View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11386A_low_339 (Length: 246)

Name: NF11386A_low_339
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11386A_low_339
NF11386A_low_339
[»] chr4 (12 HSPs)
chr4 (12-246)||(33898427-33898660)
chr4 (26-246)||(16384412-16384631)
chr4 (25-246)||(18601078-18601298)
chr4 (25-246)||(23399614-23399834)
chr4 (25-245)||(28019824-28020043)
chr4 (23-242)||(25117375-25117593)
chr4 (43-246)||(15161902-15162104)
chr4 (46-232)||(15699768-15699953)
chr4 (28-93)||(10724787-10724851)
chr4 (28-93)||(10938556-10938620)
chr4 (153-242)||(19183106-19183195)
chr4 (184-239)||(33746597-33746653)
[»] scaffold0359 (1 HSPs)
scaffold0359 (23-246)||(2409-2631)
[»] chr2 (6 HSPs)
chr2 (23-246)||(22611410-22611632)
chr2 (25-246)||(12911013-12911233)
chr2 (25-246)||(23759145-23759365)
chr2 (37-246)||(24789577-24789785)
chr2 (185-234)||(15329001-15329050)
chr2 (198-246)||(21531071-21531119)
[»] scaffold0024 (1 HSPs)
scaffold0024 (18-244)||(159585-159810)
[»] chr6 (33 HSPs)
chr6 (18-244)||(17855709-17855934)
chr6 (23-244)||(23879404-23879624)
chr6 (18-244)||(33666306-33666530)
chr6 (18-246)||(9281128-9281355)
chr6 (28-246)||(17235119-17235335)
chr6 (25-246)||(17527302-17527522)
chr6 (28-244)||(19100422-19100636)
chr6 (28-246)||(19077668-19077884)
chr6 (18-243)||(19894089-19894315)
chr6 (44-244)||(13869822-13870021)
chr6 (44-246)||(13195864-13196065)
chr6 (28-242)||(20465316-20465528)
chr6 (44-246)||(21705948-21706149)
chr6 (44-246)||(19171956-19172156)
chr6 (28-246)||(20653594-20653810)
chr6 (28-242)||(20989212-20989424)
chr6 (44-246)||(21722825-21723026)
chr6 (20-246)||(12028561-12028785)
chr6 (28-246)||(12039128-12039342)
chr6 (51-246)||(17863892-17864086)
chr6 (18-246)||(8465085-8465315)
chr6 (145-246)||(25970317-25970418)
chr6 (145-246)||(25974757-25974858)
chr6 (28-238)||(25805933-25806141)
chr6 (27-149)||(25969864-25969984)
chr6 (27-149)||(25974304-25974424)
chr6 (44-239)||(23882123-23882317)
chr6 (28-179)||(17876239-17876388)
chr6 (46-239)||(29253107-29253299)
chr6 (28-100)||(28623142-28623213)
chr6 (183-234)||(15930278-15930329)
chr6 (184-239)||(24542333-24542388)
chr6 (46-92)||(15930419-15930465)
[»] chr7 (16 HSPs)
chr7 (25-246)||(11520830-11521050)
chr7 (25-242)||(645657-645870)
chr7 (25-229)||(14165687-14165889)
chr7 (44-244)||(16207301-16207500)
chr7 (28-246)||(4459264-4459480)
chr7 (44-242)||(15438617-15438813)
chr7 (28-246)||(29545559-29545775)
chr7 (28-242)||(20992068-20992280)
chr7 (28-242)||(12326336-12326549)
chr7 (28-145)||(11588989-11589105)
chr7 (110-242)||(15506835-15506967)
chr7 (44-149)||(11999421-11999525)
chr7 (122-244)||(16221993-16222115)
chr7 (46-243)||(16437317-16437513)
chr7 (46-246)||(14927190-14927386)
chr7 (46-246)||(15350656-15350852)
[»] scaffold0103 (1 HSPs)
scaffold0103 (18-246)||(25096-25323)
[»] chr1 (13 HSPs)
chr1 (18-246)||(13165908-13166135)
chr1 (25-242)||(26971818-26972034)
chr1 (28-243)||(4246561-4246776)
chr1 (18-246)||(20840682-20840908)
chr1 (28-246)||(20200507-20200721)
chr1 (28-244)||(11667323-11667537)
chr1 (18-244)||(24986498-24986722)
chr1 (172-243)||(22891222-22891293)
chr1 (127-246)||(15803555-15803674)
chr1 (52-239)||(23477360-23477546)
chr1 (184-234)||(12753739-12753789)
chr1 (153-239)||(17850852-17850938)
chr1 (44-90)||(17850949-17850995)
[»] scaffold0185 (1 HSPs)
scaffold0185 (36-246)||(1786-1995)
[»] chr8 (10 HSPs)
chr8 (18-246)||(22485647-22485874)
chr8 (44-246)||(23540825-23541026)
chr8 (32-246)||(45136640-45136852)
chr8 (28-242)||(27924875-27925087)
chr8 (28-246)||(33977585-33977800)
chr8 (18-135)||(22476694-22476810)
chr8 (28-246)||(33962267-33962474)
chr8 (79-240)||(26536861-26537022)
chr8 (176-246)||(22476808-22476878)
chr8 (183-239)||(18622339-18622395)
[»] chr3 (18 HSPs)
chr3 (25-243)||(24196046-24196263)
chr3 (25-246)||(17135563-17135783)
chr3 (25-246)||(23953976-23954196)
chr3 (25-244)||(18482793-18483011)
chr3 (18-246)||(13791191-13791418)
chr3 (25-246)||(7028489-7028709)
chr3 (25-246)||(1918662-1918882)
chr3 (44-236)||(18548188-18548379)
chr3 (48-246)||(19634424-19634619)
chr3 (64-244)||(15572423-15572602)
chr3 (44-246)||(13515037-13515238)
chr3 (46-246)||(295983-296182)
chr3 (44-238)||(18063633-18063826)
chr3 (30-160)||(44453009-44453137)
chr3 (46-233)||(28051680-28051870)
chr3 (205-246)||(20627061-20627102)
chr3 (127-239)||(21253422-21253534)
chr3 (184-239)||(17042179-17042234)
[»] chr5 (16 HSPs)
chr5 (18-246)||(22404179-22404407)
chr5 (25-246)||(24190384-24190604)
chr5 (18-242)||(22245781-22246004)
chr5 (18-246)||(22251459-22251686)
chr5 (28-246)||(23419975-23420191)
chr5 (28-246)||(9421934-9422150)
chr5 (28-244)||(23757677-23757891)
chr5 (28-244)||(23823133-23823347)
chr5 (25-176)||(25104948-25105098)
chr5 (25-176)||(25164041-25164191)
chr5 (46-245)||(38405903-38406101)
chr5 (30-244)||(26037307-26037517)
chr5 (46-246)||(30605109-30605309)
chr5 (49-246)||(22082109-22082305)
chr5 (46-231)||(26328648-26328832)
chr5 (53-234)||(18221658-18221838)
[»] scaffold0037 (1 HSPs)
scaffold0037 (36-246)||(109677-109886)
[»] scaffold0059 (1 HSPs)
scaffold0059 (27-246)||(47810-48028)
[»] scaffold0088 (1 HSPs)
scaffold0088 (47-243)||(37133-37328)
[»] scaffold0129 (1 HSPs)
scaffold0129 (110-244)||(16110-16244)
[»] scaffold0259 (1 HSPs)
scaffold0259 (28-245)||(16745-16960)
[»] scaffold0453 (1 HSPs)
scaffold0453 (110-244)||(1421-1555)
[»] scaffold0213 (1 HSPs)
scaffold0213 (28-242)||(8001-8214)
[»] scaffold0226 (3 HSPs)
scaffold0226 (28-246)||(17543-17759)
scaffold0226 (28-246)||(26937-27153)
scaffold0226 (44-246)||(6956-7157)
[»] scaffold0190 (1 HSPs)
scaffold0190 (28-242)||(16043-16255)
[»] scaffold0004 (1 HSPs)
scaffold0004 (25-121)||(356838-356933)
[»] scaffold0069 (2 HSPs)
scaffold0069 (119-242)||(9288-9411)
scaffold0069 (28-109)||(6432-6512)
[»] scaffold0003 (1 HSPs)
scaffold0003 (46-243)||(26947-27143)
[»] scaffold0006 (1 HSPs)
scaffold0006 (184-242)||(88425-88483)
[»] scaffold0480 (1 HSPs)
scaffold0480 (55-92)||(11732-11769)


Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 12 - 246
Target Start/End: Complemental strand, 33898660 - 33898427
Alignment:
Q  12 tggacatcagtaaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattc 111  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |    
T  33898660 tggacttcagtaaaatgcagatcagttcagcttaatctgcaaaacaagaatcataaacaaatctggaaagtcctaaaatgtcggaacatttataggat-c 33898562  T
Q  112 gttccaaacaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagt 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33898561 gttccaaacaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagt 33898462  T
Q  212 taaggaaatattgtttccttaaacaataaagggcg 246  Q
    |||||||||||||||||||||||||||||||||||    
T  33898461 taaggaaatattgtttccttaaacaataaagggcg 33898427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 16384412 - 16384631
Alignment:
Q  26 atgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataa 125  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||||||||||| |||||||||||||||    
T  16384412 atgcagatcggttcagcttaatctgcaaaacaagaatcagaaacaaatttgggaagtcctaaaatgttggaacatttataggat-cgttccaaacaataa 16384510  T
Q  126 taaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  16384511 taaatatttcctaaaatataaaatacactttagaaatattccacaactgattcttagaagatatgcgtgttgtttgatcaataagttaaggaaatattgt 16384610  T
Q  226 ttccttaaacaataaagggcg 246  Q
    |||||||||||||||||||||    
T  16384611 ttccttaaacaataaagggcg 16384631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 18601298 - 18601078
Alignment:
Q  25 aatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaata 124  Q
    ||||||||||  |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||| |||| ||||| |||    
T  18601298 aatgcagatcgattcagcttaatctgcaaaacaagaatcataaacaaatatggaaagtcctaaaatgtcggaacatttataggat-cgtttcaaactata 18601200  T
Q  125 ataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattg 224  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18601199 ataaatatttcctaaagtataaaatacactttagaaatatttcacagctgattcttagaagatatgcgcgttgcttgatcaataagttaagtaaatattg 18601100  T
Q  225 tttccttaaacaataaagggcg 246  Q
    ||||||||||||||||||||||    
T  18601099 tttccttaaacaataaagggcg 18601078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 23399834 - 23399614
Alignment:
Q  25 aatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaata 124  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||| ||||||||||||||    
T  23399834 aatgcagatcggttcagcttaatctgcaaaacaagaatcagaaacaaatttggaaagtcctaaaatgtcagaacatttataggat-cgttccaaacaata 23399736  T
Q  125 ataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattg 224  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  23399735 ttaaatatttcctaaaatataaaatacactttagaaatattctacagctgattcttagataatatgtgcgttgcttgatcaataagttaaggaaatattg 23399636  T
Q  225 tttccttaaacaataaagggcg 246  Q
    |||||||||| |||||||||||    
T  23399635 tttccttaaataataaagggcg 23399614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 25 - 245
Target Start/End: Original strand, 28019824 - 28020043
Alignment:
Q  25 aatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaata 124  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||    
T  28019824 aatgtagatcggtttagcttaatctgcaaaacaagaatcagaaacaaatctgaaaagtcctaaaatgtcggaacatttataggat-cgttccaaacaata 28019922  T
Q  125 ataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattg 224  Q
     ||||||||||||||||||||||||||||||||||||||||  | |||||||||||||| ||||||| |||||||||||||||||||||| ||||||||     
T  28019923 ttaaatatttcctaaaatataaaatacactttagaaatattttatagctgattcttagatgatatgcacgttgcttgatcaataagttaaagaaatatta 28020022  T
Q  225 tttccttaaacaataaagggc 245  Q
    |||||||||||||||||||||    
T  28020023 tttccttaaacaataaagggc 28020043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 23 - 242
Target Start/End: Original strand, 25117375 - 25117593
Alignment:
Q  23 aaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaa 122  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||    
T  25117375 aaaatgcagatcggttcagcttaatttgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcggaacatttataggat-cgttccaaaaaa 25117473  T
Q  123 taataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatat 222  Q
    || ||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||||| ||||||   |||||||||||||||||||||||||||||    
T  25117474 tattaagtatttcttaaaatataaaatacactttagaaatattccaaagccgattcttagatgatatgaatgttgcttgatcaataagttaaggaaatat 25117573  T
Q  223 tgtttccttaaacaataaag 242  Q
    ||||||||||||||||||||    
T  25117574 tgtttccttaaacaataaag 25117593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 43 - 246
Target Start/End: Complemental strand, 15162104 - 15161902
Alignment:
Q  43 ttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaat 142  Q
    ||||| ||||||||| |||||| ||| |||| ||||||||||||||||||||   ||| | ||||| || | |||| |||||| ||||||||||||||||    
T  15162104 ttaatttgcaaaacatgaatcataaaaaaatatggaaagtcctaaaatgtcgggtcatctttaggaatc-tcccaaccaataacaaatatttcctaaaat 15162006  T
Q  143 ataaaatac-actttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaa 241  Q
    ||||| ||| ||||||||||||||||||||||||||||   |||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  15162005 ataaa-tactactttagaaatattccacagctgattctgtaaagatatgtgcgttgcttggtcaataagataaggaaatattgtttccttaaacaataaa 15161907  T
Q  242 gggcg 246  Q
    |||||    
T  15161906 gggcg 15161902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 232
Target Start/End: Complemental strand, 15699953 - 15699768
Alignment:
Q  46 atctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaatata 145  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||| | ||||| | |||||  ||| | ||||||    ||||||||||||||||||     
T  15699953 atctgcaaaacaagaatcagagacaaatatggaaagtcctaaaatgtaggaacatctttagga-gcgtccaaaacaacttcaaatatttcctaaaatatg 15699855  T
Q  146 aaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttcctta 232  Q
    ||    ||||||| ||||||||| ||||||||| |  |||||||||| ||| |||| |||||||| |||| | |||| |||||||||    
T  15699854 aacacaactttaggaatattccaaagctgattcattaaagatatgcgtgtttcttggtcaataagataagaatatatggtttcctta 15699768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 10724787 - 10724851
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtc 93  Q
    ||||||| |||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||    
T  10724787 gcagatcggttcagct-aatctgcaaaacaagaatcaaaaacaaatatggaaagtcctaaaatgtc 10724851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 10938556 - 10938620
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtc 93  Q
    ||||||| |||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||    
T  10938556 gcagatcggttcagct-aatctgcaaaacaagaatcaaaaacaaatatggaaagtcctaaaatgtc 10938620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 19183195 - 19183106
Alignment:
Q  153 ctttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaag 242  Q
    |||||| |||||| |||| |||||||| | |||||||| |||||| ||| |||| ||| ||||||||||| ||||||||||| |||||||    
T  19183195 ctttaggaatattacacaactgattctgaaaagatatgtgcgttgtttggtcaagaagataaggaaatatggtttccttaaataataaag 19183106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 33746597 - 33746653
Alignment:
Q  184 agatatgcgcgtt-gcttgatcaataagttaaggaaatattgtttccttaaacaata 239  Q
    ||||||||||||| ||||| ||| |||| ||||||||||| ||||||||||| ||||    
T  33746597 agatatgcgcgtttgcttggtcagtaagataaggaaatatggtttccttaaataata 33746653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 23 - 246
Target Start/End: Original strand, 2409 - 2631
Alignment:
Q  23 aaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaa 122  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  2409 aaaatgcagatcggttcagcttaacctgcaaagcaagaatcagaaacaaatcaggaaagtcctaaaatgtcggaacatctataggat-cgttccaaacaa 2507  T
Q  123 taataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatat 222  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2508 taataaatatttcctaaaatatataatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatat 2607  T
Q  223 tgtttccttaaacaataaagggcg 246  Q
    ||||||||||||||||||||||||    
T  2608 tgtttccttaaacaataaagggcg 2631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 23 - 246
Target Start/End: Original strand, 22611410 - 22611632
Alignment:
Q  23 aaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaa 122  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||| ||| ||||||||||||    
T  22611410 aaaatgcagatcggttcagcttaatctgcaaaacaagaatcataaacaaatttggaaagtcctaaaatgtcggaacatttataagat-cgttccaaacaa 22611508  T
Q  123 taataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatat 222  Q
    || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22611509 tattaaatatttcctaaaatataaaatacactttagaaatattccatagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatat 22611608  T
Q  223 tgtttccttaaacaataaagggcg 246  Q
    ||||||||||||||||||||||||    
T  22611609 tgtttccttaaacaataaagggcg 22611632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 12911013 - 12911233
Alignment:
Q  25 aatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaata 124  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  12911013 aatgcagatcggttcagcttaatctgcaaaacaaaaatcagaaacaaatctggaaagtcctaaaatgtcggaacatttataggat-cgttccaaacaata 12911111  T
Q  125 ataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattg 224  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||     
T  12911112 ataaatatttcctaaaatataagatacactttagaaatatttcacagctgattcttagatgatacgcgcgttgcttgatcaataagttaaggaaatatta 12911211  T
Q  225 tttccttaaacaataaagggcg 246  Q
    ||||||||||||||||||||||    
T  12911212 tttccttaaacaataaagggcg 12911233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 23759145 - 23759365
Alignment:
Q  25 aatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaata 124  Q
    ||||||||||  ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||| ||||||||||||||    
T  23759145 aatgcagatcgtttcagcttaatctacaaaacaagaatcagaaacaaatctagaaagtcctaaaatgttggaacatttataggat-cgttccaaacaata 23759243  T
Q  125 ataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattg 224  Q
     ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  23759244 ttaaatatttcctaaaatataaaatacactttagaaatattctacaactgattcttatatgatatgcacgttgcttgatcaataagttaaggaaatattg 23759343  T
Q  225 tttccttaaacaataaagggcg 246  Q
    ||||||||||||||||||||||    
T  23759344 tttccttaaacaataaagggcg 23759365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 24789785 - 24789577
Alignment:
Q  37 ttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcc 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||| |||||    
T  24789785 ttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcggaacatttataggat-cgttccaaacaatattaaatttttcc 24789687  T
Q  137 taaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaaca 236  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||| || ||||||||| ||||||| ||||||||||||  ||||||||||||    
T  24789686 taaaatataaaatacactttagtaatattccacagctgattcttagatgataagcacgttgcttggtcaataaattaaggaaatatattttccttaaaca 24789587  T
Q  237 ataaagggcg 246  Q
    ||||||||||    
T  24789586 ataaagggcg 24789577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 15329001 - 15329050
Alignment:
Q  185 gatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaa 234  Q
    ||||||||||||||||  |||||||| |||||||||||||||||||||||    
T  15329001 gatatgcgcgttgcttagtcaataagataaggaaatattgtttccttaaa 15329050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 246
Target Start/End: Original strand, 21531071 - 21531119
Alignment:
Q  198 cttgatcaataagttaaggaaatattgtttccttaaacaataaagggcg 246  Q
    |||| |||||||| ||||||||||| ||||||||||| |||||| ||||    
T  21531071 cttggtcaataagataaggaaatatggtttccttaaataataaaaggcg 21531119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 18 - 244
Target Start/End: Original strand, 159585 - 159810
Alignment:
Q  18 tcagtaaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttcca 117  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||||||    
T  159585 tcagtaaaatgcagatcggttcggcttaatctgcaaaacaagaatcagaaacaaatctggaaagacctaaaatgtcagaacatttataggat-cgttcca 159683  T
Q  118 aacaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaagga 217  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  159684 aacaatattaaatatttcctaaaatataaaatacactttagaaatattccacagttgattcttagatgatatgcgcgttgcttgatcaataagttaagga 159783  T
Q  218 aatattgtttccttaaacaataaaggg 244  Q
    |||||||||||||||||||||||||||    
T  159784 aatattgtttccttaaacaataaaggg 159810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 18 - 244
Target Start/End: Original strand, 17855709 - 17855934
Alignment:
Q  18 tcagtaaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttcca 117  Q
    |||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||     
T  17855709 tcagtaaaattcagatcggttcagcttaatctgcaaaacaagaagcagaaacaaatctggaaagtcctaaaatgtcggaacatttataggat-cgttccg 17855807  T
Q  118 aacaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaagga 217  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  17855808 aacaataataaatatttcctaaaatataaaatacactttcgaaatattccacagctgattcttagaagatatgcgcattgcttgatcaataagttaagaa 17855907  T
Q  218 aatattgtttccttaaacaataaaggg 244  Q
    |||||||||||||||||||||||||||    
T  17855908 aatattgtttccttaaacaataaaggg 17855934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 23 - 244
Target Start/End: Original strand, 23879404 - 23879624
Alignment:
Q  23 aaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaa 122  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  23879404 aaaatgcagatcggttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcggaacatttataggat-cgttccaaacaa 23879502  T
Q  123 taataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatat 222  Q
    || ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  23879503 tattaaatatttcccaaaatataaaatacactttagaaatattccacaactgattcttagatgatatgcgtgttgcttgatcaataagttaaggaaatat 23879602  T
Q  223 tgtttccttaaacaataaaggg 244  Q
    ||||||||||||||||||||||    
T  23879603 tgtttccttaaacaataaaggg 23879624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 18 - 244
Target Start/End: Original strand, 33666306 - 33666530
Alignment:
Q  18 tcagtaaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttcca 117  Q
    |||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||    
T  33666306 tcagcaaaatgcagatcggttcagcttaatctgcaaaacaataatcagaaacaaatctggaaagtcctaaaatgtcggaacatt-ataggat-cgttcca 33666403  T
Q  118 aacaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaagga 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||| ||||||    
T  33666404 aacaataataaatatttcctaaaatataaaatacactttagaaatattccacaactgattcttagaagttatgcgcgttacttgatcaataagataagga 33666503  T
Q  218 aatattgtttccttaaacaataaaggg 244  Q
    |||||||||||||||||||||||||||    
T  33666504 aatattgtttccttaaacaataaaggg 33666530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 9281355 - 9281128
Alignment:
Q  18 tcagtaaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttcca 117  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| |    
T  9281355 tcagtaaaatgcagatcggttcagcttaatctgtaaaacaagaatcagaaacaaatctggaaagttctaaaatgtcggaacatttataggat-cgttcta 9281257  T
Q  118 aacaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaagga 217  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||    
T  9281256 aacaataataaatatttcctaaaacataaaatacactttagaaatatttcacagctgattctttgatgatatgcgcgttgcttgatcaataagttaagga 9281157  T
Q  218 aatattgtttccttaaacaataaagggcg 246  Q
    |||||||||| |||||||||| |||||||    
T  9281156 aatattgttttcttaaacaatgaagggcg 9281128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 28 - 246
Target Start/End: Original strand, 17235119 - 17235335
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||    
T  17235119 gcagatcggttcagct-aatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcggaacatttataggat-cattccaaacaataata 17235216  T
Q  128 aatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgttt 227  Q
    ||||||||||||||||||| ||  | ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17235217 aatatttcctaaaatataatatctaatttagaaatattccacatctgattcttagaagatatgcgtgttgcttgatcaataagttaaggaaatattgttt 17235316  T
Q  228 ccttaaacaataaagggcg 246  Q
    ||||||||||||| |||||    
T  17235317 ccttaaacaataacgggcg 17235335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 17527522 - 17527302
Alignment:
Q  25 aatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaata 124  Q
    |||||| ||| ||| |||||||||||| |||||||||||||||| |||||| |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  17527522 aatgcatatcggtttagcttaatctgctaaacaagaatcagaaagaaatctagaaagtcctaaaatgtcggaacatttataggat-cgttccaaacaata 17527424  T
Q  125 ataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattg 224  Q
     |||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17527423 ttaaatatttcttaaaatataaaatacactttagaaatatttcacagttgattcttagatgatatgcgcgttgcttgatcaataagttaaggaaatattg 17527324  T
Q  225 tttccttaaacaataaagggcg 246  Q
    ||| ||||||||||||||||||    
T  17527323 tttacttaaacaataaagggcg 17527302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 28 - 244
Target Start/End: Original strand, 19100422 - 19100636
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||    
T  19100422 gcagatcggttcagct-aatctgcaaaacaagaatcataaacaaatctggaaagtcctaaaatgtcggaacatttataggat-cgttccaaccaataata 19100519  T
Q  128 aatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgttt 227  Q
    ||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||    
T  19100520 aatatttcctaaaatataaaatctactttggaaatattccacagctgattcttagaagatatgtgtgttgcttgatcaataagataaggaaatattgttt 19100619  T
Q  228 ccttaaacaataaaggg 244  Q
    |||||||||||||||||    
T  19100620 ccttaaacaataaaggg 19100636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 28 - 246
Target Start/End: Original strand, 19077668 - 19077884
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||| || |||||||| ||||||||    
T  19077668 gcagatcggttcagct-aatctgcaaaacaagaatcagaaacaaatagggaaagtcctaaaatgtcggaacatttatagtat-cgttccaaccaataata 19077765  T
Q  128 aatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgttt 227  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  19077766 aatatttcctaaaatataaaatctactttagaaatattccacagctgattcttagaagatatgcgtgttgcttgatcaataatataaggaaatattgttt 19077865  T
Q  228 ccttaaacaataaagggcg 246  Q
    ||||||||||| |||||||    
T  19077866 ccttaaacaatgaagggcg 19077884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 18 - 243
Target Start/End: Complemental strand, 19894315 - 19894089
Alignment:
Q  18 tcagtaaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttcca 117  Q
    |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || ||||||| |||||| |    
T  19894315 tcagtaaaatgcagttcggttcagcttaatctgcaaaacaataatcagaaacaaatctggaaagtcctaaaatgtcggaaaatgtatagga-tcgttcaa 19894217  T
Q  118 aacaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattct--tagaagatatgcgcgttgcttgatcaataagttaag 215  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||||||||||||| ||  ||||  ||||||||||||||||||||||||||||||||||||    
T  19894216 aacaataataaatattttctataatgtaaaatacactttagaaatattccacaactctttcttatagaagatatgcgcgttgcttgatcaataagttaag 19894117  T
Q  216 gaaatattgtttccttaaacaataaagg 243  Q
    |||||||||||||||||| |||||||||    
T  19894116 gaaatattgtttccttaagcaataaagg 19894089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 44 - 244
Target Start/End: Complemental strand, 13870021 - 13869822
Alignment:
Q  44 taatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaata 143  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||    
T  13870021 taatctgcaaaacaagaatcagaaacaaatcttgaaagtcctaaaatgtcggaacatttataggat-cgttctaaacaataataaatatttcctaaaata 13869923  T
Q  144 taaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagg 243  Q
    ||| ||  ||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  13869922 taatatctactttagaaatattccacaactaattcttagaagatatgcgtgttgcttgatcaataagataaggaaatattgtgtccttaaacaataaagg 13869823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 44 - 246
Target Start/End: Original strand, 13195864 - 13196065
Alignment:
Q  44 taatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaata 143  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||||||||    
T  13195864 taatctgcaaaacaagaatcagaaacaaatctgaaaagtcctaaaatgtcggcatatttataggat-cgttccaaacaataataaatatttcctaaaata 13195962  T
Q  144 taaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagg 243  Q
    ||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||  |||||||||||||||||||||||||||    
T  13195963 taatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatccattagataaacaaatattgtttccttaaacaataaagg 13196062  T
Q  244 gcg 246  Q
    |||    
T  13196063 gcg 13196065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 28 - 242
Target Start/End: Complemental strand, 20465528 - 20465316
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    |||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| | |||||| |||||||| |||||| |    
T  20465528 gcagatcagttcagct-aatctgcaaaacaagaatcataaacaaatatggaaagtcctaaaatgtcggaacatctttaggat-cgttccaaccaataaca 20465431  T
Q  128 aatatttcctaaaatataaaatac-actttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtt 226  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||   |||||||| |||||||||| |||||||| |||||||||||||||    
T  20465430 aatatttcctaaaatataaa-tactactttagaaatattccacagctgattctgtaaagatatgtgcgttgcttggtcaataagataaggaaatattgtt 20465332  T
Q  227 tccttaaacaataaag 242  Q
    ||||||||||||||||    
T  20465331 tccttaaacaataaag 20465316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 44 - 246
Target Start/End: Complemental strand, 21706149 - 21705948
Alignment:
Q  44 taatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaata 143  Q
    |||||| ||||||| |||||||| || |||||||||||||||||||||||| |||||||||||||| | ||||||| |||||||||||||||||||||||    
T  21706149 taatctacaaaacatgaatcagagactaatctggaaagtcctaaaatgtcggaacatttataggat-cattccaaataataataaatatttcctaaaata 21706051  T
Q  144 taaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagg 243  Q
    ||| ||  ||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||| |||||||||||||||| |||||||||||||||    
T  21706050 taatatctactttagaaatattccacaactgattcttagatgatatacgcgttgcttggtcaataagataaggaaatattgtttacttaaacaataaagg 21705951  T
Q  244 gcg 246  Q
    |||    
T  21705950 gcg 21705948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 44 - 246
Target Start/End: Original strand, 19171956 - 19172156
Alignment:
Q  44 taatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaata 143  Q
    |||||| ||||||| |||||||||| ||| || |||||||||||||  ||| |||||||||||||| |||||||| ||||||||||||||||||||||||    
T  19171956 taatctacaaaacatgaatcagaaaaaaa-ctcgaaagtcctaaaaattcggaacatttataggat-cgttccaaccaataataaatatttcctaaaata 19172053  T
Q  144 taaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagg 243  Q
    ||||||  ||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||    
T  19172054 taaaatctactttagaaatgttccgcagctgattcttagaagatatgcgcgttacttgatcaataagataaggaaataatgtttccttaaacaataaagg 19172153  T
Q  244 gcg 246  Q
    |||    
T  19172154 gcg 19172156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 28 - 246
Target Start/End: Original strand, 20653594 - 20653810
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||| | ||||| | |||||| ||| | ||||||||| |    
T  20653594 gcagatcagttcagct-aatatgcaaaacaagaatcagaaacaaatatggaaagtcctaaaatgttggaacatctttaggat-cgtccaaaacaataaca 20653691  T
Q  128 aatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgttt 227  Q
    |||||||| |||||||||||    ||||||||||||||||||||||||||||   |||||||| ||||||||||||||||||| ||||||||||||||||    
T  20653692 aatatttcttaaaatataaatattactttagaaatattccacagctgattctgtaaagatatgtgcgttgcttgatcaataagataaggaaatattgttt 20653791  T
Q  228 ccttaaacaataaagggcg 246  Q
    |||||||||||||||||||    
T  20653792 ccttaaacaataaagggcg 20653810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 28 - 242
Target Start/End: Complemental strand, 20989424 - 20989212
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| |||| | ||||||||||| ||||||| || ||||||||| |||||| ||| |||||||||| ||| |||||||| |||||| |    
T  20989424 gcagatcggttcagct-aatcagaaaaacaagaattagaaacagatatggaaagtcgtaaaatatcggaacatttataagat-cgttccaaccaataaca 20989327  T
Q  128 aatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgttt 227  Q
    ||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  20989326 aatatttcctaaaatataaaatctactttagaaatattccacaactgattcttagaagatatgcgcgttgctagatcaataagaaaaggaaatattgttt 20989227  T
Q  228 ccttaaacaataaag 242  Q
    ||||| |||||||||    
T  20989226 ccttatacaataaag 20989212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 44 - 246
Target Start/End: Complemental strand, 21723026 - 21722825
Alignment:
Q  44 taatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaata 143  Q
    ||||||||| ||||||||||||| || ||||| ||||||||||||| ||| ||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  21723026 taatctgcataacaagaatcagagactaatcttgaaagtcctaaaaagtcaaaacatttataggat-cgttccaaataataataaatatttcctaaaata 21722928  T
Q  144 taaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagg 243  Q
    ||| ||  ||||||||||||||| |||||||||||||||| |||||  ||||||| || |||||||| |||||||| |||||||||||||||||||||||    
T  21722927 taatatctactttagaaatattctacagctgattcttagatgatatatgcgttgcctggtcaataagataaggaaagattgtttccttaaacaataaagg 21722828  T
Q  244 gcg 246  Q
    |||    
T  21722827 gcg 21722825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 20 - 246
Target Start/End: Complemental strand, 12028785 - 12028561
Alignment:
Q  20 agtaaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaa 119  Q
    ||||||| ||||||| |||||||| |||||||||||||  | |||||||||||| || ||||||||||||||||| |||||||||| ||| |||||||      
T  12028785 agtaaaaagcagatcggttcagct-aatctgcaaaacagaattcagaaacaaatatgaaaagtcctaaaatgtcggaacatttataagat-cgttccagc 12028688  T
Q  120 caataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaa 219  Q
    |||||| |||||||| | ||||||||||||  ||||||||||||||||||||||||||||    ||||||||| ||||||||  ||||| | ||||||||    
T  12028687 caataacaaatatttgccaaaatataaaatctactttagaaatattccacagctgattctgtatagatatgcgtgttgcttggacaataggataaggaaa 12028588  T
Q  220 tattgtttccttaaacaataaagggcg 246  Q
    |||||||||||||||||||||||||||    
T  12028587 tattgtttccttaaacaataaagggcg 12028561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 28 - 246
Target Start/End: Complemental strand, 12039342 - 12039128
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    |||||||||||||||| ||| ||||||| |||||||| |||||||| |||||||||||||||||||| ||||| | |||||| ||| | ||||||||| |    
T  12039342 gcagatcagttcagct-aatatgcaaaataagaatcataaacaaatatggaaagtcctaaaatgtcggaacatctttaggat-cgtccaaaacaataaca 12039245  T
Q  128 aatatttcctaaaatataaaatac-actttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtt 226  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||   |||||||| | |||||||| |||||||| |||||||||||||||    
T  12039244 aatatttcctaaaatataaa-tactactttagaaatattccacagctgattctgtaaagatatgtgtgttgcttggtcaataagataaggaaatattgtt 12039146  T
Q  227 tccttaaacaataaagggcg 246  Q
    |||  |||||||||||||||    
T  12039145 tcc--aaacaataaagggcg 12039128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 51 - 246
Target Start/End: Complemental strand, 17864086 - 17863892
Alignment:
Q  51 caaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaatataaaata 150  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||   |||||| ||| | ||||||||| |||||||| ||||||||||||       
T  17864086 caaaacaagaatcagaaacaaatatggaaagtcctaaaatgtcggaacatcattaggat-cgtccaaaacaataacaaatattttctaaaatataaatat 17863988  T
Q  151 cactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagggcg 246  Q
     ||||||||||||||||||| |||| | |   |||||||| |||||| ||| |||||||| |||||||||||||||||||||||||||||||||||    
T  17863987 tactttagaaatattccacaactgagtatgtaaagatatgtgcgttgtttggtcaataagataaggaaatattgtttccttaaacaataaagggcg 17863892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 8465315 - 8465085
Alignment:
Q  18 tcagtaaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttcca 117  Q
    |||||| || ||| ||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  ||||| | |||||| ||||||     
T  8465315 tcagtacaaagcatatcggttcagct-aatctgcaaaacaagaatcagaaacaaatatggaaagtcctaaaatgtcagaacatctttaggat-cgttccc 8465218  T
Q  118 aacaa-taataaatatttcctaaaata-ta-aaatac-actttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagtta 213  Q
    ||||| ||| ||||| ||||||||||| || |||||| ||||||||| |||||||||| ||||||     |||||||||||||||||| |||||||| ||    
T  8465217 aacaaataacaaatagttcctaaaataatataaatactactttagaagtattccacagttgattccgtatagatatgcgcgttgcttggtcaataagata 8465118  T
Q  214 aggaaatattgtttccttaaacaataaagggcg 246  Q
    ||||| |||||||| ||||||||||||||||||    
T  8465117 aggaactattgttttcttaaacaataaagggcg 8465085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 145 - 246
Target Start/End: Original strand, 25970317 - 25970418
Alignment:
Q  145 aaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaaggg 244  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  25970317 aaaatacactttagaaatattccacagctgattcttagaaaatatgcgcgttgcttagtcaataagttaaggaaatattgtttccttaaacaataaaggg 25970416  T
Q  245 cg 246  Q
    ||    
T  25970417 cg 25970418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 145 - 246
Target Start/End: Original strand, 25974757 - 25974858
Alignment:
Q  145 aaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaaggg 244  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  25974757 aaaatacactttagaaatattccacagctgattcttagaaaatatgcgcgttgcttagtcaataagttaaggaaatattgtttccttaaacaataaaggg 25974856  T
Q  245 cg 246  Q
    ||    
T  25974857 cg 25974858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 28 - 238
Target Start/End: Original strand, 25805933 - 25806141
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| ||||||||||||| |||||||| |||||| |||||||||||||| ||||| ||||| | |||||| |||   |||||||| ||    
T  25805933 gcagatcggttcagct-aatctgcaaaacaggaatcagagacaaatatggaaagtcctaaagtgtcggaacatctttaggat-cgtctaaaacaatatta 25806030  T
Q  128 aatatttcctaaaatataaaatacactttagaaatattccacagctgattct-tagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtt 226  Q
    ||||| ||||||||||||||    |||||| ||||||||| ||  ||||||| |||| ||||||||||||||||| |||||||| |||||||||||||||    
T  25806031 aatatctcctaaaatataaatgctactttaaaaatattcctcaattgattctgtaga-gatatgcgcgttgcttggtcaataagataaggaaatattgtt 25806129  T
Q  227 tccttaaacaat 238  Q
    ||||| ||||||    
T  25806130 tccttcaacaat 25806141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 25969864 - 25969984
Alignment:
Q  27 tgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataat 126  Q
    |||||||| |||||||| || ||||||||||||||||| ||| ||||||||||  ||||||| ||||| ||||||||||||| |||||||||||||||||    
T  25969864 tgcagatcggttcagct-aagctgcaaaacaagaatcaaaaataaatctggaagttcctaaagtgtcggaacatttatagga-tcgttccaaacaataat 25969961  T
Q  127 aaatatttcctaaaatataaaat 149  Q
    |||||||| ||||||||||||||    
T  25969962 aaatatttactaaaatataaaat 25969984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 25974304 - 25974424
Alignment:
Q  27 tgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataat 126  Q
    |||||||| |||||||| || ||||||||||||||||| ||| ||||||||||  ||||||| ||||| ||||||||||||| |||||||||||||||||    
T  25974304 tgcagatcggttcagct-aagctgcaaaacaagaatcaaaaataaatctggaagttcctaaagtgtcggaacatttatagga-tcgttccaaacaataat 25974401  T
Q  127 aaatatttcctaaaatataaaat 149  Q
    |||||||| ||||||||||||||    
T  25974402 aaatatttactaaaatataaaat 25974424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 239
Target Start/End: Complemental strand, 23882317 - 23882123
Alignment:
Q  44 taatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaata 143  Q
    ||||||||| ||||||||||||| | |||| |||||||||||||||||| | ||||| | |||||  ||| | |||||     |||||||||||||||||    
T  23882317 taatctgcataacaagaatcagagaaaaatttggaaagtcctaaaatgtaggaacatctttaggaa-cgtccaaaacagcttcaaatatttcctaaaata 23882219  T
Q  144 taaaataca-ctttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaata 239  Q
    |||   ||| |||||| ||||||||||| ||||||||   ||||||||||||||||||| |||||||| ||||||||||| ||||||||||| ||||    
T  23882218 taatc-acatctttaggaatattccacaactgattctataaagatatgcgcgttgcttggtcaataagataaggaaatatggtttccttaaataata 23882123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 179
Target Start/End: Complemental strand, 17876388 - 17876239
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||| ||||| | ||||| |||  | ||| ||||| |    
T  17876388 gcagatcggttcagct-aatctgcaaaacaagaatcaaaaacaaatatcgaaagtcctaaaatgtcggaacatctttagga-tcgaacaaaaaaataaca 17876291  T
Q  128 aatatttcctaaaatataaaatacactttagaaatattccacagctgattct 179  Q
    || |||||||||||||||||    ||||||||||||||||||| || |||||    
T  17876290 aacatttcctaaaatataaatattactttagaaatattccacaactaattct 17876239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 239
Target Start/End: Complemental strand, 29253299 - 29253107
Alignment:
Q  46 atctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaatata 145  Q
    |||||||||||| |||||||| |||||| |||||||||||||||||| | |||||   |||||  |||   |||||     |||||||||||||||||||    
T  29253299 atctgcaaaacaggaatcagagacaaatatggaaagtcctaaaatgtaggaacatcgttaggaa-cgtctaaaacagcttcaaatatttcctaaaatata 29253201  T
Q  146 aaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaata 239  Q
    |     ||||||| ||||||||||| |||||  |   ||||||||||||||||||| |||||||| |||| |||||  ||||||||||| ||||    
T  29253200 atcactactttaggaatattccacaactgatcatgtaaagatatgcgcgttgcttggtcaataagataagaaaatacggtttccttaaataata 29253107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 28623213 - 28623142
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacat 100  Q
    ||||||| |||||||| |||||||||||||  ||||| |||||||  |||||||||||||||||||| |||||    
T  28623213 gcagatcggttcagct-aatctgcaaaacagaaatcataaacaaagatggaaagtcctaaaatgtcggaacat 28623142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 15930329 - 15930278
Alignment:
Q  183 aagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaa 234  Q
    |||||||| |||||||||| |||||||| ||||||||||| |||||||||||    
T  15930329 aagatatgtgcgttgcttggtcaataagataaggaaatatggtttccttaaa 15930278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 24542333 - 24542388
Alignment:
Q  184 agatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaata 239  Q
    ||||||||| |||| ||| |||||||| ||||||||||| ||||||||||| ||||    
T  24542333 agatatgcgtgttggttggtcaataagataaggaaatatggtttccttaaataata 24542388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 15930465 - 15930419
Alignment:
Q  46 atctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgt 92  Q
    |||||||||||| |||||||| |||||| | ||||||||||||||||    
T  15930465 atctgcaaaacacgaatcagagacaaatatagaaagtcctaaaatgt 15930419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 11521050 - 11520830
Alignment:
Q  25 aatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaata 124  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11521050 aatgcagatcggttcagcttgatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggat-cgttccaaacaata 11520952  T
Q  125 ataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattg 224  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11520951 ataaatatttcctaaaatataaaacacaatttagaaatattccacaaccgattcttagaagatatgggcgttgcttgatcaataagttaaggaaatattg 11520852  T
Q  225 tttccttaaacaataaagggcg 246  Q
    ||||||||||||||||||||||    
T  11520851 tttccttaaacaataaagggcg 11520830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 25 - 242
Target Start/End: Original strand, 645657 - 645870
Alignment:
Q  25 aatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaata 124  Q
    |||||||| | |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| || |||||||||||||||    
T  645657 aatgcagaccggttcagcttaatttgcaaaacaagaatcagaaataaatctggaaagtcctaaaatgtcggaacatttatatga-tcgttccaaacaata 645755  T
Q  125 ataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattg 224  Q
     |  ||||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  645756 ttcgatatttcctaaaatataaaatacactttagaaatattcca---ctgattcttagatgatatgcgcgtagcttgatcaataagttaagaaaatattg 645852  T
Q  225 tttccttaaacaataaag 242  Q
    ||||||||||||||||||    
T  645853 tttccttaaacaataaag 645870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 25 - 229
Target Start/End: Original strand, 14165687 - 14165889
Alignment:
Q  25 aatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaata 124  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||||  |||||||||||| |    
T  14165687 aatgcagatcggttcagct-aatctgcaaaacaagaatcagaaacaatgctggaaagtcctaaaatgtcggaaaatttataggag-cgttccaaacaaaa 14165784  T
Q  125 ataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattg 224  Q
    |||||||||||||||||||||| ||  |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  14165785 ataaatatttcctaaaatataatatctactttagaaatattccaccgctgattcttagatgatatgcgtgttgcttgatcaataagttaaggaaatattg 14165884  T
Q  225 tttcc 229  Q
    |||||    
T  14165885 tttcc 14165889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 44 - 244
Target Start/End: Complemental strand, 16207500 - 16207301
Alignment:
Q  44 taatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaata 143  Q
    ||||||||||||||||||| |||||||||| ||||||||||||| || ||| |||||||||||||| |||||||| |||||| |||||||||||||||||    
T  16207500 taatctgcaaaacaagaattagaaacaaatatggaaagtcctaacatatcggaacatttataggat-cgttccaaccaataaaaaatatttcctaaaata 16207402  T
Q  144 taaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagg 243  Q
    ||||||| ||||||||||||||| ||| |||||||||  |||||||| | ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  16207401 taaaatatactttagaaatattcgacaactgattcttcaaagatatgtgtgttgcttgatcaacaagataaggaaatattgtttccttaaacaataaagg 16207302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 28 - 246
Target Start/End: Original strand, 4459264 - 4459480
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| |||||||||||||  |||||||||||| | |||||| |||||||||||||||||||||||||||| |||||||| |||||| |    
T  4459264 gcagatcggttcagct-aatctgcaaaacagaaatcagaaacaattatggaaaatcctaaaatgtcgaaacatttataggat-cgttccaaccaataaca 4459361  T
Q  128 aatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgttt 227  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||||||||||    |||||| |||||||||||  ||||||||||||||||||||||||    
T  4459362 aatatttccaaaaatataaaatctactttagaaatattccacagctgattctggatagatattcgcgttgcttggacaataagttaaggaaatattgttt 4459461  T
Q  228 ccttaaacaataaagggcg 246  Q
    || ||||||||||||||||    
T  4459462 ccataaacaataaagggcg 4459480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 44 - 242
Target Start/End: Original strand, 15438617 - 15438813
Alignment:
Q  44 taatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaata 143  Q
    |||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| ||||| || |||||| |||||||||||||||||    
T  15438617 taatctgcaaaacaagaatcagaaacaaatatggaaactcttaaaatgtcgaaacatttataggat-cgttc-aaccaataacaaatatttcctaaaata 15438714  T
Q  144 taaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaag 242  Q
    ||||||| ||||||||||||||||| || ||||||||  ||||||||||| ||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  15438715 taaaatatactttagaaatattccaaagttgattcttcaaagatatgcgcattgcttggtcaataagataagaaaatattgtttccttaaacaataaag 15438813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 28 - 246
Target Start/End: Complemental strand, 29545775 - 29545559
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| |||||||||||||  |||||||||||||| |||||||||||||||||||| ||||| | |||||| ||| | ||||||||| |    
T  29545775 gcagatcggttcagct-aatctgcaaaacagaaatcagaaacaaatatggaaagtcctaaaatgtcggaacatctttaggat-cgtccaaaacaataaca 29545678  T
Q  128 aatatttcctaaaatataaaatac-actttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtt 226  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||| ||||||||   ||||||||| |||||||||||||||||| || ||||||||||||    
T  29545677 aatatttcctaaaatataaa-tactactttaggaatattccacaactgattctgtaaagatatgcacgttgcttgatcaataagatacggaaatattgtt 29545579  T
Q  227 tccttaaacaataaagggcg 246  Q
    ||||||||||||||||||||    
T  29545578 tccttaaacaataaagggcg 29545559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 28 - 242
Target Start/End: Original strand, 20992068 - 20992280
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| | |||||| |||||||  |||||| |    
T  20992068 gcagatcggttcagct-aatctgcaaaacaagaatcataaacaaatatggaaagtcctaaaatgtcggaacatctttaggat-cgttccacccaataaca 20992165  T
Q  128 aatatttcctaaaatataaaatac-actttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtt 226  Q
    |||||||||||||||||||| ||| ||||||||||||||| |||| ||||| |    |||||||||||||||||| |||||||| |||||||||||||||    
T  20992166 aatatttcctaaaatataaa-tactactttagaaatattcaacagttgattttgtatagatatgcgcgttgcttggtcaataagataaggaaatattgtt 20992264  T
Q  227 tccttaaacaataaag 242  Q
    ||||||||||||||||    
T  20992265 tccttaaacaataaag 20992280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 28 - 242
Target Start/End: Original strand, 12326336 - 12326549
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| ||||| |||||||||||| |||||||||| |||||||||||||||||||| ||||| | ||||||   ||||||  ||||| |    
T  12326336 gcagatcggttcagct-aatcttcaaaacaagaattagaaacaaatatggaaagtcctaaaatgtcggaacatctttaggatcgtttccaacaaataaca 12326434  T
Q  128 aatatttcctaaaatataaaatac-actttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtt 226  Q
    ||||||| ||||||||| |||||| |||||||||||||||||||||| ||||     ||||||||||||| |||| |||||||| |||||||||||||||    
T  12326435 aatattttctaaaatat-aaatactactttagaaatattccacagctaattcggtatagatatgcgcgtttcttggtcaataagataaggaaatattgtt 12326533  T
Q  227 tccttaaacaataaag 242  Q
    ||||||||||||||||    
T  12326534 tccttaaacaataaag 12326549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 11588989 - 11589105
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||    
T  11588989 gcagatcggttcagcttaatctgcaaaacaagaattagaaacaaatctggaaagtcctaaaatgtcggaacatttatagga-tcgttccaaacaatatta 11589087  T
Q  128 aatatttcctaaaatata 145  Q
    ||||||| ||||||||||    
T  11589088 aatatttgctaaaatata 11589105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 110 - 242
Target Start/End: Original strand, 15506835 - 15506967
Alignment:
Q  110 tcgttccaaacaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataa 209  Q
    ||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||| || |||| |||||||    
T  15506835 tcgttccaaccaataacaaatatttcctaaaatataaaatatactttagaaatattccacaactgattcttcaaagatatgcgcatttcttggtcaataa 15506934  T
Q  210 gttaaggaaatattgtttccttaaacaataaag 242  Q
    | |||| ||||||||||||||||||||||||||    
T  15506935 gataagaaaatattgtttccttaaacaataaag 15506967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 149
Target Start/End: Original strand, 11999421 - 11999525
Alignment:
Q  44 taatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaata 143  Q
    |||||||||||||||||||  ||||||||  || ||||||||||||||||  ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  11999421 taatctgcaaaacaagaatatgaaacaaaaatgaaaagtcctaaaatgtcagaacatttatagga-tcgttccaaccaataataaatatttcctaaaata 11999519  T
Q  144 taaaat 149  Q
    ||||||    
T  11999520 taaaat 11999525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 244
Target Start/End: Complemental strand, 16222115 - 16221993
Alignment:
Q  122 ataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaata 221  Q
    |||| ||||||||||||||||||||||   ||||||||||| || |||| |||||||||  |||||||| |||||||| | |||| ||| ||||||||||    
T  16222115 ataacaaatatttcctaaaatataaaacctactttagaaatttttcacaactgattcttcaaagatatgtgcgttgctaggtcaacaagataaggaaata 16222016  T
Q  222 ttgtttccttaaacaataaaggg 244  Q
    |||||||||||||||| ||||||    
T  16222015 ttgtttccttaaacaagaaaggg 16221993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 243
Target Start/End: Original strand, 16437317 - 16437513
Alignment:
Q  46 atctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaatata 145  Q
    |||| ||||||| |||||| | |||||| |||||||||||||||| | | ||||| | |||||  ||| | ||||||    |||||||||||||||||||    
T  16437317 atctacaaaacaggaatcaaagacaaatatggaaagtcctaaaatataggaacatctttaggaa-cgtccaaaacaacttcaaatatttcctaaaatata 16437415  T
Q  146 aaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagg 243  Q
    |     ||||||| ||||||||||| ||||| ||   |||||||| ||||||||||||||||||| |||||| |||| ||||||||||| ||||||||    
T  16437416 atcacaactttaggaatattccacaactgatcctgcaaagatatgtgcgttgcttgatcaataagataaggacatatggtttccttaaataataaagg 16437513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 246
Target Start/End: Original strand, 14927190 - 14927386
Alignment:
Q  46 atctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaatata 145  Q
    |||||||||||| |||||||| |||||| |||||||||||||||||| | ||||| | |||||  ||| | | |||     ||||||||||| ||||||     
T  14927190 atctgcaaaacaggaatcagagacaaatatggaaagtcctaaaatgtaggaacatctttagga-gcgtccaatacagcttcaaatatttcct-aaatat- 14927286  T
Q  146 aaataca-ctttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaaggg 244  Q
    ||  ||| |||||| ||||||||||| ||||||||   |||||||||| |||||||| |||  ||| |||| |||||| ||||||||||| |||||| ||    
T  14927287 aatcacatctttaggaatattccacaactgattctgtaaagatatgcgtgttgcttggtca--aagataagaaaatatggtttccttaaataataaaagg 14927384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 246
Target Start/End: Original strand, 15350656 - 15350852
Alignment:
Q  46 atctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaatata 145  Q
    |||||||||||| |||||||| |||||| |||||||||||||||||| | ||||| | |||||  ||| | | |||     ||||||||||| ||||||     
T  15350656 atctgcaaaacaggaatcagagacaaatatggaaagtcctaaaatgtaggaacatctttagga-gcgtccaatacagcttcaaatatttcct-aaatat- 15350752  T
Q  146 aaataca-ctttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaaggg 244  Q
    ||  ||| |||||| ||||||||||| ||||||||   |||||||||| |||||||| |||  ||| |||| |||||| ||||||||||| |||||| ||    
T  15350753 aatcacatctttaggaatattccacaactgattctgtaaagatatgcgtgttgcttggtca--aagataagaaaatatggtttccttaaataataaaagg 15350850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 25323 - 25096
Alignment:
Q  18 tcagtaaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttcca 117  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  25323 tcagtaaaatgcagatcggttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcggaacatttataggat-cgttcca 25225  T
Q  118 aacaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaagga 217  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||| |    
T  25224 aacaatattaaatatttcctaaaatataaaatacactttagaaatattcaacagctgattcttagatgatatgtgcgatgcttgatcaataagttaagca 25125  T
Q  218 aatattgtttccttaaacaataaagggcg 246  Q
    ||||||||||||||||| |||||||||||    
T  25124 aatattgtttccttaaataataaagggcg 25096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 13165908 - 13166135
Alignment:
Q  18 tcagtaaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttcca 117  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||| || ||||||||||| |||||||    
T  13165908 tcagtaaaatgcagatcggttcagcttaatctgcaaaacaagaattagaaacaaatctggaaagtcctaaagagtcggaagatttataggat-cgttcca 13166006  T
Q  118 aacaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaagga 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  13166007 aacaataataaatatttcctaaaatataaaatacactttagaaatattccacaactgattcttagatgatatgtgcgttgcttgatcaataagttaagga 13166106  T
Q  218 aatattgtttccttaaacaataaagggcg 246  Q
    |||||||||||||||||||||||||||||    
T  13166107 aatattgtttccttaaacaataaagggcg 13166135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 25 - 242
Target Start/End: Complemental strand, 26972034 - 26971818
Alignment:
Q  25 aatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaata 124  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||||||||  |||||||||||||    
T  26972034 aatgcagatcggttcagcttaatctgcaaaacaagaatcataaacaaatatggaaagttctaaaatgtcggaacatttataggatg-gttccaaacaata 26971936  T
Q  125 ataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattg 224  Q
     ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26971935 ttaaatattttctaaaatataaaatacactttagaaatattcaacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattg 26971836  T
Q  225 tttccttaaacaataaag 242  Q
    ||||||||||||||||||    
T  26971835 tttccttaaacaataaag 26971818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 28 - 243
Target Start/End: Original strand, 4246561 - 4246776
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |||||| ||| ||| |||||||| ||||||||    
T  4246561 gcagatcggttcagct-aatctgcaaaacaagaatcagaaacaaatattgaaagtcctaaaatgtcggaacattcataagat-cgttccaaccaataata 4246658  T
Q  128 aatatttcctaaaatataaaatacactttagaaatattccaca--gctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgt 225  Q
    ||||||||||||||||||||||  |||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  4246659 aatatttcctaaaatataaaatctactttagaaatattccacaacgctgattcttagaagatatgcgtgttgcttgatcaataagataaggaaatattgt 4246758  T
Q  226 ttccttaaacaataaagg 243  Q
    ||||||||||||||||||    
T  4246759 ttccttaaacaataaagg 4246776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 20840908 - 20840682
Alignment:
Q  18 tcagtaaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttcca 117  Q
    |||||| || |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||    
T  20840908 tcagtacaaagcagatcagttcagct-aatctacaaaacaagaatcagaaacaaatatggaaagtcctaaaatgtcggaacatttataggat-cgttcca 20840811  T
Q  118 aacaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaagga 217  Q
    | |||||| |||||||||||||||||||||||  ||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||||| ||||||    
T  20840810 accaataacaaatatttcctaaaatataaaatctactttagaaatattccacaactgattttttatagatatgcgcgttgcttgatcaataagataagga 20840711  T
Q  218 aatattgtttccttaaacaataaagggcg 246  Q
    |||||| |||| |||||||||||||||||    
T  20840710 aatattatttcattaaacaataaagggcg 20840682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 28 - 246
Target Start/End: Complemental strand, 20200721 - 20200507
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| |||||||||||||||||||| | |||||| | |||||||||||||| | | |||||||||||||| |||||||| |||||| |    
T  20200721 gcagatcggttcagct-aatctgcaaaacaagaatcatatacaaatttagaaagtcctaaaatattggaacatttataggat-cgttccaaccaataaca 20200624  T
Q  128 aatatttcctaaaatataaaatacactttagaaatattccacagctgattc-ttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtt 226  Q
    |||||||||||||||||||| |  ||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||| | |||||||||||||    
T  20200623 aatatttcctaaaatataaa-tctactttagaaatattccacaactgattccttaga-gatatgcgcgttgcttgatcaataagat-aggaaatattgtt 20200527  T
Q  227 tccttaaacaataaagggcg 246  Q
    ||||||||||||||||||||    
T  20200526 tccttaaacaataaagggcg 20200507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 28 - 244
Target Start/End: Complemental strand, 11667537 - 11667323
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    |||||||||||||||| || ||||||||||||||| |||||||||| |||||| ||||||||||| | ||||| | |||||| ||| | ||||||||| |    
T  11667537 gcagatcagttcagct-aacctgcaaaacaagaattagaaacaaatatggaaaatcctaaaatgttgtaacatctttaggat-cgtccaaaacaataaca 11667440  T
Q  128 aatatttcctaaaatataaaatac-actttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtt 226  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| || |||||   ||||||||||||||||||| |||||||| |||||||||| | ||    
T  11667439 aatatttcctaaaatataaa-tactactttagaaatattccacaacttattctgtaaagatatgcgcgttgcttggtcaataagataaggaaatagtttt 11667341  T
Q  227 tccttaaacaataaaggg 244  Q
    ||||||||||||||||||    
T  11667340 tccttaaacaataaaggg 11667323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 244
Target Start/End: Original strand, 24986498 - 24986722
Alignment:
Q  18 tcagtaaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttcca 117  Q
    |||| |||| ||| ||| |||||||| ||||| |||||||  |||||||||||||| |||||||||||||||||||| ||||| | || || |||||| |    
T  24986498 tcagaaaaaagcaaatcggttcagct-aatctacaaaacagaaatcagaaacaaatatggaaagtcctaaaatgtcggaacatctttatga-tcgttcaa 24986595  T
Q  118 aacaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaagga 217  Q
    ||||| || |||||||||||||||||||||    ||||||||||||||||||| |||||| |     ||||||||||||||||| |||||||| |||| |    
T  24986596 aacaaaaacaaatatttcctaaaatataaatattactttagaaatattccacaactgattttgtatggatatgcgcgttgcttggtcaataagataagaa 24986695  T
Q  218 aatattgtttccttaaacaataaaggg 244  Q
    |||||||||||||||||||||||||||    
T  24986696 aatattgtttccttaaacaataaaggg 24986722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 22891293 - 22891222
Alignment:
Q  172 ctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagg 243  Q
    |||||||||  |||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22891293 ctgattcttcaaagatatgtgtgttgcttggtcaataagttaaggaaatattgtttccttaaacaataaagg 22891222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 246
Target Start/End: Complemental strand, 15803674 - 15803555
Alignment:
Q  127 aaatatttcctaaaatataaaataca-ctttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgt 225  Q
    ||||||||||||||||||||   ||| |||||| ||||||||| | ||||||||   ||||||||||| ||| ||| |||||||| ||||||||||| ||    
T  15803674 aaatatttcctaaaatataatc-acatctttaggaatattccataactgattctgtaaagatatgcgcattgtttggtcaataagataaggaaatatggt 15803576  T
Q  226 ttccttaaacaataaagggcg 246  Q
    ||||||||| |||||| ||||    
T  15803575 ttccttaaataataaaaggcg 15803555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 239
Target Start/End: Complemental strand, 23477546 - 23477360
Alignment:
Q  52 aaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaatataaaatac 151  Q
    |||||| |||||| | |||||| |||||||||||| ||||| ||||||| | |||||  ||| | || |||    ||||||||||||||||||||         
T  23477546 aaaacaggaatcatagacaaatatggaaagtcctacaatgtagaaacatctttaggaa-cgtccaaatcaacttcaaatatttcctaaaatataatcaca 23477448  T
Q  152 actttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaata 239  Q
    ||||||| |||||||||||  |||| ||   ||||||||| ||||||||| |||||||| ||||||||| | ||||||||||| ||||    
T  23477447 actttaggaatattccacaattgatcctgtaaagatatgcacgttgcttggtcaataagataaggaaatgtggtttccttaaataata 23477360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 12753739 - 12753789
Alignment:
Q  184 agatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaa 234  Q
    |||||||||||||||||| |||||||| ||||||||||| |||||||||||    
T  12753739 agatatgcgcgttgcttggtcaataagataaggaaatatggtttccttaaa 12753789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 17850938 - 17850852
Alignment:
Q  153 ctttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaata 239  Q
    |||||| | |||| |||| ||||||||   |||||||| |||||||||| |||||||| ||||||||||| ||||||||||| ||||    
T  17850938 ctttaggagtattacacaactgattctgtaaagatatgggcgttgcttggtcaataagataaggaaatatggtttccttaaataata 17850852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 17850995 - 17850949
Alignment:
Q  44 taatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaat 90  Q
    ||||||||||||||||||||||| | |||  ||||||||||||||||    
T  17850995 taatctgcaaaacaagaatcagagataaaaatggaaagtcctaaaat 17850949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 36 - 246
Target Start/End: Complemental strand, 1995 - 1786
Alignment:
Q  36 gttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttc 135  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  1995 gttcagcttaatctgcaaaacaagaatcagaaacaaatctagaaagtcctaaaatgtcggaacatttataggat-cgttccaaacaataataaatatttc 1897  T
Q  136 ctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaac 235  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1896 caaaaatataaaatacactttataaatattccacagctgattcttagaagatatgcgcgttggttgatcaataagttaaggaaatattgtttccttaaac 1797  T
Q  236 aataaagggcg 246  Q
    |||||||||||    
T  1796 aataaagggcg 1786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 181; Significance: 6e-98; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 22485647 - 22485874
Alignment:
Q  18 tcagtaaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttcca 117  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |    
T  22485647 tcagtaaaatgcagatcgattcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcggaacatttataggat-cgttcta 22485745  T
Q  118 aacaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaagga 217  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||| | |    
T  22485746 aacaatattaaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttaaatgatatgcgtgttgcttgatcaataagttaggaa 22485845  T
Q  218 aatattgtttccttaaacaataaagggcg 246  Q
    |||||||||||||||||||||||||||||    
T  22485846 aatattgtttccttaaacaataaagggcg 22485874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 44 - 246
Target Start/End: Complemental strand, 23541026 - 23540825
Alignment:
Q  44 taatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaata 143  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||  |||||||||||||| |||||||| |||||| |||||||||||||||||    
T  23541026 taatctgcaaaacaagaatcagaaacaaatatggaaagtccaaaaatgtcagaacatttataggat-cgttccaaccaataacaaatatttcctaaaata 23540928  T
Q  144 taaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagg 243  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  23540927 taaaatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttaatcaataagataaggaaatattgtttccttaaacaataaagg 23540828  T
Q  244 gcg 246  Q
    |||    
T  23540827 gcg 23540825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 32 - 246
Target Start/End: Original strand, 45136640 - 45136852
Alignment:
Q  32 atcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaata 131  Q
    |||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||| |||||||| |||||| |||||    
T  45136640 atcagttcagct-aatctgcaaaacaagaatcataaacaaatatggaaagtcctaaaatgtcggaacatttataggat-cgttccaaccaataacaaata 45136737  T
Q  132 tttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttcctt 231  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||| ||||||  |||||||| ||| ||||||||||||||||    
T  45136738 tttcctaaaatataaaatatactttagaaatattccacagctgattcttcaaagatatacgcattgctttgtcaataagataatgaaatattgtttcctt 45136837  T
Q  232 aaacaataaagggcg 246  Q
    |||||||||||||||    
T  45136838 aaacaataaagggcg 45136852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 28 - 242
Target Start/End: Complemental strand, 27925087 - 27924875
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | ||||| ||||||||| |||||| |    
T  27925087 gcagatcggttcagct-aatctgcaaaacaagaatcagaaacaaatatggaaagtcctaaaatgtcggaacatctttagga-tcgttccaaccaataaca 27924990  T
Q  128 aatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgttt 227  Q
    |||||||| |||||||||||||  |||||||||||||||||||| |||||||    |||||||||||||||||  |||||||| ||||||||||||||||    
T  27924989 aatatttcataaaatataaaatctactttagaaatattccacagttgattctgtatagatatgcgcgttgctttgtcaataagataaggaaatattgttt 27924890  T
Q  228 ccttaaacaataaag 242  Q
    |||||||||||||||    
T  27924889 ccttaaacaataaag 27924875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 28 - 246
Target Start/End: Original strand, 33977585 - 33977800
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| ||||||||||||| |||||||| |||||| || ||||||||||||||||| ||||| | |||||| ||| | || |||||| |    
T  33977585 gcagatcggttcagct-aatctgcaaaaca-gaatcagagacaaatatgtaaagtcctaaaatgtcggaacatctctaggat-cgtccaaatcaataaca 33977681  T
Q  128 aatatttcctaaaatataaaatac-actttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtt 226  Q
    ||| |||||||||| ||||| ||| ||||||| ||||||||||| ||||||||   ||||||||||| |||||||||||||||| |||||||||||||||    
T  33977682 aatttttcctaaaaaataaa-tactactttaggaatattccacaactgattctgtaaagatatgcgcattgcttgatcaataagataaggaaatattgtt 33977780  T
Q  227 tccttaaacaataaagggcg 246  Q
    ||||||||||||||||||||    
T  33977781 tccttaaacaataaagggcg 33977800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 22476694 - 22476810
Alignment:
Q  18 tcagtaaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttcca 117  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  22476694 tcagttaaatgcagatcggttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcggaacatttatagga-tcgttcca 22476792  T
Q  118 aacaataataaatatttc 135  Q
    || ||  |||||||||||    
T  22476793 aaaaaatataaatatttc 22476810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 28 - 246
Target Start/End: Original strand, 33962267 - 33962474
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| ||||||||||||| |||||||| |||||| || |||||||||||||||||         |||||| ||| | || |||||| |    
T  33962267 gcagatcggttcagct-aatctgcaaaaca-gaatcagagacaaatatgtaaagtcctaaaatgtcgc--------taggat-cgtccaaatcaataaca 33962355  T
Q  128 aatatttcctaaaatataaaatac-actttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtt 226  Q
    ||| |||||||||| ||||| ||| ||||||| ||||||||||  ||||||||   |||||||||||||||||||||||||||| |||||||||||||||    
T  33962356 aatttttcctaaaaaataaa-tactactttaggaatattccacgactgattctgtaaagatatgcgcgttgcttgatcaataagataaggaaatattgtt 33962454  T
Q  227 tccttaaacaataaagggcg 246  Q
    ||||||||||||||||||||    
T  33962455 tccttaaacaataaagggcg 33962474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 79 - 240
Target Start/End: Original strand, 26536861 - 26537022
Alignment:
Q  79 aagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaatataaaatac-actttagaaatattccacagctgatt 177  Q
    |||||||||||||||| ||||| | ||| || ||| | ||||||||| ||||||||| ||||||||||| ||| ||||||| |||||| |||| ||||||    
T  26536861 aagtcctaaaatgtcggaacatctttagtat-cgtccaaaacaataacaaatatttcataaaatataaa-tactactttaggaatatttcacaactgatt 26536958  T
Q  178 cttagaa-gatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataa 240  Q
     ||  || ||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||    
T  26536959 tttgtaaagatatgcgcgttgcttggtcaataagataaggaaatattgtttccttaaaccataa 26537022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 22476808 - 22476878
Alignment:
Q  176 ttcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagggcg 246  Q
    |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22476808 ttcttagatgatatgcgtgttgcttgatcaataagttagggaaatattgtttccttaaacaataaagggcg 22476878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 18622339 - 18622395
Alignment:
Q  183 aagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaata 239  Q
    |||||||| |||||| ||| |||||||| |||||||||||  |||||||||| ||||    
T  18622339 aagatatgtgcgttgtttggtcaataagataaggaaatatgatttccttaaataata 18622395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 179; Significance: 1e-96; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 25 - 243
Target Start/End: Original strand, 24196046 - 24196263
Alignment:
Q  25 aatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaata 124  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||||||| ||||||||||||||    
T  24196046 aatgtagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatttgaaaagtcctaaaatgtcggaatatttataggat-cgttccaaacaata 24196144  T
Q  125 ataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattg 224  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  24196145 ttaaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagatgatatgcgcgttgcttgatcaataaattaaggaaatattg 24196244  T
Q  225 tttccttaaacaataaagg 243  Q
    |||||||||||||||||||    
T  24196245 tttccttaaacaataaagg 24196263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 17135783 - 17135563
Alignment:
Q  25 aatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaata 124  Q
    |||||||||  ||| |||||||||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  17135783 aatgcagattggtttagcttaatcttcaaaacaagaatcaaaaacaaatctggaaagttctaaaatgtcggaacatttataggat-cgttccaaacaata 17135685  T
Q  125 ataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattg 224  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17135684 ttaaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattg 17135585  T
Q  225 tttccttaaacaataaagggcg 246  Q
    ||||||||||||||||| ||||    
T  17135584 tttccttaaacaataaaaggcg 17135563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 23954196 - 23953976
Alignment:
Q  25 aatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaata 124  Q
    |||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||    
T  23954196 aatggagatcggttcagcttaatctgcaaaacaagaatcaaaaacaaatctggaaagtcctaaaatgtcggaacatttatagtat-cgttccaaacaata 23954098  T
Q  125 ataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattg 224  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||    
T  23954097 ttaaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagatgacatgcgcgttgtttgatcaataagttaaggaaatattg 23953998  T
Q  225 tttccttaaacaataaagggcg 246  Q
    ||||||||||||||||||||||    
T  23953997 tttccttaaacaataaagggcg 23953976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 25 - 244
Target Start/End: Complemental strand, 18483011 - 18482793
Alignment:
Q  25 aatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaata 124  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||  |||||||||||||| |||||||||||| |    
T  18483011 aatgcagatcggttcagcttaatctgcaaaacaagaatcggaaacaaatctgaaaagtcctaaaatgtcagaacatttataggat-cgttccaaacaaga 18482913  T
Q  125 ataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattg 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18482912 ataaatatttcctaaaatataaaatacactttagaaatattccacaattgattcttagaagatatgcgcgttgcttgatcaataagataaggaaatattg 18482813  T
Q  225 tttccttaaacaataaaggg 244  Q
    ||||||||||||||||||||    
T  18482812 tttccttaaacaataaaggg 18482793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 13791191 - 13791418
Alignment:
Q  18 tcagtaaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttcca 117  Q
    |||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  13791191 tcagcaaaatgcagatcggttcagcttaatctgcaaaacaagaattagaaacaaatctggaaagtcctaaaatgtcagaacatttataggatt-gttcca 13791289  T
Q  118 aacaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaagga 217  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| ||||||    
T  13791290 aacaataataaatatttcctaaaatataatatttactttagaaatattccacaactgattcttagaagatatgtgcgttgtttgatcaataagataagga 13791389  T
Q  218 aatattgtttccttaaacaataaagggcg 246  Q
    |||||||||||||||||||||||||||||    
T  13791390 aatattgtttccttaaacaataaagggcg 13791418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 7028709 - 7028489
Alignment:
Q  25 aatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaata 124  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  7028709 aatgcagatcggttcaacttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcggaacatttataggat-cgttccaaacaata 7028611  T
Q  125 ataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattg 224  Q
      |||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||| |||||||||||||    
T  7028610 taaaatatttcctaaaatataaaatacactttagaaatattctacggctgattctcagatgatatgcgcgttgcttgatcaataagataaggaaatattg 7028511  T
Q  225 tttccttaaacaataaagggcg 246  Q
    |||||||||| |||||||||||    
T  7028510 tttccttaaataataaagggcg 7028489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 1918882 - 1918662
Alignment:
Q  25 aatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaata 124  Q
    |||||| || |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||  | ||||||||||||    
T  1918882 aatgcatattagttcaacttaatctgcaaaacaagaatcaaaaacaaatctggaaagtcctaaaatgtcggagcatttataggaccc-ttccaaacaata 1918784  T
Q  125 ataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattg 224  Q
     |||||||||||||||||||||||||||||||| |||||||| ||| |  ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1918783 ttaaatatttcctaaaatataaaatacactttaaaaatattctacaacgaattcttagatgatatgcgcgttgcttgatcaataagttaaggaaatattg 1918684  T
Q  225 tttccttaaacaataaagggcg 246  Q
    ||||||||||||||||||||||    
T  1918683 tttccttaaacaataaagggcg 1918662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 44 - 236
Target Start/End: Original strand, 18548188 - 18548379
Alignment:
Q  44 taatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaata 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||    
T  18548188 taatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcggaacatttacaggat-cgttccaaacaataataaatatttcctaaaata 18548286  T
Q  144 taaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaaca 236  Q
    ||| ||  |||||||||||||||||||| ||||||||| ||||||||  |||||||||||||||||| |||||||||||||| ||||||||||    
T  18548287 taatatctactttagaaatattccacagttgattcttaaaagatatgtccgttgcttgatcaataagataaggaaatattgtgtccttaaaca 18548379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 48 - 246
Target Start/End: Original strand, 19634424 - 19634619
Alignment:
Q  48 ctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaatataaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || | ||||||||||||||||||||||||||||||||||     
T  19634424 ctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcggaacatttatagaat-cattccaaacaataataaatatttcctaaaatataat 19634522  T
Q  148 atacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagggcg 246  Q
    ||  |||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||  ||||||||| |||||    
T  19634523 atctactttagaaatattccacagctgattcttagaagata--cgcgttgcttgatcagtaagttaaggaaatattgtttccgaaaacaataacgggcg 19634619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 64 - 244
Target Start/End: Complemental strand, 15572602 - 15572423
Alignment:
Q  64 agaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaatataaaatacactttagaaata 163  Q
    ||||||||||| | |||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15572602 agaaacaaatcagaaaagtcttaaaatgtcggaacatttataggat-cgttccaaacaataataaatatttcctaaaatataaaatacacttttgaaata 15572504  T
Q  164 ttccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaaggg 244  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  15572503 ttccacagatgattcttagaagatatacgcgttggttgatcaataagataaggaaatattgtttccttaaacaataaaggg 15572423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 44 - 246
Target Start/End: Complemental strand, 13515238 - 13515037
Alignment:
Q  44 taatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaata 143  Q
    ||||||||||||||||||||| |||||||| ||||||| |||||||||||| |||||||||||||| |||||||| |||||| |||||||||||||||||    
T  13515238 taatctgcaaaacaagaatcataaacaaatatggaaaggcctaaaatgtcgtaacatttataggat-cgttccaaccaataacaaatatttcctaaaata 13515140  T
Q  144 taaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagg 243  Q
    ||||||  ||||| ||||||||||||| ||||||||    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13515139 taaaatctacttttgaaatattccacaactgattctgtatagatatgcgcgttgcttgatcaataagataaggaaatattgtttccttaaacaataaagg 13515040  T
Q  244 gcg 246  Q
    |||    
T  13515039 gcg 13515037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 46 - 246
Target Start/End: Original strand, 295983 - 296182
Alignment:
Q  46 atctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaatata 145  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||| ||||| | |||||| ||| | ||||||||| |||||||||||||||||||    
T  295983 atctgcaaaacaagaatcagagacaaatatggaaagtcctaaaatgtcggaacatctttaggat-cgtccaaaacaataacaaatatttcctaaaatata 296081  T
Q  146 aaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagggc 245  Q
    ||    ||||||| ||||||||||  ||||||||   |||||| ||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  296082 aatgcaactttaggaatattccacctctgattctgtaaagatacgcgtgttgcttggtcaataagataaggaaatattgtttccttaaacaataaagggc 296181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 44 - 238
Target Start/End: Complemental strand, 18063826 - 18063633
Alignment:
Q  44 taatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaata 143  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| | ||| |  ||| | |||||||| ||||||||||||||||||    
T  18063826 taatctgcaaaacaagaattagagacaaatatggaaagtcctaaaatgtcgaaacatctttagaaa-cgtccaaaacaatattaaatatttcctaaaata 18063728  T
Q  144 taaaatac-actttagaaatattccacagctgattct-tagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaat 238  Q
    |||| ||| |||||||||||||||| ||||||||||| ||||| ||||||| |||||||| |||||||| |||||||||||||||||||||||||||    
T  18063727 taaa-tactactttagaaatattcctcagctgattctgtagaa-atatgcgtgttgcttggtcaataagataaggaaatattgtttccttaaacaat 18063633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 44453009 - 44453137
Alignment:
Q  30 agatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaa 129  Q
    ||||| |||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||||    
T  44453009 agatcggttcagct-aatctgcaaaacaagaatcagaaacaaaactgaaaagtcctaaaatgtcggaacatttataggatt-gttccaaccaataataaa 44453106  T
Q  130 tatttcctaaaatataaaatacactttagaa 160  Q
    ||||||||||||||||||||  |||||||||    
T  44453107 tatttcctaaaatataaaatctactttagaa 44453137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 233
Target Start/End: Original strand, 28051680 - 28051870
Alignment:
Q  46 atctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaatata 145  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | |||||  ||| | ||||||    |||||||||||||||||||    
T  28051680 atctgcaaaacaagaatcagaaacaaatatggaaagtcctaaaatgtcggaacatctttagga-gcgtccaaaacaacttcaaatatttcctaaaatata 28051778  T
Q  146 ---aaatac-actttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaa 233  Q
       ||  || ||||||| ||||||||||| ||||||||   |||||| |||||||| ||| |||||| | ||||||||||||||||||||||    
T  28051779 tataatcacaactttaggaatattccacaactgattctgtaaagatacgcgcgttgtttggtcaataggataaggaaatattgtttccttaa 28051870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 20627102 - 20627061
Alignment:
Q  205 aataagttaaggaaatattgtttccttaaacaataaagggcg 246  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  20627102 aataagataaggaaatattgtttccttaaacaataaagggcg 20627061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 239
Target Start/End: Complemental strand, 21253534 - 21253422
Alignment:
Q  127 aaatatttcctaaaatataaaataca-ctttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgt 225  Q
    ||||||||||||||||||||   ||| |||||| |||||| |||| ||||||||   |||||||||| |||||||| |||||||| ||||||||||| |     
T  21253534 aaatatttcctaaaatataatc-acatctttaggaatattacacaactgattctgtaaagatatgcgtgttgcttggtcaataagataaggaaatatggg 21253436  T
Q  226 ttccttaaacaata 239  Q
    || |||||| ||||    
T  21253435 tttcttaaataata 21253422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 17042234 - 17042179
Alignment:
Q  184 agatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaata 239  Q
    |||||||| | ||||||| |||||||| ||||||||||| ||||||||||| ||||    
T  17042234 agatatgcacattgcttggtcaataagataaggaaatatggtttccttaaataata 17042179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 178; Significance: 4e-96; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 22404407 - 22404179
Alignment:
Q  18 tcagtaaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacattt-ataggattcgttcc 116  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| ||||||| ||||||    
T  22404407 tcagtaaaatgcagatcggttcagcttaatctgcaaaacaagaatcataaacaaatctataaagtcctaaaatgtcgaaacattttataggat-cgttcc 22404309  T
Q  117 aaacaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaagg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||| |||||    
T  22404308 aaacaataataaatatttcctaaaatataaaatacactttagaaatatttcacagttgattcttagaagatatgcgctttgcttgatcaataagctaagg 22404209  T
Q  217 aaatattgtttccttaaacaataaagggcg 246  Q
    |||||||||||||||||||||||| |||||    
T  22404208 aaatattgtttccttaaacaataacgggcg 22404179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 24190384 - 24190604
Alignment:
Q  25 aatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaata 124  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||    
T  24190384 aatgcagatcggttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcggaacatttataggat-cgttccaaaaaata 24190482  T
Q  125 ataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattg 224  Q
     ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||    
T  24190483 ttaaatatttcctaaaatataaaatacactttagaaatattctacagctgattcttagatgatatgcgcgttacttgatcaatatgataaggaaatattg 24190582  T
Q  225 tttccttaaacaataaagggcg 246  Q
    |||||||||||||||| |||||    
T  24190583 tttccttaaacaataaggggcg 24190604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 18 - 242
Target Start/End: Complemental strand, 22246004 - 22245781
Alignment:
Q  18 tcagtaaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttcca 117  Q
    |||| |||||||||||| ||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| |||||||    
T  22246004 tcagcaaaatgcagatcggttcaacttaatctgcaaaacgagaatcaaaaacaaatctggaaagtcctaaaatgtcggaacatgtataggat-cgttcca 22245906  T
Q  118 aacaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaagga 217  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||    
T  22245905 aacaatattaaatatttcctaaaatataaaatacactttagaaatattccatagttgattcttagatgatatgcgcgttgcttgatcaataagttaagga 22245806  T
Q  218 aatattgtttccttaaacaataaag 242  Q
    |||  |||||||||||| |||||||    
T  22245805 aattatgtttccttaaagaataaag 22245781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 22251686 - 22251459
Alignment:
Q  18 tcagtaaaatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttcca 117  Q
    |||| |||||||||||  ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| ||| ||||| |    
T  22251686 tcagcaaaatgcagataggttcagcttaatctgcaaaacaagaataataaacaaatctggaaagtcctaaaatgtcgcaacatttatacgat-cgttcaa 22251588  T
Q  118 aacaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaagga 217  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||| |||||||||||||    
T  22251587 aacaatattaaatatttcctaaaatataaaatacactttagaaatattccacagctaattcttggatgatatgcgcgttgcttgattaataagttaagga 22251488  T
Q  218 aatattgtttccttaaacaataaagggcg 246  Q
    |||| ||||||||||||| ||||||||||    
T  22251487 aatactgtttccttaaacgataaagggcg 22251459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 28 - 246
Target Start/End: Complemental strand, 23420191 - 23419975
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||   |||||||||||||||||| |||||||||||||| |||||||| ||||||||    
T  23420191 gcagatcggttcagct-aatctgcaaaacaagaatcagaaacaaatactgaaagtcctaaaatgtcggaacatttataggat-cgttccaaccaataata 23420094  T
Q  128 aatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgttt 227  Q
    |||||||||||||||||||||   ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  23420093 aatatttcctaaaatataaaaactactttagaaatattccacaactgattcttagaagatatgcgcattgcttgatcaataagataaggaaatattgttt 23419994  T
Q  228 ccttaaacaataaagggcg 246  Q
    |||||| ||||||||||||    
T  23419993 ccttaaccaataaagggcg 23419975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 28 - 246
Target Start/End: Complemental strand, 9422150 - 9421934
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| |||||||||||||||||||||||||||| || |||||||||||||||| | |||||||||||||| |||||||| ||||||||    
T  9422150 gcagatcggttcagct-aatctgcaaaacaagaatcagaaacaaaactagaaagtcctaaaatgttggaacatttataggat-cgttccaaccaataata 9422053  T
Q  128 aatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgttt 227  Q
    ||||||||||||||||||||||  | |||||||||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||    
T  9422052 aatatttcctaaaatataaaatctaatttagaaatatttcacagctgattcttagaagatatgcgtattgcttgatcaataagataaggaaatattgttt 9421953  T
Q  228 ccttaaacaataaagggcg 246  Q
    ||||||||||||| |||||    
T  9421952 ccttaaacaataaggggcg 9421934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 28 - 244
Target Start/End: Complemental strand, 23757891 - 23757677
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| ||||||| ||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||| |    
T  23757891 gcagatcggttcagct-aatctgccaaacaagaacccgaaacaaatctggaaagtcctaaaatgtcaaaacatttataggat-cgttccaaccaataaca 23757794  T
Q  128 aatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgttt 227  Q
    ||||||||||||||||||||||  |||||||||||||||||||||| |||||   |||||||| | |||||||| ||||||   ||||||||||||||||    
T  23757793 aatatttcctaaaatataaaatctactttagaaatattccacagctaattctccaaagatatgtgtgttgcttggtcaatacaataaggaaatattgttt 23757694  T
Q  228 ccttaaacaataaaggg 244  Q
    |||||||||||||||||    
T  23757693 ccttaaacaataaaggg 23757677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 28 - 244
Target Start/End: Complemental strand, 23823347 - 23823133
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| ||||||| ||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||| |    
T  23823347 gcagatcggttcagct-aatctgccaaacaagaacccgaaacaaatctggaaagtcctaaaatgtcaaaacatttataggat-cgttccaaccaataaca 23823250  T
Q  128 aatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgttt 227  Q
    ||||||||||||||||||||||  |||||||||||||||||||||| |||||   |||||||| | |||||||| ||||||   ||||||||||||||||    
T  23823249 aatatttcctaaaatataaaatctactttagaaatattccacagctaattctccaaagatatgtgtgttgcttggtcaatacaataaggaaatattgttt 23823150  T
Q  228 ccttaaacaataaaggg 244  Q
    |||||||||||||||||    
T  23823149 ccttaaacaataaaggg 23823133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 25 - 176
Target Start/End: Complemental strand, 25105098 - 25104948
Alignment:
Q  25 aatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaata 124  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  25105098 aatgcagatcggttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcggaacatttatagga-tcgttccaaacaata 25105000  T
Q  125 ataaatatttcctaaaatataaaatacactttagaaatattccacagctgat 176  Q
     ||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  25104999 ttaaatatttcctaaaatataaaatacactttagaaatattctagagctgat 25104948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 25 - 176
Target Start/End: Complemental strand, 25164191 - 25164041
Alignment:
Q  25 aatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaata 124  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  25164191 aatgcagatcggttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcggaacatttatagga-tcgttccaaacaata 25164093  T
Q  125 ataaatatttcctaaaatataaaatacactttagaaatattccacagctgat 176  Q
     ||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  25164092 ttaaatatttcctaaaatataaaatacactttagaaatattctagagctgat 25164041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 46 - 245
Target Start/End: Original strand, 38405903 - 38406101
Alignment:
Q  46 atctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaatata 145  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||| | ||||| |||||| ||| | ||||||||| |||||||||||||||||||    
T  38405903 atctgcaaaacaagaatcagagacaaatatggaaagtcctaaaatgtcggatcatttttaggat-cgtccaaaacaataaaaaatatttcctaaaatata 38406001  T
Q  146 aaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagggc 245  Q
    ||    ||||||| ||||||||||| ||||||||   ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  38406002 aacattactttaggaatattccacaactgattctgtaaagatatacgcgttgcttggtcaataagataaggaaatattgtttccttaaacaataaagggc 38406101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 30 - 244
Target Start/End: Original strand, 26037307 - 26037517
Alignment:
Q  30 agatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaa 129  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||| |||||||||||||||||||| ||||| | |||||| ||| | ||||||||| |||    
T  26037307 agatcagttcagct-aatctgcaaaaca-gaatcagaa-caaatatggaaagtcctaaaatgtcggaacatctttaggat-cgtccaaaacaataacaaa 26037402  T
Q  130 tatttcctaaaatataaaatac-actttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttc 228  Q
    |||||||||||||||||| ||| ||||||| ||||||||||| |||||| |   ||||||||||||||||||| |||||| | |||||||||||||||||    
T  26037403 tatttcctaaaatataaa-tactactttaggaatattccacaactgattttgtaaagatatgcgcgttgcttggtcaataggataaggaaatattgtttc 26037501  T
Q  229 cttaaacaataaaggg 244  Q
    ||||||||||||||||    
T  26037502 cttaaacaataaaggg 26037517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 46 - 246
Target Start/End: Complemental strand, 30605309 - 30605109
Alignment:
Q  46 atctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaa-caataataaatatttcctaaaatat 144  Q
    ||||||||||||||||| |||||||||| |||||||||||| ||||||| ||||| | |||||| |||  |||| |||    ||||||||||||||||||    
T  30605309 atctgcaaaacaagaattagaaacaaatatggaaagtcctataatgtcggaacatctttaggat-cgtcacaaaacaacttcaaatatttcctaaaatat 30605211  T
Q  145 aaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaaggg 244  Q
    |||    ||||||| ||||||||||| ||||||||   |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30605210 aaacacaactttaggaatattccacaactgattctgtaaagatatgcgcgttgcttgatcaataagataaggaaatattgtttccttaaacaataaaggg 30605111  T
Q  245 cg 246  Q
    ||    
T  30605110 cg 30605109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 49 - 246
Target Start/End: Complemental strand, 22082305 - 22082109
Alignment:
Q  49 tgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaatataaaa 148  Q
    |||||||||||||||||| |||||| ||||||||| |||||||||  ||||| | |||||| ||| | ||||||||| |||||||||||||||||||||     
T  22082305 tgcaaaacaagaatcagagacaaatatggaaagtcttaaaatgtcagaacatctttaggat-cgtccaaaacaataacaaatatttcctaaaatataaac 22082207  T
Q  149 tacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagggcg 246  Q
       ||||||| ||||||||||| |||||| |   || ||||| ||||| |||| |||||||| || ||||||||||||||||||||||||||||||||    
T  22082206 actactttaggaatattccacaactgattatgtaaatatatgtgcgttccttggtcaataagatagggaaatattgtttccttaaacaataaagggcg 22082109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 26328832 - 26328648
Alignment:
Q  46 atctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaatata 145  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||  ||||| | |||||  ||| | |||||| | ||||||||| ||||||||||    
T  26328832 atctgcaaaacaagaatcagagacaaatatggaaagtcctaaaatgtcagaacatctttagga-gcgtccaaaacaacattaaatattttctaaaatata 26328734  T
Q  146 aaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttcctt 231  Q
    |     ||||||| |||||| |||| ||||||||   |||||||| ||||| |||| |||| ||| ||||||||  ||||||||||    
T  26328733 atcacaactttaggaatattacacaactgattctataaagatatgtgcgttacttggtcaacaagataaggaaaagttgtttcctt 26328648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 234
Target Start/End: Original strand, 18221658 - 18221838
Alignment:
Q  53 aaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaatataaaataca 152  Q
    ||||| |||||| | |||||| |||||||||||||||||| | ||||| | ||||| | || | ||||||    |||||||| |||||||||||     |    
T  18221658 aaacaggaatcatagacaaatatggaaagtcctaaaatgtaggaacatctttaggaat-gtccaaaacaacttcaaatattttctaaaatataatcacaa 18221756  T
Q  153 ctttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaa 234  Q
    |||||| |||||| |||| ||||| ||   |||||||| | ||||||||||||||||| ||||||||||  |||||||||||    
T  18221757 ctttaggaatattacacaactgatcctgtaaagatatgtgtgttgcttgatcaataagataaggaaatacggtttccttaaa 18221838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 36 - 246
Target Start/End: Complemental strand, 109886 - 109677
Alignment:
Q  36 gttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttc 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| |||||||||||| | ||||||||||    
T  109886 gttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgttagaacatttataggat-cgttccaaacaaaattaaatatttc 109788  T
Q  136 ctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaac 235  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  109787 ctaaaatataaaatacactttagaaatattccacaattgattcttagatgatatgcgcgttgcttgatcaataagttaaggaaatcttgtttccttaaac 109688  T
Q  236 aataaagggcg 246  Q
    |||||||||||    
T  109687 aataaagggcg 109677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 164; Significance: 9e-88; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 27 - 246
Target Start/End: Complemental strand, 48028 - 47810
Alignment:
Q  27 tgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataat 126  Q
    |||| ||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |    
T  48028 tgcaaatcggttcagcttaatatgcaaaacaagaatcaaaaacaaatctggaaagtcctaaaatgtcggaacatttataggat-cgttccaaacaatatt 47930  T
Q  127 aaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtt 226  Q
    |||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  47929 aaatatttcctaaaatataaaatacattttagaaatattccttagctgattcttagaagatatgcgcgctgcttgatcaataagttaaggaaatattgtt 47830  T
Q  227 tccttaaacaataaagggcg 246  Q
    | ||||||||| ||||||||    
T  47829 ttcttaaacaacaaagggcg 47810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 47 - 243
Target Start/End: Original strand, 37133 - 37328
Alignment:
Q  47 tctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaatataa 146  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||  |||    
T  37133 tctgcaaaacaagaatcataaacaaatctggacagtcctaaaatgtcggaacatttataggat-cgttccaaacaataataaatatttcctaaaaactaa 37231  T
Q  147 aatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagg 243  Q
     ||    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37232 tatcatttttagaaatattccacagctgattcttagaagatatgcgtgttgcttgatcaataagataaggaaatattgtttccttaaacaataaagg 37328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 110 - 244
Target Start/End: Original strand, 16110 - 16244
Alignment:
Q  110 tcgttccaaacaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16110 tcgttccaaacaataataaatatttcctaaaatataaaatacactttagaaatattccatagctgattcttagaagatatgcgcgttgcttgatcaataa 16209  T
Q  210 gttaaggaaatattgtttccttaaacaataaaggg 244  Q
    |||||||||||||||||||||||||||||||||||    
T  16210 gttaaggaaatattgtttccttaaacaataaaggg 16244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 28 - 245
Target Start/End: Complemental strand, 16960 - 16745
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| ||||||| |||||  |||||||||||||| || ||||||||||||||||| ||||| | |||||| |||||||| |||||| |    
T  16960 gcagatcggttcagct-aatctgcgaaacagaaatcagaaacaaatatgaaaagtcctaaaatgtcggaacatctttaggat-cgttccaaccaataaca 16863  T
Q  128 aatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgttt 227  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||||    |||||||||||||| ||| |||||||||||||||| ||||||||    
T  16862 aatatttcctaaaatataaaatctactttagaaatattccaccgctgattctgtatagatatgcgcgttgtttggtcaataagttaaggaattattgttt 16763  T
Q  228 ccttaaacaataaagggc 245  Q
    ||||||||||||||||||    
T  16762 ccttaaacaataaagggc 16745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 110 - 244
Target Start/End: Complemental strand, 1555 - 1421
Alignment:
Q  110 tcgttccaaacaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataa 209  Q
    |||||| | |||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  1555 tcgttctagacaataataaatatttgctaaaatataaaatacagtttagaaatattctacagctgattcttagatgatatgcgcgttgcttgatcaataa 1456  T
Q  210 gttaaggaaatattgtttccttaaacaataaaggg 244  Q
    |||||||||||||||||||||||||||||||||||    
T  1455 gttaaggaaatattgtttccttaaacaataaaggg 1421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 242
Target Start/End: Complemental strand, 8214 - 8001
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaac-aataat 126  Q
    ||||||| |||||||| |||||||| ||||| ||||| |||||||| |||||||||||||||||||| ||||| | |||||| ||| || ||| |||||     
T  8214 gcagatcggttcagct-aatctgcataacaacaatcataaacaaatatggaaagtcctaaaatgtcggaacatctttaggat-cgtccccaaccaataac 8117  T
Q  127 aaatatttcctaaaatataaaatac-actttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgt 225  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||   |||||||| |||||||||| |||||||| ||||||||||||||    
T  8116 aaatatttcctaaaatataaa-tactactttagaagtattccacagctgattctataaagatatgtgcgttgcttggtcaataagataaggaaatattgt 8018  T
Q  226 ttccttaaacaataaag 242  Q
    |||||||||||||||||    
T  8017 ttccttaaacaataaag 8001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 104; Significance: 6e-52; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 28 - 246
Target Start/End: Complemental strand, 17759 - 17543
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| | |||||||||||||||||| |||||||| || ||||||||||||||| | ||||| | |||||| | |||||| |||||| |    
T  17759 gcagatcggttcagct-attctgcaaaacaagaatcataaacaaatatgaaaagtcctaaaatgttggaacatctttaggat-cattccaaccaataaaa 17662  T
Q  128 aatatttcctaaaatataaaatac-actttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtt 226  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||   ||||||||||||||  ||| | |||||| |||||||||||||||    
T  17661 aatatttcctaaaatataaa-tactactttagaaatattccatagctgattctgtaaagatatgcgcgttagttggttaataagataaggaaatattgtt 17563  T
Q  227 tccttaaacaataaagggcg 246  Q
    ||||||||||||||||||||    
T  17562 tccttaaacaataaagggcg 17543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 28 - 246
Target Start/End: Complemental strand, 27153 - 26937
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    ||||||| |||||||| | |||||||||||||||||| |||||||| || ||||||||||||||| | ||||| | |||||| | |||||| |||||| |    
T  27153 gcagatcggttcagct-attctgcaaaacaagaatcataaacaaatatgaaaagtcctaaaatgttggaacatctttaggat-cattccaaccaataaaa 27056  T
Q  128 aatatttcctaaaatataaaatac-actttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtt 226  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||   ||||||||||||||  ||| | |||||| |||||||||||||||    
T  27055 aatatttcctaaaatataaa-tactactttagaaatattccatagctgattctgtaaagatatgcgcgttagttggttaataagataaggaaatattgtt 26957  T
Q  227 tccttaaacaataaagggcg 246  Q
    ||||||||||||||||||||    
T  26956 tccttaaacaataaagggcg 26937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 44 - 246
Target Start/End: Complemental strand, 7157 - 6956
Alignment:
Q  44 taatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaata 143  Q
    ||||||| |||||||||| ||||||||||| |||||||||||||||||| | ||||| | |||||| |||||||| |||||| |||||||||||||||||    
T  7157 taatctgaaaaacaagaaccagaaacaaatatggaaagtcctaaaatgttggaacatctttaggat-cgttccaaccaataacaaatatttcctaaaata 7059  T
Q  144 taaaatac-actttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaag 242  Q
    |||| ||| ||||||||||||||||| | |||||| |   ||| ||||| ||||||||| ||||||||  ||||||||||| ||||||||||||||||||    
T  7058 taaa-tactactttagaaatattccagaactgattttgtaaagctatgcccgttgcttggtcaataagaaaaggaaatattatttccttaaacaataaag 6960  T
Q  243 ggcg 246  Q
    ||||    
T  6959 ggcg 6956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 28 - 242
Target Start/End: Complemental strand, 16255 - 16043
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataata 127  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||| |||||| ||| | ||||||| ||||| | |||||| |||||||| |||||| |    
T  16255 gcagattagttcagct-aatctgcaaaacaagaatcagaaacaaatatggaaaatcccagaatgtcggaacatctttaggat-cgttccaaccaataaca 16158  T
Q  128 aatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgttt 227  Q
    ||||||| ||||||||||| ||  ||||||||||||||| ||| ||||||||    |||||||||| ||||||| |||||||| ||| ||||||||||||    
T  16157 aatattttctaaaatataatatctactttagaaatattcaacatctgattctgtatagatatgcgcattgcttggtcaataagataatgaaatattgttt 16058  T
Q  228 ccttaaacaataaag 242  Q
    |||||||||||||||    
T  16057 ccttaaacaataaag 16043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 356933 - 356838
Alignment:
Q  25 aatgcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaaca 121  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  356933 aatgcagatcggttcagcttaatcttcaaaacaagaatcagaaacaaatctggaaaatcctaaaatgtcggaacatttatagga-tcgttccaaaca 356838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 119 - 242
Target Start/End: Original strand, 9288 - 9411
Alignment:
Q  119 acaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaa 218  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||| |    ||||||||| ||||||||  ||||||| |||||||    
T  9288 acaataacaaatatttcctaaaatataaaatctactttagaaatattccacagctgattttgtatagatatgcgtgttgcttggacaataagataaggaa 9387  T
Q  219 atattgtttccttaaacaataaag 242  Q
    |||||||| |||||||||||||||    
T  9388 atattgttcccttaaacaataaag 9411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 6432 - 6512
Alignment:
Q  28 gcagatcagttcagcttaatctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggat 109  Q
    ||||||| |||||||| ||||||||||||   | ||| ||||||||||| ||||||||||||||||| |||| |||||||||    
T  6432 gcagatcggttcagct-aatctgcaaaactgaattcataaacaaatctgaaaagtcctaaaatgtcggaacaattataggat 6512  T

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Target: scaffold0003 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 243
Target Start/End: Original strand, 26947 - 27143
Alignment:
Q  46 atctgcaaaacaagaatcagaaacaaatctggaaagtcctaaaatgtcgaaacatttataggattcgttccaaacaataataaatatttcctaaaatata 145  Q
    |||| ||||||| |||||| | |||||| |||||||||||||||| | | ||||| | |||||  ||| | ||||||    |||||||||||||||||||    
T  26947 atctacaaaacaggaatcaaagacaaatatggaaagtcctaaaatataggaacatctttaggaa-cgtccaaaacaacttcaaatatttcctaaaatata 27045  T
Q  146 aaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagg 243  Q
    |     ||||||| ||||||||||| ||||| ||   |||||||| ||||||||||||||||||| |||||| |||| ||||||||||| ||||||||    
T  27046 atcacaactttaggaatattccacaactgatcctgcaaagatatgtgcgttgcttgatcaataagataaggacatatggtttccttaaataataaagg 27143  T

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Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 88425 - 88483
Alignment:
Q  184 agatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaag 242  Q
    ||||||||||||||||||  ||||||| ||||||| ||||||| |||||||||||||||    
T  88425 agatatgcgcgttgcttggacaataagataaggaactattgttcccttaaacaataaag 88483  T

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Target: scaffold0480 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 11732 - 11769
Alignment:
Q  55 acaagaatcagaaacaaatctggaaagtcctaaaatgt 92  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  11732 acaagaatcagcaacaaatatggaaagtcctaaaatgt 11769  T

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