View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11385A_low_292 (Length: 230)
Name: NF11385A_low_292
Description: NF11385A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11385A_low_292 |
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Alignment Details
Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 36675002 - 36674780
Alignment:
| Q |
1 |
aacttataaatgcacgaatttaattgtattaggtagatcatgtatattgcatgtgttgtgactaattgtgagggagtatgtacggtggtattcgtcctat |
100 |
Q |
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| T |
36675002 |
aacttataaatgcactaatttaattgtattaggtagatcatgtatattgcatgtgttgtgactaattgtgagggagtatgtacggtggtattcgtcctat |
36674903 |
T |
|
| Q |
101 |
aaatagagaaaagtttgattgagcatatgattgagaaattaagttcatttgatggcagttggcactgtgtgttaagatactgatcatctactagccacta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
36674902 |
aaatagagaaaagtttgattgagcatatgattgagaaattaagttcatttgatggcagttggcactgtgt-ttaagatactgatcatctactagccacta |
36674804 |
T |
|
| Q |
201 |
tgacagagccgccaacgtccattt |
224 |
Q |
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||| |||||||||||||||||||| |
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| T |
36674803 |
tgatagagccgccaacgtccattt |
36674780 |
T |
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