View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11386A_low_514 (Length: 218)

Name: NF11386A_low_514
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11386A_low_514
NF11386A_low_514
[»] chr7 (32 HSPs)
chr7 (1-186)||(14627973-14628159)
chr7 (11-157)||(2843332-2843477)
chr7 (11-162)||(26583536-26583686)
chr7 (1-166)||(20116401-20116565)
chr7 (27-162)||(26492187-26492321)
chr7 (27-162)||(46821836-46821970)
chr7 (11-153)||(42311111-42311252)
chr7 (27-162)||(21266214-21266348)
chr7 (12-147)||(32684522-32684656)
chr7 (11-153)||(35496280-35496421)
chr7 (1-162)||(1448924-1449084)
chr7 (1-77)||(23425466-23425542)
chr7 (27-162)||(22927991-22928125)
chr7 (1-147)||(1485351-1485496)
chr7 (11-153)||(23085353-23085493)
chr7 (1-139)||(36143711-36143848)
chr7 (1-73)||(35667326-35667398)
chr7 (27-139)||(46338898-46339009)
chr7 (1-77)||(48207808-48207884)
chr7 (31-77)||(31235917-31235963)
chr7 (11-65)||(5546277-5546331)
chr7 (1-119)||(42067155-42067272)
chr7 (27-146)||(433813-433929)
chr7 (11-53)||(7640887-7640929)
chr7 (31-147)||(6001857-6001973)
chr7 (1-73)||(45199126-45199198)
chr7 (27-74)||(20083240-20083287)
chr7 (1-47)||(17499753-17499799)
chr7 (1-47)||(17553415-17553461)
chr7 (27-73)||(42408272-42408318)
chr7 (11-64)||(286682-286735)
chr7 (1-49)||(43369860-43369908)
[»] chr6 (25 HSPs)
chr6 (27-166)||(12652758-12652896)
chr6 (1-157)||(23947412-23947567)
chr6 (11-166)||(8496783-8496937)
chr6 (11-162)||(25064057-25064207)
chr6 (1-162)||(33109656-33109816)
chr6 (1-162)||(4468389-4468541)
chr6 (11-77)||(33740683-33740749)
chr6 (1-166)||(17237379-17237543)
chr6 (27-158)||(4984699-4984828)
chr6 (11-71)||(8196512-8196572)
chr6 (27-152)||(8028239-8028363)
chr6 (35-146)||(10228518-10228627)
chr6 (4-75)||(12165749-12165820)
chr6 (27-73)||(7876166-7876212)
chr6 (27-73)||(7881224-7881270)
chr6 (31-73)||(8266545-8266587)
chr6 (27-73)||(16419068-16419114)
chr6 (27-153)||(17334607-17334731)
chr6 (1-77)||(34489154-34489233)
chr6 (27-146)||(4088297-4088416)
chr6 (27-66)||(9508837-9508876)
chr6 (22-65)||(13436705-13436748)
chr6 (27-73)||(17346671-17346717)
chr6 (11-52)||(25337501-25337542)
chr6 (31-71)||(33543744-33543784)
[»] chr1 (39 HSPs)
chr1 (11-166)||(19716002-19716155)
chr1 (13-147)||(18569417-18569550)
chr1 (1-147)||(30818440-30818585)
chr1 (11-166)||(35584726-35584880)
chr1 (1-166)||(51871687-51871850)
chr1 (11-166)||(33291523-33291678)
chr1 (11-162)||(40646514-40646664)
chr1 (1-146)||(38520628-38520773)
chr1 (11-153)||(51868750-51868891)
chr1 (1-73)||(14545434-14545506)
chr1 (27-139)||(50272261-50272372)
chr1 (1-108)||(3871288-3871395)
chr1 (11-162)||(5701083-5701233)
chr1 (11-146)||(25406389-25406523)
chr1 (11-133)||(25728064-25728185)
chr1 (11-73)||(28035053-28035115)
chr1 (11-157)||(50148203-50148348)
chr1 (11-153)||(50166204-50166344)
chr1 (1-74)||(5324652-5324725)
chr1 (11-147)||(40881118-40881253)
chr1 (35-162)||(7342548-7342674)
chr1 (31-77)||(9919299-9919345)
chr1 (1-147)||(11453776-11453922)
chr1 (11-108)||(7997667-7997763)
chr1 (1-66)||(34519054-34519119)
chr1 (27-147)||(45426183-45426303)
chr1 (22-166)||(45805925-45806069)
chr1 (11-123)||(9172353-9172464)
chr1 (11-123)||(9180335-9180446)
chr1 (11-146)||(19723176-19723309)
chr1 (27-138)||(20266151-20266262)
chr1 (1-73)||(27872653-27872725)
chr1 (27-139)||(30878924-30879035)
chr1 (31-74)||(39987303-39987346)
chr1 (1-138)||(7312193-7312329)
chr1 (11-68)||(18649987-18650044)
chr1 (11-49)||(9687318-9687356)
chr1 (1-75)||(30558750-30558823)
chr1 (29-73)||(5155985-5156029)
[»] chr8 (31 HSPs)
chr8 (11-166)||(9498707-9498860)
chr8 (27-162)||(9619479-9619613)
chr8 (31-166)||(43890250-43890384)
chr8 (1-147)||(33342281-33342427)
chr8 (1-162)||(11725511-11725671)
chr8 (32-163)||(42448154-42448284)
chr8 (27-156)||(17949082-17949210)
chr8 (1-162)||(44100027-44100187)
chr8 (11-147)||(44577880-44578015)
chr8 (27-157)||(14907045-14907174)
chr8 (1-166)||(35580282-35580447)
chr8 (27-166)||(32724610-32724749)
chr8 (27-139)||(4808816-4808927)
chr8 (12-73)||(16794210-16794272)
chr8 (1-157)||(11196726-11196879)
chr8 (31-147)||(28239676-28239792)
chr8 (11-123)||(9072585-9072696)
chr8 (11-143)||(34611652-34611783)
chr8 (11-162)||(33895911-33896060)
chr8 (1-118)||(19876085-19876201)
chr8 (27-143)||(2655717-2655832)
chr8 (10-157)||(15597270-15597417)
chr8 (1-73)||(27747207-27747279)
chr8 (38-166)||(29777054-29777181)
chr8 (9-71)||(25241705-25241767)
chr8 (13-59)||(33298787-33298833)
chr8 (1-64)||(43192440-43192503)
chr8 (31-73)||(18733938-18733980)
chr8 (11-65)||(37565984-37566038)
chr8 (10-70)||(17427322-17427382)
chr8 (10-70)||(17430972-17431032)
[»] chr5 (35 HSPs)
chr5 (11-166)||(30371545-30371699)
chr5 (11-166)||(27266965-27267119)
chr5 (1-166)||(19281039-19281203)
chr5 (11-145)||(18677571-18677704)
chr5 (10-166)||(34881531-34881685)
chr5 (11-162)||(7241607-7241757)
chr5 (11-162)||(7246783-7246933)
chr5 (10-157)||(21060385-21060531)
chr5 (11-124)||(10649316-10649428)
chr5 (1-145)||(28235427-28235570)
chr5 (11-157)||(42579707-42579855)
chr5 (11-77)||(2057943-2058009)
chr5 (27-157)||(7150456-7150585)
chr5 (1-75)||(16981201-16981275)
chr5 (11-73)||(26578162-26578224)
chr5 (1-162)||(7887032-7887192)
chr5 (1-166)||(36344584-36344748)
chr5 (1-73)||(781302-781374)
chr5 (1-76)||(15570819-15570895)
chr5 (11-67)||(20257799-20257855)
chr5 (13-73)||(43261924-43261984)
chr5 (1-74)||(35475431-35475504)
chr5 (1-73)||(27576444-27576516)
chr5 (31-147)||(19259938-19260050)
chr5 (1-64)||(30298130-30298193)
chr5 (31-73)||(11767720-11767762)
chr5 (27-164)||(3271529-3271663)
chr5 (1-74)||(42432812-42432885)
chr5 (12-73)||(42886392-42886453)
chr5 (1-52)||(27751860-27751911)
chr5 (27-77)||(14211110-14211160)
chr5 (28-73)||(1582243-1582288)
chr5 (28-73)||(1602527-1602572)
chr5 (1-73)||(6445849-6445921)
chr5 (27-71)||(43148645-43148689)
[»] chr3 (28 HSPs)
chr3 (11-166)||(4178380-4178534)
chr3 (11-166)||(4172382-4172536)
chr3 (1-156)||(39917491-39917645)
chr3 (11-123)||(35499306-35499418)
chr3 (11-166)||(12115909-12116063)
chr3 (11-162)||(25162256-25162405)
chr3 (11-157)||(25631632-25631777)
chr3 (10-166)||(46934458-46934613)
chr3 (11-166)||(36905937-36906091)
chr3 (11-157)||(44907504-44907649)
chr3 (11-162)||(32607287-32607437)
chr3 (27-157)||(38855158-38855286)
chr3 (1-131)||(38440672-38440801)
chr3 (1-123)||(49552318-49552439)
chr3 (6-77)||(3850555-3850626)
chr3 (27-121)||(14464368-14464461)
chr3 (27-76)||(2342396-2342445)
chr3 (1-76)||(46178481-46178557)
chr3 (11-162)||(50611522-50611672)
chr3 (11-73)||(17237710-17237772)
chr3 (31-147)||(37169068-37169180)
chr3 (31-75)||(22802927-22802971)
chr3 (1-73)||(29503370-29503442)
chr3 (41-166)||(51202384-51202508)
chr3 (28-73)||(21488019-21488064)
chr3 (27-64)||(31793996-31794033)
chr3 (31-144)||(36735277-36735389)
chr3 (29-65)||(42719436-42719472)
[»] chr2 (36 HSPs)
chr2 (11-156)||(27249256-27249400)
chr2 (11-162)||(30420503-30420653)
chr2 (1-153)||(8971721-8971874)
chr2 (11-157)||(6173463-6173608)
chr2 (27-166)||(36233827-36233965)
chr2 (12-166)||(2808576-2808729)
chr2 (14-157)||(9986453-9986597)
chr2 (11-142)||(459379-459509)
chr2 (1-94)||(26025504-26025597)
chr2 (1-162)||(34598813-34598974)
chr2 (1-77)||(4192749-4192825)
chr2 (27-162)||(21570529-21570663)
chr2 (1-164)||(40626122-40626284)
chr2 (11-153)||(45128040-45128180)
chr2 (1-75)||(31581814-31581888)
chr2 (11-157)||(41712870-41713015)
chr2 (1-138)||(7015805-7015941)
chr2 (1-77)||(27477065-27477141)
chr2 (1-156)||(3270323-3270477)
chr2 (1-75)||(3725093-3725167)
chr2 (11-73)||(32680687-32680749)
chr2 (1-77)||(32913152-32913228)
chr2 (11-153)||(20047187-20047327)
chr2 (1-64)||(22421659-22421722)
chr2 (47-162)||(33229129-33229243)
chr2 (11-77)||(42949624-42949691)
chr2 (11-73)||(39641964-39642026)
chr2 (1-162)||(40660026-40660183)
chr2 (1-73)||(8805781-8805853)
chr2 (35-162)||(25086862-25086986)
chr2 (1-73)||(32197889-32197961)
chr2 (1-77)||(41430938-41431015)
chr2 (11-71)||(27949339-27949399)
chr2 (31-73)||(18694961-18695004)
chr2 (96-147)||(31581891-31581942)
chr2 (1-65)||(8308097-8308159)
[»] chr4 (48 HSPs)
chr4 (11-147)||(38706815-38706950)
chr4 (32-166)||(4643686-4643821)
chr4 (11-162)||(43444227-43444377)
chr4 (1-162)||(10389848-10390008)
chr4 (1-156)||(21089992-21090147)
chr4 (11-166)||(9283741-9283895)
chr4 (27-166)||(9528999-9529137)
chr4 (11-162)||(20569086-20569236)
chr4 (1-147)||(34024531-34024676)
chr4 (11-146)||(35965079-35965214)
chr4 (27-157)||(1531745-1531875)
chr4 (11-162)||(9645654-9645804)
chr4 (11-156)||(2115693-2115837)
chr4 (11-162)||(25273709-25273864)
chr4 (1-153)||(31381766-31381917)
chr4 (1-147)||(10359641-10359787)
chr4 (27-144)||(47416736-47416852)
chr4 (1-73)||(51317908-51317980)
chr4 (11-166)||(43154126-43154279)
chr4 (11-162)||(53616756-53616906)
chr4 (27-162)||(50766630-50766766)
chr4 (1-73)||(8009455-8009526)
chr4 (11-75)||(56194519-56194583)
chr4 (35-162)||(6972644-6972769)
chr4 (31-147)||(5333656-5333768)
chr4 (1-162)||(37188688-37188847)
chr4 (1-69)||(1008221-1008289)
chr4 (48-167)||(867986-868104)
chr4 (26-69)||(14183729-14183772)
chr4 (10-75)||(18139016-18139082)
chr4 (96-166)||(44947233-44947303)
chr4 (10-75)||(49126229-49126295)
chr4 (1-77)||(35261109-35261186)
chr4 (27-76)||(49680456-49680505)
chr4 (27-162)||(27593959-27594091)
chr4 (31-73)||(5333584-5333626)
chr4 (31-77)||(12265373-12265419)
chr4 (31-65)||(23100617-23100651)
chr4 (11-64)||(29965565-29965618)
chr4 (1-68)||(21405440-21405508)
chr4 (1-73)||(32952842-32952913)
chr4 (96-156)||(50179611-50179671)
chr4 (1-47)||(1931810-1931856)
chr4 (11-57)||(2624436-2624482)
chr4 (27-71)||(23329094-23329138)
chr4 (27-63)||(46991251-46991287)
chr4 (27-71)||(49072878-49072922)
chr4 (31-71)||(52098044-52098084)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-147)||(8557-8702)
[»] scaffold0003 (1 HSPs)
scaffold0003 (27-156)||(361917-362043)
[»] scaffold0146 (1 HSPs)
scaffold0146 (11-73)||(16427-16489)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-69)||(201466-201534)
[»] scaffold0495 (1 HSPs)
scaffold0495 (35-146)||(5237-5346)
[»] scaffold0426 (1 HSPs)
scaffold0426 (27-162)||(6161-6294)
[»] scaffold0608 (1 HSPs)
scaffold0608 (96-156)||(70-130)


Alignment Details
Target: chr7 (Bit Score: 147; Significance: 1e-77; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 14627973 - 14628159
Alignment:
Q  1 aatcacaaggaaaa-aacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttga 99  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  14627973 aatcacaaggaaaaaaacctatatttatgtgaaaatcacttatttagattgaattagagaaaaaaagatgaagaggaggtaatttccggtaaaaatttga 14628072  T
Q  100 cccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactttcaacaacaccattcatagt 186  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||    
T  14628073 cccaaaaccacccttcaatgaagacactgtaagaaaaaacttagagagcgaaaactagggccgactttcaacaacaccattcatagt 14628159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 2843332 - 2843477
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| || ||||||||||||||||||||| |  |||| | | || | ||||||||||||| |    
T  2843332 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagggg-tgttttcaggtcaagaattgacccaaaaccac 2843430  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactag 157  Q
    ||||||||||||| | ||||||| ||||||||||||| |||||||||    
T  2843431 ccttcaatgaagaaattgtaagagaaaacctagagagagaaaactag 2843477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 162
Target Start/End: Complemental strand, 26583686 - 26583536
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | | |||||||||||||||||||||||| |||||| ||||||||||||| ||||| ||||| | | || | |||||| |||||| |    
T  26583686 aaaaaacctagatatatatgaaaatcacttatttagattgaaatagagataaaaagatgaaga-ggggtgatttcaggtcaagaattgaccaaaaaccac 26583588  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    || |||||||||| |||||||||||||||||||| || ||||||||| ||||    
T  26583587 ccctcaatgaagaaactgtaagaaaaaacctagaaagagaaaactagggccg 26583536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 20116565 - 20116401
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||||| ||||||||||| || | |||||||||||||||||||||||||| |||| |||||||||||||||  |||| ||||| | | |||| |||||    
T  20116565 aatcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagatagaaaaagatgaaga-agggtgatttcaggtcaaaaattgac 20116467  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    |||||||  ||| ||| |||||| |||  |||| ||||| ||||||| ||||||||| ||||||||    
T  20116466 ccaaaactacccctcattgaagaaacttgaagagaaaacatagagagagaaaactagggccgactt 20116401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 162
Target Start/End: Complemental strand, 26492321 - 26492187
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||| ||||| ||||| | | || | ||||||||||||| ||| |||||||||| ||    
T  26492321 tgtgaaaatcacttatttaaattgaaatagagagaaaaagatgaaga-ggggttatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaac 26492223  T
Q  127 tgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    ||||||| |||| ||||||||  |||||||| ||||    
T  26492222 tgtaagacaaaatctagagagataaaactagggccg 26492187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 27 - 162
Target Start/End: Complemental strand, 46821970 - 46821836
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    |||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| | | || | ||||||||||||| ||| |||||||| | |     
T  46821970 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaaaaaat 46821872  T
Q  127 tgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    | ||||| ||||||||||||| ||||||||| ||||    
T  46821871 tataagagaaaacctagagagagaaaactagggccg 46821836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 153
Target Start/End: Complemental strand, 42311252 - 42311111
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||| ||||||||||||||||||| ||||||||||| |||||||||||  | ||||| | | || | ||||||||||||| |    
T  42311252 aaaaaacctagatctatgtgaatatcacttatttagattgaaatagagagaaaatgatgaagaggga-tgatttcaggtcaagaattgacccaaaaccac 42311154  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaa 153  Q
    || ||| |||||| ||| ||||| ||||||||||||| |||||    
T  42311153 ccctcagtgaagaaactctaagagaaaacctagagagagaaaa 42311111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 27 - 162
Target Start/End: Complemental strand, 21266348 - 21266214
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    |||||||||||||||||||||||||| || ||||||||||||||||| | ||| |||||   | || | ||||||||||||| ||| ||||| |||| ||    
T  21266348 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-gaggtgatttcatgtcaataattgacccaaaaccacccctcaataaagaaac 21266250  T
Q  127 tgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    || |||||||||| || |||| ||||||||| ||||    
T  21266249 tggaagaaaaaacttaaagagagaaaactagggccg 21266214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 12 - 147
Target Start/End: Complemental strand, 32684656 - 32684522
Alignment:
Q  12 aaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccc 111  Q
    ||||||||| || | |||||||||||||||||||||||||| ||||||||||| ||||||||    || ||||| | | || | ||||||||||||| ||    
T  32684656 aaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaacgatgaaga-catgtgatttcaggtcaagaattgacccaaaaccacc 32684558  T
Q  112 cttcaatgaagacactgtaagaaaaaacctagagag 147  Q
    | |||||||||| || |||||| |||||||||||||    
T  32684557 cctcaatgaagaaaccgtaagagaaaacctagagag 32684522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 153
Target Start/End: Original strand, 35496280 - 35496421
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||||||||||||||| |||||||||| ||||||||||||||||||||   ||| ||||  | | || | ||||||||||||| |    
T  35496280 aaaaaacctagatctatgtgaaaatcacttaattagattgaaatagagagaaaaagatgaaga-ttggtgattttaggtcaagaattgacccaaaaccac 35496378  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaa 153  Q
    || |||||||||| || |||||| |||||||| |||| |||||    
T  35496379 ccctcaatgaagaaacagtaagagaaaacctaaagagagaaaa 35496421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 1448924 - 1449084
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    ||||||||  |||||| ||| || | |||||||||||||||||||||||||| |||||||||| ||||||||    ||| ||||| | | || | |||||    
T  1448924 aatcacaaataaaaaatctagatctatgtgaaaatcacttatttagattgaaatagagagaaagagatgaag-tttggttatttcaggtcaagaattgac 1449022  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    |||||||| ||| ||||  ||||  ||| |||||||||||||||||| ||||||||| ||||    
T  1449023 ccaaaaccacccctcaacaaagaatctggaagaaaaaacctagagagagaaaactagggccg 1449084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 23425466 - 23425542
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggg 77  Q
    |||||||| ||||||||||| || | ||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  23425466 aatcacaaagaaaaaacctagatctatgtaaaaatcacttatttagattgaaatatagagaaaaagatgaagagggg 23425542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 162
Target Start/End: Original strand, 22927991 - 22928125
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    ||||||| |||||||||||||||||| |||||||||||||||||| | ||||| ||||| | | || | ||||||||||||| |||   |||||||| ||    
T  22927991 tgtgaaagtcacttatttagattgaaatagagagaaaaagatgaa-aaggggtgatttcaggtcaagaattgacccaaaaccaccccctaatgaagaaac 22928089  T
Q  127 tgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
     | |||| ||||||||||||| ||||| ||| ||||    
T  22928090 gggaagagaaaacctagagagagaaaattagggccg 22928125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 1485351 - 1485496
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||||| ||||||| ||| || | ||||||| |||||||||||||||||| ||||||||||||||||||||  |||| ||||  | | || | || ||    
T  1485351 aatcacaaagaaaaaatctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaaga-cgggtgattttaggtcaagaattaac 1485449  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagag 147  Q
    |||||||| |||  ||||||||| || | |||| |||||||||||||    
T  1485450 ccaaaaccaccccccaatgaagaaacgggaagagaaaacctagagag 1485496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 153
Target Start/End: Complemental strand, 23085493 - 23085353
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||||||| ||| |||||||||||||| |||| ||||||||||||||||||||| |||||   | || | ||||||||||||| |    
T  23085493 aaaaaacctagatctatgtgaaagtcaattatttagattgaaatagaaagaaaaagatgaagagggggtgatttcaagtcaataattgacccaaaaccac 23085394  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaa 153  Q
    ||  ||||||||| || | |||| ||||||||||||| |||||    
T  23085393 cc-ccaatgaagaaac-ggaagagaaaacctagagagagaaaa 23085353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 36143848 - 36143711
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||| | ||||||||||| || |  ||||||| ||||||||||||||||||||||||||||||||||||||  || |||||||   | |||||||||     
T  36143848 aatcacgaagaaaaaacctagatctacgtgaaaaacacttatttagattgaattagagagaaaaagatgaaga-tggataatttcacgttaaaatttgat 36143750  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaac 139  Q
    |||||||  ||| |||||||| | || | ||||||||||    
T  36143749 ccaaaacaacccctcaatgaaaaaacggaaagaaaaaac 36143711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 35667326 - 35667398
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    ||||| || ||||||||||| || | |||||||||||||||||||||||||| |||||||||||| |||||||    
T  35667326 aatcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaatatgaaga 35667398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 46339009 - 46338898
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    ||||||||||||||||||| |||||| || ||||||||||||||||| ||| ||||||| | | || | ||||||||||||  ||| |||||||||| |     
T  46339009 tgtgaaaatcacttatttacattgaaataaagagaaaaagatgaaga-gggataatttcaggtcaagaattgacccaaaactacccctcaatgaagaaat 46338911  T
Q  127 tgtaagaaaaaac 139  Q
    ||||||| |||||    
T  46338910 tgtaagagaaaac 46338898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 48207884 - 48207808
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggg 77  Q
    |||||||| |||||||| || || | |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  48207884 aatcacaaagaaaaaacatagatctatgtgaaaatcacttatttagattgaaatattgagaaaaagatgaagagggg 48207808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 31235917 - 31235963
Alignment:
Q  31 aaaatcacttatttagattgaattagagagaaaaagatgaagagggg 77  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  31235917 aaaatcacttatttagattgaaatagagagaaaaagatgaagagggg 31235963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 5546331 - 5546277
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaa 65  Q
    ||||||| || |||| |||||||||||||||||||||||||| ||||||||||||    
T  5546331 aaaaaacttaaatttatgtgaaaatcacttatttagattgaaatagagagaaaaa 5546277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 42067155 - 42067272
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    ||||| || ||||||| |||||| | |||||||||||||||||||||||||| || ||| || |||||||||| | ||| ||||| | | || | |||||    
T  42067155 aatcagaaagaaaaaatctatatctatgtgaaaatcacttatttagattgaaatatagataacaagatgaaga-gaggtgatttcaggtcaagaattgac 42067253  T
Q  101 ccaaaaccccccttcaatg 119  Q
    |||||| | ||||||||||    
T  42067254 ccaaaatcacccttcaatg 42067272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 146
Target Start/End: Original strand, 433813 - 433929
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||| | ||| | ||||| | | |||| ||||||||||||| |||  ||||||||| ||    
T  433813 tgtgaaagtcatttatttagattgaaatagagagaaaaagatgaa-aagggatgatttcaggtcaaaaattgacccaaaaccaccc--caatgaagaaac 433909  T
Q  127 tgtaagaaaaaacctagaga 146  Q
       |||| ||||||||||||    
T  433910 cagaagagaaaacctagaga 433929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 7640887 - 7640929
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaat 53  Q
    ||||||||||||| | |||||||||||||||||||||||||||    
T  7640887 aaaaaacctatatctatgtgaaaatcacttatttagattgaat 7640929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 147
Target Start/End: Complemental strand, 6001973 - 6001857
Alignment:
Q  31 aaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaa-ccccccttcaatgaagacactgt 129  Q
    ||||||||||||||||||| || ||| ||||||||||||||||  |||| ||||| | | |||| |||| |||||| | |||||||||| |||| | ||     
T  6001973 aaaatcacttatttagattaaaatagggagaaaaagatgaaga-tgggtgatttcaggtcaaaaattgatccaaaatcaccccttcaataaagaaaatgg 6001875  T
Q  130 aagaaaaaacctagagag 147  Q
    |||| |||||||| ||||    
T  6001874 aagagaaaacctaaagag 6001857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 45199126 - 45199198
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||| |||||||| || || | | ||||||||||||||||| ||| || || |||||||||||||||||    
T  45199126 aatcacaaagaaaaaacttagatctatatgaaaatcacttatttaaattaaaatatagagaaaaagatgaaga 45199198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 20083287 - 20083240
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagag 74  Q
    |||||||||  ||||||||||||||| |||| ||||||||||||||||    
T  20083287 tgtgaaaattgcttatttagattgaaatagaaagaaaaagatgaagag 20083240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17499753 - 17499799
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttaga 47  Q
    |||||||| ||||||||||| || ||||||||||| |||||||||||    
T  17499753 aatcacaatgaaaaaacctagatctttgtgaaaataacttatttaga 17499799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 17553461 - 17553415
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttaga 47  Q
    |||||||| ||||||||||| || ||||||||||| |||||||||||    
T  17553461 aatcacaatgaaaaaacctagatctttgtgaaaataacttatttaga 17553415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 42408318 - 42408272
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||| || |||||||||||||| || |||||||||||||||||    
T  42408318 tgtgaaaaacaattatttagattgaaataaagagaaaaagatgaaga 42408272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 286682 - 286735
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaa 64  Q
    |||||||||| || | |||| |||||||||||||||||| ||||||| ||||||    
T  286682 aaaaaacctagatatatgtggaaatcacttatttagattaaattagatagaaaa 286735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43369860 - 43369908
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagatt 49  Q
    |||||| | |||||||| ||||| | |||||||||||||||||||||||    
T  43369860 aatcacgaagaaaaaacttatatctatgtgaaaatcacttatttagatt 43369908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 166
Target Start/End: Complemental strand, 12652896 - 12652758
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||| | | || | ||||||||||||| ||| |||||||||| ||    
T  12652896 tgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaac 12652798  T
Q  127 tgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    ||| ||| ||||||||||||| ||||||||| ||||||||    
T  12652797 tgtgagagaaaacctagagagagaaaactagggccgactt 12652758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 23947412 - 23947567
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    ||||| || ||||||||||| || | |||||||||||||||||||||||||| ||||||||||| ||||||||  |||| ||||| | | || | |||||    
T  23947412 aatcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaacgatgaaga-tgggtgatttcaggtcaagaattgac 23947510  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactag 157  Q
    |||||||| ||| |||||||||| |||  |||||||||||||||||| |||||||||    
T  23947511 ccaaaaccacccctcaatgaagaaactagaagaaaaaacctagagagagaaaactag 23947567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 166
Target Start/End: Complemental strand, 8496937 - 8496783
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| | | || | ||||| ||||||| |    
T  8496937 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-ggggtgatttcaggtcaagaattgactcaaaaccac 8496839  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    || |||||||||| | ||||||| ||||||||||||| |||||||||  |||||||    
T  8496838 ccctcaatgaagaaattgtaagagaaaacctagagagagaaaactaggaccgactt 8496783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 162
Target Start/End: Complemental strand, 25064207 - 25064057
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| || ||||||||||||||||| | ||| ||||| | | || | ||||||||||||| |    
T  25064207 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-gaggtgatttcaggtcaagaattgacccaaaaccac 25064109  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    || |||||||||| | ||||||| ||||||||||||| ||||||||| ||||    
T  25064108 ccctcaatgaagaaattgtaagagaaaacctagagagagaaaactagggccg 25064057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 33109816 - 33109656
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||||| ||||||||||| || | |||||||||||||||||||||||||| || |||||||||||||||||  ||   ||||  | | |||| |||||    
T  33109816 aatcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-tggacgattttaggtcaaaaattgac 33109718  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    |||||||| ||| |||||||||| |||| |||| |||||||| | || ||||||||| ||||    
T  33109717 ccaaaaccacccgtcaatgaagaaactggaagagaaaacctaaaaagagaaaactagggccg 33109656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 4468541 - 4468389
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||||| ||||||||||| || | | |||||||||||||||||||||||| ||||||||| |||||||||| ||||| | |||   | || | |||||    
T  4468541 aatcacaaagaaaaaacctagatctatatgaaaatcacttatttagattgaaatagagagaacaagatgaaga-ggggtgacttcatgtcaagaattgac 4468443  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    |||||| |         |||||| ||||||||||||||||||||||||||||||||||||||    
T  4468442 ccaaaatc--------gtgaagaaactgtaagaaaaaacctagagagtgaaaactagagccg 4468389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 33740683 - 33740749
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggg 77  Q
    |||||||||| || | |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33740683 aaaaaacctaaatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagagggg 33740749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 17237379 - 17237543
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||||| ||||||||||| || | ||||||||| |||||||||||||||| || ||||||||||||||||| ||||| |||||   | || | |||||    
T  17237379 aatcacaaagaaaaaacctagatctatgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga-ggggtgatttcatgtcaagaattgac 17237477  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    |||||||| ||| |||||| | |  ||  || | ||||| ||||||| ||||||||| ||||||||    
T  17237478 ccaaaaccacccctcaatggaaaatctagaaaagaaaacatagagagagaaaactagggccgactt 17237543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 158
Target Start/End: Original strand, 4984699 - 4984828
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||  | || ||||| | | || | ||||||||||||| ||| |||||| ||| ||    
T  4984699 tgtgaaaatcacttatttagattgaaatagagag-aaaagatgaaga-tgagtgatttcaggtcaagaattgacccaaaaccacccctcaatggagaaac 4984796  T
Q  127 tgtaagaaaaaacctagagagtgaaaactaga 158  Q
    ||||||| |||||||| ||||  |||||||||    
T  4984797 tgtaagagaaaacctaaagagataaaactaga 4984828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 8196512 - 8196572
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaa 71  Q
    |||||||||| || | |||||||||||||||||||||||||| ||||||||||||||||||    
T  8196512 aaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaa 8196572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 8028239 - 8028363
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||  ||||| ||| | ||| || | ||||||||||| | ||  |||||||||| ||    
T  8028239 tgtgaaaatcacttatttagattgaaacagagagaaaaagatgaag-tggggtgattccagatcaataattgacccaaaatcacctctcaatgaagaaac 8028337  T
Q  127 tgtaagaaaaaacctagagagtgaaa 152  Q
    ||||  | |||||||| |||| ||||    
T  8028338 tgtactagaaaacctaaagagagaaa 8028363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 10228627 - 10228518
Alignment:
Q  35 tcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacactgtaagaa 134  Q
    |||||||||||||||||| |||||||| ||||||||||| ||||| ||||| | | || | ||||||||||||| |||  ||||||||| || | ||||     
T  10228627 tcacttatttagattgaagtagagagagaaagatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccaccc-ccaatgaagaaacgggaagag 10228530  T
Q  135 aaaacctagaga 146  Q
    ||||||||||||    
T  10228529 aaaacctagaga 10228518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 12165820 - 12165749
Alignment:
Q  4 cacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagg 75  Q
    ||||| ||||||||||| || | |||||||||||||||||||||||||| |||  | |||||||||||||||    
T  12165820 cacaaagaaaaaacctaaatctatgtgaaaatcacttatttagattgaaataggcataaaaagatgaagagg 12165749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 7876166 - 7876212
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||||||||||||||||||||| || |||||||||||||||||    
T  7876166 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga 7876212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 7881224 - 7881270
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||||||||||||||||||||| || |||||||||||||||||    
T  7881224 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga 7881270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 8266587 - 8266545
Alignment:
Q  31 aaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  8266587 aaaatcacttatttagattgaagtagagagaaaaagatgaaga 8266545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 16419114 - 16419068
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||    
T  16419114 tgtgaaagtcacttatttagattgaaatagagagaaaaagatgaaga 16419068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 17334731 - 17334607
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    |||||||||||||||||||||||||| || | |||||||||||||||   ||| ||||| ||| || | | || |||||||| ||| |||||||||| |     
T  17334731 tgtgaaaatcacttatttagattgaaataaacagaaaaagatgaaga-ttggtgatttcagatcaagaatcgatccaaaaccaccc-tcaatgaagaaat 17334634  T
Q  127 tgtaagaaaaaacctagagagtgaaaa 153  Q
    ||||||| |||| |||||||| |||||    
T  17334633 tgtaagagaaaatctagagagagaaaa 17334607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 34489233 - 34489154
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaa-tcacttatttagat--tgaattagagagaaaaagatgaagagggg 77  Q
    |||||| | ||||||||||| || | |||||||| ||||||||||| ||  |||||||||||||||||||||||||||||    
T  34489233 aatcacgaagaaaaaacctagatctatgtgaaaaatcacttatttatatattgaattagagagaaaaagatgaagagggg 34489154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 146
Target Start/End: Complemental strand, 4088416 - 4088297
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaaga-tgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagaca 125  Q
    |||||||||||||||||||||||| | |||||| ||||| | |||||| ||| | ||||| | | || | ||||||||||||| ||| ||||| ||||      
T  4088416 tgtgaaaatcacttatttagattgtaatagagataaaaaaaatgaagatggg-tgatttcaggtcaagaattgacccaaaaccacccctcaataaagaac 4088318  T
Q  126 ctgtaagaaaaaacctagaga 146  Q
    |||||| | ||||||||||||    
T  4088317 ctgtaaaagaaaacctagaga 4088297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 9508837 - 9508876
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaag 66  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  9508837 tgtgaaaatcacttatttagattgaattaaaaagaaaaag 9508876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 13436748 - 13436705
Alignment:
Q  22 atttttgtgaaaatcacttatttagattgaattagagagaaaaa 65  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||    
T  13436748 atttatgtgaaaatcacttatttaaattgaaatagagagaaaaa 13436705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 17346671 - 17346717
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    ||||||||||| ||||||| ||| ||||||| |||||||||||||||    
T  17346671 tgtgaaaatcatttatttatattaaattagaaagaaaaagatgaaga 17346717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 25337542 - 25337501
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaa 52  Q
    |||||||||| |||| ||||||||||| ||||||||||||||    
T  25337542 aaaaaacctagatttatgtgaaaatcatttatttagattgaa 25337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 33543744 - 33543784
Alignment:
Q  31 aaaatcacttatttagattgaattagagagaaaaagatgaa 71  Q
    ||||| |||||||||||||||| || |||||||||||||||    
T  33543744 aaaattacttatttagattgaaatatagagaaaaagatgaa 33543784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 19716002 - 19716155
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| || |||||||||||||||||  |||| ||||| ||| || | ||||||||||||| |    
T  19716002 aaaaaacctaaatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga--gggtgatttcagatcaagaattgacccaaaaccac 19716099  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    |  |||||||||| | |||||||||||||||| |||| ||||||||| ||||||||    
T  19716100 ctctcaatgaagaaattgtaagaaaaaacctaaagagagaaaactagggccgactt 19716155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 147
Target Start/End: Original strand, 18569417 - 18569550
Alignment:
Q  13 aaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccccc 112  Q
    |||||||| || | |||||||||||||||||||||||||| ||||||||||||||||||||   ||| |||||   | |||| ||||||||||||| |||    
T  18569417 aaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga-caggtgatttcttgtcaaaaattgacccaaaaccaccc 18569515  T
Q  113 ttcaatgaagacactgtaagaaaaaacctagagag 147  Q
     |||||||||| |||| |||| |||||||||||||    
T  18569516 ctcaatgaagaaactggaagagaaaacctagagag 18569550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 30818440 - 30818585
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    ||||||||  |||||| ||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||  |||| ||||| | | || | |||||    
T  30818440 aatcacaaaaaaaaaaactagatttatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga-tgggtgatttcaggtcaataattgac 30818538  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagag 147  Q
    |||||||  ||| |||||||||| ||||||| | ||||| |||||||    
T  30818539 ccaaaactacccctcaatgaagaaactgtaaaagaaaacttagagag 30818585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 35584726 - 35584880
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| || |||||||||||||||||  | || ||||| | | || | ||||||||||| | |    
T  35584726 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-tgagtgatttcaggttaagaattgacccaaaatcac 35584824  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    || |||||||||| | ||||||| ||||||||||||  ||||||||| || |||||    
T  35584825 ccctcaatgaagaaattgtaagagaaaacctagagaaagaaaactagggcggactt 35584880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 51871850 - 51871687
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||||| ||||||| ||| || | ||||||| |||||||||||||||||| |||||||||||||||||||||||| | ||||  | | || | |||||    
T  51871850 aatcacaaagaaaaaagctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagagggg-tgattttaggtcaagaattgac 51871752  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    |||||||| |||  ||||||||| ||   |||| ||||||||||||| ||||| ||| ||||||||    
T  51871751 ccaaaaccacccc-caatgaagaaacgagaagagaaaacctagagagagaaaattagggccgactt 51871687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 33291523 - 33291678
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaaga-tgaagagggggtaatttccgataaaaatttgacccaaaaccc 109  Q
    ||||||| || |||| ||||||||||||||||||| |||||| |||| ||||||| | |||||||||| | ||||| | | || | |||||||||||||     
T  33291523 aaaaaacatagatttatgtgaaaatcacttatttatattgaaatagaaagaaaaaaaatgaagagggg-tgatttcaggtcaagaattgacccaaaacca 33291621  T
Q  110 cccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    ||| |||||||| | ||| |||||||||| |||||||  ||||||||| ||||||||    
T  33291622 cccctcaatgaaaaaactataagaaaaaatctagagaaagaaaactagggccgactt 33291678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 162
Target Start/End: Complemental strand, 40646664 - 40646514
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || |  ||||||||||||||||||||||||| || | ||||||||||||||| | | | ||||  | | || | ||||||||||||| |    
T  40646664 aaaaaacctagatctacgtgaaaatcacttatttagattgaaataaatagaaaaagatgaagatgag-tgattttaggtcaagaattgacccaaaaccac 40646566  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    || |||||||||| | ||||||| ||||||||||||| ||||||||| ||||    
T  40646565 ccctcaatgaagaaattgtaagagaaaacctagagagagaaaactagggccg 40646514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 38520628 - 38520773
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||| | |||||||| || || | |||||||||||||||||||||| ||| ||||||||||||||||||||  | || ||||| | |||||| ||||     
T  38520628 aatcacgaagaaaaaacatagatctatgtgaaaatcacttatttagatcgaaatagagagaaaaagatgaaga-tgagtgatttcaggtaaaaaattgat 38520726  T
Q  101 ccaaaacc-ccccttcaatgaagacactgtaagaaaaaacctagaga 146  Q
    |||||||| |||| | |||||||| |||| |||| ||||||||||||    
T  38520727 ccaaaaccacccccttaatgaagaaactgaaagagaaaacctagaga 38520773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 153
Target Start/End: Original strand, 51868750 - 51868891
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||||||| |||||||||||||||||| |||||||||||||||||||| ||||| ||||| | | || | || |||||||||| |    
T  51868750 aaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaaga-ggggtgatttcaggtcaagaattaacccaaaaccac 51868848  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaa 153  Q
    ||  ||||||||| || | |||| |||||||| |||| |||||    
T  51868849 cccccaatgaagaaacgggaagagaaaacctaaagagagaaaa 51868891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 14545506 - 14545434
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||| ||||||||||| || | |||||||||||||||||||||||||| || |||||||||||||||||    
T  14545506 aatcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaaga 14545434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 27 - 139
Target Start/End: Original strand, 50272261 - 50272372
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    ||||||||| |||||||||||||||| || ||||||||||||||| | ||||| ||||| | | || | ||||||||||||| |||||||||||||| |     
T  50272261 tgtgaaaattacttatttagattgaaataaagagaaaaagatgaata-ggggtgatttcaggtcaagaattgacccaaaaccacccttcaatgaagaaat 50272359  T
Q  127 tgtaagaaaaaac 139  Q
    ||||||| |||||    
T  50272360 tgtaagagaaaac 50272372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 3871395 - 3871288
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||||| |||||||| || || | |||||||||||||||||||||||||| | |||||| ||||||||| ||||||| ||||| ||| || | || ||    
T  3871395 aatcacaaagaaaaaacttagatctatgtgaaaatcacttatttagattgaaattgagagagaaagatgaaaagggggtgatttcagatcaagaattaac 3871296  T
Q  101 ccaaaacc 108  Q
    ||||||||    
T  3871295 ccaaaacc 3871288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 162
Target Start/End: Complemental strand, 5701233 - 5701083
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||||||||||||||||||| |||||| || ||||||||||||||||| ||||| ||||| | | ||   ||||||||||  | |    
T  5701233 aaaaaacctagatctatgtgaaaatcacttatttaaattgaaataaagagaaaaagatgaaga-ggggtgatttcaggtcaagtattgacccaaagtcac 5701135  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    || ||||| |||| | ||||||| ||||| ||||||| ||||||||| ||||    
T  5701134 ccctcaataaagaaattgtaagagaaaacttagagagagaaaactagggccg 5701083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 25406389 - 25406523
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||||||| |||||||||||||||||| |||||||||||||||||||||| | | ||||| | | || | ||||||||||| | |    
T  25406389 aaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggtg-tgatttcaggtcaagaattgacccaaaatcac 25406487  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagaga 146  Q
    ||  ||||||||| || | |||||||||| ||||||    
T  25406488 cccccaatgaagaaacgggaagaaaaaacttagaga 25406523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 133
Target Start/End: Original strand, 25728064 - 25728185
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| || ||||||||||||||||||| | | ||||| | | || | ||||||||||||| |    
T  25728064 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggag-tgatttcaggtcaagaattgacccaaaaccac 25728162  T
Q  111 ccttcaatgaagacactgtaaga 133  Q
    || ||| |||||| | |||||||    
T  25728163 ccgtcattgaagaaattgtaaga 25728185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 28035115 - 28035053
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||||| || | |||||||||||||||||||||||||| ||||||||||||||||||||    
T  28035115 aaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga 28035053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 50148348 - 50148203
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||||||||||||||||||||||| || || |||||||| ||||||||  || | ||||| |||  | | ||||||||||||| |    
T  50148348 aaaaaacctagatctatgtgaaaatcacttatttagattaaaataaagagaaaaggatgaaga-tggatgatttcagatctagaattgacccaaaaccac 50148250  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactag 157  Q
    || |||||||||| | | ||||| |||| |||||||| |||||||||    
T  50148249 ccctcaatgaagaaattataagagaaaatctagagagagaaaactag 50148203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 153
Target Start/End: Original strand, 50166204 - 50166344
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||||||| |||||||||||||||||| |||| |||||||||| |||| |||| |||||| | | || | ||||||||||||| |    
T  50166204 aaaaaacctaaatctatgtgaaattcacttatttagattgaaatagatagaaaaagataaaga-ggggcaatttcaggtcaataattgacccaaaaccac 50166302  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaa 153  Q
    ||  ||||||||| || | |||| ||||||||||||| |||||    
T  50166303 cc-ccaatgaagaaacgggaagagaaaacctagagagagaaaa 50166344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 5324652 - 5324725
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagag 74  Q
    |||||||| | |||||| || ||||  ||||||||||||||||||||||||| |||||||||||||||||||||    
T  5324652 aatcacaaaggaaaaacttaaatttacgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagag 5324725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 147
Target Start/End: Original strand, 40881118 - 40881253
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || |  |||||||||||| |||||||||||| ||||||||||||||||||||  | || ||||  | | || | |||||||||||||      
T  40881118 aaaaaacctagatctaagtgaaaatcactcatttagattgaaatagagagaaaaagatgaaga-tgagtgattttaggtcaagaattgacccaaaaccat 40881216  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagag 147  Q
    || |||||||||| || |||||| |||||||||||||    
T  40881217 ccctcaatgaagaaacggtaagagaaaacctagagag 40881253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 35 - 162
Target Start/End: Complemental strand, 7342674 - 7342548
Alignment:
Q  35 tcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacactgtaagaa 134  Q
    |||||||||||||||||| |||| | ||||| ||||||||||| | ||||| | | |||| ||||||||||||| |||  ||||||||| || | ||||     
T  7342674 tcacttatttagattgaaatagataaaaaaatatgaagagggg-tgatttcaggtcaaaaattgacccaaaaccaccccccaatgaagaaacgggaagag 7342576  T
Q  135 aaaacctagagagtgaaaactagagccg 162  Q
    ||||||||||||| ||||| ||| ||||    
T  7342575 aaaacctagagagagaaaattagggccg 7342548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 9919345 - 9919299
Alignment:
Q  31 aaaatcacttatttagattgaattagagagaaaaagatgaagagggg 77  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  9919345 aaaatcacttatttagattgaaatagagagaaaaagatgaagagggg 9919299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 11453922 - 11453776
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaatt--agagagaaaaagatgaagagggggtaatttccgataaaaatttg 98  Q
    |||||||| ||||||||||| || | |||||||| ||||||||||||||||| |  |||||||||||||||||||  | || |||||   | |||| |||    
T  11453922 aatcacaaagaaaaaacctagatctatgtgaaaaccacttatttagattgaaatagagagagaaaaagatgaaga--gagtgatttcaagtcaaaaattg 11453825  T
Q  99 acccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagag 147  Q
    |||  |||||  || |||||||||| |||| |||| |||||||||||||    
T  11453824 accagaaaccatccctcaatgaagaaactgaaagagaaaacctagagag 11453776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 7997763 - 7997667
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacc 108  Q
    |||||||||| || | ||||||||||||||||||| |||||| || |||||||||||||||||  |||| ||||| ||| |||| || ||||||||||    
T  7997763 aaaaaacctagatctatgtgaaaatcacttatttatattgaaataaagagaaaaagatgaaga-agggtgatttcagatcaaaaattaacccaaaacc 7997667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 34519119 - 34519054
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaag 66  Q
    ||||| || ||||||||||| || | |||||||||||||||||||||||||| |||||||||||||    
T  34519119 aatcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaag 34519054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 147
Target Start/End: Original strand, 45426183 - 45426303
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacc-ccccttcaatgaagaca 125  Q
    ||||||||||||||||||||||| || |||||||||||||||||| |   ||| |||||  || || | ||||||||||||| |||| |||||||||| |    
T  45426183 tgtgaaaatcacttatttagatttaaatagagagaaaaagatgaa-aataggtgatttcaaatcaagaattgacccaaaaccaccccctcaatgaagaaa 45426281  T
Q  126 ctgtaagaaaaaacctagagag 147  Q
    ||| || | |||||||||||||    
T  45426282 ctggaaaagaaaacctagagag 45426303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 45805925 - 45806069
Alignment:
Q  22 atttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacc-ccccttcaatga 120  Q
    |||| ||||||| |||||||||||||||||| |||||||||||||| |||||   ||| ||||| ||| |||| ||||||||||||| ||||  |||| |    
T  45805925 atttatgtgaaagtcacttatttagattgaaatagagagaaaaagaggaaga-aaggtgatttcagatcaaaaattgacccaaaaccacccccccaataa 45806023  T
Q  121 agacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    ||| || | |||| |||| |||||||| ||||| |||  |||||||    
T  45806024 agaaacgggaagagaaaatctagagagagaaaattaggaccgactt 45806069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 9172464 - 9172353
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||||||| |||||||||||||||||| |||||| ||||| ||||||| ||||| ||||| | | || | ||||||||||||| |    
T  9172464 aaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagaaaaaaatatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccac 9172366  T
Q  111 ccttcaatgaaga 123  Q
    ||  |||||||||    
T  9172365 cccccaatgaaga 9172353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 9180446 - 9180335
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||||||| |||||||||||||||||| |||||| ||||| ||||||| ||||| ||||| | | || | ||||||||||||| |    
T  9180446 aaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagaaaaaaatatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccac 9180348  T
Q  111 ccttcaatgaaga 123  Q
    ||  |||||||||    
T  9180347 cccccaatgaaga 9180335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 19723309 - 19723176
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagag-aaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccc 109  Q
    |||||||||| || | |||||||||||||||||||||||||| ||||||| ||||| ||||||| | ||| |||||   | || | |||||||||||||     
T  19723309 aaaaaacctagatctatgtgaaaatcacttatttagattgaa-tagagagaaaaaatatgaaga-gaggtgatttcaagtcaataattgacccaaaacca 19723212  T
Q  110 cccttcaatgaagacactgtaagaaaaaacctagaga 146  Q
    ||| |||||||||| ||| ||||| ||||||||||||    
T  19723211 ccc-tcaatgaagaaactataagagaaaacctagaga 19723176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 138
Target Start/End: Complemental strand, 20266262 - 20266151
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacc-ccccttcaatgaagaca 125  Q
    |||||||||||||||||||||||||| || |||||||||||||||||  |||| ||||  ||| || | ||||||||||||| |||| || ||||||| |    
T  20266262 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-tgggtgattttagatcaagaattgacccaaaaccaccccctcgatgaagaaa 20266164  T
Q  126 ctgtaagaaaaaa 138  Q
     ||||||| ||||    
T  20266163 ttgtaagagaaaa 20266151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 27872725 - 27872653
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||| | |||||||| || || | |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  27872725 aatcacgaagaaaaaacttagatctatgtgaaaatcacttatttagattgaaatagagcgaaaaagatgaaga 27872653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 30879035 - 30878924
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    ||||||||||||||||||||||| || || ||||||||||||||||| | | | || || | | |||| ||||||||||||| ||| |||||||||| |     
T  30879035 tgtgaaaatcacttatttagattaaaataaagagaaaaagatgaaga-gagatgatctcaggtcaaaaattgacccaaaaccacccctcaatgaagaaat 30878937  T
Q  127 tgtaagaaaaaac 139  Q
    ||||||| |||||    
T  30878936 tgtaagagaaaac 30878924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 39987346 - 39987303
Alignment:
Q  31 aaaatcacttatttagattgaattagagagaaaaagatgaagag 74  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  39987346 aaaatcacttatttagattgaatcagagagaaaaagatgaagag 39987303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 7312193 - 7312329
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||| | ||||||||||| || |  |||||||||| |||||||  ||||| |||||||||||||||||||||  | ||||||  | | |||| |||||    
T  7312193 aatcacgaagaaaaaacctagatctacgtgaaaatcatttatttaatttgaaatagagagaaaaagatgaagagaag-taattttaggtcaaaaattgac 7312291  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaa 138  Q
    |||||||  ||| |||||||||| |||| || ||||||    
T  7312292 ccaaaactacccctcaatgaagaaactggaaaaaaaaa 7312329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 18649987 - 18650044
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagat 68  Q
    ||||||||||||||| ||||||||| |||||||||||| ||| ||||||| |||||||    
T  18649987 aaaaaacctatatttatgtgaaaattacttatttagatcgaaatagagaggaaaagat 18650044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 9687318 - 9687356
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagatt 49  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  9687318 aaaaaacctatatctatgtgaaaatcacttatttagatt 9687356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 30558750 - 30558823
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagg 75  Q
    ||||| || ||||||||||| || | ||||||| |||||| ||||||||||| |||| ||||||| |||||||||    
T  30558750 aatcataaagaaaaaacctagatctgtgtgaaa-tcacttttttagattgaaatagaaagaaaaatatgaagagg 30558823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 5156029 - 5155985
Alignment:
Q  29 tgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    ||||||||||||||||| ||| ||| |||||||| ||||||||||    
T  5156029 tgaaaatcacttatttacattaaatgagagagaagaagatgaaga 5155985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 6e-33; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 9498707 - 9498860
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| || ||| ||||||||||||| ||||| ||||| | ||| || ||||||||||||| |    
T  9498707 aaaaaacctaaatctatgtgaaaatcacttatttagattgaaataaagataaaaagatgaaga-ggggtgatttcaggtaagaa-ttgacccaaaaccac 9498804  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    || |||||||||| | ||||||| ||||||||||||| ||||||||| ||||||||    
T  9498805 ccctcaatgaagaaattgtaagagaaaacctagagagagaaaactagggccgactt 9498860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 162
Target Start/End: Original strand, 9619479 - 9619613
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    |||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| | | || | ||||||||||||| ||| |||||||||| |     
T  9619479 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaat 9619577  T
Q  127 tgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    ||||||| |||| |||||||| ||||||||||||||    
T  9619578 tgtaagagaaaatctagagagagaaaactagagccg 9619613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 166
Target Start/End: Original strand, 43890250 - 43890384
Alignment:
Q  31 aaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacactgta 130  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| | | ||||  ||| |||||||| ||| |||||||||| | ||||    
T  43890250 aaaatcacttatttagattgaattaaagagaaaaagatgaaga-ggggtgatttcaggtcaaaaaatgatccaaaaccacccctcaatgaagaaattgta 43890348  T
Q  131 agaaaaaacctagagagtgaaaactagagccgactt 166  Q
    ||| ||||||||||||| ||||||||| ||||||||    
T  43890349 agagaaaacctagagagagaaaactagggccgactt 43890384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 33342427 - 33342281
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaa-tcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttga 99  Q
    |||||| | ||||||||||| || | |||||||| ||||||||||||||||||||||||| |||| |||||||| ||||| ||||| | | |||| ||||    
T  33342427 aatcacgaagaaaaaacctagatctatgtgaaaaatcacttatttagattgaattagagaaaaaaggatgaaga-ggggtgatttcaggttaaaaattga 33342329  T
Q  100 cccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagag 147  Q
    ||||||||| ||| |||||||||| |||  ||||||||||||||||||    
T  33342328 cccaaaaccacccctcaatgaagaaactcgaagaaaaaacctagagag 33342281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 11725671 - 11725511
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    ||||| || ||||||||||| || | |||||||| ||||||||||||||||| || ||||||||||| ||||| ||||| ||||| | | || | |||||    
T  11725671 aatcaaaaagaaaaaacctagatctatgtgaaaaacacttatttagattgaaataaagagaaaaagacgaaga-ggggtgatttcaggtcaagaattgac 11725573  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    |||||||| ||| |||||||||| |||| |||| |||| |||||||| ||||||||| ||||    
T  11725572 ccaaaaccacccctcaatgaagaaactgaaagagaaaatctagagagagaaaactagggccg 11725511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 32 - 163
Target Start/End: Original strand, 42448154 - 42448284
Alignment:
Q  32 aaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacactgtaa 131  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||| ||||| | | || | || |||||||||| ||| |||||||  | |||||||    
T  42448154 aaatcacttatttagattgaaatagagagaaaaagatgaaga-ggggtgatttcaggtcaagaattaacccaaaaccacccctcaatgacaaaactgtaa 42448252  T
Q  132 gaaaaaacctagagagtgaaaactagagccga 163  Q
    || ||||||||||||| ||||||||| |||||    
T  42448253 gacaaaacctagagagagaaaactagggccga 42448284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 17949210 - 17949082
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    |||||||||| ||||||||||||||| ||||||||||||| |||||| ||||| ||||| | | || | ||||||||||| | ||| |||||||||| ||    
T  17949210 tgtgaaaatcgcttatttagattgaaatagagagaaaaaggtgaaga-ggggtgatttcaggtcaataattgacccaaaatcacccatcaatgaagaaac 17949112  T
Q  127 tgtaagaaaaaacctagagagtgaaaacta 156  Q
    ||||||| | ||||||||||| ||||||||    
T  17949111 tgtaagagacaacctagagagagaaaacta 17949082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 44100027 - 44100187
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||||| |||||||| || || | ||||||||| |||||||||||||||| || ||||||||||||||||| ||||| ||||  | | || | | |||    
T  44100027 aatcacaaagaaaaaacttagatctatgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga-ggggtgattttaggtcaagaatcgac 44100125  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    |||||||| ||| |||||||||| || | |||| ||||||||||||| ||||||||| ||||    
T  44100126 ccaaaaccacccctcaatgaagaaaccgaaagagaaaacctagagagagaaaactagggccg 44100187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 147
Target Start/End: Complemental strand, 44578015 - 44577880
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||| |||||||||| |||||||||| |||||||||||||||||||||| | | ||||  | | |||| ||||||||||||| |    
T  44578015 aaaaaacctagatctatgtgtaaatcacttagttagattgaaatagagagaaaaagatgaagaggag-tgattttaggtcaaaaattgacccaaaaccac 44577917  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagag 147  Q
    || |||||||||| || |||||| |||||||||||||    
T  44577916 ccctcaatgaagaaacagtaagagaaaacctagagag 44577880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 14907045 - 14907174
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    |||||||||||||||||||||||||| || |||||||||||||||||  |||| ||||| | | || | |||| |||||| |  || |||||||||| |     
T  14907045 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-tgggtgatttcaggtcaagaattgatccaaaatcatccctcaatgaagaaat 14907143  T
Q  127 tgtaagaaaaaacctagagagtgaaaactag 157  Q
    ||||||| ||||||||||||| |||||||||    
T  14907144 tgtaagagaaaacctagagagagaaaactag 14907174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 35580447 - 35580282
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||| | ||||||||||| || | ||||||||||||||||||| |||||| ||||||||||||||||||||  | || ||||    | |||| |||||    
T  35580447 aatcacgaagaaaaaacctagatctatgtgaaaatcacttatttaaattgaaatagagagaaaaagatgaaga-tgagtgattttatgtcaaaaattgac 35580349  T
Q  101 ccaaaacccccct-tcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    |||||||| |||| |||||||||| | || ||||||||||||| ||||  |||| ||| ||||||||    
T  35580348 ccaaaaccaccctctcaatgaagaaattggaagaaaaaacctaaagagaaaaaattagggccgactt 35580282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 27 - 166
Target Start/End: Original strand, 32724610 - 32724749
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgat-aaaaatttgacccaaaacc-ccccttcaatgaagac 124  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||| |  || ||||| | | || |||||||||||||||| |||| |||||| |||     
T  32724610 tgtgaaaatcacttatttagattgaaatagagag-aaaagatgaaga-gaagtgatttcaggtcaataatttgacccaaaaccaccccctcaatggagaa 32724707  T
Q  125 actgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    ||||||||| |||||| |||||| ||||||||| | ||||||    
T  32724708 actgtaagagaaaacccagagagagaaaactagggtcgactt 32724749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 4808927 - 4808816
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    ||||||||||||||||||| |||||| || ||| ||||||||||||| ||||||||||| | | || | ||||||||||||| ||| |||||||||| |     
T  4808927 tgtgaaaatcacttatttacattgaaataaagaaaaaaagatgaaga-ggggtaatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaat 4808829  T
Q  127 tgtaagaaaaaac 139  Q
    ||||||| |||||    
T  4808828 tgtaagagaaaac 4808816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 16794272 - 16794210
Alignment:
Q  12 aaaaacctatatttttgtgaaaa-tcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    ||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  16794272 aaaaacctagatttatgtgaaaaatcacttatttagattgaattagagagaaaaagatgaaga 16794210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 11196879 - 11196726
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    ||||| || ||||||||||| || | ||||||||||||||||||||||||||  | |||||||||||||||||  || | ||||| | | || | |||||    
T  11196879 aatcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaa--atagagaaaaagatgaaga-tggatgatttcaggtcaagaattgac 11196783  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactag 157  Q
    |||||||| ||| |||| ||||| |||  |||| |||| |||||||| |||||||||    
T  11196782 ccaaaaccacccctcaacgaagaaactagaagagaaaaactagagagagaaaactag 11196726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 147
Target Start/End: Complemental strand, 28239792 - 28239676
Alignment:
Q  31 aaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaa-ccccccttcaatgaagacactgt 129  Q
    |||| ||||||||||||||||| |||||||||||||||||||| | ||| ||||| | | |||| ||||||||||| | |||| |||||||||| | ||     
T  28239792 aaaaacacttatttagattgaaatagagagaaaaagatgaaga-gaggtgatttcaggtcaaaaattgacccaaaatcaccccctcaatgaagaaaatgg 28239694  T
Q  130 aagaaaaaacctagagag 147  Q
    |||| |||||||||||||    
T  28239693 aagagaaaacctagagag 28239676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 9072696 - 9072585
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||| ||| |||| ||||||| ||||||||||| |||||| |||||||||||||||||||| ||||| |||||   | |||| ||||||||||||| |    
T  9072696 aaaaaatctagatttatgtgaaagtcacttatttaaattgaaatagagagaaaaagatgaaga-ggggtgatttcaagtcaaaaattgacccaaaaccac 9072598  T
Q  111 ccttcaatgaaga 123  Q
    ||  |||||||||    
T  9072597 cccccaatgaaga 9072585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 143
Target Start/End: Complemental strand, 34611783 - 34611652
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| |||| ||||||||||||||||||||| |||| |||| ||||||| |||||||  | || ||||| | | || | ||||||||||||| |    
T  34611783 aaaaaacctagatttatgtgaaaatcacttatttagactgaaatagaaagaaaaatatgaaga-tgagtgatttcaggtcaagaattgacccaaaaccac 34611685  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctag 143  Q
    || || ||||||| ||||||||| |||| ||||    
T  34611684 ccctcgatgaagaaactgtaagagaaaaactag 34611652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 162
Target Start/End: Complemental strand, 33896060 - 33895911
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||||||| ||||||||||||||| || ||||||||||||||||||||||||  | |||  ||| || | ||||||||||||| |    
T  33896060 aaaaaacctagatctatgtgaaagtcacttatttagatttaaatagagagaaaaagatgaagaggggtgacttta-gatcaagaattgacccaaaaccac 33895962  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    ||  ||||||||| ||   |||| ||||||||||||| ||||| ||| ||||    
T  33895961 ccc-caatgaagaaacgcgaagagaaaacctagagagagaaaattagggccg 33895911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 19876201 - 19876085
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||||| ||||||||||  || | |||||||||||||||||||||||||| ||  ||||||||||||||||  | |||||||| | | || | |||||    
T  19876201 aatcacaaagaaaaaaccttgatctatgtgaaaatcacttatttagattgaaatattgagaaaaagatgaaga-tgagtaatttcaggtcaagaattgac 19876103  T
Q  101 ccaaaaccccccttcaat 118  Q
    |||||||| ||| |||||    
T  19876102 ccaaaaccacccctcaat 19876085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 143
Target Start/End: Complemental strand, 2655832 - 2655717
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    |||||||||||||||||||||||||| || |||||||||||||||||  |||| ||| | | | || | ||||||||||||| ||  |||||||||| |     
T  2655832 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-tgggtgattgcaggtcaagaattgacccaaaaccaccgctcaatgaagaaat 2655734  T
Q  127 tgtaagaaaaaacctag 143  Q
    ||||||| |||| ||||    
T  2655733 tgtaagagaaaaactag 2655717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 157
Target Start/End: Original strand, 15597270 - 15597417
Alignment:
Q  10 gaaaaaacctatatttttgtgaaaatcacttatttagattgaattaga-gagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacc 108  Q
    ||||||||||| || | |||||||||||||||||||||||||| | ||  ||||||||||||||| ||||| ||||| | | |||| |||||  ||||||    
T  15597270 gaaaaaacctagatctatgtgaaaatcacttatttagattgaaatggactagaaaaagatgaaga-ggggtgatttcaggtcaaaaattgactgaaaacc 15597368  T
Q  109 ccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactag 157  Q
     ||| ||||| || | |||| |||| |||||||| ||||  ||||||||    
T  15597369 acccctcaataaaaatactggaagagaaaacctatagagaaaaaactag 15597417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 27747207 - 27747279
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||| | |||||||| ||||||| ||||||||| ||||||||| |||||| | |||| |||||||||||||    
T  27747207 aatcacgaagaaaaaacttatatttatgtgaaaattacttatttaaattgaaatggagataaaaagatgaaga 27747279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 166
Target Start/End: Complemental strand, 29777181 - 29777054
Alignment:
Q  38 cttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacactgtaagaaaaa 137  Q
    ||||||||||||||| |||||||||||||||||||| || || |||||   | || | ||||||||||||| | |  ||||||||| || | | || |||    
T  29777181 cttatttagattgaaatagagagaaaaagatgaaga-ggagtgatttcatgtcaataattgacccaaaaccactcaccaatgaagaaacaggatgagaaa 29777083  T
Q  138 acctagagagtgaaaactagagccgactt 166  Q
    |||||||||| ||||| ||| ||||||||    
T  29777082 acctagagagagaaaattagggccgactt 29777054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 25241705 - 25241767
Alignment:
Q  9 ggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaa 71  Q
    |||||||| ||| |||| ||||| ||||||||||| |||||||| |||| |||||||||||||    
T  25241705 ggaaaaaatctaaatttatgtgacaatcacttattgagattgaaatagaaagaaaaagatgaa 25241767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 33298833 - 33298787
Alignment:
Q  13 aaaacctatatttttgtgaaaatcacttatttagattgaattagaga 59  Q
    |||||||| || | |||||||||||||||||||||||||||||||||    
T  33298833 aaaacctagatctatgtgaaaatcacttatttagattgaattagaga 33298787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 43192440 - 43192503
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaa 64  Q
    |||||| | ||||||||||| || | ||| |||| ||||||||||||||||| |||||||||||    
T  43192440 aatcacgaagaaaaaacctagatctatgtaaaaaccacttatttagattgaaatagagagaaaa 43192503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 18733980 - 18733938
Alignment:
Q  31 aaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||    
T  18733980 aaaatcaattatttaaattgaaatagagagaaaaagatgaaga 18733938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 37565984 - 37566038
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaa 65  Q
    |||||||||| || | ||||||||||| |||||||||||||| |||||| |||||    
T  37565984 aaaaaacctaaatctatgtgaaaatcaattatttagattgaaatagagataaaaa 37566038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 17427322 - 17427382
Alignment:
Q  10 gaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatga 70  Q
    ||||||||||| || | | |||||| |||||||||| | |||| |||||||||||||||||    
T  17427322 gaaaaaacctagatctatttgaaaagcacttatttacactgaaatagagagaaaaagatga 17427382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 17430972 - 17431032
Alignment:
Q  10 gaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatga 70  Q
    ||||||||||| || | | |||||| ||||||||||||||||  |||||||| ||||||||    
T  17430972 gaaaaaacctagatctatctgaaaagcacttatttagattgacatagagagagaaagatga 17431032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 6e-33; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 11 - 166
Target Start/End: Complemental strand, 30371699 - 30371545
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| | | |||  ||||||||||||| |    
T  30371699 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-ggggtgatttcaggtcaaatattgacccaaaaccac 30371601  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    || |||||||||| | ||||||| |||||||||| || ||||||||| ||||||||    
T  30371600 ccctcaatgaagaaattgtaagagaaaacctagatagagaaaactagggccgactt 30371545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 27266965 - 27267119
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||||| | | || | ||||||||||||| |    
T  27266965 aaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaatatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccac 27267063  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    |||||  |||||| || | |||| ||||||||||||| ||||||||| ||||||||    
T  27267064 ccttcggtgaagaaacgggaagagaaaacctagagagagaaaactagggccgactt 27267119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 19281039 - 19281203
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||||| ||||||||||| || | ||||||| |||||||||||||||||| ||||||||||||||||||||  |||| ||||||| | |||| || ||    
T  19281039 aatcacaaagaaaaaacctagatatgtgtgaaagtcacttatttagattgaaatagagagaaaaagatgaaga-tgggtgatttccggtcaaaaatttac 19281137  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    |||||||| |||  ||||||||| || | | || ||||||||||||| ||||| ||| ||||||||    
T  19281138 ccaaaaccaccccccaatgaagaaacgggatgagaaaacctagagagagaaaattagggccgactt 19281203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 18677571 - 18677704
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||||||||||||||||||||||| || |||||||||||||||||||| ||| | ||||| ||| || | ||||||||||||| |    
T  18677571 aaaaaacctagatctatgtgaaaatcacttatttagattaaaatagagagaaaaagatgaaga-gggatgatttcagatcaataattgacccaaaaccac 18677669  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagag 145  Q
    || |||||||||| || |||| | |||||||||||    
T  18677670 ccctcaatgaagaaacggtaaaagaaaacctagag 18677704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 166
Target Start/End: Complemental strand, 34881685 - 34881531
Alignment:
Q  10 gaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccc 109  Q
    ||||||| ||| || | |||||||||||||||||||||||||| ||||||| |||||||||||| | ||| ||||| | | || | |||||||| ||||     
T  34881685 gaaaaaaactagatctatgtgaaaatcacttatttagattgaaatagagag-aaaagatgaaga-gaggtgatttcaggtcaagaattgacccagaacca 34881588  T
Q  110 cccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    ||| |||||| ||| ||||||||| ||||||| ||||| ||||||||| ||||||||    
T  34881587 cccctcaatggagaaactgtaagagaaaacctggagagagaaaactagggccgactt 34881531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 162
Target Start/End: Complemental strand, 7241757 - 7241607
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||||||| |||||||||||||||||| |||||||||||||||||||||||| |  |||| | | || | ||||||||||||| |    
T  7241757 aaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagagggg-tggtttcaggttaagaattgacccaaaaccac 7241659  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    ||  ||||||||| || | |||| ||||||||||||| ||||| ||| ||||    
T  7241658 cccccaatgaagaaacgggaagagaaaacctagagagagaaaattagggccg 7241607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 162
Target Start/End: Complemental strand, 7246933 - 7246783
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||||||| |||||||||||||||||| |||||||||||||||||||||||| |  |||| | | || | ||||||||||||| |    
T  7246933 aaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagagggg-tggtttcaggttaagaattgacccaaaaccac 7246835  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    ||  ||||||||| || | |||| ||||||||||||| ||||| ||| ||||    
T  7246834 cccccaatgaagaaacgggaagagaaaacctagagagagaaaattagggccg 7246783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 10 - 157
Target Start/End: Original strand, 21060385 - 21060531
Alignment:
Q  10 gaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccc 109  Q
    ||||||||||| || | |||||||||||||||||||||||||| || ||||||||||||||||| | ||| ||||| ||| || | |||||||||||||     
T  21060385 gaaaaaacctacatctatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaaga-gtggtgatttcagatcaagaattgacccaaaacca 21060483  T
Q  110 cccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactag 157  Q
    ||  || ||||| |  ||  |||| ||||||||||||| |||||||||    
T  21060484 ccactcgatgaaaaatctagaagagaaaacctagagagagaaaactag 21060531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 10649428 - 10649316
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| | | || | ||||||||||| | |    
T  10649428 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-ggggtgatttcaggtcaagaattgacccaaaatcac 10649330  T
Q  111 ccttcaatgaagac 124  Q
    || |||||||||||    
T  10649329 ccctcaatgaagac 10649316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 28235570 - 28235427
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||||| ||||||| ||| || | |||||||||||||||||||||| ||| |||| ||||||||||||||||||| | ||||| | | ||   |||||    
T  28235570 aatcacaaagaaaaaatctagatctatgtgaaaatcacttatttagatcgaaatagaaagaaaaagatgaagagggg-tgatttcaggtcaatgattgac 28235472  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagag 145  Q
    |||||||| ||| ||||| |||| |||| |||| |||| ||||||    
T  28235471 ccaaaaccacccctcaataaagaaactggaagagaaaatctagag 28235427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 42579855 - 42579707
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaaga---tgaagagggggtaatttccgataaaaatttgacccaaaac 107  Q
    |||||||||| || | |||||||||||||||||||||||||| |||| ||||||| |   |||| ||||| | |||||   | || | ||||||||||||    
T  42579855 aaaaaacctaaatctatgtgaaaatcacttatttagattgaaatagaaagaaaaaaaaaatgaaaagggg-tgatttcatgtcaataattgacccaaaac 42579757  T
Q  108 cccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactag 157  Q
    | ||| |||||| ||| ||||||||| ||||||||||||| |||||||||    
T  42579756 cacccctcaatggagaaactgtaagagaaaacctagagagagaaaactag 42579707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 2057943 - 2058009
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggg 77  Q
    |||||||||| || | |||||||||||||||||||||||||| || |||||||||||||||||||||    
T  2057943 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagggg 2058009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 7150456 - 7150585
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||| | ||||| | | |||| || | ||||||||  ||   |||||||| ||    
T  7150456 tgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagagggg-tgatttcaggtcaaaaattaatccaaaaccatccccgaatgaagaaac 7150554  T
Q  127 tgtaagaaaaaacctagagagtgaaaactag 157  Q
     | |||| ||||||||||||| |||||||||    
T  7150555 gggaagagaaaacctagagagagaaaactag 7150585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 16981275 - 16981201
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagg 75  Q
    |||||||| ||||||||||| || | |||| ||||||||||||||||||||| |||||||||||| |||||||||    
T  16981275 aatcacaaagaaaaaacctagatatatgtgtaaatcacttatttagattgaaatagagagaaaaatatgaagagg 16981201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 26578224 - 26578162
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||||| || | |||||||||||||||||||||||||| || |||||||||||||||||    
T  26578224 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga 26578162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 7887032 - 7887192
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    ||||| || |||||||| || |||| ||||||||||||||||||||||| || ||||||| |||||| ||||| ||| | ||||| | | || | | |||    
T  7887032 aatcaaaaagaaaaaacatagatttatgtgaaaatcacttatttagattaaaatagagaggaaaagacgaaga-gggatgatttcaggtcaagaatggac 7887130  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    |||||||| ||| || ||||||| |||| |||| ||||  |||| || ||||||||| ||||    
T  7887131 ccaaaaccacccctcgatgaagaaactggaagagaaaagttagaaagagaaaactagggccg 7887192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 36344584 - 36344748
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||||| |||||||| || ||   ||||||||| |||||||||||||||| || ||||||||||||||||| ||||| ||||  | | || | | |||    
T  36344584 aatcacaaagaaaaaacttagatccatgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga-ggggtgattttaggtcaagaatcgac 36344682  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
     ||||||| ||| |||||||||| | || |||| |||| ||||||||  |||| ||| ||||||||    
T  36344683 tcaaaaccacccctcaatgaagaaattggaagagaaaatctagagagaaaaaattagggccgactt 36344748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 781374 - 781302
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||| |||||| |||| || | | |||||||||||||||||||||||| || |||||||||||||||||    
T  781374 aatcacaaagaaaaaccctagatctatctgaaaatcacttatttagattgaaatatagagaaaaagatgaaga 781302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 15570895 - 15570819
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaa-tcacttatttagattgaattagagagaaaaagatgaagaggg 76  Q
    |||||||| ||||||||||| || | |||||||| |||  |||||||||||||||| ||||||||||||||||||||    
T  15570895 aatcacaaagaaaaaacctacatctatgtgaaaaatcaaatatttagattgaattatagagaaaaagatgaagaggg 15570819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 20257799 - 20257855
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaaga 67  Q
    |||||||||| || | |||||||||||||||||||||||||| ||||||||||||||    
T  20257799 aaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaaga 20257855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 43261924 - 43261984
Alignment:
Q  13 aaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||| || | |||||||||||||||||||||||||| |||||| |||||||||||||    
T  43261924 aaaacctagatctatgtgaaaatcacttatttagattgaaatagagataaaaagatgaaga 43261984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 35475431 - 35475504
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagag 74  Q
    |||||||| ||||||| ||| || | |||||||||||||||||||||||||| || ||| || |||||||||||    
T  35475431 aatcacaaagaaaaaatctagatctatgtgaaaatcacttatttagattgaaatatagataacaagatgaagag 35475504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 27576444 - 27576516
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||| ||||||| ||| || | |||||| |||||||||||| |||||| ||||||||||| ||||||||    
T  27576444 aatcacaaagaaaaaatctagatctatgtgaatatcacttatttacattgaaatagagagaaaaggatgaaga 27576516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 147
Target Start/End: Original strand, 19259938 - 19260050
Alignment:
Q  31 aaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacactgta 130  Q
    |||||||||||||||||||||| |||||||||||||    |   ||||| ||||| | | || | ||||||||||||| ||| |||| ||||| || |||    
T  19259938 aaaatcacttatttagattgaaatagagagaaaaag----aattggggtgatttcaggtcaagaattgacccaaaaccacccctcaacgaagaaaccgta 19260033  T
Q  131 agaaaaaacctagagag 147  Q
    ||| |||||||||||||    
T  19260034 agagaaaacctagagag 19260050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 30298193 - 30298130
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaa 64  Q
    ||||| || ||||||||||| || | |||||||||||||||||||||||||| || ||||||||    
T  30298193 aatcataaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatatagagaaaa 30298130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 11767762 - 11767720
Alignment:
Q  31 aaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||||||||||||||||| || |||||||||||||||||    
T  11767762 aaaatcacttatttagattgaaatatagagaaaaagatgaaga 11767720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 164
Target Start/End: Original strand, 3271529 - 3271663
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    ||||||||||||||||||||||||||  |||||| |||||||||||| || || |||||   | || | |||||| |||| | ||| |||||||||| ||    
T  3271529 tgtgaaaatcacttatttagattgaaacagagag-aaaagatgaaga-ggagtgatttcatgtcaagaattgacctaaaatcaccc-tcaatgaagaaac 3271625  T
Q  127 tgtaagaaaaaacctagagagtgaaaactagagccgac 164  Q
    | ||||||||||  ||||||| ||||| ||| ||||||    
T  3271626 tataagaaaaaatttagagagagaaaattagggccgac 3271663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42432885 - 42432812
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagag 74  Q
    |||||||| ||||||||||| || | | ||||| |||||| ||||||||||| |||||||||||| || |||||    
T  42432885 aatcacaaagaaaaaacctaaatctatatgaaattcacttttttagattgaaatagagagaaaaatataaagag 42432812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 42886453 - 42886392
Alignment:
Q  12 aaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    ||||||||| || | |||||||| ||||||||| ||||||| ||||||||||| ||||||||    
T  42886453 aaaaacctaaatctatgtgaaaagcacttattttgattgaaatagagagaaaaggatgaaga 42886392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 27751911 - 27751860
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaa 52  Q
    |||||||| ||||||||||| || | ||||||||||||||||||| ||||||    
T  27751911 aatcacaaagaaaaaacctagatctatgtgaaaatcacttatttatattgaa 27751860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 14211160 - 14211110
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggg 77  Q
    ||||||||||||||||||||||||||  | || |||||||||| |||||||    
T  14211160 tgtgaaaatcacttatttagattgaaagaaagggaaaaagatgcagagggg 14211110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 1582243 - 1582288
Alignment:
Q  28 gtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||||||||||||||||| || | |||||||||| |||||||    
T  1582243 gtgaaaatcacttatttagattaaaatggagagaaaaatatgaaga 1582288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 1602572 - 1602527
Alignment:
Q  28 gtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||||||||||||||||| || | |||||||||| |||||||    
T  1602572 gtgaaaatcacttatttagattaaaatggagagaaaaatatgaaga 1602527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6445921 - 6445849
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||| | ||||||||||| || | ||| ||||||||||||||| ||| |  ||||||||||| ||||||||    
T  6445921 aatcacgaagaaaaaacctagatctatgtaaaaatcacttatttaaattaagatagagagaaaacgatgaaga 6445849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 43148689 - 43148645
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaa 71  Q
    ||||||| |||||||||||||| ||| ||||||||||| ||||||    
T  43148689 tgtgaaagtcacttatttagatcgaaatagagagaaaaggatgaa 43148645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 6e-33; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 11 - 166
Target Start/End: Complemental strand, 4178534 - 4178380
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||| ||| |||| | |||||||||||||||||||||||| |||||||||||||||||||| ||| | ||||  | | || | ||||||||||||| |    
T  4178534 aaaaaagctagatttatctgaaaatcacttatttagattgaaatagagagaaaaagatgaagatggg-tgattttaggtcaagaattgacccaaaaccac 4178436  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    || |||||||||| || |||||||||||||||||||| ||||||||| ||||||||    
T  4178435 ccctcaatgaagaaacagtaagaaaaaacctagagagagaaaactagggccgactt 4178380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 166
Target Start/End: Complemental strand, 4172536 - 4172382
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| |||||||||||||||||||| ||   | |||  | ||| || ||||||||||||| |    
T  4172536 aaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatggatgattttatgttaagaa-ttgacccaaaaccac 4172438  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    || |||||||||| || ||||||||||| |||||||| ||||||||| ||||||||    
T  4172437 ccctcaatgaagaaacagtaagaaaaaatctagagagagaaaactagggccgactt 4172382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 39917491 - 39917645
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||| |||||||  || | ||||| | | || | |||||    
T  39917491 aatcacaaggaaaaaacctagatctatgtgaaaatcacttatttagattgaattagagagaaaaatatgaaga-tggatgatttcaggtcaagaattgac 39917589  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaacta 156  Q
    |||||||| | | ||| |||||| ||||||||  ||||||||||||| ||||||||    
T  39917590 ccaaaaccactcctcagtgaagaaactgtaagggaaaacctagagagagaaaacta 39917645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 35499306 - 35499418
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| | |||||| |||||| |||||| |    
T  35499306 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagggggtgatttcaggtaaaaaattgaccaaaaaccac 35499405  T
Q  111 ccttcaatgaaga 123  Q
    || ||||||||||    
T  35499406 ccctcaatgaaga 35499418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 166
Target Start/End: Complemental strand, 12116063 - 12115909
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || |||||||||||||||||||||||||||| || |||| |||||||||||| | | | ||||| | | || | ||||| ||||||| |    
T  12116063 aaaaaacctagatctttgtgaaaatcacttatttagattgaaataaagaggaaaagatgaaga-gagatgatttcaggtcaagaattgactcaaaaccac 12115965  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    || |||||||||| | ||||| | ||||||||||||| ||||||||||||||||||    
T  12115964 ccctcaatgaagaaattgtaaaagaaaacctagagagagaaaactagagccgactt 12115909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 162
Target Start/End: Complemental strand, 25162405 - 25162256
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||||||| |||||||||||||||||| |||||||||||||||||||| ||| | |||||  || || | ||||| ||||||| |    
T  25162405 aaaaaacctagatctatgtgaaa-tcacttatttagattgaaatagagagaaaaagatgaagatggg-tgatttcaaatcaagaattgacacaaaaccac 25162308  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    || ||| |||||| ||||||||| ||||||||||||| ||||||||||||||    
T  25162307 ccctcagtgaagaaactgtaagagaaaacctagagagagaaaactagagccg 25162256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 25631632 - 25631777
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| |||||||||||||||| ||||||  | ||||  | | |||| ||||||||||||| |    
T  25631632 aaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatggagaggga-tgattttaggtcaaaaattgacccaaaaccac 25631730  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactag 157  Q
    || |||||||||| |  |||||| ||||||||||||| |||||||||    
T  25631731 ccctcaatgaagaaatagtaagagaaaacctagagagagaaaactag 25631777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 166
Target Start/End: Complemental strand, 46934613 - 46934458
Alignment:
Q  10 gaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccc 109  Q
    ||||||||||  || | |||||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||| | | |||| |||||| ||||||     
T  46934613 gaaaaaacctggatctatgtgaaaatcacttatttagattgaaatagagagagaaagatgaaga-ggggtgatttcaggtcaaaaattgaccaaaaacca 46934515  T
Q  110 cccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    ||| |||||||||| | |  |||| ||||||||||||| ||||| ||| ||||||||    
T  46934514 cccctcaatgaagaaagtagaagagaaaacctagagagagaaaattagggccgactt 46934458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 166
Target Start/End: Complemental strand, 36906091 - 36905937
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||||||||||||||||||| |||||| || |||||||||||||||||  |||| ||||| | | || | |||||||||||||      
T  36906091 aaaaaacctaaatctatgtgaaaatcacttatttatattgaaataaagagaaaaagatgaaga-agggtgatttcaggtcaagaattgacccaaaaccat 36905993  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    || |||||||||| | ||||||| ||||||||||||| ||||| ||| ||||||||    
T  36905992 ccatcaatgaagaaattgtaagagaaaacctagagagagaaaattagggccgactt 36905937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 44907504 - 44907649
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||||| | | || | ||||||||||||| |    
T  44907504 aaaaaacctagatctatgtgaaaatcacttgtttagattgaaataaagagaaaaagatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccac 44907602  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactag 157  Q
    || |||| ||||| | |||| || ||||||||||||| |||||||||    
T  44907603 ccctcaaagaagaaattgtaggagaaaacctagagagagaaaactag 44907649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 162
Target Start/End: Complemental strand, 32607437 - 32607287
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacc-c 109  Q
    |||||||||| || | |||||||||||||||||||||||||| || |||||||| ||||||||||||   ||||| | | || | ||||||||||||| |    
T  32607437 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaatgatgaagagggg--tatttcaggtcaagaattgacccaaaaccac 32607340  T
Q  110 cccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    ||| |||||||||| | ||||||| |||| |||||||| ||||||||| ||||    
T  32607339 cccctcaatgaagaaattgtaagagaaaatctagagagagaaaactagggccg 32607287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 38855158 - 38855286
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||  | |||| |  || ||  |||||||||||| ||| |||||||||| |     
T  38855158 tgtgaaaatcacttatttagattgatatagagagaaaaagatgaagaggggtgattttcggtcaagaa--tgacccaaaaccacccctcaatgaagaaat 38855255  T
Q  127 tgtaagaaaaaacctagagagtgaaaactag 157  Q
     |||||| ||||||||||||| |||||||||    
T  38855256 agtaagagaaaacctagagagagaaaactag 38855286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 38440672 - 38440801
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    ||||| || ||||||||||| || | |||||||||||||||||||||||||| ||||||||||||||| |||||| | | ||||| | | || | |||||    
T  38440672 aatcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagataaagaggag-tgatttcaggtcaagaattgac 38440770  T
Q  101 ccaaaaccccccttcaatgaagacactgtaa 131  Q
     ||||||| || ||||||||||| |||||||    
T  38440771 tcaaaaccaccattcaatgaagaaactgtaa 38440801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 49552318 - 49552439
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||||| ||||||||||| |||  ||||||| |||||||||||||||||| |||||| |||| |||||||| ||||| ||||| | | || | |||||    
T  49552318 aatcacaaagaaaaaacctagattaatgtgaaattcacttatttagattgaaatagagaaaaaatgatgaaga-ggggtgatttcaggtcaagaattgac 49552416  T
Q  101 ccaaaaccccccttcaatgaaga 123  Q
    |||||||| ||| ||||||||||    
T  49552417 ccaaaaccacccatcaatgaaga 49552439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 3850555 - 3850626
Alignment:
Q  6 caaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggg 77  Q
    |||| |||||||||| || | ||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  3850555 caagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagagggg 3850626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 14464461 - 14464368
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaa 121  Q
    |||||||||||||||||||||||||| || ||||||||||||||| | ||||| ||||| | | || | ||||||||||||| ||||||||||||    
T  14464461 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaata-ggggtgatttcaggtcaagaattgacccaaaaccacccttcaatgaa 14464368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 2342445 - 2342396
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagaggg 76  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2342445 tgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagaggg 2342396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 46178557 - 46178481
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaat-cacttatttagattgaattagagagaaaaagatgaagaggg 76  Q
    |||||| | ||||||||||| || | ||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  46178557 aatcacgaagaaaaaacctagatctatgtgaaaaagcacttatttagattgaattagagagaaaaagatgaagaggg 46178481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 50611522 - 50611672
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | | |||||||||||||||||||||||| || ||||||||||||||||||||| | ||||  | | || | |||||||||||||      
T  50611522 aaaaaacctagatctatatgaaaatcacttatttagattgaaatatagagaaaaagatgaagagggg-tgattttaggtcaataattgacccaaaaccat 50611620  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    |  |||||||||| ||  ||||| ||||| || ||||  |||||||||||||    
T  50611621 ctctcaatgaagaaacaataagagaaaacttaaagagaaaaaactagagccg 50611672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 17237772 - 17237710
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||||| || | |||||||||||||||||||||||||| |||||||||| |||||||||    
T  17237772 aaaaaacctaaatctatgtgaaaatcacttatttagattgaaatagagagaaacagatgaaga 17237710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 147
Target Start/End: Complemental strand, 37169180 - 37169068
Alignment:
Q  31 aaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacactgta 130  Q
    ||||||||||||||| |||||||||||||||||||| |||||| | ||| ||||| | |||||| |||| |||||| | ||| |||||||||| |||       
T  37169180 aaaatcacttatttatattgaattagagagaaaaaggtgaaga-gaggtgatttcaggtaaaaaattgatccaaaatcacccctcaatgaagaaact--- 37169085  T
Q  131 agaaaaaacctagagag 147  Q
     ||||||||||||||||    
T  37169084 tgaaaaaacctagagag 37169068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 22802971 - 22802927
Alignment:
Q  31 aaaatcacttatttagattgaattagagagaaaaagatgaagagg 75  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  22802971 aaaatcacttatttagattgaaatagagagaaaaagatgaagagg 22802927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 29503442 - 29503370
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||| ||||||||||| || | ||||||||||| |||||||||||||| || ||||||||| |||||||    
T  29503442 aatcacaaagaaaaaacctagatctatgtgaaaatcaattatttagattgaaatatagagaaaaatatgaaga 29503370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 166
Target Start/End: Original strand, 51202384 - 51202508
Alignment:
Q  41 atttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacactgtaagaaaaaacc 140  Q
    |||||||||||| |||||||||||| ||||||| ||| | ||||| | | || | ||||||||||| | ||| ||||| |||| ||||||||| ||||||    
T  51202384 atttagattgaaatagagagaaaaatatgaagatggg-tgatttcaggtcaagaattgacccaaaatcacccctcaataaagaaactgtaagagaaaacc 51202482  T
Q  141 tagagagtgaaaactagagccgactt 166  Q
    || ||||  |||||||  ||||||||    
T  51202483 taaagagaaaaaactaaggccgactt 51202508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 21488064 - 21488019
Alignment:
Q  28 gtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||| |||||||||||||||||| | ||||||||||||||||||    
T  21488064 gtgaaagtcacttatttagattgaaatggagagaaaaagatgaaga 21488019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 31794033 - 31793996
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaa 64  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  31794033 tgtgaaaatcacttatttagattgaaatagagaaaaaa 31793996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 144
Target Start/End: Original strand, 36735277 - 36735389
Alignment:
Q  31 aaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacactgta 130  Q
    ||||||||||||||| |||||| || ||||| ||| ||||||| ||| | ||||| | |||||| |||||| |||||| ||  |||||||||| |||  |    
T  36735277 aaaatcacttatttaaattgaaatatagagagaaaaatgaaga-gggatgatttcaggtaaaaaattgaccaaaaaccacctctcaatgaagaaactaga 36735375  T
Q  131 agaaaaaacctaga 144  Q
    ||| ||||| ||||    
T  36735376 agagaaaacttaga 36735389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 42719472 - 42719436
Alignment:
Q  29 tgaaaatcacttatttagattgaattagagagaaaaa 65  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  42719472 tgaaaatcacttatttaaattgaaatagagagaaaaa 42719436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 27249256 - 27249400
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| || ||||||||||||||||||||| | ||||| | | ||   ||||||||||||| |    
T  27249256 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagggg-tgatttcaggtcaagtattgacccaaaaccac 27249354  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaacta 156  Q
    ||||||||||||| | ||||||| ||||||||||||| ||||||||    
T  27249355 ccttcaatgaagaaattgtaagagaaaacctagagagagaaaacta 27249400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 162
Target Start/End: Complemental strand, 30420653 - 30420503
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| | | |||| |||| |||||||| |    
T  30420653 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-ggggtgatttcaggtcaaaaattgatccaaaaccac 30420555  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    || |||||||||| | ||||| ||||||||||||||| ||| ||||| ||||    
T  30420554 ccctcaatgaagaaattgtaaaaaaaaacctagagagagaagactagggccg 30420503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 8971721 - 8971874
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaatta--gagagaaaaagatgaagagggggtaatttccgataaaaatttg 98  Q
    |||||||| ||||||||||| || | ||||||||||||||||||||||| || ||  |||||||||||||||||||||  | ||||| | | || | |||    
T  8971721 aatcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattaaaataaagagagaaaaagatgaagaggga-tgatttcaggtcaagaattg 8971819  T
Q  99 acccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaa 153  Q
    |||||||||| ||| |||||||||| |||||||||||||||||| |||| |||||    
T  8971820 acccaaaaccacccctcaatgaagaaactgtaagaaaaaacctaaagagagaaaa 8971874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 6173608 - 6173463
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| | | || | | |||| |||||| |    
T  6173608 aaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagagggg-tgatttcaggtcaagaatagaccgaaaaccac 6173510  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactag 157  Q
    || |||||||||| || |||| | ||||||||||||| |||||||||    
T  6173509 ccctcaatgaagaaaccgtaaaagaaaacctagagagagaaaactag 6173463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 27 - 166
Target Start/End: Complemental strand, 36233965 - 36233827
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| | ||||| | | |  | ||||||||||||| ||| |||||||||| |     
T  36233965 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagggg-tgatttcaggtcatgaattgacccaaaaccacccctcaatgaagaaat 36233867  T
Q  127 tgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    || |||| |||| |||||||| ||||||||| ||||||||    
T  36233866 tgcaagagaaaatctagagagagaaaactagggccgactt 36233827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 2808576 - 2808729
Alignment:
Q  12 aaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccc 111  Q
    ||||||||| || | ||||||||||||||||||||| |||| |||||||||| ||||||||| ||||| ||||| | | || | ||||||||||||| ||    
T  2808576 aaaaacctagatctatgtgaaaatcacttatttagactgaaatagagagaaatagatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccacc 2808674  T
Q  112 cttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    | |||||||||| | || ||||||||||||||| |  ||||| ||| ||||||||    
T  2808675 cctcaatgaagaaaatgaaagaaaaaacctagaaaaagaaaattagggccgactt 2808729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 9986453 - 9986597
Alignment:
Q  14 aaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaaga--tgaagagggggtaatttccgataaaaatttgacccaaaaccccc 111  Q
    ||||||| || | ||||||||||||||||||||||||||||||||| ||||| |  |||||||||  | ||||| | | || | ||||||||||||| ||    
T  9986453 aaacctagatctatgtgaaaatcacttatttagattgaattagagataaaaaaaattgaagaggga-tgatttcaggtcaagaattgacccaaaaccacc 9986551  T
Q  112 cttcaatgaagacactgtaagaaaaaacctagagagtgaaaactag 157  Q
    | |||||||||| ||||||||| ||||||||||||| |||||||||    
T  9986552 cctcaatgaagaaactgtaagagaaaacctagagagagaaaactag 9986597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 142
Target Start/End: Original strand, 459379 - 459509
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    ||||||||||||| | |||||||||| |||||||| | |||| ||||||||||| |||||||| ||||| ||||| | | |||| ||||||||||||| |    
T  459379 aaaaaacctatatctatgtgaaaatcgcttatttaaaatgaaatagagagaaaaggatgaaga-ggggtgatttcaggtcaaaaattgacccaaaaccac 459477  T
Q  111 ccttcaatgaagacactgtaagaaaaaaccta 142  Q
    || |||||||||| |||| |||| ||||||||    
T  459478 ccctcaatgaagaaactggaagagaaaaccta 459509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 26025504 - 26025597
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaa 94  Q
    |||||||| ||||||||||| || | |||||||| ||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||| ||||    
T  26025504 aatcacaaagaaaaaacctagatctatgtgaaaaccacttatttagattgaaatagagagaaaaagatgaagatggggtgatttcagatcaaaa 26025597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 34598974 - 34598813
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    ||||||||  |||||| ||| || | |||||||||||||||||||||||||| |||||||||||||||||||| | | | ||||  | | || | ||||     
T  34598974 aatcacaaaaaaaaaaactagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatgagttgatttgaggtcaagaattgat 34598875  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    |||||||| ||| |||| ||||| || |||||| ||||||||||||| ||||| ||| ||||    
T  34598874 ccaaaaccacccctcaacgaagaaacggtaagagaaaacctagagagagaaaattagggccg 34598813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 4192825 - 4192749
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggg 77  Q
    |||||||| ||||||||||| || | |||||||||||||||||||||||||| || |||||||||||||||||||||    
T  4192825 aatcacaaagaaaaaacctaaatatatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagagggg 4192749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 27 - 162
Target Start/End: Original strand, 21570529 - 21570663
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    |||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| | | || | ||||||||||||| ||  |||||||| |  |    
T  21570529 tgtgaaaatcacttatttagattgaaatatagagaaaaagatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccaccactcaatgaaaaatc 21570627  T
Q  127 tgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    || |||| ||||||||||||  ||||||||| ||||    
T  21570628 tggaagagaaaacctagagacagaaaactagggccg 21570663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 40626122 - 40626284
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||||| |||||||| || || | |||||||||| ||||||||||||||| |||||||||||||| ||||| ||||| ||||| | | || | | |||    
T  40626122 aatcacaaagaaaaaacgtagatctatgtgaaaatcccttatttagattgaaatagagagaaaaagacgaaga-ggggtgatttcaggtcaagaatagac 40626220  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgac 164  Q
    |||||| | ||| ||||| |||| | || |||| |||||||| |||| ||||||||| ||||||    
T  40626221 ccaaaatcacccctcaattaagaaaatggaagagaaaacctaaagagagaaaactagggccgac 40626284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 153
Target Start/End: Complemental strand, 45128180 - 45128040
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||||||| |||||||||||||||||| || ||||||||||||||||| ||||| ||||| | | || | ||||||||||||| |    
T  45128180 aaaaaacctagatctatgtgaaagtcacttatttagattgaaataaagagaaaaagatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccac 45128082  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaa 153  Q
    || |||||||||| |  | |||| ||||||||||||| |||||    
T  45128081 cc-tcaatgaagaaatgggaagagaaaacctagagagagaaaa 45128040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 31581814 - 31581888
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagg 75  Q
    ||||| || ||||||| ||| || | |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31581814 aatcaaaaagaaaaaaactagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagagg 31581888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 41712870 - 41713015
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||||||||||||||||||||||| || ||||||||||| |||||| |  |||| |||||   | || | || |||||||||| |    
T  41712870 aaaaaacctaaatctatgtgaaaatcacttatttagattaaaatagagagaaaatgatgaa-aatgggtgatttcacgtcaagaattaacccaaaaccac 41712968  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactag 157  Q
    || |||||||||| | ||||||| |||||||||| || |||||||||    
T  41712969 ccctcaatgaagaaattgtaagagaaaacctagatagagaaaactag 41713015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 7015805 - 7015941
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||||||||||||||||| || | ||||||||||| |||||||||||||| || |||||||||||| | || ||||| ||||| | | || | |||||    
T  7015805 aatcacaaggaaaaaacctaaatctatgtgaaaatcaattatttagattgaaataaagagaaaaagattagga-ggggtgatttcaggtcaagaattgac 7015903  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaa 138  Q
    ||||||||  ||  ||||||||| | ||||||| ||||    
T  7015904 ccaaaaccaacccccaatgaagaaattgtaagagaaaa 7015941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 27477141 - 27477065
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggg 77  Q
    |||||||| ||||||| ||| || | ||||||||| |||||||||||||||| || |||||||||||||||||||||    
T  27477141 aatcacaaagaaaaaatctagatctatgtgaaaattacttatttagattgaaatatagagaaaaagatgaagagggg 27477065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 3270323 - 3270477
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    ||||||||  |||||||||| || | |||||||||||||||||||||||||| || | ||||||||||||| |  | || ||||| | | || | |||||    
T  3270323 aatcacaaaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaaaagaaaaagatgaa-aatgagtgatttcaggtcaagaattgac 3270421  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaacta 156  Q
    |||||||| ||| |||||||||| |  |||||| ||||| |||||||  |||||||    
T  3270422 ccaaaaccacccctcaatgaagaaatcgtaagagaaaacttagagagaaaaaacta 3270477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 3725167 - 3725093
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagg 75  Q
    |||||||| ||||||| | | || | ||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  3725167 aatcacaaagaaaaaatcaagatctatgtgaaaatcacttatttatattgaaatagagagaaaaagatgaagagg 3725093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 32680687 - 32680749
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||||| || | ||||||| |||||||||||||||||| ||||||||||||||||||||    
T  32680687 aaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaaga 32680749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 32913228 - 32913152
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggg 77  Q
    |||||||| ||||||||||| || | ||||||||||||||||||| |||||| || |||||||| ||| ||||||||    
T  32913228 aatcacaaagaaaaaacctagatctatgtgaaaatcacttatttaaattgaaatatagagaaaaggatcaagagggg 32913152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 153
Target Start/End: Original strand, 20047187 - 20047327
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||| ||| ||||||||||||||||||  ||||||||||||||||| |  |||| ||||| | | || | |||| |||||||  |    
T  20047187 aaaaaacctaaatctatgtaaaagtcacttatttagattgaaaaagagagaaaaagatgaata--gggtgatttcaggtcaagaattgatccaaaactac 20047284  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaa 153  Q
    ||  ||||||||| || |||||| ||||||||||||| |||||    
T  20047285 cccccaatgaagaaacggtaagagaaaacctagagagagaaaa 20047327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 22421722 - 22421659
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaa 64  Q
    |||||||| ||||||||||| || | ||||||| |||||||||||||||||| |||||||||||    
T  22421722 aatcacaaagaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaa 22421659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 162
Target Start/End: Original strand, 33229129 - 33229243
Alignment:
Q  47 attgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacactgtaagaaaaaacctagaga 146  Q
    |||||| |||||| |||||||||||||| || | ||||  | | || | ||||||||||||| |||||||||||||| || |||||| ||||||||||||    
T  33229129 attgaaatagagaaaaaaagatgaagagagg-tgattttagctcaataattgacccaaaaccacccttcaatgaagaaacagtaagagaaaacctagaga 33229227  T
Q  147 gtgaaaactagagccg 162  Q
    | | ||||||| ||||    
T  33229228 gaggaaactagggccg 33229243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 42949691 - 42949624
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagag-aaaaagatgaagagggg 77  Q
    |||||||||| || | |||||||||||||||||||||||||| || |||| |||||||||||||||||    
T  42949691 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaaagatgaagagggg 42949624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 39641964 - 39642026
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||||| || | ||||||||||| ||||||| |||||| ||||||||||||||||||||    
T  39641964 aaaaaacctagatctatgtgaaaatcatttatttaaattgaaatagagagaaaaagatgaaga 39642026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 40660026 - 40660183
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||||| ||||||| ||| || | ||||||||||||||||||||||||||  | |||||||||||||||||  | || ||||| | | || | |||||    
T  40660026 aatcacaaagaaaaaatctagatctatgtgaaaatcacttatttagattgaa--atagagaaaaagatgaaga-tgtgtgatttcaggtcaagaattgac 40660122  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
     ||||||| ||| |||||||||| ||| ||||| |||| ||| | || ||||||||| ||||    
T  40660123 tcaaaaccaccc-tcaatgaagaaactctaagagaaaatctaaaaagagaaaactagggccg 40660183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 8805853 - 8805781
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||| ||||||||||| ||   ||||||||||||||||||| |||||| || ||||||||| |||||||    
T  8805853 aatcacaaagaaaaaacctagatccatgtgaaaatcacttatttaaattgaaataaagagaaaaatatgaaga 8805781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 162
Target Start/End: Complemental strand, 25086986 - 25086862
Alignment:
Q  35 tcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacactgtaagaa 134  Q
    |||||||| |||||| || ||||  |||||||||||||||||| | ||||| | | || | ||||||||||||| ||| | |||||||| || | ||||     
T  25086986 tcacttatatagattcaaatagatggaaaaagatgaagagggg-tgatttcaggtcaataattgacccaaaaccacccctaaatgaagaaaccggaagag 25086888  T
Q  135 aaaacctagagagtgaaaactagagccg 162  Q
    ||||||||||||  ||||||||||||||    
T  25086887 aaaacctagaga--gaaaactagagccg 25086862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 32197889 - 32197961
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||| ||||||||||| |||| ||  ||||||| ||||||| |||||| || |||||||||||||||||    
T  32197889 aatcacaaagaaaaaacctaaatttatgcaaaaatcatttatttatattgaaataaagagaaaaagatgaaga 32197961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 41431015 - 41430938
Alignment:
Q  1 aatcacaaggaaaaa-acctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggg 77  Q
    |||||||| |||||| ||||| || | ||| ||| | |||||||||||||||| || |||||||||||||||||||||    
T  41431015 aatcacaaagaaaaacacctagatctatgtaaaagtgacttatttagattgaaatatagagaaaaagatgaagagggg 41430938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 27949399 - 27949339
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaa 71  Q
    |||||||||| || | ||||||||||||||||||||||||||  |||| ||||| ||||||    
T  27949399 aaaaaacctagatctatgtgaaaatcacttatttagattgaaacagagcgaaaaggatgaa 27949339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 18695004 - 18694961
Alignment:
Q  31 aaaatcacttatttagattgaattagagaga-aaaagatgaaga 73  Q
    |||||||||||||||||||||| |||||||| ||||||||||||    
T  18695004 aaaatcacttatttagattgaaatagagagaaaaaagatgaaga 18694961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 31581891 - 31581942
Alignment:
Q  96 ttgacccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagag 147  Q
    ||||||||||||| ||| |||||||||| || |||||| |||||||||||||    
T  31581891 ttgacccaaaaccacccctcaatgaagaaacagtaagagaaaacctagagag 31581942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 8308159 - 8308097
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaa 65  Q
    |||||| | ||||||||||| || | ||||||||||||  ||||||||||||||||||| |||||    
T  8308159 aatcacgaagaaaaaacctagatctatgtgaaaatcac--atttagattgaattagagaaaaaaa 8308097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 4e-31; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 147
Target Start/End: Original strand, 38706815 - 38706950
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| ||||||||||||||||||||  |||| ||||  ||| || | ||||||||||||| |    
T  38706815 aaaaaacctaaatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga-agggtgattttagatcaagaattgacccaaaaccac 38706913  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagag 147  Q
    || |||||||||| || ||||||||||||||||||||    
T  38706914 ccctcaatgaagaaacagtaagaaaaaacctagagag 38706950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 166
Target Start/End: Complemental strand, 4643821 - 4643686
Alignment:
Q  32 aaatcacttatttagattgaattagagagaaaaagatgaagag-ggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacactgta 130  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| | | |||| || ||| |||||| ||| |||||||||| ||||||    
T  4643821 aaatcacttatttagattgaaatagagagaaaaagatgaagaggggggtgatttcaggtcaaaaattcacctaaaaccacccctcaatgaagagactgta 4643722  T
Q  131 agaaaaaacctagagagtgaaaactagagccgactt 166  Q
    ||| |||||||||| || ||||||||| ||||||||    
T  4643721 agagaaaacctagaaagagaaaactagggccgactt 4643686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 162
Target Start/End: Complemental strand, 43444377 - 43444227
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| || |||||||||||||||||  |||| ||||| ||| |||| ||||||||||||  |    
T  43444377 aaaaaacctagatatatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-tgggtgatttcagatcaaaaattgacccaaaactac 43444279  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    || |||||||||  | ||||||| ||||||||||||| ||||||||| ||||    
T  43444278 ccctcaatgaaggaattgtaagagaaaacctagagagagaaaactagggccg 43444227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 10389848 - 10390008
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    ||||| |||||||||||||| || | ||||||| |||||||||||||||||| ||||||||||||||||||||  | || ||||| | | || | |||||    
T  10389848 aatcaaaaggaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaaga-tgagtgatttcaggtcaagaattgac 10389946  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    |||||||| ||| |||||||||| ||| ||||| |||||||||| || ||||||||| ||||    
T  10389947 ccaaaaccacccctcaatgaagaaactataagagaaaacctagaaagagaaaactagggccg 10390008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 21090147 - 21089992
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||| | ||||||||||| || | ||||||||||||||||||| |||||| ||||||||||||||||||||  | || ||||| ||| |||  |||||    
T  21090147 aatcacgaagaaaaaacctaaatctatgtgaaaatcacttatttatattgaaatagagagaaaaagatgaaga-tgagtgatttcagatcaaagattgac 21090049  T
Q  101 ccaaaacc-ccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaacta 156  Q
    |||||||| |||| |||||||||| |||  |||| ||||||||||||| ||||||||    
T  21090048 ccaaaaccaccccctcaatgaagaaactagaagagaaaacctagagagagaaaacta 21089992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 166
Target Start/End: Complemental strand, 9283895 - 9283741
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||| |||||||||||||||||||||| || |||||||| |||||||||||| | ||||| | | ||   ||||||||||||| |    
T  9283895 aaaaaacctagatctatgtaaaaatcacttatttagattgaaataaagagaaaacgatgaagagggg-tgatttcaggttaagtattgacccaaaaccac 9283797  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    || |||||||||| | ||||||| | ||||||||||| ||||||||| ||||||||    
T  9283796 ccctcaatgaagaaattgtaagagataacctagagagagaaaactagggccgactt 9283741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 27 - 166
Target Start/End: Original strand, 9528999 - 9529137
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    |||||||||||||||||||||||||| || |||||||||||| |||| ||||| ||||| | | || | ||||||||||||| ||| ||| |||||| ||    
T  9528999 tgtgaaaatcacttatttagattgaaataaagagaaaaagataaaga-ggggtgatttcaggtcaagaattgacccaaaaccacccctcagtgaagaaac 9529097  T
Q  127 tgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    ||||||| |||||||| ||||  |||||||| ||||||||    
T  9529098 tgtaagagaaaacctaaagagataaaactagggccgactt 9529137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 162
Target Start/End: Complemental strand, 20569236 - 20569086
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||||||||||| |||||||||||||| || ||||||||| ||||||| ||||| ||||| | | || | ||||||||||||| |    
T  20569236 aaaaaacctagatctatgtgaaaatcatttatttagattgaaataaagagaaaaaaatgaaga-ggggtgatttcaggttaagaattgacccaaaaccac 20569138  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    || |||||||||| | | || |||||||||||||| | ||||||||||||||    
T  20569137 ccatcaatgaagaaattatacgaaaaaacctagagggagaaaactagagccg 20569086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 34024531 - 34024676
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    ||||| || ||||||||||| || | ||||||||| |||||||||||||||| |||||||||||||||||||| ||||| ||||| | | || | ||||     
T  34024531 aatcaaaaagaaaaaacctagatctatgtgaaaataacttatttagattgaaatagagagaaaaagatgaaga-ggggtgatttcaggtcaagaattgat 34024629  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagag 147  Q
    |||||||| ||| |||||||||| |||  ||||||||| ||||||||    
T  34024630 ccaaaaccacccctcaatgaagaaactaaaagaaaaaatctagagag 34024676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 35965079 - 35965214
Alignment:
Q  11 aaaaaacctatatttttgtgaaaa-tcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccc 109  Q
    |||||||||| || | |||||||| ||||||||| |||||||| |||||||||||||||||||| | ||| ||||| | |||||| |||||||||||||     
T  35965079 aaaaaacctagatctatgtgaaaaatcacttattcagattgaaatagagagaaaaagatgaaga-gaggtgatttcaggtaaaaaattgacccaaaacca 35965177  T
Q  110 cccttcaatgaagacactgtaagaaaaaacctagaga 146  Q
    ||| ||||||||||  ||| |||| ||||||||||||    
T  35965178 cccctcaatgaagaatctggaagagaaaacctagaga 35965214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 1531875 - 1531745
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagaga-aaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagaca 125  Q
    |||||||||||||||||||||||||| |||||||| ||||||| |||| ||||| ||||| | | || | ||||||||| ||| ||| |||||||||| |    
T  1531875 tgtgaaaatcacttatttagattgaaatagagagagaaaagataaaga-ggggtgatttcaggtcaagaattgacccaataccacccctcaatgaagaaa 1531777  T
Q  126 ctgtaagaaaaaacctagagagtgaaaactag 157  Q
    |||||||| |||||||||| || |||||||||    
T  1531776 ctgtaagagaaaacctagaaagagaaaactag 1531745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 9645654 - 9645804
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | ||||||| |||||||||||||||||| |||||| ||||||||||||||||| | || || | | || | ||||||||||||  |    
T  9645654 aaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagacaaaaagatgaagagggg-tgatatcaggtcaagaattgacccaaaacgac 9645752  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    || |||||||||| ||||||||| ||| ||||||||  ||||||||| ||||    
T  9645753 ccctcaatgaagaaactgtaagataaagcctagagaaagaaaactagggccg 9645804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 2115693 - 2115837
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| || |||||||||||||||||    || ||||| | | || | ||||||||||||| |    
T  2115693 aaaaaacctaaatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-aaagtgatttcaggtcaataattgacccaaaaccac 2115791  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaacta 156  Q
    || |||||||| | | |||||||||||| |||||||| ||||||||    
T  2115792 ccctcaatgaataaattgtaagaaaaaatctagagagagaaaacta 2115837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 162
Target Start/End: Complemental strand, 25273864 - 25273709
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaa-----aagatgaagagggggtaatttccgataaaaatttgacccaaa 105  Q
    |||||||||| || | |||||||||||||||||||||||||| ||||||||||     |||||||||| ||||| ||||| | | || | |||| |||||    
T  25273864 aaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaagatgaagatgaaga-ggggtgatttcaggtcaagaattgatccaaa 25273766  T
Q  106 accccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    ||| ||| |||||| ||| ||||||||| |||| |||||||| ||||||||| ||||    
T  25273765 accacccctcaatggagaaactgtaagagaaaatctagagagagaaaactagggccg 25273709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 31381766 - 31381917
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||||| |||||||| || || | ||||||||||||||||||| ||||||  ||||||||||||||| ||| ||||| ||||| | | || | |||||    
T  31381766 aatcacaaagaaaaaacttagatctatgtgaaaatcacttatttaaattgaaaaagagagaaaaagatg-agaaggggtgatttcaggtcaagaattgac 31381864  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaa 153  Q
    |||||||| ||| |||| ||||| || |||||| |||| |||||||| |||||    
T  31381865 ccaaaaccacccatcaacgaagaaaccgtaagagaaaatctagagagagaaaa 31381917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 10359641 - 10359787
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||| | ||||||||||| || | ||| |||||||||||||||||| ||| |||||||||||||||||||   |||| ||||| | | |||| |||||    
T  10359641 aatcacgaagaaaaaacctagatatatgttaaaatcacttatttagatcgaaatagagagaaaaagatgaag-ttgggtgatttcaggtcaaaaattgac 10359739  T
Q  101 ccaaaacc-ccccttcaatgaagacactgtaagaaaaaacctagagag 147  Q
    |||||||| |||| |||||||||| |||| |||| |||| ||||||||    
T  10359740 ccaaaaccaccccctcaatgaagaaactgaaagagaaaatctagagag 10359787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 47416852 - 47416736
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| | |||||   | || | ||||||||||| | ||| |||||||||| |     
T  47416852 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagggg-tgatttcaagtcaataattgacccaaaatcacccctcaatgaagaaat 47416754  T
Q  127 tgtaagaaaaaacctaga 144  Q
    ||||||| ||||||||||    
T  47416753 tgtaagagaaaacctaga 47416736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 51317980 - 51317908
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    ||||| || ||||||||||| || | |||||||||||||||||||||||||| ||||||||||||||||||||    
T  51317980 aatcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga 51317908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 43154126 - 43154279
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| ||||||||||| |||||||||||| | |||||   | || | ||||||||||||| |    
T  43154126 aaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaa-gatgaagagggg-tgatttcaagtcaagaattgacccaaaaccac 43154223  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    |  |||||| | | | ||||||| |||||||| |||| ||||||||| ||| ||||    
T  43154224 ctctcaatggataaattgtaagataaaacctaaagagagaaaactagggccaactt 43154279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 53616756 - 53616906
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaacccc 110  Q
    |||||||||| || | |||||||||||||||||||||||||| || |||||||| |||||||| | ||| ||||| | | || | ||||||||||  | |    
T  53616756 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaacgatgaaga-gtggtgatttcaggtcaagaattgacccaaagtcac 53616854  T
Q  111 ccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    || |||| ||||| | ||||||| ||||||||||||| ||||| ||| ||||    
T  53616855 ccctcaacgaagaaattgtaagagaaaacctagagagagaaaattagggccg 53616906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 27 - 162
Target Start/End: Original strand, 50766630 - 50766766
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatga--agac 124  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||| ||| | ||||| ||| || | ||||||||||||| ||  |||||||  |||     
T  50766630 tgtgaaaatcatttatttagattgaaataaagagaaaaagatgaaga-gggatgatttcagatcaagaattgacccaaaaccacctctcaatgaagagaa 50766728  T
Q  125 actgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    | ||||||| |||||||||||||  |||||||| ||||    
T  50766729 attgtaagagaaaacctagagagaaaaaactagggccg 50766766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 8009455 - 8009526
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||| |||||||| || || | |||||||||||||||||||||||||| ||||||||||||||||||||    
T  8009455 aatcacaaagaaaaaac-tagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga 8009526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 56194583 - 56194519
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagg 75  Q
    |||||||||| || | ||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  56194583 aaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagagg 56194519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 35 - 162
Target Start/End: Complemental strand, 6972769 - 6972644
Alignment:
Q  35 tcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacactgtaagaa 134  Q
    |||||||||||||||||| || ||| ||||||||||||| | ||| ||||| ||| || | ||||||||||||| |||  ||||||||| || | |||||    
T  6972769 tcacttatttagattgaaatacagataaaaagatgaaga-gaggtgatttcagatcaagaattgacccaaaaccaccc-ccaatgaagaaaccggaagaa 6972672  T
Q  135 aaaacctagagagtgaaaactagagccg 162  Q
    ||||||||||||| ||||| ||| ||||    
T  6972671 aaaacctagagagagaaaattagggccg 6972644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 147
Target Start/End: Original strand, 5333656 - 5333768
Alignment:
Q  31 aaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacactgta 130  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| |  |||||   | |||| ||||||||||||| |||  ||||||||| || | |    
T  5333656 aaaatcacttatttatattgaaatagagagaaaaagatgaagagggtg--atttcatgtcaaaaattgacccaaaaccaccc--caatgaagaaacggga 5333751  T
Q  131 agaaaaaacctagagag 147  Q
    ||| |||||||||||||    
T  5333752 agagaaaacctagagag 5333768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 37188688 - 37188847
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||||| |||||||| || || | |||||||||||||||||||||||||| || |||||||||||||||||  | || ||||| | | || | |||||    
T  37188688 aatcacaaagaaaaaac-tagatatatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaaga-tgagtgatttcaggtcaataattgac 37188785  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    |||||||| | | || ||||| |  ||  |||| ||||||||||||| ||||||||| ||||    
T  37188786 ccaaaaccactcctcgatgaaaaatctagaagagaaaacctagagagagaaaactagggccg 37188847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 1008289 - 1008221
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatg 69  Q
    |||||| | ||||||| ||| |||| ||||||||||||||||||||||| || ||||||||||||||||    
T  1008289 aatcacgaagaaaaaaactaaatttatgtgaaaatcacttatttagattaaaatagagagaaaaagatg 1008221  T

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Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 868104 - 867986
Alignment:
Q  48 ttgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagag 147  Q
    ||||| |||||||||||||||||||||||| | |||||   | || | | |||| |||||| ||| |||||||||| |||| |||| |||||||||||||    
T  868104 ttgaaatagagagaaaaagatgaagagggg-tgatttcatgtcaagaatcgacctaaaaccacccctcaatgaagaaactggaagagaaaacctagagag 868006  T
Q  148 tgaaaactagagccgacttt 167  Q
     ||||||||| |||| ||||    
T  868005 agaaaactagggccggcttt 867986  T

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Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 14183772 - 14183729
Alignment:
Q  26 ttgtgaaaatcacttatttagattgaattagagagaaaaagatg 69  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  14183772 ttgtgaaaatcacttatttagattgaaatagagagaaaaagatg 14183729  T

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Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 18139016 - 18139082
Alignment:
Q  10 gaaaaaacctatatttttgtgaaaa-tcacttatttagattgaattagagagaaaaagatgaagagg 75  Q
    ||||||||||| || | |||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  18139016 gaaaaaacctagatgtatgtgaaaaatcacttatttagattgaaatagagagaaaatgatgaagagg 18139082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 44947303 - 44947233
Alignment:
Q  96 ttgacccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaactagagccgactt 166  Q
    ||||||||||||| ||| |||||||||| ||||||||| ||||| ||||||| |||||||||  |||||||    
T  44947303 ttgacccaaaaccacccctcaatgaagaaactgtaagagaaaacttagagagagaaaactaggaccgactt 44947233  T

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Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 49126229 - 49126295
Alignment:
Q  10 gaaaaaacctatatttttgtgaaaa-tcacttatttagattgaattagagagaaaaagatgaagagg 75  Q
    ||||||||||| || | |||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  49126229 gaaaaaacctagatgtatgtgaaaaatcacttatttagattgaaatagagagaaaatgatgaagagg 49126295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 35261186 - 35261109
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagaga-gaaaaagatgaagagggg 77  Q
    |||||| | ||||||||||| || | |||||||||||||||||||||||| | || ||| ||||||||||||||||||    
T  35261186 aatcacgaagaaaaaacctaaatctatgtgaaaatcacttatttagattgcaataaagaggaaaaagatgaagagggg 35261109  T

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Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 49680505 - 49680456
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagaggg 76  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  49680505 tgtgaaaatcacttatttggattgaaataaagagaaaaagatgaagaggg 49680456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 162
Target Start/End: Original strand, 27593959 - 27594091
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    ||||||| || ||||||||||||||| || |||||||||||||||||||| |  |||||   | |||| |||||| |||| | ||| |||||||||| |     
T  27593959 tgtgaaactcgcttatttagattgaaatatagagaaaaagatgaagagggtg--atttcatgtcaaaaattgacctaaaatcacccatcaatgaaga-ag 27594055  T
Q  127 tgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    || |||| |||||||||||||  |||||||| ||||    
T  27594056 tggaagagaaaacctagagaggaaaaactagggccg 27594091  T

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Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 5333584 - 5333626
Alignment:
Q  31 aaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  5333584 aaaatcacttatttatattgaaatagagagaaaaagatgaaga 5333626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 12265419 - 12265373
Alignment:
Q  31 aaaatcacttatttagattgaattagagagaaaaagatgaagagggg 77  Q
    |||||||||||||||||||||| ||| || |||||||||||||||||    
T  12265419 aaaatcacttatttagattgaaatagggataaaaagatgaagagggg 12265373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 65
Target Start/End: Complemental strand, 23100651 - 23100617
Alignment:
Q  31 aaaatcacttatttagattgaattagagagaaaaa 65  Q
    |||||||||||||||||||||||||||||||||||    
T  23100651 aaaatcacttatttagattgaattagagagaaaaa 23100617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 29965618 - 29965565
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaa 64  Q
    |||||||||| || | |||||||||||||||||||||||||| || ||||||||    
T  29965618 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaa 29965565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 21405508 - 21405440
Alignment:
Q  1 aatcacaaggaaaaaacct-atatttttgtgaaaatcacttatttagattgaattagagagaaaaagat 68  Q
    ||||||||||||||||  | |||| | ||||||||||||||| |||||||||| ||||||| |||||||    
T  21405508 aatcacaaggaaaaaagattatatctatgtgaaaatcacttaattagattgaaatagagaggaaaagat 21405440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 32952842 - 32952913
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||| |||||||| || || | |||||||| ||||||||||  ||||| ||||||||||||||||||||    
T  32952842 aatcacaaagaaaaaac-tagatctatgtgaaaaacacttatttaatttgaaatagagagaaaaagatgaaga 32952913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 50179671 - 50179611
Alignment:
Q  96 ttgacccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaacta 156  Q
    ||||||||||||| ||| |||||| ||| ||||||||| |||| |||||||| ||||||||    
T  50179671 ttgacccaaaaccacccctcaatggagaaactgtaagagaaaagctagagagagaaaacta 50179611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1931810 - 1931856
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttaga 47  Q
    |||||||| ||||||||||| || ||||||||||| |||||||||||    
T  1931810 aatcacaatgaaaaaacctagatctttgtgaaaataacttatttaga 1931856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 2624482 - 2624436
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattaga 57  Q
    |||||||||| || | |||||||||||||||||||||||||| ||||    
T  2624482 aaaaaacctagatctatgtgaaaatcacttatttagattgaaataga 2624436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 23329138 - 23329094
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaa 71  Q
    ||||||||||| |||||||| ||||| |||||| |||||||||||    
T  23329138 tgtgaaaatcagttatttaggttgaaatagagataaaaagatgaa 23329094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 46991251 - 46991287
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaa 63  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  46991251 tgtgaaaatcactcatttagattgaaatagagagaaa 46991287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 49072878 - 49072922
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaa 71  Q
    |||||||||||||||| ||||||||| || ||||||||| |||||    
T  49072878 tgtgaaaatcacttatatagattgaaataaagagaaaaatatgaa 49072922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 52098044 - 52098084
Alignment:
Q  31 aaaatcacttatttagattgaattagagagaaaaagatgaa 71  Q
    |||||||||||||||||||||| ||| ||||||| ||||||    
T  52098044 aaaatcacttatttagattgaaatagggagaaaaggatgaa 52098084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 8702 - 8557
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgac 100  Q
    |||||||| ||||||||||| || | |||||||||||||||||||||||||| |||||| ||||||||||| | ||||| |||||   | || | || ||    
T  8702 aatcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagataaaaagatgaa-aaggggtgatttcaagttaagaattaac 8604  T
Q  101 ccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagag 147  Q
    |||||||| ||| |||||||||| |||| |||| ||||||| |||||    
T  8603 ccaaaaccacccctcaatgaagaaactggaagagaaaacctggagag 8557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 361917 - 362043
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    ||||||||| ||||||||||||||||  | ||||||||||||| ||| ||||| ||||| | | || | ||||| ||||||| ||| |||||||||| ||    
T  361917 tgtgaaaattacttatttagattgaa--atagagaaaaagatggaga-ggggtgatttcaggtcaagaattgactcaaaaccacccctcaatgaagaaac 362013  T
Q  127 tgtaagaaaaaacctagagagtgaaaacta 156  Q
    ||||||| |||||||| |||| ||||||||    
T  362014 tgtaagagaaaacctaaagagagaaaacta 362043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 16427 - 16489
Alignment:
Q  11 aaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatgaaga 73  Q
    |||||||||| || | |||||||||||||||||||||||||| |||||||||| |||||||||    
T  16427 aaaaaacctaaatctatgtgaaaatcacttatttagattgaaatagagagaaacagatgaaga 16489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 201466 - 201534
Alignment:
Q  1 aatcacaaggaaaaaacctatatttttgtgaaaatcacttatttagattgaattagagagaaaaagatg 69  Q
    |||||||| ||||||| ||| || | |||||||||||||||||||||||||| || |||||||||||||    
T  201466 aatcacaaagaaaaaatctagatctatgtgaaaatcacttatttagattgaaatatagagaaaaagatg 201534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 5346 - 5237
Alignment:
Q  35 tcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacactgtaagaa 134  Q
    |||||||||||||||||| |||||||| ||||||||||| ||||| ||||| | | || | ||||||||||||| |||  ||||||||| || | ||||     
T  5346 tcacttatttagattgaagtagagagagaaagatgaaga-ggggtgatttcaggtcaagaattgacccaaaaccaccc-ccaatgaagaaacgggaagag 5249  T
Q  135 aaaacctagaga 146  Q
    ||||||||||||    
T  5248 aaaacctagaga 5237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 162
Target Start/End: Complemental strand, 6294 - 6161
Alignment:
Q  27 tgtgaaaatcacttatttagattgaattagagagaaaaagatgaagagggggtaatttccgataaaaatttgacccaaaaccccccttcaatgaagacac 126  Q
    |||||||||||||||||||||||| | |||||| ||||||||||||| ||||| ||||  | | || | ||||||  ||||| ||| |||||||||| ||    
T  6294 tgtgaaaatcacttatttagattggaatagagaaaaaaagatgaaga-ggggtgattttaggtcaagaattgacctgaaaccaccc-tcaatgaagaaac 6197  T
Q  127 tgtaagaaaaaacctagagagtgaaaactagagccg 162  Q
    || |||| |||||||| |||| ||||| ||| ||||    
T  6196 tggaagagaaaacctaaagagagaaaattagggccg 6161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 130 - 70
Alignment:
Q  96 ttgacccaaaaccccccttcaatgaagacactgtaagaaaaaacctagagagtgaaaacta 156  Q
    ||||||||||||| ||| |||||| ||| ||||||||| |||| |||||||| ||||||||    
T  130 ttgacccaaaaccacccctcaatggagaaactgtaagagaaaagctagagagagaaaacta 70  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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