View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11386A_low_420 (Length: 233)
Name: NF11386A_low_420
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11386A_low_420 |
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Alignment Details
Target: chr7 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 11331559 - 11331332
Alignment:
| Q |
1 |
aagtagattcaagcagtacccggtttcgtaccaaggaaggaatcatttttgaatgtgggtctgtgtggtgggatatccacatttggaattt--gaggtta |
98 |
Q |
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| T |
11331559 |
aagtagatacaagcataacccggtttcttaccaaggaaggaatcatttttgagtgtgtgtctgtgtggtggtatatccacctctggaattttagagatta |
11331460 |
T |
|
| Q |
99 |
tatctagtcaaagtttgattcgaaaatctgtatacagacaaggactgactaatctgggttaaatctagtacatttaattttaacaatgtgaggtattccc |
198 |
Q |
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| T |
11331459 |
tagctagttcaattttgtttcgaaaatcggtatacagaaaaggaccgactaatctgggttaaatctagtacatttaattttaacaatgtgaggtattccc |
11331360 |
T |
|
| Q |
199 |
tactgggccatcttttactccaacacca |
226 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
11331359 |
tactgggccatcttttactccaacacca |
11331332 |
T |
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