View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11386A_low_257 (Length: 265)
Name: NF11386A_low_257
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11386A_low_257 |
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Alignment Details
Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 10 - 259
Target Start/End: Original strand, 31206020 - 31206269
Alignment:
| Q |
10 |
tcaaagatcataatggagcaattggtgaaattcaataaaattattgacgattgagtgaatattgaaagatactctcttttatggaaaggaagacactgat |
109 |
Q |
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| T |
31206020 |
tcaaagatcataatggagcaattggtgaaattcaataaaattattgacgattgagtgaatattgaaagatgctctcttttatggaaaggaagacactgat |
31206119 |
T |
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| Q |
110 |
gttttggataaagtctaattagatattaagaccaagaaactaaccatgtttaagaacttgaacgtgaaattttgagtgtgtcaagaggaagatgtgaaag |
209 |
Q |
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| T |
31206120 |
gttttggataaagtctaattagatattaagaccaagaaactaaccatgtttaaaaacttgaacgtgaaactttgagtgtgtcaaaaggaagatgtgaaag |
31206219 |
T |
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| Q |
210 |
taaaggaaaatgggcggctaaactaaactcatattctagtcacccattga |
259 |
Q |
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| T |
31206220 |
taaaggaaaatgggtggctaaactaaaatcatattctagtcacacattga |
31206269 |
T |
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