View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11386A_low_351 (Length: 245)
Name: NF11386A_low_351
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11386A_low_351 |
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Alignment Details
Target: chr5 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 16 - 212
Target Start/End: Complemental strand, 32107441 - 32107245
Alignment:
| Q |
16 |
aataaaaggagagggagaatggagtaatgggatgttcatggacattaaatagaatagacaaactacaaagaccttccttcccggccactttcttttccta |
115 |
Q |
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| T |
32107441 |
aataaaaggagagggagaatggagtaatgggatgttaatggacattaaatagaatagacaaactacaaagaccttccttcccggccactttcttttccta |
32107342 |
T |
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| Q |
116 |
tatgtccccaccttacataataatacaagtatcacttcaacatcttcatacatttttataacactttgacattccacatacaaaccaaacctctctc |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32107341 |
tatgtccccaccttacataataatacaagtatcacttcaacatcttcatatatttttataacactttgacattccacatacaaaccaaacctctctc |
32107245 |
T |
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