View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11386A_low_243 (Length: 269)
Name: NF11386A_low_243
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11386A_low_243 |
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Alignment Details
Target: chr6 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 5950882 - 5950630
Alignment:
| Q |
1 |
tactatgattgaagcagagatatcaatgctacttccagataggacgaacagttatccagacgacgagaataatgcaagtcctcgtcgttatcatcatttc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
5950882 |
tactatgattgaagcagagatatcaatgctacttccagataggacgaacagttatcaagacgacgagaataatgcaagtcctcgtcgttatcatcatttt |
5950783 |
T |
|
| Q |
101 |
ccctctgtctcttctgtttcatcgtcacaagaatcattgtcgggtgcagtcaatagagctgatgacatatcaaatggatatcgctggcaccatggtacgt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |
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| T |
5950782 |
ccctctgtctcttctgtttcatcgtcacaagaatcattgtcgggtgcagtcaatagagttgatgacatatcaaatggatatcgctggcaccctggtacgt |
5950683 |
T |
|
| Q |
201 |
cttctttttcccttcacaagctatgttgtggatgtcctatttcaatgatgtcc |
253 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5950682 |
cttctttttcccttcacaagctatgttgtggatgtcctatttcaatgatgtcc |
5950630 |
T |
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