View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11386A_low_132 (Length: 338)
Name: NF11386A_low_132
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11386A_low_132 |
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Alignment Details
Target: chr8 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 23496011 - 23495688
Alignment:
| Q |
1 |
tgttctttgcaatattgaatgatattttggacctttagatagaatgagatggtgaaatacatgaccatgctgaaatgaatcattatttgatataggactt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
23496011 |
tgttctttgcaatattgaatgatattttggacctttagatagaatgagatggtgaaatacatgaccatgctgaaatgaatcagtatttgatataggactt |
23495912 |
T |
|
| Q |
101 |
gtttattatcacatgtctgcttgagcatcttcattggtgaaaagggaggttattacatgtctacatctacatcaaatgtaatattattggctctgatgag |
200 |
Q |
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||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23495911 |
gtttattattacatgtctgcttaagcatcttcattggtgaaaagggaggttattacatgtctacatctacatcaaatgtaatattattggctctgatgag |
23495812 |
T |
|
| Q |
201 |
tgagnnnnnnntgcaaagaacaaaactctcgtatcgttctcacggctagaatccatgttaacataatccaattgtataactcaggaataatcgattctta |
300 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
23495811 |
tgaaaaaaaaatgcaaagaacaaaactctcgtatcgttctcacggctagaatccatgttaacatgctccaattgtataactcaggaataatcgattctta |
23495712 |
T |
|
| Q |
301 |
aatctaagaactcacttaagaata |
324 |
Q |
| |
|
|||||||||||||||||||||||| |
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| T |
23495711 |
aatctaagaactcacttaagaata |
23495688 |
T |
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