View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11386A_low_199 (Length: 288)
Name: NF11386A_low_199
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11386A_low_199 |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 13 - 282
Target Start/End: Complemental strand, 21832015 - 21831747
Alignment:
| Q |
13 |
atactaataggatgcataatttcatgataatcagcattcgtctcttacatcaaatatggtatcaacaaaacaagttcatcttatagagatctcatcaacc |
112 |
Q |
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| T |
21832015 |
atactaataggatgcataatttcatgataatcagcattcgtctcttacaccaaatatggtatcaacaaaacaagttcatcttatagagatctcatcaacc |
21831916 |
T |
|
| Q |
113 |
acatggagttcgaacttgaaataacctgaaaatacatttaaaataagcnnnnnnnnnnnnnnctttgtagaccgataaaaacatcaatgaggacattaga |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
21831915 |
acatggagttcgaacttgaaataacctgaaaatacatttaaaataagc-aaaaaaaaaaaaactttgtagaccgataaaaacatcaatgaggacattaga |
21831817 |
T |
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| Q |
213 |
tctcaaacatggtattaatggagtgatcaaataccacgatcgctttcgaggagggcacttggataccaag |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
21831816 |
tctcaaacatggtattaatggagtgatcaaataccacgatggctttcgaggagggcacttggataccaag |
21831747 |
T |
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