View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11385_high_24 (Length: 248)
Name: NF11385_high_24
Description: NF11385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11385_high_24 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 6 - 248
Target Start/End: Original strand, 16707791 - 16708033
Alignment:
| Q |
6 |
accaatttggagactcaaattggttcccaacaaagattgagagcttgtgttaagaaaatcatattgaaatgtaggtggagagtttctagggtttgttttt |
105 |
Q |
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| T |
16707791 |
accaatttggagactcaaattggttcccaacaaagattgagagcttgtgttaagaaaatcatattgaaatgtaggtggagagtttctagggtttgttttt |
16707890 |
T |
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| Q |
106 |
gatgtttgatgatacatttcatagttcctaggaggctctaaaatgcagtaataagttgaaggttggcttgaaacaactgctggaacaaaaggtgaggaat |
205 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16707891 |
gatgtttgatgatacatgtcatagttcctaggaggctctaaaatgcagtaataagttgaaggttggcttgaaacaactgctggaacaaaaggtgaggaat |
16707990 |
T |
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| Q |
206 |
tgggtgtgccttgtttggccttataagttgttctttctttcct |
248 |
Q |
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| T |
16707991 |
tgggtgtgccttgtttggccttataagttgttctttctttcct |
16708033 |
T |
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