View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11385_low_30 (Length: 210)
Name: NF11385_low_30
Description: NF11385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11385_low_30 |
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Alignment Details
Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 35154326 - 35154498
Alignment:
| Q |
17 |
agacaaattcgaatatgtacgtaaggcttgatactgacgagcacaaggagtgatcgtcgatacataaaaaacgtacaaagagcagctactaaaagcttat |
116 |
Q |
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| T |
35154326 |
agacaaatttgaatatatacgtaagacttgatactgacgaggacaaggagtgatcgtcaatacataaaaaacgtacaaagagcagctactaaaagcttat |
35154425 |
T |
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| Q |
117 |
aaacaaagggacacatatgaacgaactaaattcacacaaaaatacaagagactctaagactatacaggtatgatg |
191 |
Q |
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|||||||| ||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
35154426 |
aaacaaagagacac--atgaatgaactaaattcacacaaaaatacaagagaccctaagactatacaggtatgatg |
35154498 |
T |
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