View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11386A_low_259 (Length: 264)

Name: NF11386A_low_259
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11386A_low_259
NF11386A_low_259
[»] chr8 (20 HSPs)
chr8 (1-264)||(6483510-6483773)
chr8 (16-57)||(44047543-44047584)
chr8 (16-57)||(45041327-45041368)
chr8 (16-59)||(490565-490608)
chr8 (15-57)||(5057595-5057637)
chr8 (16-65)||(12491140-12491190)
chr8 (15-57)||(30812827-30812869)
chr8 (16-57)||(1928598-1928639)
chr8 (12-57)||(3638346-3638391)
chr8 (16-57)||(11523734-11523775)
chr8 (16-57)||(14742093-14742134)
chr8 (16-57)||(25473414-25473455)
chr8 (16-57)||(32931190-32931231)
chr8 (16-64)||(36394951-36395000)
chr8 (16-57)||(36545379-36545420)
chr8 (10-55)||(36565254-36565299)
chr8 (16-57)||(42469738-42469779)
chr8 (16-57)||(44529455-44529496)
chr8 (16-57)||(44699696-44699737)
chr8 (16-57)||(45419465-45419506)
[»] chr7 (30 HSPs)
chr7 (16-57)||(20158682-20158723)
chr7 (16-64)||(9210707-9210756)
chr7 (16-57)||(31681031-31681072)
chr7 (16-57)||(40630664-40630705)
chr7 (10-57)||(34745971-34746018)
chr7 (16-69)||(6263489-6263543)
chr7 (16-57)||(2885733-2885774)
chr7 (16-57)||(6375098-6375139)
chr7 (16-57)||(7273330-7273371)
chr7 (16-57)||(11594190-11594231)
chr7 (16-57)||(12841286-12841327)
chr7 (12-57)||(26847832-26847877)
chr7 (16-57)||(27649010-27649051)
chr7 (16-57)||(28208339-28208380)
chr7 (16-57)||(28708611-28708652)
chr7 (16-57)||(29650614-29650655)
chr7 (16-57)||(30814136-30814177)
chr7 (16-57)||(31005435-31005476)
chr7 (16-57)||(31682613-31682654)
chr7 (16-57)||(31869113-31869154)
chr7 (16-57)||(34869650-34869691)
chr7 (16-57)||(35906212-35906253)
chr7 (16-57)||(36101788-36101829)
chr7 (16-57)||(37618175-37618216)
chr7 (16-57)||(39906383-39906424)
chr7 (16-57)||(40979939-40979980)
chr7 (16-64)||(42187671-42187720)
chr7 (16-57)||(43281904-43281945)
chr7 (12-56)||(17759499-17759543)
chr7 (16-56)||(42969928-42969968)
[»] chr1 (32 HSPs)
chr1 (16-57)||(7133313-7133354)
chr1 (1-57)||(39525980-39526036)
chr1 (3-57)||(41165499-41165553)
chr1 (16-57)||(4318856-4318897)
chr1 (16-53)||(9599409-9599446)
chr1 (16-57)||(37311766-37311807)
chr1 (4-57)||(38869100-38869153)
chr1 (5-57)||(19908395-19908447)
chr1 (16-56)||(32082768-32082808)
chr1 (16-64)||(32404530-32404578)
chr1 (13-57)||(33560869-33560913)
chr1 (4-56)||(43598934-43598986)
chr1 (15-62)||(7124370-7124417)
chr1 (16-57)||(1210975-1211016)
chr1 (16-57)||(2544823-2544864)
chr1 (16-57)||(4001466-4001507)
chr1 (16-57)||(22175375-22175416)
chr1 (16-57)||(25979242-25979283)
chr1 (16-57)||(27072498-27072539)
chr1 (16-57)||(29577482-29577523)
chr1 (16-57)||(30202141-30202182)
chr1 (16-57)||(36339815-36339856)
chr1 (16-57)||(37462887-37462928)
chr1 (16-57)||(41560459-41560500)
chr1 (16-57)||(42539223-42539264)
chr1 (16-57)||(43481809-43481850)
chr1 (16-57)||(44941787-44941828)
chr1 (16-57)||(49347404-49347445)
chr1 (16-57)||(52532627-52532668)
chr1 (16-57)||(52561600-52561641)
chr1 (16-57)||(52921310-52921351)
chr1 (1-57)||(25715337-25715393)
[»] chr4 (31 HSPs)
chr4 (1-57)||(45209216-45209272)
chr4 (16-57)||(15665331-15665372)
chr4 (4-57)||(22420728-22420781)
chr4 (16-57)||(23906308-23906349)
chr4 (16-57)||(29399034-29399075)
chr4 (16-64)||(51811283-51811330)
chr4 (10-45)||(4136766-4136801)
chr4 (10-57)||(17900704-17900751)
chr4 (10-57)||(19154874-19154921)
chr4 (15-65)||(37042666-37042717)
chr4 (14-57)||(38017317-38017360)
chr4 (18-57)||(47372936-47372975)
chr4 (15-57)||(44719372-44719414)
chr4 (16-57)||(436459-436500)
chr4 (16-57)||(7947167-7947208)
chr4 (16-57)||(21528518-21528559)
chr4 (16-57)||(27450191-27450232)
chr4 (16-57)||(30634117-30634158)
chr4 (16-57)||(31959825-31959866)
chr4 (16-57)||(32479268-32479309)
chr4 (16-57)||(36255533-36255574)
chr4 (16-57)||(48174104-48174145)
chr4 (4-57)||(49738561-49738614)
chr4 (16-57)||(50238626-50238667)
chr4 (16-57)||(50238712-50238753)
chr4 (16-57)||(50862861-50862902)
chr4 (16-57)||(51438675-51438716)
chr4 (16-57)||(52569526-52569567)
chr4 (16-57)||(55007976-55008017)
chr4 (16-56)||(4441083-4441123)
chr4 (1-57)||(49686908-49686964)
[»] chr3 (18 HSPs)
chr3 (1-57)||(49503579-49503635)
chr3 (16-57)||(19676092-19676133)
chr3 (16-67)||(41529991-41530043)
chr3 (17-57)||(48734158-48734198)
chr3 (16-55)||(7446275-7446314)
chr3 (16-55)||(7454417-7454456)
chr3 (11-57)||(52139025-52139071)
chr3 (16-57)||(5169062-5169103)
chr3 (16-57)||(12096716-12096757)
chr3 (16-57)||(24778620-24778661)
chr3 (16-57)||(29601122-29601163)
chr3 (16-57)||(31566172-31566213)
chr3 (16-53)||(40273220-40273257)
chr3 (16-57)||(40672378-40672419)
chr3 (16-57)||(42510027-42510068)
chr3 (20-57)||(45374488-45374525)
chr3 (16-57)||(48508465-48508506)
chr3 (16-57)||(52927859-52927900)
[»] chr2 (26 HSPs)
chr2 (1-57)||(8197552-8197608)
chr2 (1-57)||(8202312-8202368)
chr2 (16-63)||(3720420-3720467)
chr2 (10-57)||(42092741-42092788)
chr2 (16-57)||(3481384-3481425)
chr2 (4-57)||(11992119-11992172)
chr2 (16-57)||(18959141-18959182)
chr2 (1-48)||(12026032-12026079)
chr2 (16-57)||(227419-227460)
chr2 (16-57)||(451659-451700)
chr2 (16-57)||(3635334-3635375)
chr2 (16-57)||(4807825-4807866)
chr2 (16-64)||(8181010-8181059)
chr2 (16-57)||(9531611-9531652)
chr2 (16-57)||(12474938-12474979)
chr2 (16-57)||(12520073-12520114)
chr2 (16-57)||(17670698-17670739)
chr2 (16-57)||(25834908-25834949)
chr2 (16-57)||(28508908-28508949)
chr2 (16-57)||(30306262-30306303)
chr2 (16-57)||(35755256-35755297)
chr2 (16-57)||(38328381-38328422)
chr2 (16-57)||(41763054-41763095)
chr2 (16-57)||(43573141-43573182)
chr2 (1-57)||(10516760-10516816)
chr2 (16-64)||(38430114-38430162)
[»] chr6 (9 HSPs)
chr6 (4-65)||(21089615-21089677)
chr6 (16-57)||(34516-34557)
chr6 (16-57)||(608391-608432)
chr6 (16-57)||(9707000-9707041)
chr6 (16-57)||(12890805-12890846)
chr6 (16-57)||(28085606-28085647)
chr6 (16-57)||(30789085-30789126)
chr6 (16-57)||(34934841-34934882)
chr6 (16-56)||(8364786-8364826)
[»] chr5 (24 HSPs)
chr5 (4-57)||(15588401-15588454)
chr5 (17-53)||(38830550-38830586)
chr5 (16-59)||(13561395-13561438)
chr5 (10-57)||(28411900-28411947)
chr5 (16-55)||(42272707-42272746)
chr5 (15-57)||(2645219-2645261)
chr5 (20-57)||(79747-79784)
chr5 (16-57)||(408505-408546)
chr5 (16-57)||(2915507-2915548)
chr5 (16-57)||(3302074-3302115)
chr5 (16-57)||(4496614-4496655)
chr5 (16-57)||(5558371-5558412)
chr5 (16-57)||(5860064-5860105)
chr5 (16-57)||(7359272-7359313)
chr5 (13-65)||(11002423-11002476)
chr5 (16-57)||(16347391-16347432)
chr5 (16-57)||(20457003-20457044)
chr5 (16-57)||(28985313-28985354)
chr5 (16-57)||(29816612-29816653)
chr5 (16-57)||(30213805-30213846)
chr5 (16-57)||(38685197-38685238)
chr5 (16-57)||(42576240-42576281)
chr5 (16-48)||(219480-219512)
chr5 (17-57)||(1287590-1287630)
[»] scaffold1318 (1 HSPs)
scaffold1318 (16-57)||(561-602)
[»] scaffold0570 (1 HSPs)
scaffold0570 (16-57)||(959-1000)
[»] scaffold0168 (1 HSPs)
scaffold0168 (16-57)||(28900-28941)
[»] scaffold0018 (1 HSPs)
scaffold0018 (16-57)||(31698-31739)
[»] scaffold0050 (1 HSPs)
scaffold0050 (16-56)||(58238-58278)


Alignment Details
Target: chr8 (Bit Score: 248; Significance: 1e-138; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 6483510 - 6483773
Alignment:
Q  1 aatattatcgcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttgttgttgtaatttgctataggtacattgatagtaatcaaattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6483510 aatattatcgcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttgttgttgtaatttgctataggtacattgatagtgatcaaattaa 6483609  T
Q  101 gaatttgtgtttttaacttctaaacaatctatctgtgcgagcaatagtataacattagaggtgatgtgggagaaaatcaccttttggtgaatggtaatat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6483610 gaatttgtgtttttaacttctaaacaatctatctgtgcgagcaatagtataacattagaggtgatgtgggagaaaatcaccttttggtgaatggtaatat 6483709  T
Q  201 tgcgtaggaacctaatgatattatgctattgttgctaccttgtgttctttattttttattttga 264  Q
    || | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6483710 tgtgcaggaacctaatgatattatgctattgttgctactttgtgttctttattttttattttga 6483773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 44047584 - 44047543
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  44047584 tttgatccatgtagctgaccccacttagtgggataaggcttg 44047543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 45041368 - 45041327
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  45041368 tttgatccatgtagctgaccccacttagtgggataaggcttg 45041327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 490565 - 490608
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttgtt 59  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||||    
T  490565 tttgatccatgtagccgaccccacttagtgggataaggcttgtt 490608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 5057595 - 5057637
Alignment:
Q  15 gtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||||||||| |||| |||||||||||||| ||||||||    
T  5057595 gtttgatccatgtaactgatcctacttagtgggataaggcttg 5057637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 12491190 - 12491140
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggctt-gttgttgta 65  Q
    ||||||||||||||| ||||| ||||||||||| ||||||| |||||||||    
T  12491190 tttgatccatgtagccgaccccacttagtgggataaggcttagttgttgta 12491140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 30812869 - 30812827
Alignment:
Q  15 gtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||    
T  30812869 gtttgattcatgtagccgaccccacttagtgggaaaaggcttg 30812827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 1928639 - 1928598
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  1928639 tttgatccatgtagccgaccccacttagtgggataaggcttg 1928598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 3638391 - 3638346
Alignment:
Q  12 gttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||| |||||| ||||||||| ||||||||||| ||||||||    
T  3638391 gttgtttgttccatggagctgaccccacttagtgggataaggcttg 3638346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 11523775 - 11523734
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  11523775 tttgatccatgtagccgaccccacttagtgggataaggcttg 11523734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 14742134 - 14742093
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  14742134 tttgatccatgtagccgaccccacttagtgggataaggcttg 14742093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 25473455 - 25473414
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  25473455 tttgatccatgtagccgaccccacttagtgggataaggcttg 25473414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 32931190 - 32931231
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||    
T  32931190 tttgatccatgtagccgaccccacttagtgggaaaagccttg 32931231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 36395000 - 36394951
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggctt-gttgttgt 64  Q
    ||||||||||||||| ||||| ||||||||||| ||||||| ||||||||    
T  36395000 tttgatccatgtagccgaccccacttagtgggataaggcttcgttgttgt 36394951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 36545379 - 36545420
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  36545379 tttgatccatgtagccgaccccacttagtgggataaggcttg 36545420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 36565299 - 36565254
Alignment:
Q  10 gcgttgtttgatccatgtagctgaccctacttagtgggaaaaggct 55  Q
    ||||| ||||||||||||||| ||||| ||||||||||| ||||||    
T  36565299 gcgttatttgatccatgtagccgaccccacttagtgggataaggct 36565254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 42469779 - 42469738
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||||||| ||||| ||||| ||||||||    
T  42469779 tttgatccatgtagctgaccccacttattgggataaggcttg 42469738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 44529455 - 44529496
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  44529455 tttgatccatgtagccgaccccacttagtgggataaggcttg 44529496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 44699696 - 44699737
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||| |||||| ||||| ||||||||||||||||||||    
T  44699696 tttgatccctgtagcagaccccacttagtgggaaaaggcttg 44699737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 45419465 - 45419506
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  45419465 tttgatccatgtagccgaccccacttagtgggataaggcttg 45419506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 20158723 - 20158682
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  20158723 tttgatccatgtagctgaccctacttagtgggataaggcttg 20158682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 9210756 - 9210707
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggctt-gttgttgt 64  Q
    ||||||||||||||||||||| ||||||||||| ||||||| ||||||||    
T  9210756 tttgatccatgtagctgaccccacttagtgggataaggcttcgttgttgt 9210707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 31681072 - 31681031
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  31681072 tttgatccatgtagccgaccccacttagtgggaaaaggcttg 31681031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 40630664 - 40630705
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  40630664 tttgatccatgtagccgaccccacttagtgggaaaaggcttg 40630705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 34745971 - 34746018
Alignment:
Q  10 gcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||||||| |||||||| ||||| ||||||||||| ||||||||    
T  34745971 gcgttgtttgattcatgtagccgaccccacttagtgggataaggcttg 34746018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 6263489 - 6263543
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggctt-gttgttgtaattt 69  Q
    ||||||||||||||| ||||| ||||||||||| ||||||| |||||||| ||||    
T  6263489 tttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttattt 6263543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 2885774 - 2885733
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  2885774 tttgatccatgtagccgaccccacttagtgggataaggcttg 2885733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 6375098 - 6375139
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  6375098 tttgatccatgtagccgaccccacttagtgggataaggcttg 6375139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 7273330 - 7273371
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  7273330 tttgatccatgtagccgaccccacttagtgggataaggcttg 7273371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 11594190 - 11594231
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  11594190 tttgatccatgtagccgaccccacttagtgggataaggcttg 11594231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 12841327 - 12841286
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  12841327 tttgatccatgtagccgaccccacttagtgggataaggcttg 12841286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 26847832 - 26847877
Alignment:
Q  12 gttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||| ||||| ||||| ||||||||||| ||||||||    
T  26847832 gttgtttgatccacgtagccgacccgacttagtgggataaggcttg 26847877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 27649010 - 27649051
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  27649010 tttgatccatgtagccgaccccacttagtgggataaggcttg 27649051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 28208380 - 28208339
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  28208380 tttgatccatgtagccgaccccacttagtgggataaggcttg 28208339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 28708611 - 28708652
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  28708611 tttgatccatgtagccgaccccacttagtgggataaggcttg 28708652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 29650614 - 29650655
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  29650614 tttgatccatgtagccgaccccacttagtgggataaggcttg 29650655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 30814177 - 30814136
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| |||||||||||| |||||||    
T  30814177 tttgatccatgtagccgaccccacttagtgggaagaggcttg 30814136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 31005435 - 31005476
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  31005435 tttgatccatgtagccgaccccacttagtgggataaggcttg 31005476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 31682654 - 31682613
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  31682654 tttgatccatgtagccgaccccacttagtgggataaggcttg 31682613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 31869154 - 31869113
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  31869154 tttgatccatgtagccgaccccacttagtgggataaggcttg 31869113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 34869650 - 34869691
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||    
T  34869650 tttgatccatgtagccgaccctaattagtgggataaggcttg 34869691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 35906253 - 35906212
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  35906253 tttgatccatgtagccgaccccacttagtgggataaggcttg 35906212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 36101829 - 36101788
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||||||||| |||||| ||||||||||| ||||||||    
T  36101829 tttgatccatgtagttgaccccacttagtgggataaggcttg 36101788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 37618175 - 37618216
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  37618175 tttgatccatgtagccgaccccacttagtgggataaggcttg 37618216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 39906424 - 39906383
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  39906424 tttgatccatgtagccgaccccacttagtgggataaggcttg 39906383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 40979980 - 40979939
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  40979980 tttgatccatgtagccgaccccacttagtgggataaggcttg 40979939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 42187671 - 42187720
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggc-ttgttgttgt 64  Q
    ||||||||||||||| ||||| ||||||||||| ||||| ||||||||||    
T  42187671 tttgatccatgtagccgaccccacttagtgggataaggctttgttgttgt 42187720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 43281904 - 43281945
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  43281904 tttgatccatgtagccgaccccacttagtgggacaaggcttg 43281945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 17759499 - 17759543
Alignment:
Q  12 gttgtttgatccatgtagctgaccctacttagtgggaaaaggctt 56  Q
    |||||||||| |||||||| ||||| ||||||||||| |||||||    
T  17759499 gttgtttgattcatgtagccgaccccacttagtgggataaggctt 17759543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 42969928 - 42969968
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggctt 56  Q
    ||||||||||||||| ||||| ||||||||||| |||||||    
T  42969928 tttgatccatgtagccgaccccacttagtgggataaggctt 42969968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 7133354 - 7133313
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  7133354 tttgatccatgtagctgaccccacttagtgggaaaaggcttg 7133313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 39525980 - 39526036
Alignment:
Q  1 aatattatcgcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||| |||| |||||||||||||||||||||||| |||||||||  |||||||    
T  39525980 aatattatggcgtcgtttgatccatgtagctgaccctatttagtgggaccaggcttg 39526036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 41165499 - 41165553
Alignment:
Q  3 tattatcgcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||| ||||  ||||||||||||||| ||||| ||||||||||||||||||||    
T  41165499 tattatggcgtcatttgatccatgtagccgaccccacttagtgggaaaaggcttg 41165553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 4318897 - 4318856
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  4318897 tttgatccatgtagccgaccccacttagtgggaaaaggcttg 4318856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 9599446 - 9599409
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaagg 53  Q
    |||||||||||||||||||| |||||||||||||||||    
T  9599446 tttgatccatgtagctgaccttacttagtgggaaaagg 9599409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 37311807 - 37311766
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  37311807 tttgatccatgtagccgaccccacttagtgggaaaaggcttg 37311766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 38869100 - 38869153
Alignment:
Q  4 attatcgcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||| |||| |||||||||||||||| ||||| |||||||||||||| |||||    
T  38869100 attatggcgtcgtttgatccatgtagccgaccccacttagtgggaaaatgcttg 38869153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 19908447 - 19908395
Alignment:
Q  5 ttatcgcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||| |||| |||||||||||||| ||||||| ||||||||||| ||||||||    
T  19908447 ttattgcgtagtttgatccatgtacctgaccccacttagtgggataaggcttg 19908395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 32082808 - 32082768
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggctt 56  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  32082808 tttgatccatgtagccgaccccacttagtgggaaaaggctt 32082768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 32404578 - 32404530
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttgttgttgt 64  Q
    ||||||||||||||| ||||| ||||||||||| |||||| ||||||||    
T  32404578 tttgatccatgtagccgaccccacttagtgggataaggctggttgttgt 32404530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 33560913 - 33560869
Alignment:
Q  13 ttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||    
T  33560913 ttgtttgatccatgtagccaaccctacttagtgggataaggcttg 33560869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 43598986 - 43598934
Alignment:
Q  4 attatcgcgttgtttgatccatgtagctgaccctacttagtgggaaaaggctt 56  Q
    ||||| |||| |||||||||||||||| ||||||||||| ||||| |||||||    
T  43598986 attatggcgtagtttgatccatgtagcagaccctacttactgggataaggctt 43598934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 7124370 - 7124417
Alignment:
Q  15 gtttgatccatgtagctgaccctacttagtgggaaaaggcttgttgtt 62  Q
    |||||||||||||||||||||  ||||||||||| |||| ||||||||    
T  7124370 gtttgatccatgtagctgacctcacttagtgggataagggttgttgtt 7124417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 1210975 - 1211016
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  1210975 tttgatccatgtagccgaccccacttagtgggataaggcttg 1211016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 2544823 - 2544864
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||| ||||||||||    
T  2544823 tttgatccatgtagccgaccccacttagtggtaaaaggcttg 2544864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 4001507 - 4001466
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||||||||||  |||| ||||||||||||||||||||    
T  4001507 tttgatccatgtagccaaccccacttagtgggaaaaggcttg 4001466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 22175375 - 22175416
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  22175375 tttgatccatgtagccgaccccacttagtgggataaggcttg 22175416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 25979283 - 25979242
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  25979283 tttgatccatgtagccgaccccacttagtgggataaggcttg 25979242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 27072539 - 27072498
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| |||| | |||||||||||||||||||    
T  27072539 tttgatccatgtagccgaccatgcttagtgggaaaaggcttg 27072498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 29577482 - 29577523
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  29577482 tttgatccatgtagccgaccccacttagtgggataaggcttg 29577523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 30202182 - 30202141
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  30202182 tttgatccatgtagccgaccccacttagtgggataaggcttg 30202141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 36339856 - 36339815
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||||| | |||||||||||||| |||||    
T  36339856 tttgatccatgtagctgactccacttagtgggaaaatgcttg 36339815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 37462928 - 37462887
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  37462928 tttgatccatgtagccgaccccacttagtgggataaggcttg 37462887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 41560459 - 41560500
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  41560459 tttgatccatgtagccgaccccacttagtgggataaggcttg 41560500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 42539264 - 42539223
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||  ||||| ||||||||||||||||||||    
T  42539264 tttgatccatgtagacgaccccacttagtgggaaaaggcttg 42539223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 43481850 - 43481809
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  43481850 tttgatccatgtagccgaccccacttagtgggataaggcttg 43481809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 44941828 - 44941787
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  44941828 tttgatccatgtagccgaccccacttagtgggataaggcttg 44941787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 49347445 - 49347404
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  49347445 tttgatccatgtagccgaccccacttagtgggataaggcttg 49347404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 52532668 - 52532627
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||| |||||||| ||||| ||||||||||||||||||||    
T  52532668 tttgattcatgtagccgaccccacttagtgggaaaaggcttg 52532627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 52561641 - 52561600
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  52561641 tttgatccatgtagccgaccccacttagtgggataaggcttg 52561600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 52921310 - 52921351
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  52921310 tttgatccatgtagccgaccccacttagtgggataaggcttg 52921351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 25715393 - 25715337
Alignment:
Q  1 aatattatcgcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||| ||||  ||||||||||||||| ||||  ||||||||||| ||||||||    
T  25715393 aatattatggcgtaatttgatccatgtagccgacctcacttagtgggataaggcttg 25715337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000006; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 45209272 - 45209216
Alignment:
Q  1 aatattatcgcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||| |||| |||||||||||||||| ||||| ||||||||||| ||||||||    
T  45209272 aatattatggcgtagtttgatccatgtagccgaccccacttagtgggataaggcttg 45209216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 15665331 - 15665372
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  15665331 tttgatccatgtagctgaccccacttagtgggataaggcttg 15665372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 22420781 - 22420728
Alignment:
Q  4 attatcgcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||| ||||||||||||| |||||| |||||| ||||||||||| ||||||||    
T  22420781 attatggcgttgtttgatctatgtagttgaccccacttagtgggataaggcttg 22420728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 23906349 - 23906308
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  23906349 tttgatccatgtagctgaccccacttagtgggataaggcttg 23906308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 29399034 - 29399075
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  29399034 tttgattcatgtagctgaccccacttagtgggaaaaggcttg 29399075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 51811330 - 51811283
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttgttgttgt 64  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||||||    
T  51811330 tttgatccatgtagccgaccc-acttagtgggataaggcttgttgttgt 51811283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 4136801 - 4136766
Alignment:
Q  10 gcgttgtttgatccatgtagctgaccctacttagtg 45  Q
    ||||||||||||||||||||| ||||||||||||||    
T  4136801 gcgttgtttgatccatgtagccgaccctacttagtg 4136766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 17900704 - 17900751
Alignment:
Q  10 gcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||||||| ||| |||||||||| ||||||||||| ||||||||    
T  17900704 gcgttgtttgattcatttagctgaccccacttagtgggataaggcttg 17900751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 19154921 - 19154874
Alignment:
Q  10 gcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||| ||||||||||| ||||||||| ||||||||||| ||||||||    
T  19154921 gcgttatttgatccatgcagctgaccccacttagtgggataaggcttg 19154874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 37042717 - 37042666
Alignment:
Q  15 gtttgatccatgtagctgaccctacttagtgggaaaaggctt-gttgttgta 65  Q
    |||||||||||||||| ||||| ||||||||||| ||||||| |||||||||    
T  37042717 gtttgatccatgtagccgacccgacttagtgggataaggcttggttgttgta 37042666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 38017317 - 38017360
Alignment:
Q  14 tgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||| || |||||||||||||| ||||||||    
T  38017317 tgtttgatccatgtagccgatcctacttagtgggataaggcttg 38017360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 47372936 - 47372975
Alignment:
Q  18 tgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||| ||||||||||||||||| ||||||||    
T  47372936 tgatccatgtagccgaccctacttagtgggataaggcttg 47372975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 44719414 - 44719372
Alignment:
Q  15 gtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||    
T  44719414 gtttgatccatgtagccgaccctacttagtgggataagacttg 44719372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 436459 - 436500
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  436459 tttgatccatgtagccgaccccacttagtgggataaggcttg 436500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 7947167 - 7947208
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  7947167 tttgatccatgtagccgaccccacttagtgggataaggcttg 7947208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 21528518 - 21528559
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  21528518 tttgatccatgtagccgaccccacttagtgggataaggcttg 21528559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 27450232 - 27450191
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  27450232 tttgatccatgtagccgaccccacttagtgggataaggcttg 27450191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 30634158 - 30634117
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  30634158 tttgatccatgtagccgaccccacttagtgggataaggcttg 30634117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 31959866 - 31959825
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  31959866 tttgatccatgtagccgaccccacttagtgggataaggcttg 31959825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 32479268 - 32479309
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||| ||||||||||    
T  32479268 tttgatccatgtagccgaccccacttagtggaaaaaggcttg 32479309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 36255574 - 36255533
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||||||| || ||||| ||||||||||||||||||||    
T  36255574 tttgatccatgtggccgaccccacttagtgggaaaaggcttg 36255533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 48174145 - 48174104
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  48174145 tttgatccatgtagcagaccccacttagtgggataaggcttg 48174104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 49738614 - 49738561
Alignment:
Q  4 attatcgcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||| ||| ||||||||||||||||| ||||| | ||||||||| ||||||||    
T  49738614 attatggcggtgtttgatccatgtagccgaccccatttagtgggataaggcttg 49738561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 50238667 - 50238626
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  50238667 tttgatccatgtagccgaccccacttagtgggataaggcttg 50238626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 50238753 - 50238712
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  50238753 tttgatccatgtagccgaccccacttagtgggataaggcttg 50238712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 50862861 - 50862902
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  50862861 tttgatccatgtagccgaccccacttagtgggataaggcttg 50862902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 51438675 - 51438716
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||||||| |||| |||||| ||||||||    
T  51438675 tttgatccatgtagctgacccaactttgtgggataaggcttg 51438716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 52569567 - 52569526
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  52569567 tttgatccatgtagccgaccccacttagtgggataaggcttg 52569526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 55007976 - 55008017
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  55007976 tttgatccatgtagccgaccccacttagtgggataaggcttg 55008017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 4441083 - 4441123
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggctt 56  Q
    ||||||||||||||| ||||| ||||||||||| |||||||    
T  4441083 tttgatccatgtagccgaccccacttagtgggataaggctt 4441123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 49686908 - 49686964
Alignment:
Q  1 aatattatcgcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||| |||| |||||| ||||||||| ||||| ||||||||||| ||| ||||    
T  49686908 aatattatggcgtcgtttgaaccatgtagccgaccccacttagtgggataagacttg 49686964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000006; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 49503635 - 49503579
Alignment:
Q  1 aatattatcgcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||| ||||  ||||||||||||||| ||||||||||||||||| ||||||||    
T  49503635 aatattatggcgtaatttgatccatgtagccgaccctacttagtgggataaggcttg 49503579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 19676133 - 19676092
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  19676133 tttgatccatgtagctgaccccacttagtgggataaggcttg 19676092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 41529991 - 41530043
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggctt-gttgttgtaat 67  Q
    ||||||||||||||| ||||| ||||||||||| ||||||| |||||||||||    
T  41529991 tttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtaat 41530043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 48734198 - 48734158
Alignment:
Q  17 ttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||||||||||||||| ||||||||||| ||||||||    
T  48734198 ttgatccatgtagctgaccccacttagtgggataaggcttg 48734158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 7446275 - 7446314
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggct 55  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  7446275 tttgatccatgtagctgactccacttagtgggaaaaggct 7446314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 7454417 - 7454456
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggct 55  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  7454417 tttgatccatgtagctgactccacttagtgggaaaaggct 7454456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 52139025 - 52139071
Alignment:
Q  11 cgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||| ||||||||||||||| ||||| ||||||||||| ||||||||    
T  52139025 cgttatttgatccatgtagccgaccccacttagtgggataaggcttg 52139071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 5169062 - 5169103
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  5169062 tttgatccatgtagccgaccccacttagtgggataaggcttg 5169103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 12096757 - 12096716
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  12096757 tttgatccatgtagccgaccccacttagtgggataaggcttg 12096716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 24778661 - 24778620
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  24778661 tttgatccatgtagccgaccccacttagtgggataaggcttg 24778620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 29601122 - 29601163
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||||||| ||||||||||| | ||||||    
T  29601122 tttgatccatgtagctgaccccacttagtgggatacggcttg 29601163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 31566213 - 31566172
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  31566213 tttgatccatgtagccgaccccacttagtgggataaggcttg 31566172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 40273257 - 40273220
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaagg 53  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  40273257 tttgatccatgtagccgaccccacttagtgggaaaagg 40273220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 40672419 - 40672378
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||||||  ||||||||||| ||||||||    
T  40672419 tttgatccatgtagctgacctcacttagtgggataaggcttg 40672378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 42510068 - 42510027
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| |||||| |||||||||||||    
T  42510068 tttgatccatgtagccgaccccacttagagggaaaaggcttg 42510027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 45374525 - 45374488
Alignment:
Q  20 atccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  45374525 atccatgtagctgaccccacttagtgggataaggcttg 45374488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 48508465 - 48508506
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  48508465 tttgatccatgtagccgaccccacttagtgggataaggcttg 48508506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 52927900 - 52927859
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  52927900 tttgatccatgtagccgaccccacttagtgggataaggcttg 52927859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8197608 - 8197552
Alignment:
Q  1 aatattatcgcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||| |||| |||||||||||||||| ||||||||||||||||| || |||||    
T  8197608 aatattatggcgtcgtttgatccatgtagccgaccctacttagtgggataatgcttg 8197552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8202368 - 8202312
Alignment:
Q  1 aatattatcgcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||| |||| |||||||||||||||| ||||||||||||||||| || |||||    
T  8202368 aatattatggcgtcgtttgatccatgtagccgaccctacttagtgggataatgcttg 8202312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 3720467 - 3720420
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttgttgttg 63  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||||||||    
T  3720467 tttgatccatgtagccgaccccacttagtgggagaaggcttgttgttg 3720420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 42092741 - 42092788
Alignment:
Q  10 gcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||||||||||||||||||||| |||  |||||||    
T  42092741 gcgttgtttgatccatgtagctgaccctacttagtaggattaggcttg 42092788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 3481384 - 3481425
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||||||| ||||||| ||||||||||||    
T  3481384 tttgatccatgtagctgaccccacttagttggaaaaggcttg 3481425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 11992172 - 11992119
Alignment:
Q  4 attatcgcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||| | ||||||||    
T  11992172 attatggcgttatttgatccatgtagctgaccccacttagtggaataaggcttg 11992119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 18959141 - 18959182
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  18959141 tttgatccatgtagctgaccccacttagtgggataaggcttg 18959182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12026079 - 12026032
Alignment:
Q  1 aatattatcgcgttgtttgatccatgtagctgaccctacttagtggga 48  Q
    ||||||||  ||| |||||||||||||||||||||| |||||||||||    
T  12026079 aatattataacgtcgtttgatccatgtagctgaccccacttagtggga 12026032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 227419 - 227460
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  227419 tttgatccatgtagccgaccccacttagtgggataaggcttg 227460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 451700 - 451659
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  451700 tttgatccatgtagccgaccccacttagtgggacaaggcttg 451659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 3635375 - 3635334
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  3635375 tttgatccatgtagccgaccccacttagtgggataaggcttg 3635334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 4807825 - 4807866
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  4807825 tttgatccatgtagccgaccccacttagtgggataaggcttg 4807866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 8181010 - 8181059
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggctt-gttgttgt 64  Q
    ||||||||||||||| ||||| ||||||||||| ||||||| ||||||||    
T  8181010 tttgatccatgtagccgaccccacttagtgggataaggcttcgttgttgt 8181059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 9531652 - 9531611
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  9531652 tttgatccatgtagccgaccccacttagtgggataaggcttg 9531611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 12474979 - 12474938
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  12474979 tttgatccatgtagccgaccccacttagtgggataaggcttg 12474938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 12520114 - 12520073
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  12520114 tttgatccatgtagccgaccccacttagtgggataaggcttg 12520073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 17670698 - 17670739
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  17670698 tttgatccatgtagccgaccccacttagtgggataaggcttg 17670739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 25834908 - 25834949
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  25834908 tttgatccatgtagccgaccccacttagtgggataaggcttg 25834949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 28508908 - 28508949
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  28508908 tttgatccatgtagccgaccccacttagtgggataaggcttg 28508949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 30306262 - 30306303
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  30306262 tttgatccatgtagccgaccccacttagtgggataaggcttg 30306303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 35755297 - 35755256
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||    
T  35755297 tttgatccatgcagccgaccctacttagtgggataaggcttg 35755256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 38328422 - 38328381
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  38328422 tttgatccatgtagccgaccccacttagtgggataaggcttg 38328381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 41763095 - 41763054
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  41763095 tttgatccatgtagccgaccccacttagtgggataaggcttg 41763054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 43573182 - 43573141
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  43573182 tttgatccatgtagccgaccccacttagtgggataaggcttg 43573141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10516816 - 10516760
Alignment:
Q  1 aatattatcgcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||| ||||  |||||||||||||||||| |  ||||||||||| ||||||||    
T  10516816 aatattatggcgtaatttgatccatgtagctgatctcacttagtgggataaggcttg 10516760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 38430114 - 38430162
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttgttgttgt 64  Q
    ||||||||||||||| ||||| |||||||| || |||||||| ||||||    
T  38430114 tttgatccatgtagccgaccccacttagtgagataaggcttggtgttgt 38430162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000009; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 21089615 - 21089677
Alignment:
Q  4 attatcgcgttgtttgatccatgtagctgaccctacttagtgggaaaaggctt-gttgttgta 65  Q
    ||||| || |||||||||||||||||||| ||| ||||||||||| ||||||| |||||||||    
T  21089615 attatggcattgtttgatccatgtagctgcccccacttagtgggataaggcttggttgttgta 21089677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 34557 - 34516
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||    
T  34557 tttgatccatgtagctgaccccacttagtgggataagacttg 34516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 608391 - 608432
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||||||||||||||| ||| ||||    
T  608391 tttgatccatgtagccgaccctacttagtgggataagacttg 608432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 9707000 - 9707041
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  9707000 tttgatccatgtagccgaccccacttagtgggataaggcttg 9707041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 12890805 - 12890846
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  12890805 tttgatccatgtagccgaccccacttagtgggataaggcttg 12890846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 28085606 - 28085647
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  28085606 tttgatccatgtagccgaccccacttagtgggataaggcttg 28085647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 30789126 - 30789085
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| || |||||||||||||| ||||||||    
T  30789126 tttgatccatgtagccgatcctacttagtgggataaggcttg 30789085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 34934882 - 34934841
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  34934882 tttgatccatgtagccgaccccacttagtgggataaggcttg 34934841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 8364786 - 8364826
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggctt 56  Q
    ||||||||||||||| |||||  ||||||||||||||||||    
T  8364786 tttgatccatgtagccgaccccgcttagtgggaaaaggctt 8364826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000004; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 15588454 - 15588401
Alignment:
Q  4 attatcgcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||| |||| |||||||| ||||||| ||||||||||||||||| ||||||||    
T  15588454 attatggcgtcgtttgatctatgtagccgaccctacttagtgggataaggcttg 15588401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 38830550 - 38830586
Alignment:
Q  17 ttgatccatgtagctgaccctacttagtgggaaaagg 53  Q
    |||||||||||||||||||| ||||||||||||||||    
T  38830550 ttgatccatgtagctgaccccacttagtgggaaaagg 38830586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 13561438 - 13561395
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttgtt 59  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||||    
T  13561438 tttgatccatgtagccgaccccacttagtgggataaggcttgtt 13561395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 28411900 - 28411947
Alignment:
Q  10 gcgttgtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||||||| |||||||| ||||| ||||||||||| ||||||||    
T  28411900 gcgttgtttgattcatgtagccgaccccacttagtgggataaggcttg 28411947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 42272707 - 42272746
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggct 55  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  42272707 tttgatccatgtagctgaccccacttagtgggataaggct 42272746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 2645219 - 2645261
Alignment:
Q  15 gtttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||||||||||| | ||||||||||||||| ||||||||    
T  2645219 gtttgatccatgtagccggccctacttagtgggataaggcttg 2645261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 79747 - 79784
Alignment:
Q  20 atccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  79747 atccatgtagctggccccacttagtgggaaaaggcttg 79784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 408546 - 408505
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  408546 tttgatccatgtagccgaccccacttagtgggataaggcttg 408505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 2915548 - 2915507
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  2915548 tttgatccatgtagccgaccccacttagtgggataaggcttg 2915507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 3302074 - 3302115
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  3302074 tttgatccatgtagccgaccccacttagtgggataaggcttg 3302115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 4496614 - 4496655
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  4496614 tttgatccatgtagccgaccccacttagtgggataaggcttg 4496655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 5558371 - 5558412
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  5558371 tttgatccatgtagccgaccccacttagtgggataaggcttg 5558412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 5860064 - 5860105
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||    
T  5860064 tttgatctatgtagccgaccctacttagtgggataaggcttg 5860105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 7359313 - 7359272
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||    
T  7359313 tttgatccatgtagctgaccccacttagtgggacaagacttg 7359272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 11002476 - 11002423
Alignment:
Q  13 ttgtttgatccatgtagctgaccctacttagtgggaaaaggctt-gttgttgta 65  Q
    ||||||||| |||||||  ||||||||||||||||| ||||||| |||||||||    
T  11002476 ttgtttgattcatgtagtcgaccctacttagtgggataaggcttggttgttgta 11002423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 16347432 - 16347391
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||||||||||||||| ||| ||||    
T  16347432 tttgatccatgtagccgaccctacttagtgggataagacttg 16347391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 20457003 - 20457044
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  20457003 tttgatccatgtagccgaccccacttagtgggataaggcttg 20457044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 28985313 - 28985354
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  28985313 tttgatccatgtagccgaccccacttagtgggacaaggcttg 28985354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 29816612 - 29816653
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  29816612 tttgatccatgtagccgaccccacttagtgggataaggcttg 29816653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 30213805 - 30213846
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  30213805 tttgatccatgtagccgaccccacttagtgggataaggcttg 30213846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 38685197 - 38685238
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  38685197 tttgatccatgtagccgaccccacttagtgggataaggcttg 38685238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 42576240 - 42576281
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  42576240 tttgatccatgtagccgacccgacttagtgggataaggcttg 42576281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 219512 - 219480
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtggga 48  Q
    ||||||||||||||||||||||| |||||||||    
T  219512 tttgatccatgtagctgaccctatttagtggga 219480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 1287630 - 1287590
Alignment:
Q  17 ttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    |||||||||||||| ||||| ||||||||||| ||||||||    
T  1287630 ttgatccatgtagccgaccccacttagtgggataaggcttg 1287590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 561 - 602
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  561 tttgatccatgtagccgaccccacttagtgggataaggcttg 602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 1000 - 959
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||||||||| | ||||||||| ||||||||    
T  1000 tttgatccatgtagctgaccccatttagtgggataaggcttg 959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 28941 - 28900
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  28941 tttgatccatgtagccgaccccacttagtgggataaggcttg 28900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 31698 - 31739
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggcttg 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  31698 tttgatccatgtagccgaccccacttagtgggataaggcttg 31739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 58278 - 58238
Alignment:
Q  16 tttgatccatgtagctgaccctacttagtgggaaaaggctt 56  Q
    ||||||||||||||| ||||| ||||||||||| |||||||    
T  58278 tttgatccatgtagccgacccaacttagtgggataaggctt 58238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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