View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11386A_low_333 (Length: 247)
Name: NF11386A_low_333
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11386A_low_333 |
 |  |
|
| [»] scaffold0197 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 34562803 - 34562570
Alignment:
| Q |
1 |
tgatctcaagccggatttcagattccagagccatgcggttctcgcacttcaggaagcagcggaagcatatttggttggtttgtttgaggataccaatttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34562803 |
tgatctcaagccggatttcagattccagagtcatgcggttctcgcacttcaggaagcagcggaagcatatttggttggtttgtttgaggataccaatttg |
34562704 |
T |
 |
| Q |
101 |
tgtgcaattcatgctaagagggttaccattatgcctaaggatattcaacttgctcgccgtatccgtggtgaacgtcgtggttaggtttattgactagtta |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
34562703 |
tgtgcaattcatgctaagagggttaccattatgcctaaggatattcaacttgcttgccgtatccgtggtgaacgtcgtggttagggttattgactagtta |
34562604 |
T |
 |
| Q |
201 |
gtattatgtgttgtattgttctgatttagggttc |
234 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
34562603 |
gtattatgtgttgtattgttctgatttagggttc |
34562570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 34571592 - 34571423
Alignment:
| Q |
6 |
tcaagccggatttcagattccagagccatgcggttctcgcacttcaggaagcagcggaagcatatttggttggtttgtttgaggataccaatttgtgtgc |
105 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34571592 |
tcaagacggatttacgattccagagccatgcggttctcgcacttcaggaagcagcggaagcatatttggttggtttgtttgaggataccaatttgtgtgc |
34571493 |
T |
 |
| Q |
106 |
aattcatgctaagagggttaccattatgcctaaggatattcaacttgctcgccgtatccgtggtgaacgt |
175 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34571492 |
aattcatgctaagagggttaccattatgcctaaggatattcaacttgctcgccgtatccgtggtgaacgt |
34571423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 174
Target Start/End: Complemental strand, 34579052 - 34578892
Alignment:
| Q |
14 |
gatttcagattccagagccatgcggttctcgcacttcaggaagcagcggaagcatatttggttggtttgtttgaggataccaatttgtgtgcaattcatg |
113 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34579052 |
gatttgagattccagagccatgcagttctcgcacttcaggaagcagtggaagcttatttggttggtttgtttgaggataccaatttgtgtgcaattcatg |
34578953 |
T |
 |
| Q |
114 |
ctaagagggttaccattatgcctaaggatattcaacttgctcgccgtatccgtggtgaacg |
174 |
Q |
| |
|
|||||||| | ||| ||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
34578952 |
ctaagaggatcaccgttatggtgaaggatattcaacttgctcgtcgtatccgtggtgaacg |
34578892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 174
Target Start/End: Complemental strand, 34584801 - 34584641
Alignment:
| Q |
14 |
gatttcagattccagagccatgcggttctcgcacttcaggaagcagcggaagcatatttggttggtttgtttgaggataccaatttgtgtgcaattcatg |
113 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34584801 |
gatttgagattccagagccatgcagttctcgcacttcaggaagcagtggaagcttatttggttggtttgtttgaggataccaatttgtgtgcaattcatg |
34584702 |
T |
 |
| Q |
114 |
ctaagagggttaccattatgcctaaggatattcaacttgctcgccgtatccgtggtgaacg |
174 |
Q |
| |
|
|||||||| | ||| ||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
34584701 |
ctaagaggatcaccgttatggtgaaggatattcaacttgctcgtcgtatccgtggtgaacg |
34584641 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 13576371 - 13576477
Alignment:
| Q |
47 |
cttcaggaagcagcggaagcatatttggttggtttgtttgaggataccaatttgtgtgcaattcatgctaagagggttaccattatgcctaaggatattc |
146 |
Q |
| |
|
||||| ||||| || ||||| ||| | |||||||||||||||||||| ||| | ||||| |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
13576371 |
cttcaagaagctgctgaagcttatcttgttggtttgtttgaggatacgaatctttgtgctattcatgctaagagggttactattatgcctaaggatattc |
13576470 |
T |
 |
| Q |
147 |
aacttgc |
153 |
Q |
| |
|
||||||| |
|
|
| T |
13576471 |
aacttgc |
13576477 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 234
Target Start/End: Complemental strand, 34571343 - 34571313
Alignment:
| Q |
204 |
ttatgtgttgtattgttctgatttagggttc |
234 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
34571343 |
ttatgtgttgtattgttctgatttagggttc |
34571313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 118; Significance: 3e-60; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 41943926 - 41944095
Alignment:
| Q |
6 |
tcaagccggatttcagattccagagccatgcggttctcgcacttcaggaagcagcggaagcatatttggttggtttgtttgaggataccaatttgtgtgc |
105 |
Q |
| |
|
||||| ||||| ||||||||||||||||||| ||||| ||||||||||||||||| ||||| ||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
41943926 |
tcaagacggatctcagattccagagccatgctgttcttgcacttcaggaagcagcagaagcttatctggttggattgtttgaggataccaatttgtgtgc |
41944025 |
T |
 |
| Q |
106 |
aattcatgctaagagggttaccattatgcctaaggatattcaacttgctcgccgtatccgtggtgaacgt |
175 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||| |||||||||||| |
|
|
| T |
41944026 |
aattcatgctaagagggttacaattatgccaaaggacattcaacttgcacgccgtattcgtggtgaacgt |
41944095 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 25865696 - 25865851
Alignment:
| Q |
20 |
agattccagagccatgcggttctcgcacttcaggaagcagcggaagcatatttggttggtttgtttgaggataccaatttgtgtgcaattcatgctaaga |
119 |
Q |
| |
|
||||| ||||| ||||| ||||| |||||||||||||| || || || ||| | || || |||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
25865696 |
agatttcagagtcatgctgttcttgcacttcaggaagctgctgaggcttatcttgtgggattgtttgaggatactaatttgtgtgcaattcatgctaaga |
25865795 |
T |
 |
| Q |
120 |
gggttaccattatgcctaaggatattcaacttgctcgccgtatccgtggtgaacgt |
175 |
Q |
| |
|
|||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||| |
|
|
| T |
25865796 |
gggtaacgattatgccaaaggatattcagcttgctcgtcgtattcgtggtgaacgt |
25865851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 147
Target Start/End: Original strand, 44343977 - 44344078
Alignment:
| Q |
46 |
acttcaggaagcagcggaagcatatttggttggtttgtttgaggataccaatttgtgtgcaattcatgctaagagggttaccattatgcctaaggatatt |
145 |
Q |
| |
|
||||||||||||||| || || ||| | || || |||||||||||||||||||||||||| ||||||||||||||||| || |||||||| ||||||||| |
|
|
| T |
44343977 |
acttcaggaagcagctgaggcttatctcgtgggattgtttgaggataccaatttgtgtgctattcatgctaagagggtgacgattatgcccaaggatatt |
44344076 |
T |
 |
| Q |
146 |
ca |
147 |
Q |
| |
|
|| |
|
|
| T |
44344077 |
ca |
44344078 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 43479779 - 43479673
Alignment:
| Q |
47 |
cttcaggaagcagcggaagcatatttggttggtttgtttgaggataccaatttgtgtgcaattcatgctaagagggttaccattatgcctaaggatattc |
146 |
Q |
| |
|
||||| ||||| || ||||| ||| | |||||||||||||| ||||| || | || || |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
43479779 |
cttcaagaagccgctgaagcttatcttgttggtttgtttgaagatactaacctttgcgctattcatgctaagagggttacaattatgcctaaggatattc |
43479680 |
T |
 |
| Q |
147 |
aacttgc |
153 |
Q |
| |
|
||||||| |
|
|
| T |
43479679 |
aacttgc |
43479673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 26592197 - 26592312
Alignment:
| Q |
53 |
gaagcagcggaagcatatttggttggtttgtttgaggataccaatttgtgtgcaattcatgctaagagggttaccattatgcctaaggatattcaacttg |
152 |
Q |
| |
|
||||| ||||| || ||| | ||||| |||||||||||||| || | || || |||||||||||| | ||||| || ||||||||||||||||| |||| |
|
|
| T |
26592197 |
gaagcggcggaggcttatcttgttggattgtttgaggatactaacctctgcgctattcatgctaagcgtgttactatcatgcctaaggatattcagcttg |
26592296 |
T |
 |
| Q |
153 |
ctcgccgtatccgtgg |
168 |
Q |
| |
|
|| | ||||||||||| |
|
|
| T |
26592297 |
ctaggcgtatccgtgg |
26592312 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 38807043 - 38807125
Alignment:
| Q |
71 |
ttggttggtttgtttgaggataccaatttgtgtgcaattcatgctaagagggttaccattatgcctaaggatattcaacttgc |
153 |
Q |
| |
|
||||||||| | |||||||| || ||| ||| ||||||||||||||||| ||||| || ||||||||||| ||||||||||| |
|
|
| T |
38807043 |
ttggttggtctctttgaggacacaaatccgtgcgcaattcatgctaagagagttactatcatgcctaaggacattcaacttgc |
38807125 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 38799518 - 38799624
Alignment:
| Q |
47 |
cttcaggaagcagcggaagcatatttggttggtttgtttgaggataccaatttgtgtgcaattcatgctaagagggttaccattatgcctaaggatattc |
146 |
Q |
| |
|
||||| ||||| || ||||| || ||||||||| | ||||| || || || | |||||||||||||||||||| ||||| || ||||||||||| |||| |
|
|
| T |
38799518 |
cttcaagaagctgctgaagcttacttggttggtctctttgaagacacaaacctttgtgcaattcatgctaagagagttacaatcatgcctaaggacattc |
38799617 |
T |
 |
| Q |
147 |
aacttgc |
153 |
Q |
| |
|
| ||||| |
|
|
| T |
38799618 |
agcttgc |
38799624 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 38821999 - 38821893
Alignment:
| Q |
47 |
cttcaggaagcagcggaagcatatttggttggtttgtttgaggataccaatttgtgtgcaattcatgctaagagggttaccattatgcctaaggatattc |
146 |
Q |
| |
|
||||| ||||| || ||||| || ||||||||| | ||||| || || || | |||||||||||||||||||| ||||| || ||||||||||| |||| |
|
|
| T |
38821999 |
cttcaagaagctgctgaagcttacttggttggtctctttgaagacacaaacctttgtgcaattcatgctaagagagttacaatcatgcctaaggacattc |
38821900 |
T |
 |
| Q |
147 |
aacttgc |
153 |
Q |
| |
|
| ||||| |
|
|
| T |
38821899 |
agcttgc |
38821893 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 7594263 - 7594108
Alignment:
| Q |
20 |
agattccagagccatgcggttctcgcacttcaggaagcagcggaagcatatttggttggtttgtttgaggataccaatttgtgtgcaattcatgctaaga |
119 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||||||| || || || ||||||| ||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
7594263 |
agattccagagccatgcagttcttgcacttcaggaagcagctgaggcttacctggttggattgtttgaggacaccaatctgtgtgcaattcatgctaaga |
7594164 |
T |
 |
| Q |
120 |
gggttaccattatgcctaaggatattcaacttgctcgccgtatccgtggtgaacgt |
175 |
Q |
| |
|
|||| || |||||||| ||||||||||| |||||||| || || |||||||||||| |
|
|
| T |
7594163 |
gggtgacaattatgccaaaggatattcagcttgctcgtcgcattcgtggtgaacgt |
7594108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 157
Target Start/End: Complemental strand, 12547104 - 12546994
Alignment:
| Q |
47 |
cttcaggaagcagcggaagcatatttggttggtttgtttgaggataccaatttgtgtgcaattcatgctaagagggttaccattatgcctaaggatattc |
146 |
Q |
| |
|
||||| ||||| || ||||| ||| | |||||||||||||| ||||| ||| | ||||| |||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
12547104 |
cttcaagaagctgctgaagcttatcttgttggtttgtttgaagatactaatctctgtgccattcatgctaagagggttactatcatgcctaaggatattc |
12547005 |
T |
 |
| Q |
147 |
aacttgctcgc |
157 |
Q |
| |
|
||||||||||| |
|
|
| T |
12547004 |
aacttgctcgc |
12546994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 157
Target Start/End: Original strand, 12531515 - 12531625
Alignment:
| Q |
47 |
cttcaggaagcagcggaagcatatttggttggtttgtttgaggataccaatttgtgtgcaattcatgctaagagggttaccattatgcctaaggatattc |
146 |
Q |
| |
|
||||| ||||| || ||||| ||| | |||||||||||||| ||||| ||| | ||||| |||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
12531515 |
cttcaagaagctgctgaagcttatcttgttggtttgtttgaagatactaatctctgtgccattcatgctaagagggttactatcatgcctaaggatattc |
12531614 |
T |
 |
| Q |
147 |
aacttgctcgc |
157 |
Q |
| |
|
|||| |||||| |
|
|
| T |
12531615 |
aactcgctcgc |
12531625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 145
Target Start/End: Original strand, 9870019 - 9870102
Alignment:
| Q |
62 |
gaagcatatttggttggtttgtttgaggataccaatttgtgtgcaattcatgctaagagggttaccattatgcctaaggatatt |
145 |
Q |
| |
|
||||| ||||| |||||||||||| | |||| ||| | || || |||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
9870019 |
gaagcttattttgttggtttgttttaagatattaatctttgcgctattcatgctaagagagttactattatgcctaaggatatt |
9870102 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 9866735 - 9866659
Alignment:
| Q |
74 |
gttggtttgtttgaggataccaatttgtgtgcaattcatgctaagagggttaccattatgcctaaggatattcaact |
150 |
Q |
| |
|
|||||||||||||| ||||| || | ||||| |||||||||||||| ||||| ||||||||| |||| || ||||| |
|
|
| T |
9866735 |
gttggtttgtttgaagatactaacctttgtgctattcatgctaagagagttactattatgcctgaggacatccaact |
9866659 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0197 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0197
Description:
Target: scaffold0197; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 31005 - 31140
Alignment:
| Q |
18 |
tcagattccagagccatgcggttctcgcacttcaggaagcagcggaagcatatttggttggtttgtttgaggataccaatttgtgtgcaattcatgctaa |
117 |
Q |
| |
|
|||||||||||||| ||| ||| || ||||| ||||| || ||||| ||| | |||||||||||||| ||||| ||| | || || ||||||||||| |
|
|
| T |
31005 |
tcagattccagagcagtgctgtttctgctcttcaagaagctgctgaagcttatcttgttggtttgtttgaagatacaaatctttgcgctattcatgctaa |
31104 |
T |
 |
| Q |
118 |
gagggttaccattatgcctaaggatattcaacttgc |
153 |
Q |
| |
|
||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
31105 |
gagagttactattatgcctaaggatattcaacttgc |
31140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 21317568 - 21317703
Alignment:
| Q |
18 |
tcagattccagagccatgcggttctcgcacttcaggaagcagcggaagcatatttggttggtttgtttgaggataccaatttgtgtgcaattcatgctaa |
117 |
Q |
| |
|
|||||||||||||| ||| ||| || ||||| ||||| || ||||| ||| | |||||||||||||| ||||| ||| | || || ||||||||||| |
|
|
| T |
21317568 |
tcagattccagagcagtgctgtttctgctcttcaagaagcggctgaagcttatcttgttggtttgtttgaagatacaaatctttgcgctattcatgctaa |
21317667 |
T |
 |
| Q |
118 |
gagggttaccattatgcctaaggatattcaacttgc |
153 |
Q |
| |
|
||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
21317668 |
gagagttactattatgcctaaggatattcaacttgc |
21317703 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 3930066 - 3929960
Alignment:
| Q |
47 |
cttcaggaagcagcggaagcatatttggttggtttgtttgaggataccaatttgtgtgcaattcatgctaagagggttaccattatgcctaaggatattc |
146 |
Q |
| |
|
||||| ||||| || ||||| ||| | |||||||||||||| ||||| ||| | ||||| |||||||||||||| ||||| |||||||| |||||||||| |
|
|
| T |
3930066 |
cttcaagaagctgctgaagcgtatcttgttggtttgtttgaagatacgaatctttgtgccattcatgctaagagagttactattatgccgaaggatattc |
3929967 |
T |
 |
| Q |
147 |
aacttgc |
153 |
Q |
| |
|
||||||| |
|
|
| T |
3929966 |
aacttgc |
3929960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 3928687 - 3928608
Alignment:
| Q |
74 |
gttggtttgtttgaggataccaatttgtgtgcaattcatgctaagagggttaccattatgcctaaggatattcaacttgc |
153 |
Q |
| |
|
|||||||||||||| |||| ||| | ||||| |||||||||||||| ||||| ||| |||||||||||||| ||||||| |
|
|
| T |
3928687 |
gttggtttgtttgaagatatgaatctttgtgctattcatgctaagagagttactattgtgcctaaggatattaaacttgc |
3928608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 157
Target Start/End: Original strand, 24860629 - 24860679
Alignment:
| Q |
107 |
attcatgctaagagggttaccattatgcctaaggatattcaacttgctcgc |
157 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||||||||| |||||| |
|
|
| T |
24860629 |
attcatgctaagagagttaccattatgcccaaggatattcaactcgctcgc |
24860679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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