View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11386A_low_37 (Length: 432)
Name: NF11386A_low_37
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11386A_low_37 |
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Alignment Details
Target: chr7 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 15 - 423
Target Start/End: Complemental strand, 47680932 - 47680517
Alignment:
| Q |
15 |
ataatatgtatcattaagtccaaatataaatgcaataccatatactaccaaatatacatggatgtacaaagtaatagctacattatacactatcgccaaa |
114 |
Q |
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| T |
47680932 |
ataatatgtatcattaattccaaatataaatgcaataccatatactaccaattatacatggatgtacaaagtaatagctacattatacactatcgccaaa |
47680833 |
T |
|
| Q |
115 |
aaatccattattgttgtatagtattgatgatcatcaatgaattgagtcaaaccctaataaacgcaattggtttgtgtctcggtttttcaaacatgatggg |
214 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47680832 |
aaatccattattgttgta--gtattgatgatcatcaatgaattgagtcaaaccctaataaacgcaattggtttgtgtctcggtttttcaaacatgatggg |
47680735 |
T |
|
| Q |
215 |
tggttagggtgtcacaacacaattggtttctgtgtttaaaaattcgaatcctgtcttttccatc---------ctttagggtagccccccatgacttgct |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |
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| T |
47680734 |
tggttagggtgtcacaacacaattggtttctgtgtttaaaaattcgaatcctgtcttttccatccttgcttttctttagggtagccccccatgccttgct |
47680635 |
T |
|
| Q |
306 |
gtcactgcatgtagggccttcattctcttcttcttcacccactctgacatagatcaatcacgcgactctctcattatgcttgcttagtgatcatcttgcg |
405 |
Q |
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||||||||||||||| |||||||||||| || ||||| |||| | |||||||||||||||||| |||||||||||||||||||||| ||||||||||| |
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| T |
47680634 |
gtcactgcatgtaggtccttcattctctgctccttcaaccacacatacatagatcaatcacgcgcctctctcattatgcttgcttagggatcatcttgcc |
47680535 |
T |
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| Q |
406 |
ctaattgaacttactttg |
423 |
Q |
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||||||||||||| |||| |
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| T |
47680534 |
ctaattgaacttaatttg |
47680517 |
T |
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