View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11386A_low_331 (Length: 248)
Name: NF11386A_low_331
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11386A_low_331 |
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Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 12 - 239
Target Start/End: Complemental strand, 8293848 - 8293621
Alignment:
| Q |
12 |
ataaaaacaacagaaacgtgtacattgcagaaactgataatcaatttaatcgtcacgagagaaaacaatactaacctaactattaacatactaatattct |
111 |
Q |
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| T |
8293848 |
ataaaaacaacagaaacgtgtacattgcagaaactgataatcaatttaatcgtcacgagagaaaacaatactaacctaactattaacatactaatattct |
8293749 |
T |
|
| Q |
112 |
acatttgttattnnnnnnntagcacctaaaccagagatgcaattaattatatggagatcaaatgcacatgacacggacgctatacaaaacgcagcaacaa |
211 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8293748 |
acatttgttattaaaaaaatagcacctaaaccagagatgcaattaattatatggagatcaaatgcacatgacacggacgctatacaaaacgcagcaacaa |
8293649 |
T |
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| Q |
212 |
aatatctggaatcagagaaattaacacg |
239 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
8293648 |
aatatctggaatcagagaaattaacacg |
8293621 |
T |
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