View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11386A_low_451 (Length: 230)
Name: NF11386A_low_451
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11386A_low_451 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 7 - 230
Target Start/End: Original strand, 2956492 - 2956715
Alignment:
| Q |
7 |
aaaaatatgttcctttaacattgttttagggtatatgtatggcgataacgaccatgatcaaagttgtttttgtacattcgttgattttcacattcggctt |
106 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
2956492 |
aaaaatatgttcctttaacattgttttagggtatatgtatggcgataacgacgatgatcaaagttgttttcgtacattcgttgattttcacattcggctt |
2956591 |
T |
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| Q |
107 |
gcactctttgtttagaagtagagcatttcttgttcgactcatgcctttttcattgttaaggtagaatttcttgtttgtctcttgctctctttttcttggt |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2956592 |
gcactctttgtttagaagtagagcatttcttgttcgactcacgcctttttcattgttaaggtagaatttcttgtttgtctcttgctctctttttcttggt |
2956691 |
T |
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| Q |
207 |
tcatgacccattcattgctagggg |
230 |
Q |
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|||||||||||||||||||||||| |
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| T |
2956692 |
tcatgacccattcattgctagggg |
2956715 |
T |
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