View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11386A_low_528 (Length: 214)
Name: NF11386A_low_528
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11386A_low_528 |
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Alignment Details
Target: chr2 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 13 - 211
Target Start/End: Original strand, 1329436 - 1329634
Alignment:
| Q |
13 |
aatattggaatttgtcgctcttctgagtaccctgagatagataaggtcacaccaaagaagttagaggttctggaagagtttatcaaagataagaacatgc |
112 |
Q |
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| T |
1329436 |
aatattggaatttgtcgctcttctgagtaccctgagatagataaggtcacaccaaagaagttagaggttatggaagagtttatcaaagataagaacatgc |
1329535 |
T |
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| Q |
113 |
tagcacaaagcaataaagctgatgttcaagaagagaacaattcggatgaagaagccaaggaacccgaaccagaacatgacccggcagcggaaatgaatg |
211 |
Q |
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| T |
1329536 |
tagcacaaagcaataaagctgatgttcaagaagagaacaattcggatgaagaagccaaggaacccgaacccgaacctgaaccggaagaggatatgaatg |
1329634 |
T |
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