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 20193033 - 20193100
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||| |||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  20193033 tgttatcgcgattttcggatgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 20193100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 23430053 - 23430120
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  23430053 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 23430120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 24981149 - 24981082
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||| ||||||||||||||||| |||||| ||||||    
T  24981149 tgttatcgcgattttcgggtgtcaagtcattaattatgcttgaacctttcaatctttgatattctcta 24981082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 30912433 - 30912500
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  |||||| |||||||||||||| |||||| ||||||    
T  30912433 tgttatcgcgattttcgggtgtcaagtcattaattaggcatgaacctttcaatctttgatattctcta 30912500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 32448849 - 32448916
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  32448849 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 32448916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 34496362 - 34496421
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgat 217  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  34496362 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgat 34496421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 23721974 - 23722031
Alignment:
Q  168 attttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  23721974 attttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 23722031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 25211623 - 25211555
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  25211623 ttgttatcacgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 25211555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 25275775 - 25275707
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  25275775 ttgttatcacgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 25275707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 25196267 - 25196200
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  25196267 tgttatcacgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 25196200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 28888872 - 28888939
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||||||||||    
T  28888872 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatcattgataatctcta 28888939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 34493834 - 34493901
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| || ||||||||||||||||||||| |||||| ||||||    
T  34493834 tgttatcacgattttggggtatcaagtcattgattaggcttgaacctttcaatctttgatattctcta 34493901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 35870772 - 35870839
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  ||||||| |||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  35870772 tgttatcacgattttcaggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 35870839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 37285288 - 37285357
Alignment:
Q  156 cttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  37285288 cttgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 37285357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 21396179 - 21396111
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  21396179 ttgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 21396111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 23903035 - 23902967
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  23903035 ttgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 23902967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 24671255 - 24671323
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24671255 ttgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24671323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 24708031 - 24708099
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24708031 ttgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24708099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 24741025 - 24741093
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24741025 ttgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24741093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 24753794 - 24753862
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24753794 ttgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24753862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 19863226 - 19863293
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19863226 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19863293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 21501917 - 21501850
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  21501917 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 21501850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 22268238 - 22268305
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22268238 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22268305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 22899674 - 22899607
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22899674 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22899607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 30465109 - 30465176
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  30465109 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 30465176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 33773716 - 33773649
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  || |||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  33773716 tgttatcgcaatgttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 33773649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 20579505 - 20579573
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| ||||||||||||| |  || |||||||| ||||||||| |||||| ||||||    
T  20579505 ttgttatcacgattttggggtgtcaagtcattaattgggcttgaatctttcaatctttgatattctcta 20579573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 26868080 - 26868140
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 218  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| ||||||    
T  26868080 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgata 26868140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1497 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1497
Description:

Target: scaffold1497; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 1205 - 1274
Alignment:
Q  156 cttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  1205 cttgttatcgtgattttcgggtgtcaagtcaataattaggcttgaacctttcaatcgttgatagtctcta 1274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 6e-24; HSPs: 66)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 30968651 - 30968719
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||    
T  30968651 ttgttatcgtgattttcgggtgtcaagtcaatagttaggcttgaacctttcaatctttgatattctcta 30968719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 27292253 - 27292320
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||    
T  27292253 tgttatcgcgattttcgggtgtcaagtcaatgattaggcttgaacctttcaatctttgatattctcta 27292320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 29628944 - 29628877
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||| ||||||    
T  29628944 tgttatcgtgattttcgggtgtcaagtcaataattaggcttgaacctttcaatctttgatattctcta 29628877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 24874918 - 24874850
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| || ||||||||||||||||||||| |||||| ||||||    
T  24874918 ttgttatcgcgattttcgggtgtcaagtcattgattaggcttgaacctttcaatctttgatattctcta 24874850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 27279591 - 27279658
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||||||||||||||||||||||||  |||||||||||| |||||||| |||||| ||||||    
T  27279591 tgttatcgtgattttcgggtgtcaagtcaataattaggcttgaacttttcaatctttgatattctcta 27279658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 31542286 - 31542211
Alignment:
Q  150 aagactcttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||| ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  31542286 aagactattgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 31542211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 7585891 - 7585823
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  7585891 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 7585823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 12622136 - 12622068
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  12622136 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 12622068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 16766972 - 16767040
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||| |||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  16766972 ttgttatcatgattttcggatgtcaagtcattaattaggcttgaacctttcaatctttgataatctcta 16767040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 21939284 - 21939352
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  21939284 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 21939352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 24294624 - 24294692
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24294624 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24294692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 13681345 - 13681278
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  13681345 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 13681278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 17759495 - 17759562
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  17759495 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 17759562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 18814344 - 18814411
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18814344 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18814411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 19899921 - 19899988
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19899921 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19899988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 22923169 - 22923236
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22923169 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22923236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 22938882 - 22938949
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22938882 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22938949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 23861327 - 23861394
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  23861327 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 23861394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 24308643 - 24308710
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24308643 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24308710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 26996231 - 26996164
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  26996231 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 26996164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 27647289 - 27647222
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  27647289 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 27647222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 3044253 - 3044191
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataat 220  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| ||||||||    
T  3044253 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgataat 3044191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 16344697 - 16344766
Alignment:
Q  156 cttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  16344697 cttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 16344766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 16764473 - 16764405
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  16764473 ttgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 16764405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 20179783 - 20179715
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  20179783 ttgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 20179715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 22156208 - 22156276
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22156208 ttgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22156276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 27030550 - 27030482
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||| |||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  27030550 ttgttatcgcgattttcggttgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 27030482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 27036354 - 27036286
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  27036354 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 27036286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 32780617 - 32780685
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  32780617 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 32780685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 13288012 - 13288079
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  13288012 tgttatcgcgattttcgggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 13288079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 13302979 - 13303046
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  13302979 tgttatcgcgattttcgggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 13303046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 15401385 - 15401452
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||| ||||||||||||||||| |||||| ||||||    
T  15401385 tgttatcgcgattttcgggtgtcaagtcattaattatgcttgaacctttcaatctttgatattctcta 15401452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 15413172 - 15413239
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||| ||||||||||||||||| |||||| ||||||    
T  15413172 tgttatcgcgattttcgggtgtcaagtcattaattatgcttgaacctttcaatctttgatattctcta 15413239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 15428766 - 15428833
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||| ||||||||||||||||| |||||| ||||||    
T  15428766 tgttatcgcgattttcgggtgtcaagtcattaattatgcttgaacctttcaatctttgatattctcta 15428833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 16746070 - 16746003
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  16746070 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 16746003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 17493211 - 17493144
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  17493211 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 17493144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 18947211 - 18947144
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  18947211 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 18947144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 20156949 - 20156882
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  20156949 tgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 20156882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 22175883 - 22175950
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22175883 tgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22175950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 22476883 - 22476950
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22476883 tgttatcacgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22476950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 25842688 - 25842755
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  25842688 tgttatcgcgattttcgggtgtcaagtcattattttggcttgaacctttcaatctttgatattctcta 25842755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 26985290 - 26985223
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  26985290 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 26985223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 26503404 - 26503346
Alignment:
Q  167 gattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  26503404 gattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 26503346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 16566246 - 16566189
Alignment:
Q  168 attttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16566246 attttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16566189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 20135245 - 20135177
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||| ||||||||||||| |  |||||||||||||||| |||| |||||| ||||||    
T  20135245 ttgttatcttgattttggggtgtcaagtcattaattaggcttgaaccttttaatctttgatattctcta 20135177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 22197624 - 22197692
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||| ||||||||||||| |  |||||||||||||||| |||| |||||| ||||||    
T  22197624 ttgttatcttgattttggggtgtcaagtcattaattaggcttgaaccttttaatctttgatattctcta 22197692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 25180219 - 25180151
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||||||||||    
T  25180219 ttgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatcattgataatctcta 25180151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 4751405 - 4751472
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||| ||||||| |||||||||| || |  || |||||||||||||| |||||||||||||||||    
T  4751405 tgttatcttgattttggggtgtcaagccattaattgggcttgaacctttcgatcgttgataatctcta 4751472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 4769229 - 4769162
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||| ||||||| |||||||||| || |  || |||||||||||||| |||||||||||||||||    
T  4769229 tgttatcttgattttggggtgtcaagccattaattgggcttgaacctttcgatcgttgataatctcta 4769162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 4784387 - 4784320
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||| ||||||| |||||||||| || |  || |||||||||||||| |||||||||||||||||    
T  4784387 tgttatcttgattttggggtgtcaagccattaattgggcttgaacctttcgatcgttgataatctcta 4784320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 27214161 - 27214094
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    || |||||||||||||||||| |||||| ||||||    
T  27214161 tgttatcgcgattttcgggtgtcaagtcataaatttggcttgaacctttcaatctttgatattctcta 27214094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 27235067 - 27235134
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    || |||||||||||||||||| |||||| ||||||    
T  27235067 tgttatcgcgattttcgggtgtcaagtcataaatttggcttgaacctttcaatctttgatattctcta 27235134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 27306393 - 27306460
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    || |||||||||||||||||| |||||| ||||||    
T  27306393 tgttatcgcgattttcgggtgtcaagtcataaatttggcttgaacctttcaatctttgatattctcta 27306460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 15740839 - 15740908
Alignment:
Q  156 cttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15740839 cttgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15740908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 21791256 - 21791309
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatc 211  Q
    |||||||| |||||| ||||||||||||| |  |||||||||||||||||||||    
T  21791256 tgttatcgcgatttttgggtgtcaagtcattaattaggcttgaacctttcaatc 21791309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 924989 - 924921
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  924989 ttgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 924921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 12963213 - 12963281
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  12963213 ttgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 12963281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 17086110 - 17086178
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  17086110 ttgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 17086178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 8723964 - 8723897
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  8723964 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 8723897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 8766110 - 8766043
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  8766110 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 8766043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 15997046 - 15996979
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15997046 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15996979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 20425229 - 20425162
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  20425229 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 20425162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 24377451 - 24377384
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24377451 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24377384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 25807282 - 25807349
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  25807282 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 25807349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 28196546 - 28196613
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  28196546 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 28196613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 21995817 - 21995885
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  |||||||||||| |||||||| |||||| ||||||    
T  21995817 ttgttatctcgattttggggtatcaagtcattaattaggcttgaacatttcaatctttgatattctcta 21995885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 26017 - 25950
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  26017 tgttatcgtgattttcgggtgtcaagtcaataattaggcttgaacctttcaatcgttgatagtctcta 25950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 6222511 - 6222579
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||    
T  6222511 ttgttatcgcgattttcgggtgtcaagtcattgattaggcttgaacctttcaatctttgataatctcta 6222579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 6179600 - 6179532
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  6179600 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgataatctcta 6179532  T

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Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 48217882 - 48217815
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  48217882 tgttatcgtgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 48217815  T

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Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 5801336 - 5801404
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  5801336 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 5801404  T

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Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 18458976 - 18459044
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18458976 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18459044  T

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Target: chr7; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 18627717 - 18627649
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18627717 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18627649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 20593438 - 20593370
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  20593438 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 20593370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 39861586 - 39861654
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  39861586 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 39861654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 4187045 - 4186978
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  4187045 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 4186978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 4949089 - 4949022
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||| || |  ||||||||||||||||||||| |||||||||||||    
T  4949089 tgttatcgcgattttcgggtgtcaagccattaattaggcttgaacctttcaatctttgataatctcta 4949022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 5246969 - 5246902
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  5246969 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 5246902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 10920829 - 10920896
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  10920829 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 10920896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 11413751 - 11413818
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  11413751 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 11413818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 11428734 - 11428801
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  11428734 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 11428801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 13735528 - 13735595
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  13735528 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 13735595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 16497982 - 16498049
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16497982 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16498049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 35972697 - 35972630
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  35972697 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 35972630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 35994109 - 35994042
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  35994109 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 35994042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 18623877 - 18623812
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctc 223  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||    
T  18623877 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctc 18623812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 2971210 - 2971142
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  2971210 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 2971142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 5169455 - 5169387
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  5169455 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 5169387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 17079369 - 17079437
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  17079369 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 17079437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 26749317 - 26749385
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  26749317 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 26749385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 2150743 - 2150676
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  2150743 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 2150676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 2165954 - 2165887
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  2165954 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 2165887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 2969637 - 2969570
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  2969637 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 2969570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 11361982 - 11361915
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  11361982 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 11361915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 14224918 - 14224985
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  14224918 tgttatcacgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 14224985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 14929265 - 14929332
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||| ||| |  ||||||||||||||||||||| |||||| ||||||    
T  14929265 tgttatcgcgattttcgggtgtcaattcattaattaggcttgaacctttcaatctttgatattctcta 14929332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 15352731 - 15352798
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||| ||| |  ||||||||||||||||||||| |||||| ||||||    
T  15352731 tgttatcgcgattttcgggtgtcaattcattaattaggcttgaacctttcaatctttgatattctcta 15352798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 15918117 - 15918184
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||| ||| |  ||||||||||||||||||||| |||||| ||||||    
T  15918117 tgttatcgcgattttcgggtgtcaaatcattaattaggcttgaacctttcaatctttgatattctcta 15918184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 16522393 - 16522460
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16522393 tgttatcacgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16522460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 18138481 - 18138414
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  18138481 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 18138414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 18430685 - 18430618
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18430685 tgttatcacgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18430618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 36878514 - 36878580
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctct 224  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| |||||    
T  36878514 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctct 36878580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 16507299 - 16507356
Alignment:
Q  168 attttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16507299 attttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16507356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 23957114 - 23957166
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaat 210  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||    
T  23957114 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaat 23957166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 4779227 - 4779160
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||| ||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  4779227 tgttatcgcgatttttgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 4779160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 30309130 - 30309063
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||| | ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  30309130 tgttattgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 30309063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 16453938 - 16453996
Alignment:
Q  167 gattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||| |||| |||||||| |  ||||||||||||||||||||| |||||||||||||    
T  16453938 gattttggggtatcaagtcattaattaggcttgaacctttcaatcattgataatctcta 16453996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 10852552 - 10852484
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  10852552 ttgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 10852484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 16438990 - 16439058
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  |||| |||||||||||||||| |||||||||||||    
T  16438990 ttgttatctcgattttggggtatcaagtcattaattagacttgaacctttcaatcattgataatctcta 16439058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 23765843 - 23765775
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  23765843 ttgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 23765775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 34195494 - 34195562
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  34195494 ttgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 34195562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 7369966 - 7369899
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  7369966 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 7369899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 10838754 - 10838821
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  10838754 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 10838821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 13894656 - 13894723
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  13894656 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 13894723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 15004101 - 15004168
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15004101 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15004168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 23231505 - 23231438
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  ||||||  ||| |||||||| |  ||||||||||||||||||||| |||||||||||||    
T  23231505 tgttatcacgattttgaggtatcaagtcattaattaggcttgaacctttcaatctttgataatctcta 23231438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 34195213 - 34195146
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  34195213 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 34195146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 4056026 - 4055966
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 218  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| ||||||    
T  4056026 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgata 4055966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 6e-21; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 4450347 - 4450280
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||    
T  4450347 tgttatcgcgattttcgggtgtcaagtcaatgattaggcttgaacctttcaatctttgatattctcta 4450280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 9531180 - 9531113
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||    
T  9531180 tgttatcacgattttcgggtgtcaagtcattgattaggcttgaacctttcaatctttgataatctcta 9531113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 8278460 - 8278530
Alignment:
Q  155 tcttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  8278460 tcttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 8278530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 8307269 - 8307339
Alignment:
Q  155 tcttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  8307269 tcttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 8307339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 1732470 - 1732538
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  1732470 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 1732538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 4695216 - 4695148
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  4695216 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 4695148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 35835250 - 35835182
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  35835250 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 35835182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 35891967 - 35891899
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  35891967 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 35891899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 4685131 - 4685064
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  4685131 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 4685064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 4800662 - 4800729
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  4800662 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 4800729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 4883633 - 4883566
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  4883633 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 4883566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 8305388 - 8305455
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  8305388 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 8305455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 14451051 - 14451118
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  14451051 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 14451118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 15745176 - 15745243
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15745176 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15745243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 16062937 - 16063004
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16062937 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16063004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 16418772 - 16418839
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16418772 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16418839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 19274041 - 19273974
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19274041 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19273974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 28165442 - 28165509
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  28165442 tgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcaatcattgataatctcta 28165509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 35565790 - 35565857
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  35565790 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 35565857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 35876896 - 35876829
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  35876896 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 35876829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 12956558 - 12956627
Alignment:
Q  156 cttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  12956558 cttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 12956627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 15896835 - 15896900
Alignment:
Q  160 ttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15896835 ttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15896900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 2000393 - 2000325
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  2000393 ttgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 2000325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 3393067 - 3392999
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  3393067 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 3392999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 4446190 - 4446122
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  4446190 ttgttatcgcgattttcgggtgtcaagtcatatattaggcttgaacctttcaatctttgatattctcta 4446122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 4732989 - 4732921
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  4732989 ttgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 4732921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 5663364 - 5663296
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  5663364 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 5663296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 6213248 - 6213180
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  6213248 ttgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 6213180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 10423673 - 10423605
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggtta-ggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| || ||  |||||||||||||||||| |||||||||||||    
T  10423673 tgttatcgcgattttcgggtgtcaagtcattgattttggcttgaacctttcaatctttgataatctcta 10423605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 11260469 - 11260529
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 218  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| ||||||    
T  11260469 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgata 11260529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 33687466 - 33687398
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  |||||||||||||||||||||  ||||| ||||||    
T  33687466 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctctgatattctcta 33687398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 4717809 - 4717742
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  4717809 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 4717742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 4785823 - 4785890
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||| |||| |  ||||||||||||||||||||| |||||| ||||||    
T  4785823 tgttatcgcgattttcgggtgtcaggtcattaattaggcttgaacctttcaatctttgatattctcta 4785890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 4889419 - 4889352
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  ||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  4889419 tgttatcgcaattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 4889352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 6188492 - 6188425
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  6188492 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 6188425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 8226153 - 8226220
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  8226153 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 8226220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 8292101 - 8292034
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  8292101 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 8292034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 8300577 - 8300510
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  8300577 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 8300510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 15881654 - 15881721
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||  |||||| ||||||    
T  15881654 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatttttgatattctcta 15881721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 17905667 - 17905600
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  17905667 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 17905600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 18003743 - 18003676
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  18003743 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 18003676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 18047394 - 18047327
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  18047394 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 18047327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 18063457 - 18063390
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  18063457 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 18063390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 18326849 - 18326782
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  18326849 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 18326782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 19929114 - 19929047
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  19929114 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 19929047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 22117478 - 22117545
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| | |||| ||||||    
T  22117478 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatcttcgatattctcta 22117545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 22640924 - 22640991
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||| ||||||||| |||||| ||||||    
T  22640924 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaatctttcaatctttgatattctcta 22640991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 26825485 - 26825552
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||| ||||||||||||||| |||||| ||||||    
T  26825485 tgttatcgcgattttcgggtgtcaagtcattaattaggtttgaacctttcaatctttgatattctcta 26825552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 27929999 - 27930066
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  27929999 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 27930066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 28360375 - 28360308
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  28360375 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 28360308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 34799005 - 34799072
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||| ||| |  ||||||||||||||||||||| |||||| ||||||    
T  34799005 tgttatcgcgattttcgggtgtcaaatcattaattaggcttgaacctttcaatctttgatattctcta 34799072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 37184101 - 37184168
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  ||||||||| |||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  37184101 tgttatcacgattttcggatgtcaagtcattaattaggcttgaacctttcaatctttgataatctcta 37184168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 9721611 - 9721679
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||| ||||||||||| |||||| ||||||    
T  9721611 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttggacctttcaatctttgatattctcta 9721679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 10608943 - 10608875
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||| ||||||    ||||||||||||||||||||| |||||| ||||||    
T  10608943 ttgttatcgcgattttcgggtgttaagtcataaattaggcttgaacctttcaatctttgatattctcta 10608875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 28013760 - 28013692
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||| | |  || |||||||||||||||||| |||||| ||||||    
T  28013760 ttgttatcgcgattttcgggtgtcaagttattaatttggcttgaacctttcaatctttgatattctcta 28013692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 31025106 - 31025174
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||| |||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  31025106 ttgtcatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 31025174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 5647941 - 5647874
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||| ||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  5647941 tgttatcgcgattttcggatgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 5647874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 11646405 - 11646472
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  11646405 tgttatcacgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 11646472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 12338725 - 12338658
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||| ||||||| |||| |||||| | |  ||||||||||||||||||||| |||||||||||||    
T  12338725 tgttatcttgattttagggtatcaagttattaattaggcttgaacctttcaatctttgataatctcta 12338658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 14141138 - 14141205
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||||||||||    
T  14141138 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatcattgataatctcta 14141205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 32963674 - 32963741
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||  ||||||||||||||||| |||||| ||||||    
T  32963674 tgttatcgcgattttcgggtgtcaagtcattaatttagcttgaacctttcaatctttgatattctcta 32963741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 15372206 - 15372138
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||| |||| |||||||| |  ||||||||||||||| ||||| |||||| ||||||    
T  15372206 ttgttatcatgattttggggtatcaagtcattaattaggcttgaaccttccaatctttgatattctcta 15372138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 18928826 - 18928758
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18928826 ttgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18928758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 15363462 - 15363529
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15363462 tgttatcacgattttggggtatcaagtcattatttaggcttgaacctttcaatctttgatattctcta 15363529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 16630592 - 16630659
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16630592 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16630659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 18526519 - 18526452
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18526519 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18526452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 19369356 - 19369423
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| || |||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19369356 tgttatctcgattttgggatgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19369423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 19627222 - 19627289
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19627222 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19627289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 19705582 - 19705515
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19705582 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19705515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 29943298 - 29943231
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  29943298 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 29943231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 29992452 - 29992385
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  29992452 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 29992385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 36130793 - 36130860
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  36130793 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 36130860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 48462118 - 48462059
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgat 217  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||| | |||||||    
T  48462118 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcgaccgttgat 48462059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 48477877 - 48477818
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgat 217  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||| | |||||||    
T  48477877 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcgaccgttgat 48477818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 5205770 - 5205717
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatc 211  Q
    ||||||| |||||||||||||||||| || || || | ||||||||||||||||    
T  5205770 tgttatcttgattttcgggtgtcaagccattgattggacttgaacctttcaatc 5205717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 15475308 - 15475368
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 218  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| ||||||    
T  15475308 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgata 15475368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 25052897 - 25052965
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||||| ||||||    
T  25052897 ttgttatcgcgattttcgggtgtcaagtcaataattaggcttgaacctttcaatctttgatattctcta 25052965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 2126149 - 2126216
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  2126149 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 2126216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 2141306 - 2141373
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  2141306 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 2141373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 16265127 - 16265060
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16265127 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16265060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 16273708 - 16273641
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16273708 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16273641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 18801815 - 18801748
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18801815 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18801748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 19649813 - 19649880
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19649813 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19649880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 19660858 - 19660925
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19660858 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19660925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 19665339 - 19665272
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19665339 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19665272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 14358841 - 14358910
Alignment:
Q  156 cttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||| |||||||||||||||||||| |  |||||||| |||||||||||| |||||| ||||||    
T  14358841 cttgttatcgcgattttcgggtgtcaagtcattaattaggcttaaacctttcaatctttgatattctcta 14358910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 15211140 - 15211071
Alignment:
Q  156 cttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  15211140 cttgttatcgcgattttcgggtgtcaagtcataatttaggcttgaacctttcaatctttgatattctcta 15211071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 4819769 - 4819837
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  4819769 ttgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 4819837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 12479386 - 12479454
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  12479386 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 12479454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 16253720 - 16253788
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  16253720 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 16253788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 17903908 - 17903840
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  17903908 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 17903840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 18692739 - 18692807
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  18692739 ttgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 18692807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 21376583 - 21376643
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 218  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| ||||||    
T  21376583 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgata 21376643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 27597890 - 27597958
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  27597890 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 27597958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 556304 - 556237
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  556304 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 556237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 5515800 - 5515867
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  5515800 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 5515867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 14024612 - 14024679
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  14024612 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 14024679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 14553793 - 14553726
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  14553793 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 14553726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 22382223 - 22382282
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgat 217  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  22382223 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgat 22382282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 27612943 - 27613010
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  27612943 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 27613010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 28263693 - 28263626
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  28263693 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 28263626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 29037595 - 29037528
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  | ||||||||||||||||||| |||||| ||||||    
T  29037595 tgttatcgcgattttcgggtgtcaagtcattaataaggcttgaacctttcaatctttgatattctcta 29037528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 30366573 - 30366640
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  |||| |||||||||||||||| |||||| ||||||    
T  30366573 tgttatcgcgattttcgggtgtcaagtcattaattagacttgaacctttcaatctttgatattctcta 30366640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 31338947 - 31339014
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  31338947 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 31339014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 33243015 - 33242948
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  33243015 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 33242948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 21336621 - 21336675
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatc 211  Q
    ||||||||| |||||||||||||||||||| |  |||||||||||||||||||||    
T  21336621 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatc 21336675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 21966222 - 21966153
Alignment:
Q  156 cttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  21966222 cttgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 21966153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 22070180 - 22070248
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22070180 ttgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22070248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 22144136 - 22144069
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||| ||||||||||||| |  ||||| ||||||||||||||| |||||| ||||||    
T  22144136 tgttatcgcgatttttgggtgtcaagtcattaattaggtttgaacctttcaatctttgatattctcta 22144069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 33272351 - 33272293
Alignment:
Q  167 gattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  33272351 gattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 33272293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 15018766 - 15018698
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15018766 ttgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15018698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 15325176 - 15325108
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||| ||||||||||| |    ||||||||||||||||||||| |||||| ||||||    
T  15325176 ttgttatcgcgatttttgggtgtcaagttataaattaggcttgaacctttcaatctttgatattctcta 15325108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 15505545 - 15505477
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||| ||||||||||| |    ||||||||||||||||||||| |||||| ||||||    
T  15505545 ttgttatcgcgatttttgggtgtcaagttataaattaggcttgaacctttcaatctttgatattctcta 15505477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 24460719 - 24460779
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 218  Q
    |||||||  |||||||||||||||||| | |  ||||||||||||||||||||| ||||||    
T  24460719 tgttatcacgattttcgggtgtcaagttattaattaggcttgaacctttcaatctttgata 24460779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 1690455 - 1690388
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  1690455 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 1690388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 22087036 - 22087094
Alignment:
Q  167 gattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||| ||||||||||||| |  |||| |||||||||||||||| |||||| ||||||    
T  22087036 gattttggggtgtcaagtcattaattagacttgaacctttcaatctttgatattctcta 22087094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 29559285 - 29559343
Alignment:
Q  167 gattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  29559285 gattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 29559343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 8882216 - 8882284
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  8882216 ttgttatcgtgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 8882284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 4146775 - 4146844
Alignment:
Q  156 cttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  4146775 cttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 4146844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 20329182 - 20329250
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  20329182 ttgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgataatctcta 20329250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 22080240 - 22080308
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  22080240 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 22080308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 24655576 - 24655508
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24655576 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24655508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 18598844 - 18598777
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18598844 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18598777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 20342727 - 20342794
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  20342727 tgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgataatctcta 20342794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 20361637 - 20361704
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  20361637 tgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcaatcattgataatctcta 20361704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 20549273 - 20549206
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  20549273 tgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcaatcattgataatctcta 20549206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 21086865 - 21086798
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  21086865 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 21086798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 21886350 - 21886417
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  21886350 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 21886417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 26798802 - 26798735
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  26798802 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 26798735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 34497318 - 34497251
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  34497318 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 34497251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 46461122 - 46461055
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  46461122 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 46461055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 48539997 - 48540064
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  48539997 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 48540064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 20320752 - 20320809
Alignment:
Q  168 attttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  20320752 attttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgataatctcta 20320809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 9178612 - 9178680
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  9178612 ttgttatctcgattttggggtgtcaagtcattaattaggcttgaacctttcaatcattgataatctcta 9178680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 13105350 - 13105418
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||  ||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  13105350 ttgttatcgcaattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 13105418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 13575329 - 13575397
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  13575329 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 13575397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 17850737 - 17850670
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  17850737 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 17850670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 18294283 - 18294216
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  18294283 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 18294216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 21482257 - 21482190
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||| ||||||||||||||||| |||||| ||||||    
T  21482257 tgttatcgcgattttcgggtgtcaagtcattaattatgcttgaacctttcaatctttgatattctcta 21482190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 21644707 - 21644774
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  21644707 tgttatcacgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 21644774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 47662389 - 47662456
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  47662389 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 47662456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 37884327 - 37884395
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||| | |  || |||||||||||||||||| |||||| ||||||    
T  37884327 ttgttatcgcgattttcgggtgtcaagttattaatttggcttgaacctttcaatctttgatattctcta 37884395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 16406412 - 16406345
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||||||||||    
T  16406412 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatcattgataatctcta 16406345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 5138459 - 5138391
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  5138459 ttgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 5138391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 28150738 - 28150678
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 218  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||| | ||||||||    
T  28150738 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcgaccgttgata 28150678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 28161212 - 28161152
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 218  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||| | ||||||||    
T  28161212 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcgaccgttgata 28161152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 15434876 - 15434825
Alignment:
Q  174 gggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  15434876 gggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 15434825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 16197044 - 16197111
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16197044 tgttatcccgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16197111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 16212053 - 16212120
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16212053 tgttatcccgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16212120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 16231367 - 16231300
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16231367 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16231300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 20457273 - 20457206
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  20457273 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 20457206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 20490278 - 20490211
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  20490278 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 20490211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 21732196 - 21732129
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  21732196 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 21732129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 31446984 - 31447051
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||| ||||||||||||||| |||||||||||||    
T  31446984 tgttatcacgattttggggtatcaagtcattatttaggtttgaacctttcaatctttgataatctcta 31447051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 72174 - 72244
Alignment:
Q  155 tcttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  72174 tcttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 72244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 443445 - 443512
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  443445 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 443512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 152 - 83
Alignment:
Q  156 cttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  152 cttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 83  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 12666630 - 12666561
Alignment:
Q  156 cttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  12666630 cttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 12666561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 39758151 - 39758082
Alignment:
Q  156 cttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  39758151 cttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 39758082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 20832266 - 20832198
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  20832266 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 20832198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 37869695 - 37869763
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  37869695 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 37869763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 40190754 - 40190822
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  40190754 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 40190822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 4726816 - 4726883
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  4726816 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 4726883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 13065815 - 13065748
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  13065815 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 13065748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 17633243 - 17633176
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||| ||| |  ||||||||||||||||||||| |||||||||||||    
T  17633243 tgttatcgcgattttcgggtgtcaaatcattaattaggcttgaacctttcaatctttgataatctcta 17633176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 20834085 - 20834018
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  20834085 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 20834018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 26619711 - 26619778
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  26619711 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 26619778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 27688601 - 27688534
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  27688601 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 27688534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 40193569 - 40193636
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  40193569 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 40193636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 12651705 - 12651639
Alignment:
Q  159 gttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  12651705 gttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 12651639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 5391381 - 5391449
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  5391381 ttgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 5391449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 28276222 - 28276154
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  28276222 ttgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 28276154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 8692053 - 8692120
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  8692053 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 8692120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 22601408 - 22601475
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  22601408 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 22601475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 23122182 - 23122115
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  23122182 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 23122115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 23502464 - 23502531
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  23502464 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 23502531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 26265052 - 26265119
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||| ||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  26265052 tgttgtcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 26265119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 27423471 - 27423538
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  27423471 tgttatcgcgattttcgggtgtcaagtcattaattgggcttgaacctttcaatctttgatattctcta 27423538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 28268820 - 28268887
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  28268820 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 28268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 30204794 - 30204861
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||| ||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  30204794 tgttatcgcgattttcgggtgccaagtcattaattaggcttgaacctttcaatctttgatattctcta 30204861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 32236017 - 32236084
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||| ||||||||||||| |||||| ||||||    
T  32236017 tgttatcgcgattttcgggtgtcaagtcattaattaggctcgaacctttcaatctttgatattctcta 32236084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 34305718 - 34305785
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  34305718 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 34305785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 40795687 - 40795620
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  40795687 tgttatcacgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 40795620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 26064600 - 26064658
Alignment:
Q  167 gattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  26064600 gattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 26064658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 18086437 - 18086370
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||||||||||    
T  18086437 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgataatctcta 18086370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 27389171 - 27389104
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  27389171 tgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 27389104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 27438517 - 27438584
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||| ||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  27438517 tgttatcgcgatttttgggtgtcaagtcattaattgggcttgaacctttcaatctttgatattctcta 27438584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 28878367 - 28878312
Alignment:
Q  170 tttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  28878367 tttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 28878312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 28893579 - 28893524
Alignment:
Q  170 tttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  28893579 tttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 28893524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 34262919 - 34262986
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||| ||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  34262919 tgttatcgcgattttcggatgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 34262986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 19555935 - 19555993
Alignment:
Q  167 gattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  19555935 gattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 19555993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 15713025 - 15713092
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||| |||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  15713025 ttgttatcgcgattt-cgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 15713092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 29438668 - 29438736
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| || ||||||||||    
T  29438668 ttgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatcatttataatctcta 29438736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 30461844 - 30461776
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  30461844 ttgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 30461776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 18140651 - 18140584
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18140651 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18140584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 21692461 - 21692529
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||  |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  21692461 ttgttatcacgatttcggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 21692529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 27400216 - 27400172
Alignment:
Q  174 gggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 218  Q
    ||||||||||||| |  ||||||||||||||||||||| ||||||    
T  27400216 gggtgtcaagtcattaattaggcttgaacctttcaatctttgata 27400172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 16167 - 16099
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16167 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 24128 - 24196
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24128 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 208560 - 208628
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  208560 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 208628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1933 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1933
Description:

Target: scaffold1933; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 1041 - 1108
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  1041 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 1108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 145 - 78
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  145 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 78  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0643 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 1470 - 1537
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  1470 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 1537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 9756 - 9823
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  9756 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 9823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 5050 - 5117
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||| ||||||| ||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  5050 tgttatcttgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgataatctcta 5117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 12802 - 12869
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  12802 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 12869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 4055 - 3988
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  4055 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 3988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 23459 - 23392
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  23459 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 23392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 44; Significance: 4e-16; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 10859 - 10926
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  10859 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 10926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 25968 - 25901
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  25968 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 25901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 51074 - 51141
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  51074 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 51141  T

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Target: scaffold0029 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 4236 - 4303
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  4236 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 4303  T

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Target: scaffold0022 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 173475 - 173408
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  173475 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 173408  T

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Target: scaffold0061 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 31340 - 31406
Alignment:
Q  159 gttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  31340 gttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 31406  T

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Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 167452 - 167386
Alignment:
Q  159 gttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  167452 gttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 167386  T

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Target: scaffold1618 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1618
Description:

Target: scaffold1618; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 1110 - 1179
Alignment:
Q  156 cttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  1110 cttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 1179  T

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Target: scaffold0178 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 26882 - 26951
Alignment:
Q  156 cttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  26882 cttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 26951  T

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Target: scaffold0601 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 6518 - 6586
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||| |||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  6518 ttgttatcgcgattttccggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 6586  T

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Target: scaffold0597 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 61 - 1
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgat 217  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  61 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgat 1  T

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Target: scaffold0597; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 8849 - 8782
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  8849 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 8782  T

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Target: scaffold0338 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 11905 - 11973
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||||| |  |||||||||||||||||||||  ||||| ||||||    
T  11905 ttgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctctgatattctcta 11973  T

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Target: scaffold0328 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 19956 - 20024
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  19956 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 20024  T

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Target: scaffold0161 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 14726 - 14794
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  14726 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 14794  T

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Target: scaffold0161; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 19399 - 19467
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  19399 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 19467  T

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Target: scaffold0034 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 11999 - 12067
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  11999 ttgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 12067  T

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Target: scaffold0025 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 173 - 105
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| |||||||||||||||||| | |  ||||||||||||||||||||| |||||| ||||||    
T  173 ttgttatcgcgattttcgggtgtcaagttattaattaggcttgaacctttcaatctttgatattctcta 105  T

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Target: scaffold2097 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold2097
Description:

Target: scaffold2097; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 592 - 525
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  592 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 525  T

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Target: scaffold1120 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1120
Description:

Target: scaffold1120; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 1428 - 1487
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgat 217  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  1428 tgttatcgcgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgat 1487  T

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Target: scaffold0566 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 91 - 24
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||| ||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  91 tgttatcgcgattctcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24  T

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Target: scaffold0535 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 6665 - 6732
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctct 224  Q
    ||||||||  |||||||||||||||||||| |  ||||||||||||||||||||| |||||| |||||    
T  6665 ttgttatcacgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctct 6732  T

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Target: scaffold0384 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 16642 - 16709
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  16642 tgttatcacgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 16709  T

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Target: scaffold0322 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 18202 - 18135
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18202 tgttatcgcgattttcgggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18135  T

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Target: scaffold0280 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 22829 - 22762
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  22829 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 22762  T

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Target: scaffold0240 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 19901 - 19968
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  19901 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 19968  T

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Target: scaffold0231 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 25740 - 25807
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||| ||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  25740 tgttatcgcgattttcgggcgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 25807  T

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Target: scaffold0145 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 34765 - 34698
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  || |||||||||||||||||| |||||| ||||||    
T  34765 tgttatcgcgattttcgggtgtcaagtcattaatttggcttgaacctttcaatctttgatattctcta 34698  T

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Target: scaffold0125 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 216 - 149
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  216 tgttatcgcgattttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 149  T

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Target: scaffold0124 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 16582 - 16515
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  16582 tgttatcgcgattttcgggtgtcaagtcataatttaggcttgaacctttcaatctttgatattctcta 16515  T

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Target: scaffold0112 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 42367 - 42434
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  | ||||||||||||||||||| |||||| ||||||    
T  42367 tgttatcgcgattttcgggtgtcaagtcattaatcaggcttgaacctttcaatctttgatattctcta 42434  T

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Target: scaffold0020 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 145449 - 145516
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||||||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  145449 tgttatcacgattttcgggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 145516  T

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Target: scaffold0014 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 220807 - 220874
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||| ||||||||||||||| |||||| ||||||    
T  220807 tgttatcgcgattttcgggtgtcaagtcattaattagggttgaacctttcaatctttgatattctcta 220874  T

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Target: scaffold0011 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 191040 - 190973
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| |||||||||||||||||||| |  ||||||| ||||||||||||| |||||| ||||||    
T  191040 tgttatcgcgattttcgggtgtcaagtcattaattaggctggaacctttcaatctttgatattctcta 190973  T

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Target: scaffold0547 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 4580 - 4646
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctct 224  Q
    |||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| |||||    
T  4580 tgttatcgcgattttcgggtgtcaagtcatgaattaggcttgaacctttcaatctttgatattctct 4646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1957 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1957
Description:

Target: scaffold1957; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 94 - 26
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||| || |||||||||||||||||    ||||||||||||||||||||| |||||| ||||||    
T  94 ttgttatcgcgactttcgggtgtcaagtcataaattaggcttgaacctttcaatctttgatattctcta 26  T

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Target: scaffold1953 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1953
Description:

Target: scaffold1953; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 61 - 1
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 218  Q
    ||||||| |||||||| |||||||||||| |  ||||||||||||||||||||| ||||||    
T  61 tgttatcatgattttcaggtgtcaagtcattaattaggcttgaacctttcaatctttgata 1  T

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Target: scaffold1121 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1121
Description:

Target: scaffold1121; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 75 - 7
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  75 ttgttatcatgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 7  T

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Target: scaffold0174 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 2951 - 2883
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  2951 ttgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 2883  T

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Target: scaffold0174; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 9073 - 9005
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  9073 ttgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 9005  T

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Target: scaffold0530 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 11398 - 11465
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  11398 tgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 11465  T

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Target: scaffold0206 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 13251 - 13184
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  13251 tgttatcacgattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 13184  T

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Target: scaffold0109 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 31995 - 31928
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  31995 tgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 31928  T

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Target: scaffold0109; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 17752 - 17699
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatc 211  Q
    |||||||  |||||| ||||||||||||| |  |||||||||||||||||||||    
T  17752 tgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatc 17699  T

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Target: scaffold0074 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 11564 - 11631
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  11564 tgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatctttgatattctcta 11631  T

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Target: scaffold0122 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 28343 - 28273
Alignment:
Q  155 tcttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  28343 tcttgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 28273  T

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Target: scaffold0521 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 11868 - 11937
Alignment:
Q  156 cttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  11868 cttgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 11937  T

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Target: scaffold0068 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 52756 - 52825
Alignment:
Q  156 cttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||||| ||||||||||||||||||||    |||||| ||||| |||||||| |||||| ||||||    
T  52756 cttgttatcgcgattttcgggtgtcaagtcataaattaggcatgaacatttcaatctttgatattctcta 52825  T

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Target: scaffold0413 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 7659 - 7591
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| ||||||||||||| |  ||||||||||||||||||||| || ||| ||||||    
T  7659 ttgttatctggattttggggtgtcaagtcattaattaggcttgaacctttcaatcttttatattctcta 7591  T

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Target: scaffold0049 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 45081 - 45013
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  45081 ttgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 45013  T

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Target: scaffold0021 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 180823 - 180755
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  180823 ttgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 180755  T

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Target: scaffold0021; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 99900 - 99832
Alignment:
Q  157 ttgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    ||||||||  |||||| |||| |||||||| |  |||||||||||| |||||||| |||||| ||||||    
T  99900 ttgttatcacgattttggggtatcaagtcattaattaggcttgaacgtttcaatctttgatattctcta 99832  T

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Target: scaffold0352 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 18201 - 18268
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  18201 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 18268  T

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Target: scaffold0211 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 10439 - 10506
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  10439 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 10506  T

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Target: scaffold0184 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 26953 - 26886
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  26953 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 26886  T

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Target: scaffold0181 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 24307 - 24240
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  24307 tgttatcccgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 24240  T

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Target: scaffold0134 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 28189 - 28122
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  28189 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 28122  T

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Target: scaffold0078 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 45891 - 45958
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  45891 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 45958  T

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Target: scaffold0055 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 6808 - 6875
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  6808 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 6875  T

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Target: scaffold0053 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 35512 - 35579
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||| ||||||||||||||||||||    |||||| ||||| |||||||| |||||| ||||||    
T  35512 tgttatcgcgattttcgggtgtcaagtcataaattaggcatgaacatttcaatctttgatattctcta 35579  T

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Target: scaffold0052 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 77727 - 77660
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  77727 tgttatctcgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 77660  T

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Target: scaffold0043 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 96054 - 96121
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  96054 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 96121  T

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Target: scaffold0031 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 120419 - 120352
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  120419 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 120352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 131296 - 131229
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  131296 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 131229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 7794 - 7728
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctct 224  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| |||||    
T  7794 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctct 7728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 210 - 152
Alignment:
Q  167 gattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgataatctcta 225  Q
    |||||| |||| |||||||| |  ||||||||||||||||||||| |||||| ||||||    
T  210 gattttggggtatcaagtcattaattaggcttgaacctttcaatctttgatattctcta 152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 65 - 5
Alignment:
Q  158 tgttatcgtgattttcgggtgtcaagtcaatggttaggcttgaacctttcaatcgttgata 218  Q
    |||||||  |||||| |||| |||||||| |  ||||||||||||||||||||| ||||||    
T  65 tgttatcacgattttggggtatcaagtcattaattaggcttgaacctttcaatctttgata 5  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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