View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11385_high_4 (Length: 494)
Name: NF11385_high_4
Description: NF11385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11385_high_4 |
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Alignment Details
Target: chr6 (Bit Score: 447; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 447; E-Value: 0
Query Start/End: Original strand, 19 - 477
Target Start/End: Complemental strand, 33026416 - 33025958
Alignment:
| Q |
19 |
ttcttaccttcggtgtgtcaatctcgaacacaggtctcttctgattcacaatcttttgattctcaaactgtttttgcatgacagatggaaatgttcttga |
118 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
33026416 |
ttcttaacttcggtgtgtcaatctcgaacacaggtctcttctgattcacaatcttttgattctcagactgtttttgcatgacagatggaaatgttcttga |
33026317 |
T |
|
| Q |
119 |
aggggattgttctaatcccatcaactttgcaacaagattggtacttttttccttccttggaaaagtcggtgaacacgaagaatcagaaagtttgtcatac |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33026316 |
aggggattgttctaatcccatcaactttgcaacaagattggtacttttttccttccttggaaaagtcggtgaacacgaagaatcagaaagtttgtcatac |
33026217 |
T |
|
| Q |
219 |
caaacaacagatgattggcttgagcttgtagaagggaatgctgctgaagctgaatccaatccttcagaagtgcttgtgctttggaatagattttgtcgaa |
318 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
33026216 |
caaacaacagatgattggcttgagcttgtagaagggaatgctgctgaagctgaatccaatccttcagaagtacttgtgctttggaatagattttgtcgaa |
33026117 |
T |
|
| Q |
319 |
ccaaactctccttaatcactttcttaagttcctctctacaactacttgaagaaccataagctgaattgtgttcaaaaaattgattagaatgtgttgatct |
418 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33026116 |
ccaaactctccttaatcactttcttaagttcctctctacaactacttgaagaaccataagctgaattgtgttcaaaaaattgattagaatgtgttgatct |
33026017 |
T |
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| Q |
419 |
atttccatcattcacatgtgcatcaattttacttctttcatgtttctcctcttgtcttc |
477 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33026016 |
atttccatcattcacatgtgcatcaattttacttctttcatgtttctcctcttgtcttc |
33025958 |
T |
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