View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11385A_low_349 (Length: 210)
Name: NF11385A_low_349
Description: NF11385A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11385A_low_349 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 25933610 - 25933819
Alignment:
| Q |
1 |
tttcctttgcaagcaggcttttactaatggaatatgcaacccatcttttaagaattgctacaacattatttgaagcaatggttaagaaccttgagctgaa |
100 |
Q |
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| T |
25933610 |
tttcctttgcaagcaggcttttactaatggaatatgcaacccatcttttaagaattgctacaacattatttgaagcaatggttaagaaccttgagctgaa |
25933709 |
T |
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| Q |
101 |
tctgaaaacaacaaagtcatatttatcagaaaacaatggcaacatacgtgtctatcgctatccacccactgatgttggttggggcatggaggttcataca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
25933710 |
tctgaaaacaacaaagtcatatttatcagaaaacaatggcaacatacgtgtctatcgttatccacccactgatgttggttggggcatggaggttcataca |
25933809 |
T |
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| Q |
201 |
gatagttcag |
210 |
Q |
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|||||||||| |
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| T |
25933810 |
gatagttcag |
25933819 |
T |
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