View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11386A_low_240 (Length: 269)
Name: NF11386A_low_240
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11386A_low_240 |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 36 - 249
Target Start/End: Original strand, 46477687 - 46477900
Alignment:
| Q |
36 |
tgtgttcatatgtggagaaatacctttgtgatggaattagtattgtttgtttctgggattttgaccaaattcttgttacagctgtgatagtagtggaatt |
135 |
Q |
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| T |
46477687 |
tgtgttcatatgtggagaaatacctttgtgatggaattagtattgtttgtttctgggattttgaccaaattcttgttacagctgtgatagtagtggaatt |
46477786 |
T |
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| Q |
136 |
tagattattttaatttaattgattgaaatattactgtataatgtggttattgttttatatatttgtcaaataatgtgcgtgctaagcgtgtagtgatgaa |
235 |
Q |
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| T |
46477787 |
tagattattttaatttaattgatggaaatattactgtataatgtggttattgttttatatatttgtcaaataatgtgcgtgctaagcgtgtagtgatgaa |
46477886 |
T |
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| Q |
236 |
ggggtattagtaat |
249 |
Q |
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|||||||||||||| |
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| T |
46477887 |
ggggtattagtaat |
46477900 |
T |
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