View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11386A_low_176 (Length: 306)
Name: NF11386A_low_176
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11386A_low_176 |
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Alignment Details
Target: chr1 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 7 - 294
Target Start/End: Complemental strand, 4377892 - 4377605
Alignment:
| Q |
7 |
aataccaccacttaaagtctaggatatctgaaatcgggtgctaaatcccttaataaaatcacttactttactctgaaatcaattactagttctaaaatat |
106 |
Q |
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| T |
4377892 |
aataccaccacttaaagtctaggatatctgaaatcgggtgctaaatcccttaataaaatcacttactttactctgaaatcaattactagttctaaaatat |
4377793 |
T |
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| Q |
107 |
ccaggcccataaattttataaatggtcatcctagcatattgcttattttgtgtgtagttgacctttcgtatcaaactatcaattgatctttcactttaat |
206 |
Q |
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| T |
4377792 |
ctaggcccataaattttataaatggtcatcctagcatattgcttattttgtgtgtagttgacctttcgtatcaaactatcaattgatctttcactttaat |
4377693 |
T |
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| Q |
207 |
ctaaagtaggaaaaacaacttttgtggcgggtatcatttgccacctgccgtatcaaagtgggtagaatgatgcacagtgaatgatatt |
294 |
Q |
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| T |
4377692 |
ctaaagtaggaaaaacaacttttgtggcgggtatcatttgccacctgccgtatcaaagtgggtagaatgatacacagtgaatgatatt |
4377605 |
T |
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