View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11386A_low_275 (Length: 257)

Name: NF11386A_low_275
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11386A_low_275
NF11386A_low_275
[»] chr7 (30 HSPs)
chr7 (2-229)||(21681249-21681478)
chr7 (1-232)||(21627746-21627978)
chr7 (122-232)||(21740671-21740781)
chr7 (1-147)||(21991458-21991603)
chr7 (103-223)||(21704307-21704426)
chr7 (1-232)||(21689035-21689259)
chr7 (1-232)||(21791645-21791869)
chr7 (5-161)||(21622745-21622893)
chr7 (8-232)||(21713825-21714048)
chr7 (14-80)||(21791512-21791578)
chr7 (1-80)||(21663875-21663954)
chr7 (2-80)||(21639468-21639546)
chr7 (1-80)||(21704425-21704502)
chr7 (5-80)||(21651859-21651934)
chr7 (14-80)||(21788002-21788068)
chr7 (158-230)||(21651734-21651806)
chr7 (163-232)||(21784566-21784635)
chr7 (172-232)||(21663698-21663758)
chr7 (164-232)||(21725571-21725639)
chr7 (167-222)||(21784691-21784746)
chr7 (164-222)||(21771645-21771703)
chr7 (176-231)||(21991408-21991463)
chr7 (43-80)||(21771759-21771796)
chr7 (43-80)||(21785163-21785200)
chr7 (180-231)||(21622693-21622744)
chr7 (169-207)||(21787911-21787949)
chr7 (43-80)||(21725694-21725731)
chr7 (146-232)||(21639321-21639404)
chr7 (198-232)||(21791419-21791453)
chr7 (43-79)||(21740895-21740931)
[»] scaffold0182 (2 HSPs)
scaffold0182 (164-232)||(34209-34277)
scaffold0182 (43-80)||(34332-34369)


Alignment Details
Target: chr7 (Bit Score: 134; Significance: 8e-70; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 21681478 - 21681249
Alignment:
Q  2 atgggctcagtgtagtgctttagattttcattctctcaaacctttacctaatgaacaagataagtaaatatgcttgcttcnnnnnnn--tgttacacttc 99  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||          | | |||||||    
T  21681478 atgggctcagggtagtgctttagtttttcatgctctcaaacctttacctaataaacaagataagtaaatatgcttgcttaaaaaaaaaatctcacacttc 21681379  T
Q  100 actttaatatattttttatacctgtcctctttgttactaaagtaacttgtcctcagagcaaactatataatgtccataactttactcaatggacaagaaa 199  Q
    ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| || ||||||||||||||||||||||    
T  21681378 actttaatagattttttatacctgtcctctttgctactaaagcaacttgtcctcagaacaaactatataatgtctatcactttactcaatggacaagaaa 21681279  T
Q  200 agtaaaattcatggaaaaaggatcattgct 229  Q
    |||||||||||||||||  ||||| |||||    
T  21681278 agtaaaattcatggaaattggatctttgct 21681249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 21627978 - 21627746
Alignment:
Q  1 tatgggctcagtgtagtgctttagattttcattctctcaaacctttacctaatgaacaagataagtaaatatgcttgcttcnnnnnnn-tgttacacttc 99  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||         | |||||||||    
T  21627978 tatggtctcagtgtagtgctttagattttcatgctctcaaacctttacctaatgagcaagataagtaaatatgcttgcttaaaacaaaatcttacacttc 21627879  T
Q  100 a-ctttaatatattttttatacctgtcctctttgttactaaagtaacttgtcctcagagcaaactatataatgtccataactttactcaatggacaagaa 198  Q
    | |||||||  |||||| ||||||||||||||   | ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||    
T  21627878 aactttaatcaattttt-atacctgtcctcttcactgctaaagtaacttgtcctcagaacaaactatataatgtccatcactttactcaacggacaagaa 21627780  T
Q  199 aagtaaaattcatggaaaaaggatcattgctttt 232  Q
    |||||||||||||||||| |||||| ||||||||    
T  21627779 aagtaaaattcatggaaataggatcgttgctttt 21627746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 21740781 - 21740671
Alignment:
Q  122 tgtcctctttgttactaaagtaacttgtcctcagagcaaactatataatgtccataactttactcaatggacaagaaaagtaaaattcatggaaaaagga 221  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21740781 tgtcctctttgttactaaagtaacttgtcctcataacaaactatataatgtccatcactttactcaatggacaagaaaagtaaaattcatggaaaaagga 21740682  T
Q  222 tcattgctttt 232  Q
    |||||||||||    
T  21740681 tcattgctttt 21740671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 21991603 - 21991458
Alignment:
Q  1 tatgggctcagtgtagtgctttagattttcattctctcaaacctttacctaatgaacaagataagtaaatatgcttgcttcnnnnnnntgttacacttca 100  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||    
T  21991603 tatgggttcagtgtagtgctttagattttcattctctcgaacctttacctaatgaacaagataagtaaatatgcttgctt-aaaaaaatgttacacttca 21991505  T
Q  101 ctttaatatattttttatacctgtcctctttgttactaaagtaactt 147  Q
    |||||||| ||||||||||| ||||||||||  ||||||||||||||    
T  21991504 ctttaatagattttttatacttgtcctctttactactaaagtaactt 21991458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 103 - 223
Target Start/End: Complemental strand, 21704426 - 21704307
Alignment:
Q  103 ttaatatattttttatacctgtcctctttgttactaaagtaacttgtcctcagagcaaactatataatgtccataactttactcaatggacaagaaaagt 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||| |||||||||||    
T  21704426 ttaatatattttttatacctgtcctctttgttactaaagtaacttgtcctcagaacaaa-tatataatgtccatcactttactcaatgtacaagaaaagt 21704328  T
Q  203 aaaattcatggaaaaaggatc 223  Q
    |||||||  ||||| ||||||    
T  21704327 aaaattctcggaaacaggatc 21704307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 21689259 - 21689035
Alignment:
Q  1 tatgggctcagtgtagtgctttagattttcattctctcaaacctttacctaatgaacaagataagtaaatatgcttgcttcnnnnnnntgttacactt-c 99  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||        | |||||||| |    
T  21689259 tatgggctcagtgtagtgctttagattttcatgctctcaaacctttacctaatgaacaagataagtaaatatgcttgctt----aaaatattacacttcc 21689164  T
Q  100 actttaatatattttttatacctgtcctctttgttactaaagtaacttgtcctcagagcaaactatataatgtccataactttactcaatggacaagaaa 199  Q
    ||||||| ||  |||||||||||||||||||   | |||||||||||||| ||| || | |||||    | |||||  |||| |||||||||  ||||||    
T  21689163 actttaa-atgatttttatacctgtcctcttcactgctaaagtaacttgttctcggaacgaacta---cacgtccaccacttaactcaatggggaagaaa 21689068  T
Q  200 agtaaaattcatggaaaaaggatcattgctttt 232  Q
    |||||||||||||||||| ||||  ||||||||    
T  21689067 agtaaaattcatggaaaagggatatttgctttt 21689035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 21791869 - 21791645
Alignment:
Q  1 tatgggctcagtgtagtgctttagattttcattctctcaaacctttacctaatgaacaagataagtaaatatgcttgcttcnnnnnnntgttacactt-c 99  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||        | |||||||| |    
T  21791869 tatgggctcagtgtagtgctttagattttcatgctttcaaacctttacctactgaacaagataagtaaatatgcttgctt----aaaatattacacttcc 21791774  T
Q  100 actttaatatattttttatacctgtcctctttgttactaaagtaacttgtcctcagagcaaactatataatgtccataactttactcaatggacaagaaa 199  Q
    |||||||| |  |||||||||||||||||||   | |||||||||||||| ||| || | |||||    | |||||  | || |||||||||| ||||||    
T  21791773 actttaat-tgatttttatacctgtcctcttcactgctaaagtaacttgttctcggaacgaacta---cacgtccaccagttaactcaatggagaagaaa 21791678  T
Q  200 agtaaaattcatggaaaaaggatcattgctttt 232  Q
    |||||||||||||||||| ||||  ||||||||    
T  21791677 agtaaaattcatggaaaagggatatttgctttt 21791645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 21622893 - 21622745
Alignment:
Q  5 ggctcagtgtagtgctttagattttcattctctcaaacctttacctaatgaacaagataagtaaatatgcttgcttcnnnnnnntgttacacttcacttt 104  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||         |||        | | ||||||||||||    
T  21622893 ggctcagtgtagtgctttagattttcatgctctcaaacctttacctaatgaacaagataagtaa--------cctttaaaaaaatctcacacttcacttt 21622802  T
Q  105 aatatattttttatacctgtcctctttgttactaaagtaacttgtcctcagagcaaa 161  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  21622801 aatagattttttatacctgtcctcttttttactaaagtaacttgtcctcagaacaaa 21622745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 232
Target Start/End: Complemental strand, 21714048 - 21713825
Alignment:
Q  8 tcagtgtagtgctttagattttcattctctcaaacctttacctaatgaacaagataagtaaatatgcttgcttcnnnnnnntgt--tacacttc-acttt 104  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||| ||||| |||        | |  || | ||| |||||    
T  21714048 tcagtgtagtgctttaaattttcatgctctcaaacctttacctaatgaacaagttaagtaaatctgctttcttaaaaaaactatcttaaatttcgacttt 21713949  T
Q  105 aatatattttttatacctgtcctctttgttactaaagtaacttgtcctcagagcaaactatataatgtccataactttactcaatggacaagaaaagtaa 204  Q
    |||| |||||| |||| |||||||||   | |||||||||||||||||| || | ||||||||   |||||   ||||||||||||||||||||||||||    
T  21713948 aataaattttt-atacttgtcctcttcactgctaaagtaacttgtcctcggaacgaactatat---gtccaccgctttactcaatggacaagaaaagtaa 21713853  T
Q  205 aattcatggaaaaaggatcattgctttt 232  Q
    |||||||||||||| |||| ||||||||    
T  21713852 aattcatggaaaaaagatctttgctttt 21713825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 21791578 - 21791512
Alignment:
Q  14 tagtgctttagattttcattctctcaaacctttacctaatgaacaagataagtaaatatgcttgctt 80  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21791578 tagtgctttagattttcatgctctcaaacctttacctaatgaacaagataagtaaatatgcttgctt 21791512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 21663954 - 21663875
Alignment:
Q  1 tatgggctcagtgtagtgctttagattttcattctctcaaacctttacctaatgaacaagataagtaaatatgcttgctt 80  Q
    |||||||||| |||| |||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21663954 tatgggctcactgtactgctttggattttttttctctcaaacctttacctaatgaacaagataagtaaatatgcttgctt 21663875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 21639546 - 21639468
Alignment:
Q  2 atgggctcagtgtagtgctttagattttcattctctcaaacctttacctaatgaacaagataagtaaatatgcttgctt 80  Q
    |||||||||||||||||||||| |||||||| ||||  || ||||||||||||||||||||||||||||||||||||||    
T  21639546 atgggctcagtgtagtgctttaaattttcatgctcttgaaactttacctaatgaacaagataagtaaatatgcttgctt 21639468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 21704502 - 21704425
Alignment:
Q  1 tatgggctcagtgtagtgctttagattttcattctctcaaacctttacctaatgaacaagataagtaaatatgcttgctt 80  Q
    ||||||||||| |||||||||||| |||||||||||  |||||||||||||||||||||||||| |||||||||||||||    
T  21704502 tatgggctcagcgtagtgctttagtttttcattctc--aaacctttacctaatgaacaagataactaaatatgcttgctt 21704425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 21651934 - 21651859
Alignment:
Q  5 ggctcagtgtagtgctttagattttcattctctcaaacctttacctaatgaacaagataagtaaatatgcttgctt 80  Q
    |||||||||||||||| ||||||| ||| ||| |||||||||||||||| ||||||||||||||||||||||||||    
T  21651934 ggctcagtgtagtgctctagatttccatgctcacaaacctttacctaattaacaagataagtaaatatgcttgctt 21651859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 21788068 - 21788002
Alignment:
Q  14 tagtgctttagattttcattctctcaaacctttacctaatgaacaagataagtaaatatgcttgctt 80  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  21788068 tagtgctttagtttttcatgctctcaaacctttacctaatgaacaagataactaaatatgcttgctt 21788002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 21651806 - 21651734
Alignment:
Q  158 caaactatataatgtccataactttactcaatggacaagaaaagtaaaattcatggaaaaaggatcattgctt 230  Q
    |||||||||||||||| |  |||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  21651806 caaactatataatgtctaccactttactcaatggacaagaaatgtaaaattcatggaaaaaggatctttgctt 21651734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 21784635 - 21784566
Alignment:
Q  163 tatataatgtccataactttactcaatggacaagaaaagtaaaattcatggaaaaaggatcattgctttt 232  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||  ||||||||    
T  21784635 tatataatgtccatcactttactcattggacaagaaaagtaaaattcacggaaaaaggatatttgctttt 21784566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 21663758 - 21663698
Alignment:
Q  172 tccataactttactcaatggacaagaaaagtaaaattcatggaaaaaggatcattgctttt 232  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21663758 tccatcactttgctcaatggacaagaaaagtaaaattcatggaaataggatcattgctttt 21663698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 21725639 - 21725571
Alignment:
Q  164 atataatgtccataactttactcaatggacaagaaaagtaaaattcatggaaaaaggatcattgctttt 232  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||  ||||||||    
T  21725639 atataatgtccatcactttactcattggacaagaaaagtaaaattcacagaaaaaggatatttgctttt 21725571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 222
Target Start/End: Complemental strand, 21784746 - 21784691
Alignment:
Q  167 taatgtccataactttactcaatggacaagaaaagtaaaattcatggaaaaaggat 222  Q
    |||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  21784746 taatgttcatcactttactcaatggacaagaaaagtaaaattcacggaaaaaggat 21784691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 21771703 - 21771645
Alignment:
Q  164 atataatgtccataactttactcaatggacaagaaaagtaaaattcatggaaaaaggat 222  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||    
T  21771703 atataatgtccatcactttactcattggacaagaaaagtaaaattcacagaaaaaggat 21771645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 21991463 - 21991408
Alignment:
Q  176 taactttactcaatggacaagaaaagtaaaattcatggaaaaaggatcattgcttt 231  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||  |||||||    
T  21991463 taactttactcaatagacaagaaaagtgaaattcatggaaaaaggatatttgcttt 21991408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 21771796 - 21771759
Alignment:
Q  43 ctttacctaatgaacaagataagtaaatatgcttgctt 80  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21771796 ctttacctaatgaacaagataagtaaatatgcttgctt 21771759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 21785200 - 21785163
Alignment:
Q  43 ctttacctaatgaacaagataagtaaatatgcttgctt 80  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21785200 ctttacctaatgaacaagataagtaaatatgcttgctt 21785163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 21622744 - 21622693
Alignment:
Q  180 tttactcaatggacaagaaaagtaaaattcatggaaaaaggatcattgcttt 231  Q
    ||||||| ||||||||||||||||||||||||||||| || ||| |||||||    
T  21622744 tttactcgatggacaagaaaagtaaaattcatggaaatagtatctttgcttt 21622693  T

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Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 21787949 - 21787911
Alignment:
Q  169 atgtccataactttactcaatggacaagaaaagtaaaat 207  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  21787949 atgtccatcactttactcaatggacaagaaaagtaaaat 21787911  T

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Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 21725731 - 21725694
Alignment:
Q  43 ctttacctaatgaacaagataagtaaatatgcttgctt 80  Q
    |||||||||||||||||||||||||||||||| |||||    
T  21725731 ctttacctaatgaacaagataagtaaatatgcgtgctt 21725694  T

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Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 232
Target Start/End: Complemental strand, 21639404 - 21639321
Alignment:
Q  146 ttgtcctcagagcaaactatataatgtccataactttactcaatggacaagaaaagtaaaattcatggaaaaaggatcattgctttt 232  Q
    ||||||||| | ||||||||||   |||||  ||||||||||||| |||| | |||||||||| ||| |||||||||| ||||||||    
T  21639404 ttgtcctcataacaaactatat---gtccaccactttactcaatgtacaaaataagtaaaattaatgaaaaaaggatctttgctttt 21639321  T

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Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 232
Target Start/End: Complemental strand, 21791453 - 21791419
Alignment:
Q  198 aaagtaaaattcatggaaaaaggatcattgctttt 232  Q
    |||||||||||||||||||||||||| ||||||||    
T  21791453 aaagtaaaattcatggaaaaaggatctttgctttt 21791419  T

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Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 21740931 - 21740895
Alignment:
Q  43 ctttacctaatgaacaagataagtaaatatgcttgct 79  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  21740931 ctttacctattgaagaagataagtaaatatgcttgct 21740895  T

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Target: scaffold0182 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 34277 - 34209
Alignment:
Q  164 atataatgtccataactttactcaatggacaagaaaagtaaaattcatggaaaaaggatcattgctttt 232  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||  ||||||||    
T  34277 atataatgtccatcactttactcattggacaagaaaagtaaaattcacagaaaaaggatatttgctttt 34209  T

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Target: scaffold0182; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 34369 - 34332
Alignment:
Q  43 ctttacctaatgaacaagataagtaaatatgcttgctt 80  Q
    |||||||||||||||||||||||||||||||| |||||    
T  34369 ctttacctaatgaacaagataagtaaatatgcgtgctt 34332  T

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