View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11386A_low_402 (Length: 238)
Name: NF11386A_low_402
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11386A_low_402 |
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Alignment Details
Target: chr6 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 553188 - 553413
Alignment:
| Q |
1 |
tcaccttatgctactgctgtgacatctatcgattctacacccaacgcaataagcctaaaagtcacaattattttcaaccatcaaaagcagttttataact |
100 |
Q |
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| T |
553188 |
tcaccttatgctactgctgtgacatctatcgattctacacccaacgcaataagcctaaaagtcacaattattttcaaccatcaaaagcagttttataact |
553287 |
T |
|
| Q |
101 |
agtttttaacatttttctttatcaacacaacatattaagacatttgtatatttttattgaaactattgtcaatacttaaaagaaaaattgatcaaacaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
553288 |
agtttttaacatttttctttatcaacacaacataataagacatttgtatatttttattgaaactattgtcaatacttaaaagaaaaattgatcaaacaag |
553387 |
T |
|
| Q |
201 |
actcaactcatcaattattaaatatt |
226 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
553388 |
actcaactcatcaattattaaatatt |
553413 |
T |
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