View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11385A_low_269 (Length: 234)
Name: NF11385A_low_269
Description: NF11385A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11385A_low_269 |
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Alignment Details
Target: chr8 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 40289020 - 40288838
Alignment:
| Q |
21 |
cagaaacaccatcagccttgacaaacttgggtaacccatcagacaaaccacgagcaaagccaggctgagtttgtacacgaactttgactgcctccatagg |
120 |
Q |
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| T |
40289020 |
cagaaacaccatcagccttgacaaacttgggtaacccatcagacaaaccacgagcaaagccaggctgagtttgtacacgaactttgacagcctccatagg |
40288921 |
T |
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| Q |
121 |
acaaagtgcacaatcagcaataacttctgctgaagcagaaccagctagatatatgaaagttttgtacttgactgcattctctg |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40288920 |
acaaagtgcacaatcagcaataacttctgctgaagcagaaccagctagatatatgaaagttttgtacttgactgcattctctg |
40288838 |
T |
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