View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11386A_low_529 (Length: 214)

Name: NF11386A_low_529
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11386A_low_529
NF11386A_low_529
[»] chr2 (54 HSPs)
chr2 (56-200)||(14551232-14551375)
chr2 (56-144)||(18298080-18298168)
chr2 (56-144)||(25192900-25192988)
chr2 (56-144)||(20709782-20709870)
chr2 (66-145)||(4579786-4579865)
chr2 (74-142)||(25995313-25995381)
chr2 (90-140)||(4281761-4281811)
chr2 (74-140)||(5098743-5098809)
chr2 (56-94)||(1292074-1292112)
chr2 (56-94)||(7487149-7487187)
chr2 (56-94)||(39355168-39355206)
chr2 (56-94)||(41345090-41345128)
chr2 (42-113)||(7487254-7487326)
chr2 (74-113)||(15016566-15016605)
chr2 (74-113)||(39355062-39355101)
chr2 (56-94)||(15016461-15016499)
chr2 (56-94)||(18297171-18297209)
chr2 (56-94)||(19246665-19246703)
chr2 (56-94)||(20661399-20661437)
chr2 (56-94)||(24183600-24183638)
chr2 (56-94)||(25193994-25194032)
chr2 (56-94)||(31783796-31783834)
chr2 (56-94)||(34464844-34464882)
chr2 (56-94)||(34726607-34726645)
chr2 (103-140)||(43822409-43822446)
chr2 (58-94)||(8149964-8150000)
chr2 (58-94)||(8154588-8154624)
chr2 (62-94)||(43823878-43823910)
chr2 (74-113)||(8149858-8149897)
chr2 (74-113)||(8154482-8154521)
chr2 (74-113)||(9143612-9143651)
chr2 (74-113)||(34464738-34464777)
chr2 (56-94)||(12449057-12449095)
chr2 (56-94)||(12449246-12449284)
chr2 (56-94)||(16111708-16111746)
chr2 (74-108)||(18762894-18762928)
chr2 (56-94)||(20661598-20661636)
chr2 (56-94)||(22596307-22596345)
chr2 (56-94)||(22596507-22596545)
chr2 (56-94)||(25575326-25575364)
chr2 (56-94)||(31711513-31711551)
chr2 (56-94)||(34726799-34726837)
chr2 (76-138)||(36636912-36636974)
chr2 (56-94)||(37867157-37867195)
chr2 (60-94)||(37867358-37867392)
chr2 (56-94)||(42364495-42364533)
chr2 (56-94)||(42364696-42364734)
chr2 (56-94)||(44915494-44915532)
chr2 (76-113)||(1292179-1292216)
chr2 (61-94)||(15252847-15252880)
chr2 (56-85)||(31783997-31784026)
chr2 (77-109)||(2263603-2263635)
chr2 (62-94)||(36635764-36635796)
chr2 (74-110)||(39548069-39548105)
[»] chr8 (62 HSPs)
chr8 (56-144)||(32987414-32987502)
chr8 (56-145)||(1208717-1208806)
chr8 (56-144)||(39021983-39022071)
chr8 (56-144)||(7058122-7058210)
chr8 (56-143)||(4836671-4836758)
chr8 (56-143)||(4842116-4842203)
chr8 (74-144)||(8550530-8550600)
chr8 (47-144)||(15260820-15260918)
chr8 (73-144)||(7614093-7614164)
chr8 (74-140)||(15181817-15181883)
chr8 (56-113)||(42433709-42433766)
chr8 (56-94)||(1149918-1149956)
chr8 (56-94)||(1209789-1209827)
chr8 (56-94)||(4835521-4835559)
chr8 (56-94)||(34633216-34633254)
chr8 (56-94)||(35301632-35301670)
chr8 (56-94)||(39657711-39657749)
chr8 (45-113)||(41451102-41451171)
chr8 (74-113)||(10237381-10237420)
chr8 (74-113)||(19784298-19784337)
chr8 (74-113)||(30413941-30413980)
chr8 (74-113)||(34633321-34633360)
chr8 (74-113)||(41099209-41099248)
chr8 (74-113)||(43690667-43690706)
chr8 (56-94)||(1672934-1672972)
chr8 (56-94)||(7059168-7059206)
chr8 (56-94)||(10237487-10237525)
chr8 (56-94)||(15227163-15227201)
chr8 (56-94)||(15259858-15259896)
chr8 (56-94)||(17792895-17792933)
chr8 (56-94)||(23397446-23397484)
chr8 (56-94)||(27506709-27506747)
chr8 (56-94)||(30414047-30414085)
chr8 (56-94)||(34647174-34647212)
chr8 (56-94)||(35448613-35448651)
chr8 (75-110)||(1150026-1150061)
chr8 (56-91)||(2751241-2751276)
chr8 (74-113)||(15227057-15227096)
chr8 (56-115)||(40012180-40012239)
chr8 (56-94)||(185884-185922)
chr8 (64-94)||(4840974-4841004)
chr8 (74-108)||(9852297-9852331)
chr8 (56-94)||(10586064-10586102)
chr8 (56-94)||(15808888-15808926)
chr8 (56-94)||(15809843-15809881)
chr8 (56-94)||(17656621-17656659)
chr8 (56-94)||(18757331-18757369)
chr8 (56-94)||(21120195-21120233)
chr8 (56-94)||(23567489-23567527)
chr8 (56-94)||(23567646-23567684)
chr8 (56-94)||(24473247-24473285)
chr8 (74-108)||(34648133-34648167)
chr8 (56-94)||(40022391-40022429)
chr8 (56-94)||(41451238-41451276)
chr8 (65-94)||(1672774-1672803)
chr8 (56-85)||(18161291-18161320)
chr8 (44-108)||(23396473-23396538)
chr8 (56-93)||(40004721-40004758)
chr8 (56-93)||(42434566-42434603)
chr8 (62-94)||(28979291-28979323)
chr8 (76-108)||(35302591-35302623)
chr8 (74-110)||(40247288-40247324)
[»] chr1 (80 HSPs)
chr1 (56-144)||(18056792-18056880)
chr1 (56-144)||(22348047-22348135)
chr1 (62-136)||(16115865-16115939)
chr1 (57-144)||(45889605-45889692)
chr1 (74-139)||(35198155-35198220)
chr1 (74-134)||(37639368-37639428)
chr1 (56-144)||(23320054-23320150)
chr1 (86-136)||(179646-179696)
chr1 (89-144)||(30802437-30802492)
chr1 (87-140)||(8402284-8402337)
chr1 (56-94)||(16976088-16976126)
chr1 (56-94)||(23817443-23817481)
chr1 (56-94)||(24636059-24636097)
chr1 (56-94)||(43452675-43452713)
chr1 (56-94)||(48762226-48762264)
chr1 (56-94)||(49936832-49936870)
chr1 (56-113)||(23921898-23921955)
chr1 (74-113)||(11421621-11421660)
chr1 (74-113)||(18618862-18618901)
chr1 (74-113)||(24635953-24635992)
chr1 (74-113)||(25889028-25889067)
chr1 (74-113)||(49936937-49936976)
chr1 (74-113)||(50351830-50351869)
chr1 (56-94)||(1395354-1395392)
chr1 (56-94)||(9628602-9628640)
chr1 (56-94)||(10974636-10974674)
chr1 (56-94)||(11422573-11422611)
chr1 (56-94)||(14229175-14229213)
chr1 (56-94)||(17893075-17893113)
chr1 (56-94)||(17893276-17893314)
chr1 (56-94)||(18057812-18057850)
chr1 (56-90)||(19897655-19897689)
chr1 (56-94)||(21255843-21255881)
chr1 (56-94)||(23920974-23921012)
chr1 (56-94)||(31084405-31084443)
chr1 (56-94)||(33156995-33157033)
chr1 (56-94)||(42134136-42134174)
chr1 (56-94)||(45849111-45849149)
chr1 (56-93)||(9041055-9041092)
chr1 (76-113)||(34369689-34369726)
chr1 (74-110)||(4097911-4097947)
chr1 (58-94)||(18928783-18928819)
chr1 (77-113)||(28375494-28375530)
chr1 (56-87)||(6314256-6314287)
chr1 (74-113)||(16975981-16976020)
chr1 (74-113)||(19897760-19897799)
chr1 (74-113)||(20434722-20434761)
chr1 (74-113)||(31529665-31529704)
chr1 (74-113)||(33097432-33097471)
chr1 (74-113)||(43452569-43452608)
chr1 (74-113)||(44260545-44260584)
chr1 (74-113)||(48762331-48762370)
chr1 (56-94)||(12070613-12070651)
chr1 (56-94)||(12796426-12796464)
chr1 (56-94)||(14229364-14229402)
chr1 (56-94)||(17811286-17811324)
chr1 (56-94)||(18618968-18619005)
chr1 (56-94)||(18928958-18928996)
chr1 (56-94)||(20434617-20434655)
chr1 (56-90)||(21641597-21641631)
chr1 (56-94)||(23174405-23174443)
chr1 (56-94)||(23319018-23319056)
chr1 (56-94)||(25888924-25888961)
chr1 (56-94)||(29945419-29945457)
chr1 (56-94)||(31763778-31763816)
chr1 (56-94)||(31763976-31764014)
chr1 (56-94)||(32143772-32143810)
chr1 (56-94)||(32595107-32595145)
chr1 (56-94)||(32595286-32595324)
chr1 (56-94)||(42133947-42133985)
chr1 (56-94)||(45849312-45849350)
chr1 (56-94)||(45890596-45890634)
chr1 (74-112)||(51801734-51801772)
chr1 (61-94)||(14389852-14389885)
chr1 (56-93)||(19861717-19861754)
chr1 (74-110)||(6314142-6314178)
chr1 (76-108)||(21256777-21256809)
chr1 (74-110)||(23175525-23175561)
chr1 (57-85)||(41033274-41033302)
chr1 (56-84)||(49992521-49992549)
[»] chr7 (60 HSPs)
chr7 (56-144)||(30428881-30428969)
chr7 (56-145)||(48690903-48690992)
chr7 (56-144)||(46024035-46024123)
chr7 (56-143)||(15974906-15974993)
chr7 (62-145)||(28396736-28396819)
chr7 (74-144)||(5757413-5757483)
chr7 (56-141)||(12279753-12279838)
chr7 (76-144)||(46573469-46573537)
chr7 (56-141)||(12279649-12279734)
chr7 (56-139)||(48305245-48305327)
chr7 (86-145)||(48691030-48691089)
chr7 (74-138)||(44141226-44141290)
chr7 (83-144)||(33797966-33798027)
chr7 (74-113)||(763724-763763)
chr7 (77-144)||(32090607-32090674)
chr7 (56-94)||(11732045-11732083)
chr7 (56-94)||(16933138-16933176)
chr7 (56-94)||(16938521-16938559)
chr7 (56-94)||(30884117-30884155)
chr7 (56-94)||(31660202-31660240)
chr7 (56-94)||(35737081-35737119)
chr7 (56-94)||(41911007-41911045)
chr7 (44-113)||(46358516-46358586)
chr7 (56-94)||(46358653-46358691)
chr7 (56-94)||(47340280-47340318)
chr7 (56-94)||(48692053-48692091)
chr7 (56-94)||(48830602-48830640)
chr7 (56-113)||(25778845-25778902)
chr7 (74-113)||(16933244-16933283)
chr7 (74-113)||(16938627-16938666)
chr7 (74-113)||(30884222-30884261)
chr7 (74-113)||(31660096-31660135)
chr7 (74-113)||(41911109-41911148)
chr7 (56-94)||(763830-763868)
chr7 (56-94)||(15973863-15973901)
chr7 (56-94)||(26945717-26945755)
chr7 (56-94)||(32685847-32685885)
chr7 (56-94)||(34228608-34228646)
chr7 (56-94)||(38837732-38837770)
chr7 (56-94)||(44426601-44426639)
chr7 (56-94)||(46004538-46004576)
chr7 (56-94)||(46025063-46025101)
chr7 (56-94)||(46572577-46572615)
chr7 (76-113)||(20000674-20000711)
chr7 (74-110)||(35736975-35737011)
chr7 (56-87)||(33798743-33798774)
chr7 (74-113)||(34875516-34875555)
chr7 (55-94)||(38837542-38837581)
chr7 (56-94)||(7845100-7845138)
chr7 (56-94)||(24360758-24360796)
chr7 (56-94)||(31365274-31365312)
chr7 (56-94)||(34227679-34227717)
chr7 (56-94)||(34227879-34227917)
chr7 (56-94)||(41065972-41066010)
chr7 (56-94)||(43742252-43742290)
chr7 (56-94)||(44426802-44426840)
chr7 (56-93)||(12286723-12286760)
chr7 (76-117)||(27335625-27335665)
chr7 (56-92)||(26945517-26945553)
chr7 (74-110)||(39007652-39007688)
[»] chr3 (66 HSPs)
chr3 (56-144)||(50754014-50754102)
chr3 (56-144)||(51362407-51362495)
chr3 (61-144)||(52987619-52987702)
chr3 (47-144)||(19385284-19385381)
chr3 (56-144)||(7045269-7045357)
chr3 (56-144)||(8718109-8718197)
chr3 (56-144)||(9069996-9070084)
chr3 (56-144)||(16277383-16277471)
chr3 (74-144)||(39099223-39099293)
chr3 (76-143)||(23699356-23699423)
chr3 (76-143)||(23717811-23717878)
chr3 (76-143)||(23736267-23736334)
chr3 (86-140)||(17627204-17627258)
chr3 (56-94)||(2941821-2941859)
chr3 (56-94)||(3475302-3475340)
chr3 (56-94)||(6097579-6097617)
chr3 (56-94)||(8719140-8719178)
chr3 (56-94)||(9071027-9071065)
chr3 (56-94)||(9106400-9106438)
chr3 (56-94)||(9595875-9595913)
chr3 (56-94)||(10986485-10986523)
chr3 (56-94)||(19284804-19284842)
chr3 (56-94)||(30947806-30947844)
chr3 (56-94)||(34562402-34562440)
chr3 (56-94)||(50755195-50755233)
chr3 (56-94)||(54379295-54379333)
chr3 (74-113)||(3475407-3475446)
chr3 (74-113)||(9595980-9596019)
chr3 (74-113)||(19284698-19284737)
chr3 (74-113)||(26662538-26662577)
chr3 (74-113)||(33414013-33414052)
chr3 (74-113)||(46237758-46237797)
chr3 (74-113)||(47335059-47335098)
chr3 (56-94)||(8036803-8036841)
chr3 (56-94)||(16276672-16276710)
chr3 (56-94)||(19384384-19384422)
chr3 (56-94)||(26662433-26662471)
chr3 (56-94)||(26960759-26960797)
chr3 (56-94)||(27446216-27446254)
chr3 (56-94)||(36185908-36185946)
chr3 (56-94)||(46237653-46237691)
chr3 (56-94)||(47924369-47924407)
chr3 (56-94)||(50416483-50416521)
chr3 (56-94)||(50416567-50416605)
chr3 (56-94)||(51361526-51361564)
chr3 (56-88)||(17620739-17620771)
chr3 (74-110)||(54379190-54379226)
chr3 (74-113)||(2941926-2941965)
chr3 (74-113)||(9106294-9106333)
chr3 (74-113)||(10986379-10986418)
chr3 (56-94)||(33413907-33413946)
chr3 (56-94)||(8036992-8037030)
chr3 (56-94)||(12974015-12974053)
chr3 (56-94)||(12974194-12974231)
chr3 (56-94)||(19012565-19012603)
chr3 (56-94)||(21175271-21175309)
chr3 (56-94)||(36185729-36185767)
chr3 (56-94)||(41191412-41191450)
chr3 (56-94)||(47225851-47225889)
chr3 (74-108)||(51846785-51846819)
chr3 (56-85)||(27068535-27068564)
chr3 (61-94)||(30794857-30794890)
chr3 (76-113)||(47728417-47728454)
chr3 (76-113)||(53594997-53595034)
chr3 (62-94)||(23756300-23756332)
chr3 (74-110)||(30947914-30947950)
[»] chr4 (95 HSPs)
chr4 (58-145)||(26447380-26447467)
chr4 (56-144)||(27764248-27764336)
chr4 (56-144)||(36621670-36621758)
chr4 (56-143)||(45255983-45256070)
chr4 (56-140)||(22181218-22181302)
chr4 (56-144)||(38485643-38485727)
chr4 (74-140)||(4168384-4168450)
chr4 (61-143)||(21097153-21097235)
chr4 (77-144)||(637883-637950)
chr4 (46-144)||(51837060-51837157)
chr4 (56-113)||(50643751-50643808)
chr4 (78-134)||(50563708-50563764)
chr4 (56-113)||(29826606-29826663)
chr4 (81-138)||(6386516-6386573)
chr4 (77-124)||(1729604-1729651)
chr4 (56-94)||(638997-639035)
chr4 (56-94)||(10473651-10473689)
chr4 (56-94)||(11786107-11786145)
chr4 (56-94)||(11798274-11798312)
chr4 (56-94)||(13635620-13635658)
chr4 (56-94)||(15051031-15051069)
chr4 (56-94)||(22180209-22180247)
chr4 (56-94)||(26577264-26577302)
chr4 (56-94)||(30358840-30358878)
chr4 (56-94)||(30597832-30597870)
chr4 (56-94)||(45256898-45256936)
chr4 (56-94)||(49425952-49425990)
chr4 (56-94)||(49492407-49492445)
chr4 (56-94)||(50644673-50644711)
chr4 (74-113)||(1621902-1621941)
chr4 (74-113)||(11786001-11786040)
chr4 (74-113)||(11798168-11798207)
chr4 (74-113)||(13635725-13635764)
chr4 (74-113)||(15051136-15051175)
chr4 (74-113)||(30597726-30597765)
chr4 (74-113)||(36011870-36011909)
chr4 (74-113)||(46672466-46672505)
chr4 (74-113)||(49492512-49492551)
chr4 (74-113)||(51921265-51921304)
chr4 (56-94)||(1492675-1492713)
chr4 (56-94)||(2124347-2124385)
chr4 (56-94)||(6841824-6841862)
chr4 (56-94)||(8157292-8157330)
chr4 (56-94)||(8165765-8165803)
chr4 (56-94)||(17109921-17109959)
chr4 (56-94)||(21995673-21995711)
chr4 (56-94)||(25715646-25715684)
chr4 (56-94)||(30779346-30779384)
chr4 (56-94)||(31763111-31763149)
chr4 (56-94)||(33819694-33819732)
chr4 (56-94)||(36309419-36309457)
chr4 (56-94)||(36924244-36924282)
chr4 (56-94)||(37059714-37059752)
chr4 (62-96)||(48077862-48077896)
chr4 (56-94)||(53441453-53441491)
chr4 (56-94)||(53865246-53865284)
chr4 (56-94)||(54895586-54895624)
chr4 (57-94)||(51076901-51076938)
chr4 (62-94)||(48076921-48076953)
chr4 (74-110)||(49426060-49426096)
chr4 (62-94)||(51921166-51921198)
chr4 (74-113)||(10472524-10472563)
chr4 (74-113)||(25574128-25574167)
chr4 (78-113)||(27865737-27865772)
chr4 (74-113)||(35291548-35291587)
chr4 (74-113)||(55765508-55765547)
chr4 (56-94)||(562778-562816)
chr4 (56-94)||(2124548-2124586)
chr4 (56-94)||(9813148-9813186)
chr4 (56-94)||(12722941-12722979)
chr4 (56-94)||(17109722-17109760)
chr4 (56-94)||(21098135-21098173)
chr4 (56-94)||(25715730-25715768)
chr4 (56-94)||(27865632-27865670)
chr4 (74-108)||(30357834-30357868)
chr4 (56-94)||(31762932-31762970)
chr4 (56-94)||(33883297-33883335)
chr4 (56-94)||(33883486-33883524)
chr4 (64-94)||(35291451-35291481)
chr4 (56-94)||(36309620-36309658)
chr4 (56-94)||(38010713-38010751)
chr4 (56-94)||(43374450-43374488)
chr4 (56-94)||(43375524-43375562)
chr4 (56-94)||(54895407-54895445)
chr4 (56-85)||(12722740-12722769)
chr4 (56-93)||(14499254-14499291)
chr4 (56-93)||(29825717-29825754)
chr4 (57-94)||(42788678-42788715)
chr4 (56-93)||(50070722-50070759)
chr4 (56-93)||(55782641-55782678)
chr4 (56-93)||(55846821-55846858)
chr4 (77-113)||(26578189-26578225)
chr4 (56-92)||(33871283-33871319)
chr4 (62-94)||(50562679-50562711)
chr4 (74-110)||(53441347-53441383)
[»] chr5 (59 HSPs)
chr5 (47-144)||(28070122-28070219)
chr5 (56-144)||(13362778-13362866)
chr5 (56-134)||(25017196-25017274)
chr5 (56-144)||(23335676-23335764)
chr5 (47-145)||(34329126-34329224)
chr5 (74-144)||(16668763-16668833)
chr5 (77-144)||(2827036-2827103)
chr5 (77-144)||(18465525-18465592)
chr5 (70-120)||(42512221-42512271)
chr5 (56-94)||(3883930-3883968)
chr5 (56-94)||(14394601-14394639)
chr5 (56-94)||(14940251-14940289)
chr5 (56-94)||(26637732-26637770)
chr5 (74-140)||(33868182-33868248)
chr5 (74-113)||(13553010-13553049)
chr5 (74-113)||(14940356-14940395)
chr5 (74-113)||(15416691-15416730)
chr5 (56-94)||(3340593-3340631)
chr5 (56-94)||(11660985-11661023)
chr5 (56-94)||(13363797-13363835)
chr5 (56-94)||(13553116-13553154)
chr5 (56-94)||(15416797-15416835)
chr5 (56-94)||(15559052-15559090)
chr5 (56-94)||(22695543-22695581)
chr5 (56-94)||(23155528-23155566)
chr5 (56-94)||(30783590-30783628)
chr5 (56-94)||(37456813-37456851)
chr5 (56-94)||(39861783-39861821)
chr5 (76-113)||(26637837-26637874)
chr5 (62-94)||(16667667-16667699)
chr5 (74-113)||(14394495-14394534)
chr5 (74-113)||(30783462-30783501)
chr5 (74-113)||(37456707-37456746)
chr5 (56-94)||(703733-703771)
chr5 (74-112)||(4674987-4675025)
chr5 (56-94)||(5630274-5630312)
chr5 (56-94)||(11660796-11660834)
chr5 (56-94)||(16552250-16552288)
chr5 (56-94)||(20134202-20134240)
chr5 (56-94)||(20134402-20134440)
chr5 (56-94)||(20696330-20696368)
chr5 (56-94)||(22672000-22672038)
chr5 (56-94)||(22830791-22830829)
chr5 (56-94)||(23155846-23155884)
chr5 (56-94)||(23334714-23334751)
chr5 (56-90)||(23948588-23948622)
chr5 (56-94)||(25671291-25671329)
chr5 (56-94)||(28069250-28069288)
chr5 (56-94)||(35662070-35662108)
chr5 (56-94)||(35662236-35662274)
chr5 (56-94)||(39086520-39086558)
chr5 (56-94)||(39166343-39166381)
chr5 (56-94)||(39861582-39861620)
chr5 (88-144)||(8948930-8948984)
chr5 (56-93)||(25189825-25189862)
chr5 (56-85)||(25545584-25545613)
chr5 (74-110)||(3884038-3884074)
chr5 (74-110)||(16552642-16552678)
chr5 (56-84)||(39086719-39086747)
[»] scaffold0097 (1 HSPs)
scaffold0097 (56-144)||(13621-13709)
[»] chr6 (38 HSPs)
chr6 (56-144)||(33346340-33346428)
chr6 (56-144)||(34399649-34399737)
chr6 (62-144)||(29157240-29157322)
chr6 (47-144)||(15034944-15035041)
chr6 (78-144)||(24737660-24737726)
chr6 (77-144)||(18611218-18611285)
chr6 (56-106)||(12394387-12394437)
chr6 (56-123)||(35119247-35119310)
chr6 (56-94)||(6900936-6900974)
chr6 (56-94)||(7765407-7765445)
chr6 (56-94)||(15493307-15493345)
chr6 (56-94)||(34869958-34869996)
chr6 (74-113)||(1449569-1449608)
chr6 (74-113)||(1536896-1536935)
chr6 (74-113)||(6900830-6900869)
chr6 (74-113)||(31216689-31216728)
chr6 (56-94)||(878393-878431)
chr6 (56-94)||(1449675-1449713)
chr6 (56-94)||(7089215-7089253)
chr6 (56-94)||(10588956-10588994)
chr6 (56-94)||(19284374-19284412)
chr6 (56-94)||(21384992-21385030)
chr6 (56-94)||(22857491-22857529)
chr6 (56-94)||(30909442-30909480)
chr6 (56-93)||(18755666-18755703)
chr6 (74-113)||(7089109-7089148)
chr6 (86-144)||(877246-877304)
chr6 (56-94)||(10698580-10698618)
chr6 (56-94)||(14237781-14237819)
chr6 (56-94)||(19281286-19281324)
chr6 (56-94)||(20522851-20522889)
chr6 (56-94)||(22857680-22857718)
chr6 (56-94)||(25119109-25119147)
chr6 (56-94)||(25119473-25119511)
chr6 (74-108)||(30908679-30908713)
chr6 (56-93)||(28132783-28132820)
chr6 (62-94)||(18612365-18612397)
chr6 (62-94)||(29163720-29163752)
[»] scaffold0238 (1 HSPs)
scaffold0238 (43-140)||(25205-25302)
[»] scaffold0544 (1 HSPs)
scaffold0544 (56-140)||(10648-10732)
[»] scaffold0337 (1 HSPs)
scaffold0337 (56-140)||(7025-7109)
[»] scaffold0194 (2 HSPs)
scaffold0194 (56-144)||(27615-27703)
scaffold0194 (56-94)||(28678-28716)
[»] scaffold0189 (1 HSPs)
scaffold0189 (56-110)||(11193-11247)
[»] scaffold0571 (2 HSPs)
scaffold0571 (56-94)||(548-586)
scaffold0571 (74-113)||(676-715)
[»] scaffold0074 (1 HSPs)
scaffold0074 (56-94)||(24407-24445)
[»] scaffold0045 (2 HSPs)
scaffold0045 (74-113)||(33711-33750)
scaffold0045 (56-94)||(33817-33855)
[»] scaffold0516 (1 HSPs)
scaffold0516 (56-94)||(1251-1289)
[»] scaffold0338 (1 HSPs)
scaffold0338 (56-94)||(6516-6554)
[»] scaffold0249 (2 HSPs)
scaffold0249 (56-94)||(23547-23585)
scaffold0249 (56-94)||(23738-23776)
[»] scaffold0129 (1 HSPs)
scaffold0129 (56-94)||(20123-20161)
[»] scaffold0102 (1 HSPs)
scaffold0102 (56-94)||(33619-33657)
[»] scaffold0009 (2 HSPs)
scaffold0009 (56-94)||(51908-51946)
scaffold0009 (56-90)||(202915-202949)
[»] scaffold0050 (1 HSPs)
scaffold0050 (56-93)||(20980-21017)
[»] scaffold0581 (1 HSPs)
scaffold0581 (74-113)||(8421-8460)
[»] scaffold0004 (1 HSPs)
scaffold0004 (56-94)||(96002-96040)
[»] scaffold0455 (1 HSPs)
scaffold0455 (56-93)||(10689-10726)
[»] scaffold0221 (1 HSPs)
scaffold0221 (56-93)||(20487-20524)
[»] scaffold0154 (1 HSPs)
scaffold0154 (56-93)||(37483-37520)
[»] scaffold0019 (1 HSPs)
scaffold0019 (57-85)||(164070-164098)


Alignment Details
Target: chr2 (Bit Score: 105; Significance: 1e-52; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 56 - 200
Target Start/End: Complemental strand, 14551375 - 14551232
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttcaacaacttcat 155  Q
    ||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14551375 ttatggtgcataaggaaattcttatgcac-gtgcataaacacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttcaacaacttcat 14551277  T
Q  156 ttctctgttactgccagagatactctccggaatcctctctctgtt 200  Q
     |||||||||| ||| ||||||||| || ||||||||||||||||    
T  14551276 ctctctgttaccgccggagatactcaccagaatcctctctctgtt 14551232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 56 - 144
Target Start/End: Complemental strand, 18298168 - 18298080
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18298168 ttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 18298080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 25192900 - 25192988
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||    
T  25192900 ttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccattagatctagtgtacacgtgtaataattctaggcttc 25192988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 20709782 - 20709870
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||    
T  20709782 ttatggtgcataaggaaatccttatccaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctacgcttc 20709870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 4579865 - 4579786
Alignment:
Q  66 taaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttca 145  Q
    |||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| || ||||||    
T  4579865 taaggaaatccttatgcaccatgcataaacactttacaaccatcagatctagtgtacacgtgtaataatcttatgcttca 4579786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 25995313 - 25995381
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggct 142  Q
    |||||||||||  |||||||| || ||||||||||||||| ||||||||||||||||||||||||||||    
T  25995313 tccttatgcactctgcataaatacttcacaaccatcagatttagtgtacacgtgtaataatcctaggct 25995381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 4281811 - 4281761
Alignment:
Q  90 ataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctagg 140  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4281811 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctagg 4281761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 5098743 - 5098809
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctagg 140  Q
    |||||||||||| ||||||||||| |||||||||||| || || |||||||||||||||||||||||    
T  5098743 tccttatgcaccctgcataaacacttcacaaccatcaaatttattgtacacgtgtaataatcctagg 5098809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 1292074 - 1292112
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1292074 ttatggtgcataaggaaatccttatgcaccgtgcataaa 1292112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 7487149 - 7487187
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7487149 ttatggtgcataaggaaatccttatgcaccgtgcataaa 7487187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 39355206 - 39355168
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39355206 ttatggtgcataaggaaatccttatgcaccgtgcataaa 39355168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 41345090 - 41345128
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41345090 ttatggtgcataaggaaatccttatgcaccgtgcataaa 41345128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 7487326 - 7487254
Alignment:
Q  42 ttaataggcaaactttatggtgcataaggaaat-ccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||| |||||||  ||||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||    
T  7487326 ttaaaaggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagat 7487254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 15016605 - 15016566
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  15016605 tccttatgcaccgtgcataaacacatcacaaccatcagat 15016566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 39355062 - 39355101
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  39355062 tccttatgcaccgtgcataaacacatcacaaccatcagat 39355101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 15016461 - 15016499
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  15016461 ttatggtgcataaggaaattcttatgcaccgtgcataaa 15016499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 18297171 - 18297209
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  18297171 ttatggtgcatagggaaatccttatgcaccgtgcataaa 18297209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 19246665 - 19246703
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  19246665 ttatggtgcataaggaaatccttatgcaccctgcataaa 19246703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 20661399 - 20661437
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  20661399 ttatggtgcataaggaaatccttatgcaccctgcataaa 20661437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 24183638 - 24183600
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  24183638 ttatggtgcataaggaaatccttatgcaccctgcataaa 24183600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 25194032 - 25193994
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  25194032 ttatggtgcataatgaaatccttatgcaccgtgcataaa 25193994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 31783796 - 31783834
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  31783796 ttatggtgcataaggaaatccttatgcaccctgcataaa 31783834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 34464882 - 34464844
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  34464882 ttatggtccataaggaaatccttatgcaccgtgcataaa 34464844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 34726607 - 34726645
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  34726607 ttatggtgcataaggaaatccttatgcaccctgcataaa 34726645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 43822409 - 43822446
Alignment:
Q  103 aaccatcagatctagtgtacacgtgtaataatcctagg 140  Q
    |||||||||||||||||||||||||| |||||||||||    
T  43822409 aaccatcagatctagtgtacacgtgtgataatcctagg 43822446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 8150000 - 8149964
Alignment:
Q  58 atggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||| ||||||||    
T  8150000 atggtgcataaggaaatccttatgcaccatgcataaa 8149964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 8154624 - 8154588
Alignment:
Q  58 atggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||| ||||||||    
T  8154624 atggtgcataaggaaatccttatgcaccatgcataaa 8154588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 43823910 - 43823878
Alignment:
Q  62 tgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||    
T  43823910 tgcataaggaaatccttatgcaccgtgcataaa 43823878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 8149858 - 8149897
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  8149858 tccttatgcatcgtgcataaacacatcacaaccatcagat 8149897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 8154482 - 8154521
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  8154482 tccttatgcatcgtgcataaacacatcacaaccatcagat 8154521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 9143612 - 9143651
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||| ||||||||    
T  9143612 tccttatgcaccgtgcataaacacatcacaatcatcagat 9143651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 34464738 - 34464777
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  34464738 tccttatgcaccgtgcataaacatatcacaaccatcagat 34464777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 12449057 - 12449095
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  12449057 ttatggtgcataaggaaatccttatgcacactgcataaa 12449095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 12449284 - 12449246
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  12449284 ttatggtgcataaggaaatctttatgcaccttgcataaa 12449246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 16111746 - 16111708
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  16111746 ttatggtgcataaggaaatctttatgcaccctgcataaa 16111708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 108
Target Start/End: Original strand, 18762894 - 18762928
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccat 108  Q
    |||||||||||||||||||||||| ||||||||||    
T  18762894 tccttatgcaccgtgcataaacacatcacaaccat 18762928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 20661636 - 20661598
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  20661636 ttatggtgcataaggaaatcattatgcaccctgcataaa 20661598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 22596307 - 22596345
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||| ||||||||||||||||||||| ||||||||    
T  22596307 ttatggtgtataaggaaatccttatgcaccctgcataaa 22596345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 22596545 - 22596507
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  22596545 ttatggtgcataaggaaatccttatgtaccctgcataaa 22596507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 25575326 - 25575364
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  25575326 ttatggtgcataaggaaatccttatgcatcctgcataaa 25575364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 31711513 - 31711551
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  31711513 ttatggtgcataaggaaatccttatgtaccctgcataaa 31711551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 34726837 - 34726799
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  34726837 ttatggtgcataaggaaattcttatgcaccctgcataaa 34726799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 36636974 - 36636912
Alignment:
Q  76 cttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatccta 138  Q
    |||||| ||| | ||||||||| ||||||||||||||| |  | |||||||||||||||||||    
T  36636974 cttatgtaccctacataaacacttcacaaccatcagatttgttttacacgtgtaataatccta 36636912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 37867157 - 37867195
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  37867157 ttatggtgcataaggaaatccttatccaccctgcataaa 37867195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 94
Target Start/End: Complemental strand, 37867392 - 37867358
Alignment:
Q  60 ggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||| ||||||||    
T  37867392 ggtgcataaggaaatccttatgcaccctgcataaa 37867358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 42364495 - 42364533
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  42364495 ttatggtgcataagaaaatccttatgcaccctgcataaa 42364533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 42364734 - 42364696
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  42364734 ttatggtgcaaaaggaaatccttatgcaccctgcataaa 42364696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 44915532 - 44915494
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  44915532 ttatggtgcataaggaaatgcttatgcaccctgcataaa 44915494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 1292216 - 1292179
Alignment:
Q  76 cttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  1292216 cttatgcaccgtacataaacacatcacaaccatcagat 1292179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 15252847 - 15252880
Alignment:
Q  61 gtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||| ||||||||    
T  15252847 gtgcataaggaaatccttatgcaccctgcataaa 15252880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 85
Target Start/End: Complemental strand, 31784026 - 31783997
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcacc 85  Q
    ||||||||||||||||||||||||||||||    
T  31784026 ttatggtgcataaggaaatccttatgcacc 31783997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 2263603 - 2263635
Alignment:
Q  77 ttatgcaccgtgcataaacacgtcacaaccatc 109  Q
    ||||||||||||||||||||| |||||||||||    
T  2263603 ttatgcaccgtgcataaacacttcacaaccatc 2263635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 36635764 - 36635796
Alignment:
Q  62 tgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||| |||||||||||||||||||||||||    
T  36635764 tgcataaagaaatccttatgcaccgtgcataaa 36635796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 39548069 - 39548105
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatca 110  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  39548069 tccttatgcaccctgcataaacacttcacaaccatca 39548105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 56 - 144
Target Start/End: Complemental strand, 32987502 - 32987414
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32987502 ttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 32987414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 56 - 145
Target Start/End: Original strand, 1208717 - 1208806
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttca 145  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||    
T  1208717 ttatggtgcataaggaaatccttatgcaccgtgcataaacactttacaaccataagatctagtgtacacgtgtaataatcctaggcttca 1208806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 39021983 - 39022071
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||    
T  39021983 ttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaatcatcagatctagtgtacatgtgtaataatcctaggcttc 39022071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 7058122 - 7058210
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  7058122 ttatggtgcataaggaaatacttatgcaccgtgcataaacacttcacaaccatccgatctagtgtacacgtgtaataatcctagacttc 7058210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 56 - 143
Target Start/End: Complemental strand, 4836758 - 4836671
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggctt 143  Q
    ||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  4836758 ttatggtgcataaagaaatgcttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaagctt 4836671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 56 - 143
Target Start/End: Complemental strand, 4842203 - 4842116
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggctt 143  Q
    ||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  4842203 ttatggtgcataaagaaatgcttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaagctt 4842116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 8550530 - 8550600
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||    
T  8550530 tccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcataagcttc 8550600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 15260918 - 15260820
Alignment:
Q  47 aggcaaactttatggtgcataaggaaat-ccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||  ||||||||||||||||  | ||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||| |||||||    
T  15260918 aggcaaaagttatggtgcataaggattttccttatgcaccgtgcataaacacttcacaaccatcaaatctagtgtacacgtttaataatccaaggcttc 15260820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 73 - 144
Target Start/End: Original strand, 7614093 - 7614164
Alignment:
Q  73 atccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||    
T  7614093 atccttatgcaccatgcataaacacttcacaaccatcagatctaatgtacacgtgtaataatcataggcttc 7614164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 15181817 - 15181883
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctagg 140  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  15181817 tccttatgcaccctgcataaacacttcacaagcatcagatctagtgtacacgtgtaataatcttagg 15181883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 42433709 - 42433766
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  42433709 ttatggtgcataaggaaatccttatgcaccgtgcataagcacttcacaaccatcagat 42433766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 1149918 - 1149956
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1149918 ttatggtgcataaggaaatccttatgcaccgtgcataaa 1149956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 1209827 - 1209789
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1209827 ttatggtgcataaggaaatccttatgcaccgtgcataaa 1209789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 4835521 - 4835559
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4835521 ttatggtgcataaggaaatccttatgcaccgtgcataaa 4835559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 34633216 - 34633254
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34633216 ttatggtgcataaggaaatccttatgcaccgtgcataaa 34633254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 35301632 - 35301670
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  35301632 ttatggtgcataaggaaatccttatgcaccgtgcataaa 35301670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 39657711 - 39657749
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39657711 ttatggtgcataaggaaatccttatgcaccgtgcataaa 39657749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 41451102 - 41451171
Alignment:
Q  45 ataggcaaactttatggtgcataaggaaat-ccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||  ||||||||||||||  | | |||||||||||||||||||||||||||||| ||||||||    
T  41451102 ataggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacgtcacaatcatcagat 41451171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 10237381 - 10237420
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  10237381 tccttatgcaccgtgcataaacacatcacaaccatcagat 10237420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 19784298 - 19784337
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  19784298 tccttatgcaccgtgcataaacacatcacaaccatcagat 19784337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 30413941 - 30413980
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  30413941 tccttatgcaccgtgcataaacacatcacaaccatcagat 30413980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 34633360 - 34633321
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  34633360 tccttatgcaccgtgcataaacacatcacaaccatcagat 34633321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 41099209 - 41099248
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  41099209 tccttatgcaccgtgcataaacacatcacaaccatcagat 41099248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 43690667 - 43690706
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  43690667 tccttatgcaccgtgcataaacacatcacaaccatcagat 43690706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 1672972 - 1672934
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  1672972 ttatggtgcataaggaaatccttatgcaccctgcataaa 1672934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 7059206 - 7059168
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  7059206 ttatggtgcataaggaaatcattatgcaccgtgcataaa 7059168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 10237525 - 10237487
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  10237525 ttatggtgcataaggaaatccttatgcaccgtgtataaa 10237487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 15227201 - 15227163
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  15227201 ttatggtgcataaggaaatccttatgcaccgtacataaa 15227163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 15259858 - 15259896
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  15259858 ttatggggcataaggaaatccttatgcaccgtgcataaa 15259896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 17792933 - 17792895
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  17792933 ttatggtgcataaggaaatccttatgcaccctgcataaa 17792895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 23397484 - 23397446
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  23397484 ttatggtgcataaggaaatccttatgcaccatgcataaa 23397446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 27506709 - 27506747
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  27506709 ttatggtgcataaggaaatccttatgcaccctgcataaa 27506747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 30414085 - 30414047
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  30414085 ttatggtgcataaggaaatctttatgcaccgtgcataaa 30414047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 34647174 - 34647212
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  34647174 ttatggtgcataaggaaatccttatgcaccgtgtataaa 34647212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 35448651 - 35448613
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  35448651 ttatggtgcataaggaaatccttatgcaccctgcataaa 35448613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 110
Target Start/End: Complemental strand, 1150061 - 1150026
Alignment:
Q  75 ccttatgcaccgtgcataaacacgtcacaaccatca 110  Q
    ||||||||||||||||||||||| ||||||||||||    
T  1150061 ccttatgcaccgtgcataaacacatcacaaccatca 1150026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 91
Target Start/End: Complemental strand, 2751276 - 2751241
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcat 91  Q
    |||||||||||||| |||||||||||||||||||||    
T  2751276 ttatggtgcataagaaaatccttatgcaccgtgcat 2751241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 15227057 - 15227096
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  15227057 tccttatgcaccgtgcataaacacattacaaccatcagat 15227096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 40012239 - 40012180
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatct 115  Q
    ||||||||||||||||  |||||||||||| |||||||| || | ||||||||| |||||    
T  40012239 ttatggtgcataaggatttccttatgcaccatgcataaagactttacaaccatcggatct 40012180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 185884 - 185922
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  185884 ttatggtgcataaggaaatccttatgcactctgcataaa 185922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 94
Target Start/End: Original strand, 4840974 - 4841004
Alignment:
Q  64 cataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||    
T  4840974 cataaggaaatccttatgcaccgtgcataaa 4841004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 108
Target Start/End: Original strand, 9852297 - 9852331
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccat 108  Q
    |||||||||||||||||||||||| ||||||||||    
T  9852297 tccttatgcaccgtgcataaacacttcacaaccat 9852331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 10586102 - 10586064
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  10586102 ttatgatgcataaggaaatccttatgcaccctgcataaa 10586064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 15808888 - 15808926
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  15808888 ttatggtgcataagaaaatccttatgcaccctgcataaa 15808926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 15809881 - 15809843
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  15809881 ttatggtgcataaggaaatccttatgcaccctccataaa 15809843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 17656621 - 17656659
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  17656621 ttatggtgcataaggaaatccttatgcactctgcataaa 17656659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 18757369 - 18757331
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  18757369 ttatggtgcataaagaaatccttatgcaccctgcataaa 18757331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 21120195 - 21120233
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  21120195 ttatggtgcataatgaaatccttatgcaccatgcataaa 21120233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 23567489 - 23567527
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  23567489 ttatggtgcataaggaaatccttatgcactctgcataaa 23567527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 23567684 - 23567646
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  23567684 ttatggtgcataaggaaattcttatgcaccctgcataaa 23567646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 24473285 - 24473247
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| || |||||    
T  24473285 ttatggtgcataaggaaatccttatgcaccctgtataaa 24473247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 108
Target Start/End: Complemental strand, 34648167 - 34648133
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccat 108  Q
    |||||||||||||||||||||||| ||||||||||    
T  34648167 tccttatgcaccgtgcataaacacttcacaaccat 34648133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 40022391 - 40022429
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||||||| ||| |||||    
T  40022391 ttatggtgcataaggaaatccttatgcactgtgtataaa 40022429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 41451276 - 41451238
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  41451276 ttatggtgtataaggaaatccttatgcactgtgcataaa 41451238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 94
Target Start/End: Complemental strand, 1672803 - 1672774
Alignment:
Q  65 ataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||||||||    
T  1672803 ataaggaaatccttatgcaccgtgcataaa 1672774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 85
Target Start/End: Original strand, 18161291 - 18161320
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcacc 85  Q
    ||||||||||||||||||||||||||||||    
T  18161291 ttatggtgcataaggaaatccttatgcacc 18161320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 23396473 - 23396538
Alignment:
Q  44 aataggcaaactttatggtgcataaggaaat-ccttatgcaccgtgcataaacacgtcacaaccat 108  Q
    |||||| |||| ||||||||||||||  | | ||||||||||||||||||||||| | ||||||||    
T  23396473 aatagggaaacgttatggtgcataagccatttccttatgcaccgtgcataaacactttacaaccat 23396538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 40004721 - 40004758
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataa 93  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  40004721 ttatggtgcataaggatttccttatgcaccgtgcataa 40004758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 42434603 - 42434566
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataa 93  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  42434603 ttatggtgcataaggatttccttatgcaccgtgcataa 42434566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 28979291 - 28979323
Alignment:
Q  62 tgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||| ||||||||    
T  28979291 tgcataaggaaatccttatgcaccctgcataaa 28979323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 35302623 - 35302591
Alignment:
Q  76 cttatgcaccgtgcataaacacgtcacaaccat 108  Q
    |||||||||||||||||||||| ||||||||||    
T  35302623 cttatgcaccgtgcataaacacttcacaaccat 35302591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 40247324 - 40247288
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatca 110  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  40247324 tccttatgcaccctgcataaacacttcacaaccatca 40247288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 18056792 - 18056880
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18056792 ttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 18056880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 22348047 - 22348135
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  22348047 ttatggtgcataaggaaatccttatgcaccgcgcataaacacttcacaaccatcatatctagtgtacacgtgtaataatcctaggcttc 22348135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 16115865 - 16115939
Alignment:
Q  62 tgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcc 136  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  16115865 tgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcaaatctaatgtacacgtgtaataatcc 16115939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 57 - 144
Target Start/End: Original strand, 45889605 - 45889692
Alignment:
Q  57 tatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||||||||| ||||| |||||||||||||||  | |||||||||||||||||| |||| ||||||||||| ||||||||    
T  45889605 tatggtgcataaggaaattcttatccaccgtgcataaacattttacaaccatcagatctagtatacatgtgtaataatcttaggcttc 45889692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 35198220 - 35198155
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctag 139  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  35198220 tccttatgcaccctgcataaacacttcacagccatcagatctagtgtacacgtgtaataatcctag 35198155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 37639368 - 37639428
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataat 134  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37639368 tccttatgcaccctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataat 37639428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 56 - 144
Target Start/End: Complemental strand, 23320150 - 23320054
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcac--------cgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||||||||||||||||||||||| |        | ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  23320150 ttatggtgcataaggaaatccttatgctcttaggtatcatgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctagacttc 23320054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 136
Target Start/End: Original strand, 179646 - 179696
Alignment:
Q  86 gtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcc 136  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  179646 gtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcc 179696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 30802437 - 30802492
Alignment:
Q  89 cataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||    
T  30802437 cataaacatttcacaaccatcagatctagtgtacacgtgtaataatcttaggcttc 30802492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 8402337 - 8402284
Alignment:
Q  87 tgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctagg 140  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||    
T  8402337 tgcataaacacttcataaccatcagatctagtgtacacatgtaataatcctagg 8402284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 16976126 - 16976088
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16976126 ttatggtgcataaggaaatccttatgcaccgtgcataaa 16976088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 23817481 - 23817443
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23817481 ttatggtgcataaggaaatccttatgcaccgtgcataaa 23817443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 24636097 - 24636059
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24636097 ttatggtgcataaggaaatccttatgcaccgtgcataaa 24636059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 43452713 - 43452675
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43452713 ttatggtgcataaggaaatccttatgcaccgtgcataaa 43452675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 48762226 - 48762264
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48762226 ttatggtgcataaggaaatccttatgcaccgtgcataaa 48762264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 49936832 - 49936870
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  49936832 ttatggtgcataaggaaatccttatgcaccgtgcataaa 49936870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 23921955 - 23921898
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||| ||||||||||||||||||||||| ||||||||| ||| ||| |||||||||||    
T  23921955 ttattgtgcataaggaaatccttatgcatcgtgcataagcacttcataaccatcagat 23921898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 11421621 - 11421660
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  11421621 tccttatgcaccgtgcataaacacttcacaaccatcagat 11421660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 18618862 - 18618901
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  18618862 tccttatgcaccgtgcataaacacatcacaaccatcagat 18618901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 24635953 - 24635992
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  24635953 tccttatgcaccgtgcataaacacatcacaaccatcagat 24635992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 25889067 - 25889028
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  25889067 tccttatgcaccgtgcataaacacatcacaaccatcagat 25889028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 49936976 - 49936937
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  49936976 tccttatgcaccgtgcataaacacatcacaaccatcagat 49936937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 50351830 - 50351869
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  50351830 tccttatgcaccgtgcataaacacatcacaaccatcagat 50351869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 1395392 - 1395354
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  1395392 ttatggtgcataaggaaatccttatgcaccatgcataaa 1395354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 9628640 - 9628602
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  9628640 ttatggtgcataaggaaatccttatgcaccctgcataaa 9628602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 10974636 - 10974674
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  10974636 ttatggtgcataaggaaatccttatgcaccctgcataaa 10974674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 11422611 - 11422573
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  11422611 ttatggtgcataaggaaatccttatgcatcgtgcataaa 11422573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 14229175 - 14229213
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  14229175 ttatggtgcataaggaaatccttatgcaccctgcataaa 14229213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 17893075 - 17893113
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  17893075 ttatggtgcataaggaaatccttatgcaccctgcataaa 17893113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 17893314 - 17893276
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  17893314 ttatggtgcataaggaaatccttatgcaccctgcataaa 17893276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 18057850 - 18057812
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  18057850 ttatggtgtataaggaaatccttatgcaccgtgcataaa 18057812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 90
Target Start/End: Original strand, 19897655 - 19897689
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgca 90  Q
    |||||||||||||||||||||||||||||||||||    
T  19897655 ttatggtgcataaggaaatccttatgcaccgtgca 19897689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 21255843 - 21255881
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  21255843 ttatggtgcataaggaaatccttatacaccgtgcataaa 21255881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 23920974 - 23921012
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  23920974 ttatggtgcataaggaaatccttatgcatcgtgcataaa 23921012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 31084443 - 31084405
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  31084443 ttatggtgcataaggaaatccttatgtaccgtgcataaa 31084405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 33156995 - 33157033
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  33156995 ttatggtgcataaggaaatccttatgcaccctgcataaa 33157033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 42134174 - 42134136
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  42134174 ttatggtgcataaggaaatccttatgcaccctgcataaa 42134136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 45849111 - 45849149
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  45849111 ttatggtgcataaggaaatccttatgcaccctgcataaa 45849149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 9041092 - 9041055
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataa 93  Q
    |||||||||||||||||||||||||||||| |||||||    
T  9041092 ttatggtgcataaggaaatccttatgcaccctgcataa 9041055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 34369689 - 34369726
Alignment:
Q  76 cttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||| |||||||||||||||    
T  34369689 cttatgcaccgtgcataaacacttcacaaccatcagat 34369726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 4097947 - 4097911
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatca 110  Q
    |||||||||||||||||||||||| ||||||||||||    
T  4097947 tccttatgcaccgtgcataaacacttcacaaccatca 4097911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 18928783 - 18928819
Alignment:
Q  58 atggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||| ||||||||    
T  18928783 atggtgcataaggaaatccttatgcaccctgcataaa 18928819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 28375494 - 28375530
Alignment:
Q  77 ttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    ||||||||||||||||||||| |||||||||||||||    
T  28375494 ttatgcaccgtgcataaacacatcacaaccatcagat 28375530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 87
Target Start/End: Complemental strand, 6314287 - 6314256
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgt 87  Q
    ||||||||||||||||||||||||||||||||    
T  6314287 ttatggtgcataaggaaatccttatgcaccgt 6314256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 16975981 - 16976020
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  16975981 tccttatgcaccgtgtataaacacatcacaaccatcagat 16976020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 19897799 - 19897760
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  19897799 tccttatgcaccgtgcataaacatatcacaaccatcagat 19897760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 20434761 - 20434722
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  20434761 tccttatgcaccgtgcataaacacatcacaaccattagat 20434722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 31529704 - 31529665
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  31529704 tccttatgcaccatgcataaacacttcacaaccatcagat 31529665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 33097432 - 33097471
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  33097432 tccttatgcaccctgcataaacacttcacaaccatcagat 33097471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 43452569 - 43452608
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  43452569 tccttatgcaccgtgcataaacacatcacaactatcagat 43452608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 44260545 - 44260584
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  44260545 tccttatgcaccctgcataaacacttcacaaccatcagat 44260584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 48762370 - 48762331
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  48762370 tccttatgcaccgtgcataaacacatcacaaccattagat 48762331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 12070651 - 12070613
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  12070651 ttatggtgcataaggaaattcttatgcaccctgcataaa 12070613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 12796426 - 12796464
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  12796426 ttatggtgcataaggaaatccttctgcaccttgcataaa 12796464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 14229402 - 14229364
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  14229402 ttatggtgcataaggaaatctttatgcaccctgcataaa 14229364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 17811324 - 17811286
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| || |||||    
T  17811324 ttatggtgcataaggaaatccttatgcaccctgtataaa 17811286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 18619005 - 18618968
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  18619005 ttatggtgcataaggaa-tccttatgcaccgtgcataaa 18618968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 18928996 - 18928958
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  18928996 ttatggtgcataaggaaatctttatgcaccctgcataaa 18928958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 20434617 - 20434655
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  20434617 ttatggtgcataaggaaatcattatgcaccatgcataaa 20434655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 90
Target Start/End: Original strand, 21641597 - 21641631
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgca 90  Q
    ||||| |||||||||||||||||||||||||||||    
T  21641597 ttatgctgcataaggaaatccttatgcaccgtgca 21641631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 23174405 - 23174443
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  23174405 ttatggtgcataagaaaattcttatgcaccgtgcataaa 23174443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 23319018 - 23319056
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  23319018 ttatggtggataaggaaatccttatgcactgtgcataaa 23319056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 25888924 - 25888961
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  25888924 ttatggtgcataaggaa-tccttatgcaccgtgcataaa 25888961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 29945457 - 29945419
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  29945457 ttatggtgcataaggaaatccttatgcactctgcataaa 29945419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 31763778 - 31763816
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  31763778 ttatggtgcataaggaaatccttatacaccctgcataaa 31763816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 31764014 - 31763976
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  31764014 ttatggtgcataaggaaatccttatgcaccctacataaa 31763976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 32143810 - 32143772
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  32143810 ttatggtgcataaggaaatccttatgcactctgcataaa 32143772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 32595107 - 32595145
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  32595107 ttatggtgcataaggaaattcttatgcaccctgcataaa 32595145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 32595324 - 32595286
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  32595324 ttatggtgcataaggaaatccttatgcaccctgcttaaa 32595286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 42133947 - 42133985
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  42133947 ttatggtgcataaggaaatccttatgcatcctgcataaa 42133985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 45849350 - 45849312
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  45849350 ttatggtgcataaggaaattcttatgcaccctgcataaa 45849312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 45890634 - 45890596
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  45890634 ttatggtgtataagaaaatccttatgcaccgtgcataaa 45890596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 112
Target Start/End: Complemental strand, 51801772 - 51801734
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcaga 112  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  51801772 tccttatgcaccctgcataaacacttcacaaccatcaga 51801734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 14389852 - 14389885
Alignment:
Q  61 gtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||| ||||||||    
T  14389852 gtgcataaggaaatccttatgcaccctgcataaa 14389885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 19861754 - 19861717
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataa 93  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  19861754 ttatggtgcataaggatttccttatgcaccgtgcataa 19861717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 6314142 - 6314178
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatca 110  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  6314142 tccttatgcaccgtgcataaacacatcacagccatca 6314178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 21256809 - 21256777
Alignment:
Q  76 cttatgcaccgtgcataaacacgtcacaaccat 108  Q
    |||||||||||||||||||||| ||||||||||    
T  21256809 cttatgcaccgtgcataaacacttcacaaccat 21256777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 23175561 - 23175525
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatca 110  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  23175561 tccttatgcgccgtgcataaacacttcacaaccatca 23175525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 85
Target Start/End: Complemental strand, 41033302 - 41033274
Alignment:
Q  57 tatggtgcataaggaaatccttatgcacc 85  Q
    |||||||||||||||||||||||||||||    
T  41033302 tatggtgcataaggaaatccttatgcacc 41033274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 84
Target Start/End: Original strand, 49992521 - 49992549
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcac 84  Q
    |||||||||||||||||||||||||||||    
T  49992521 ttatggtgcataaggaaatccttatgcac 49992549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 3e-38; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 30428881 - 30428969
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  30428881 ttatggtgcataaggaaatccttatgcaccgtgcataaacatttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 30428969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 145
Target Start/End: Original strand, 48690903 - 48690992
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttca 145  Q
    ||||||||||||| |||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||| |||||||||    
T  48690903 ttatggtgcataaagaaatccttatgcaccgtgcataaacagttcacaaccatcaaatctagtgtacacgtgtaataatcataggcttca 48690992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 46024035 - 46024123
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  46024035 ttatggtgcacaagaaaatccttatgcaccgtgcataaacacttcacaaccatcagatatagtgtacacgtgtaataatcctagacttc 46024123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 143
Target Start/End: Complemental strand, 15974993 - 15974906
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggctt 143  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||| |||||||||| |||||||    
T  15974993 ttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcatatttagtgtacacatgtaataatcttaggctt 15974906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 62 - 145
Target Start/End: Original strand, 28396736 - 28396819
Alignment:
Q  62 tgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttca 145  Q
    |||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||| | |||||||||||||||||||    
T  28396736 tgcataaggaaatccttatgcaccgtgcataaacatttcacaatcatcagatctagtgtacaagagtaataatcctaggcttca 28396819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 5757413 - 5757483
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  5757413 tccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctagacttc 5757483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 56 - 141
Target Start/End: Original strand, 12279753 - 12279838
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggc 141  Q
    |||||||||||||||||||| |||||||||||||||||| || |||||||||| |||||||||||| ||||||||| |||||||||    
T  12279753 ttatggtgcataaggaaatctttatgcaccgtgcataaagacttcacaaccattagatctagtgtatacgtgtaatgatcctaggc 12279838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 46573537 - 46573469
Alignment:
Q  76 cttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  46573537 cttatgcaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 46573469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 56 - 141
Target Start/End: Original strand, 12279649 - 12279734
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggc 141  Q
    ||||||| |||||||||||| |||||||||||| ||||| || |||||||||| ||||| |||||||||||||||| |||||||||    
T  12279649 ttatggtacataaggaaatcattatgcaccgtgtataaagacttcacaaccattagatccagtgtacacgtgtaatgatcctaggc 12279734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 56 - 139
Target Start/End: Original strand, 48305245 - 48305327
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctag 139  Q
    ||||||||||||||||  |||||||||||||||||||||||| | |||| |||| |||||||||||||||| ||||||||||||    
T  48305245 ttatggtgcataaggat-tccttatgcaccgtgcataaacactttacaaacatcggatctagtgtacacgtataataatcctag 48305327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 48691030 - 48691089
Alignment:
Q  86 gtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttca 145  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  48691030 gtgcatagacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttca 48691089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 44141290 - 44141226
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatccta 138  Q
    |||||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  44141290 tccttatgcaccctgcataaacacttcacaaccatctgatttagtgtacacgtgtaataatccta 44141226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 33797966 - 33798027
Alignment:
Q  83 accgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||||||||||  |||||||||||||||||||| |||||||||||||||||||| ||||    
T  33797966 accgtgcataaacatttcacaaccatcagatctagtatacacgtgtaataatcctagacttc 33798027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 763724 - 763763
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  763724 tccttatgcaccgtgcataaacacgtcacaaccatcagat 763763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 32090607 - 32090674
Alignment:
Q  77 ttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||||| ||||||||||  ||| |||||||| ||||||| |||||||||||||||| ||||||||    
T  32090607 ttatgcaccctgcataaacaattcagaaccatcaaatctagtatacacgtgtaataatcataggcttc 32090674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 11732045 - 11732083
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11732045 ttatggtgcataaggaaatccttatgcaccgtgcataaa 11732083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 16933138 - 16933176
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16933138 ttatggtgcataaggaaatccttatgcaccgtgcataaa 16933176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 16938521 - 16938559
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16938521 ttatggtgcataaggaaatccttatgcaccgtgcataaa 16938559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 30884117 - 30884155
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30884117 ttatggtgcataaggaaatccttatgcaccgtgcataaa 30884155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 31660240 - 31660202
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31660240 ttatggtgcataaggaaatccttatgcaccgtgcataaa 31660202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 35737119 - 35737081
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  35737119 ttatggtgcataaggaaatccttatgcaccgtgcataaa 35737081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 41911007 - 41911045
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41911007 ttatggtgcataaggaaatccttatgcaccgtgcataaa 41911045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 46358516 - 46358586
Alignment:
Q  44 aataggcaaactttatggtgcataaggaaat-ccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    ||||||||||  ||||||||||||||  | | ||||||||||||||||||||||| |||||||||||||||    
T  46358516 aataggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 46358586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 46358691 - 46358653
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  46358691 ttatggtgcataaggaaatccttatgcaccgtgcataaa 46358653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 47340318 - 47340280
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47340318 ttatggtgcataaggaaatccttatgcaccgtgcataaa 47340280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 48692091 - 48692053
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48692091 ttatggtgcataaggaaatccttatgcaccgtgcataaa 48692053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 48830640 - 48830602
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48830640 ttatggtgcataaggaaatccttatgcaccgtgcataaa 48830602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 25778845 - 25778902
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||| |||| ||||||||| |||||||| ||| |||||||||||||||    
T  25778845 ttatggtgcataagaaaattcttatgcactgtgcataagcacttcacaaccatcagat 25778902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 16933283 - 16933244
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  16933283 tccttatgcaccgtgcataaacacatcacaaccatcagat 16933244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 16938666 - 16938627
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  16938666 tccttatgcaccgtgcataaacacatcacaaccatcagat 16938627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 30884261 - 30884222
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  30884261 tccttatgcaccgtgcataaacacatcacaaccatcagat 30884222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 31660096 - 31660135
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  31660096 tccttatgcaccgtgcataaacacatcacaaccatcagat 31660135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 41911148 - 41911109
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  41911148 tccttatgcaccgtgcataaacacatcacaaccatcagat 41911109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 763868 - 763830
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  763868 ttatggtgcataaggaaatccttatgcactgtgcataaa 763830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 15973863 - 15973901
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  15973863 ttatggtgcataaggaaatccttatgcaccatgcataaa 15973901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 26945755 - 26945717
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  26945755 ttatggtgcataaggaaatccttatgcaccctgcataaa 26945717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 32685847 - 32685885
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  32685847 ttatggtgcataaggaaatccttatacaccgtgcataaa 32685885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 34228608 - 34228646
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  34228608 ttatggtgcataagaaaatccttatgcaccgtgcataaa 34228646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 38837770 - 38837732
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  38837770 ttatggtgcataaggaaatccttatgcaccttgcataaa 38837732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 44426601 - 44426639
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  44426601 ttatggtgcataaggaaatccttatgcaccctgcataaa 44426639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 46004576 - 46004538
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  46004576 ttatggtgcataaggaaatccttatgcaccctgcataaa 46004538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 46025101 - 46025063
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  46025101 ttatggtgcataaggaaatccctatgcaccgtgcataaa 46025063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 46572577 - 46572615
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  46572577 ttatggtgcataaggaaatccttatgcaccatgcataaa 46572615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 20000711 - 20000674
Alignment:
Q  76 cttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||| |||||||||||||||    
T  20000711 cttatgcaccgtgcataaacacatcacaaccatcagat 20000674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 35736975 - 35737011
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatca 110  Q
    |||||||||||||||||||||||| ||||||||||||    
T  35736975 tccttatgcaccgtgcataaacacatcacaaccatca 35737011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 87
Target Start/End: Complemental strand, 33798774 - 33798743
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgt 87  Q
    ||||||||||||||||||||||||||||||||    
T  33798774 ttatggtgcataaggaaatccttatgcaccgt 33798743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 34875516 - 34875555
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  34875516 tccttatgcaccctgcataaacacttcacaaccatcagat 34875555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 94
Target Start/End: Original strand, 38837542 - 38837581
Alignment:
Q  55 tttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||| ||||||||||||||||| ||||||||    
T  38837542 tttatggtgcatacggaaatccttatgcaccctgcataaa 38837581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 7845138 - 7845100
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  7845138 ttatggtgcataaggaaatccttatgcaacctgcataaa 7845100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 24360796 - 24360758
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  24360796 ttatggtgcataaggaaatatttatgcaccgtgcataaa 24360758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 31365274 - 31365312
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  31365274 ttatggtgcataaggaaatccttatgcatcttgcataaa 31365312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 34227679 - 34227717
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  34227679 ttatggtgcataaggaaatccttatgcaacctgcataaa 34227717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 34227917 - 34227879
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  34227917 ttatggtgcataaggaaattcttatgcaccctgcataaa 34227879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 41066010 - 41065972
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  41066010 ttatggtgcataaggaaatccttatgtaccctgcataaa 41065972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 43742252 - 43742290
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  43742252 ttatggtgcataaggaaatccttatgcatcctgcataaa 43742290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 44426840 - 44426802
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  44426840 ttatggtgcataaggaaatctttatgcaccctgcataaa 44426802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 12286760 - 12286723
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataa 93  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  12286760 ttatggtgcataaggaaatctttatgcacagtgcataa 12286723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 27335665 - 27335625
Alignment:
Q  76 cttatgcaccgtgcataaacacgtcacaaccatcagatctag 117  Q
    |||||||||| ||||||||||| |||||||||||||||||||    
T  27335665 cttatgcacc-tgcataaacacttcacaaccatcagatctag 27335625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 26945517 - 26945553
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcata 92  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  26945517 ttatggtgcataaggaaattcttatgcaccctgcata 26945553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 39007688 - 39007652
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatca 110  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  39007688 tccttatgcaccctgcataaacacttcacaaccatca 39007652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 50754014 - 50754102
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  50754014 ttatggtacataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 50754102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 56 - 144
Target Start/End: Complemental strand, 51362495 - 51362407
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  51362495 ttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtaataatcctaggcttc 51362407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 52987702 - 52987619
Alignment:
Q  61 gtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  52987702 gtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 52987619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 19385381 - 19385284
Alignment:
Q  47 aggcaaactttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||    
T  19385381 aggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtaataattctaggcttc 19385284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 144
Target Start/End: Complemental strand, 7045357 - 7045269
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  7045357 ttatggtgcataaggaaattcttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataatcgtaggcttc 7045269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 8718109 - 8718197
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| ||||||||||||||||||||    
T  8718109 ttatggtgcataaggaaatccttatgcaccgtacataaatacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttc 8718197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 9069996 - 9070084
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| ||||||||||||||||||||    
T  9069996 ttatggtgcataaggaaatccttatgcaccgtacataaatacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttc 9070084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 144
Target Start/End: Complemental strand, 16277471 - 16277383
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  16277471 ttatggtgcataaggaaatctttatgcaccgtgcataaacacttcacaaccatcatatctagtgtacacgtgtaataatcctacgcttc 16277383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 39099223 - 39099293
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  39099223 tccttatgcaccgtgcataaatatttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 39099293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 23699356 - 23699423
Alignment:
Q  76 cttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggctt 143  Q
    ||||| |||| ||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  23699356 cttatacaccctgcataaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggctt 23699423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 23717811 - 23717878
Alignment:
Q  76 cttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggctt 143  Q
    ||||| |||| ||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  23717811 cttatacaccctgcataaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggctt 23717878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 23736267 - 23736334
Alignment:
Q  76 cttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggctt 143  Q
    ||||| |||| ||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  23736267 cttatacaccctgcataaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggctt 23736334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 140
Target Start/End: Complemental strand, 17627258 - 17627204
Alignment:
Q  86 gtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctagg 140  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  17627258 gtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattctagg 17627204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 2941821 - 2941859
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2941821 ttatggtgcataaggaaatccttatgcaccgtgcataaa 2941859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 3475302 - 3475340
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3475302 ttatggtgcataaggaaatccttatgcaccgtgcataaa 3475340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 6097579 - 6097617
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6097579 ttatggtgcataaggaaatccttatgcaccgtgcataaa 6097617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 8719178 - 8719140
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8719178 ttatggtgcataaggaaatccttatgcaccgtgcataaa 8719140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 9071065 - 9071027
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9071065 ttatggtgcataaggaaatccttatgcaccgtgcataaa 9071027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 9106438 - 9106400
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9106438 ttatggtgcataaggaaatccttatgcaccgtgcataaa 9106400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 9595875 - 9595913
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9595875 ttatggtgcataaggaaatccttatgcaccgtgcataaa 9595913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 10986523 - 10986485
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10986523 ttatggtgcataaggaaatccttatgcaccgtgcataaa 10986485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 19284842 - 19284804
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19284842 ttatggtgcataaggaaatccttatgcaccgtgcataaa 19284804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 30947806 - 30947844
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30947806 ttatggtgcataaggaaatccttatgcaccgtgcataaa 30947844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 34562402 - 34562440
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34562402 ttatggtgcataaggaaatccttatgcaccgtgcataaa 34562440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 50755233 - 50755195
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  50755233 ttatggtgcataaggaaatccttatgcaccgtgcataaa 50755195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 54379333 - 54379295
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  54379333 ttatggtgcataaggaaatccttatgcaccgtgcataaa 54379295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 3475446 - 3475407
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  3475446 tccttatgcaccgtgcataaacacatcacaaccatcagat 3475407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 9596019 - 9595980
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  9596019 tccttatgcaccgtgcataaacacatcacaaccatcagat 9595980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 19284698 - 19284737
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  19284698 tccttatgcaccgtgcataaacacatcacaaccatcagat 19284737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 26662577 - 26662538
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  26662577 tccttatgcaccgtgcataaacacatcacaaccatcagat 26662538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 33414052 - 33414013
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  33414052 tccttatgcaccgtgcataaacacatcacaaccatcagat 33414013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 46237797 - 46237758
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  46237797 tccttatgcaccgtgcataaacacatcacaaccatcagat 46237758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 47335059 - 47335098
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  47335059 tccttatgcaccgtgcataaacacatcacaaccatcagat 47335098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 8036803 - 8036841
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  8036803 ttatggtgcataaggaaatccttatgcaccctgcataaa 8036841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 16276672 - 16276710
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  16276672 ttatggtgcataaagaaatccttatgcaccgtgcataaa 16276710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 19384384 - 19384422
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  19384384 ttatggtgcataaggaaattcttatgcaccgtgcataaa 19384422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 26662433 - 26662471
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  26662433 ttatggtgcataaggaaatccttatgcactgtgcataaa 26662471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 26960797 - 26960759
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  26960797 ttatggtgcataaggaaatctttatgcaccgtgcataaa 26960759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 27446254 - 27446216
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  27446254 ttatggtgcataaggaaatccttatgcaccttgcataaa 27446216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 36185946 - 36185908
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  36185946 ttatggtgcataaggaaatccttatgcaccctgcataaa 36185908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 46237653 - 46237691
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  46237653 ttatggtgcataaggaaatccttatacaccgtgcataaa 46237691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 47924407 - 47924369
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  47924407 ttatggtgcataaggaaatccttatgcaccctgcataaa 47924369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 50416483 - 50416521
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  50416483 ttatggtgcataaggaaatccttatgcaccctgcataaa 50416521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 50416605 - 50416567
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  50416605 ttatggtgcataaggaaatccttatgcaccctgcataaa 50416567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 51361526 - 51361564
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  51361526 ttatggtgcataaggaaatccttatgcaccgtgtataaa 51361564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 17620739 - 17620771
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtg 88  Q
    |||||||||||||||||||||||||||||||||    
T  17620739 ttatggtgcataaggaaatccttatgcaccgtg 17620771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 54379190 - 54379226
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatca 110  Q
    |||||||||||||||||||||||| ||||||||||||    
T  54379190 tccttatgcaccgtgcataaacacatcacaaccatca 54379226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 2941965 - 2941926
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||| ||||||||||||||| |||||||||||||||    
T  2941965 tccttatgtaccgtgcataaacacatcacaaccatcagat 2941926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 9106294 - 9106333
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  9106294 tccttatgcaccgtgcataaacacattacaaccatcagat 9106333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 10986379 - 10986418
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  10986379 tccttatgcaccgtgcataaacacatcataaccatcagat 10986418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 33413907 - 33413946
Alignment:
Q  56 ttatggtgcataaggaaat-ccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  33413907 ttatggtgcataaggaaatcccttatgcaccgtgcataaa 33413946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 8037030 - 8036992
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  8037030 ttatggtgcatgaggaaatccttatgcaccctgcataaa 8036992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 12974015 - 12974053
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  12974015 ttatggtgcataaggaaatccttatgcaccctgcctaaa 12974053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 12974231 - 12974194
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  12974231 ttatggtgcataaggaaatccttatgcacc-tgcataaa 12974194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 19012603 - 19012565
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  19012603 ttatggtgcataaggaaattcttatgcaccctgcataaa 19012565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 21175309 - 21175271
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  21175309 ttatggtgcatgaggaaatccttatgcaccctgcataaa 21175271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 36185729 - 36185767
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  36185729 ttatggtgcataaggaaatccttatgcatcctgcataaa 36185767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 41191412 - 41191450
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  41191412 ttatggtgcatagggaaattcttatgcaccgtgcataaa 41191450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 47225889 - 47225851
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  47225889 ttatggtgcataaggaaatccttatgtaccctgcataaa 47225851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 108
Target Start/End: Complemental strand, 51846819 - 51846785
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccat 108  Q
    |||||||||||||||||||||||| ||||||||||    
T  51846819 tccttatgcaccgtgcataaacacttcacaaccat 51846785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 85
Target Start/End: Original strand, 27068535 - 27068564
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcacc 85  Q
    ||||||||||||||||||||||||||||||    
T  27068535 ttatggtgcataaggaaatccttatgcacc 27068564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 30794857 - 30794890
Alignment:
Q  61 gtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||| ||||||||    
T  30794857 gtgcataaggaaatccttatgcaccctgcataaa 30794890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 47728417 - 47728454
Alignment:
Q  76 cttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  47728417 cttatgcaccctgcataaacacttcacaaccatcagat 47728454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 53594997 - 53595034
Alignment:
Q  76 cttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  53594997 cttatgcaccctgcataaacacttcacaaccatcagat 53595034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 23756332 - 23756300
Alignment:
Q  62 tgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||||| |||||    
T  23756332 tgcataaggaaatccttatgcaccgtggataaa 23756300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 30947950 - 30947914
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatca 110  Q
    |||||||||||||||||||||||| |||||| |||||    
T  30947950 tccttatgcaccgtgcataaacacatcacaatcatca 30947914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 95)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 26447467 - 26447380
Alignment:
Q  58 atggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttca 145  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  26447467 atggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttca 26447380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 27764248 - 27764336
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||    
T  27764248 ttatggtgcataaggaaatccttatgcaccgtgcataaacacttcgcaaccatcagatctagtgtacacgtgtaataatcctacgcttc 27764336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 56 - 144
Target Start/End: Complemental strand, 36621758 - 36621670
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||    
T  36621758 ttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctaatgtacacgtgtaataatcctatgcttc 36621670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 56 - 143
Target Start/End: Original strand, 45255983 - 45256070
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggctt 143  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||    
T  45255983 ttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaactatcagatatagtgtacacgtgtaataatcctaggctt 45256070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 140
Target Start/End: Complemental strand, 22181302 - 22181218
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctagg 140  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||    
T  22181302 ttatggtgcataaggaaatccttatgcaccgtgcataaaaacttcacaaccatcagatttagtgtacacgtgtaataatcctagg 22181218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 56 - 144
Target Start/End: Complemental strand, 38485727 - 38485643
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||||||||    ||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||    
T  38485727 ttatggtgcataaggaa----ttatgcaccgtgcataaacgcttcacaaccatcagatctaatgtacacgtgtaataatcctaggcttc 38485643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 4168384 - 4168450
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctagg 140  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  4168384 tccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctagg 4168450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 61 - 143
Target Start/End: Original strand, 21097153 - 21097235
Alignment:
Q  61 gtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggctt 143  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||| ||||||||||||||| ||| ||||    
T  21097153 gtgcataaggaaatccttatgcaccgtgtataaacacttcacaaccattagatctagtttacacgtgtaataattctaagctt 21097235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 637883 - 637950
Alignment:
Q  77 ttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||  ||||||||    
T  637883 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacatgtgtaataattttaggcttc 637950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 46 - 144
Target Start/End: Complemental strand, 51837157 - 51837060
Alignment:
Q  46 taggcaaactttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||||  |||||||| ||||| |||||||||| || || ||||||| || ||||||||||||||| || |||||||||||||||||||||||||||    
T  51837157 taggcaaaagttatggtgtataagaaaatccttat-catcgagcataaatacttcacaaccatcagatttaatgtacacgtgtaataatcctaggcttc 51837060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 50643751 - 50643808
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  50643751 ttatggtgcataaggaaatccttatgcaccgtgcataaacacttcataaccatcagat 50643808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 50563764 - 50563708
Alignment:
Q  78 tatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataat 134  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  50563764 tatgcaccctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataat 50563708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 29826663 - 29826606
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  29826663 ttatggtacataaggaaatccttatgcaccgtgcataagcacttcacaaccatcagat 29826606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 6386573 - 6386516
Alignment:
Q  81 gcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatccta 138  Q
    ||||| ||||||||||| ||||||||||||||| ||||| ||||||||||||||||||    
T  6386573 gcaccctgcataaacacttcacaaccatcagatttagtggacacgtgtaataatccta 6386516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 1729651 - 1729604
Alignment:
Q  77 ttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacac 124  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||    
T  1729651 ttatacaccgtgcataaacacttcacaaccatcagatctagtgtacac 1729604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 639035 - 638997
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  639035 ttatggtgcataaggaaatccttatgcaccgtgcataaa 638997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 10473689 - 10473651
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10473689 ttatggtgcataaggaaatccttatgcaccgtgcataaa 10473651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 11786145 - 11786107
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11786145 ttatggtgcataaggaaatccttatgcaccgtgcataaa 11786107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 11798312 - 11798274
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11798312 ttatggtgcataaggaaatccttatgcaccgtgcataaa 11798274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 13635620 - 13635658
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13635620 ttatggtgcataaggaaatccttatgcaccgtgcataaa 13635658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 15051031 - 15051069
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15051031 ttatggtgcataaggaaatccttatgcaccgtgcataaa 15051069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 22180209 - 22180247
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22180209 ttatggtgcataaggaaatccttatgcaccgtgcataaa 22180247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 26577264 - 26577302
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26577264 ttatggtgcataaggaaatccttatgcaccgtgcataaa 26577302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 30358878 - 30358840
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30358878 ttatggtgcataaggaaatccttatgcaccgtgcataaa 30358840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 30597870 - 30597832
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30597870 ttatggtgcataaggaaatccttatgcaccgtgcataaa 30597832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 45256936 - 45256898
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  45256936 ttatggtgcataaggaaatccttatgcaccgtgcataaa 45256898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 49425952 - 49425990
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  49425952 ttatggtgcataaggaaatccttatgcaccgtgcataaa 49425990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 49492407 - 49492445
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  49492407 ttatggtgcataaggaaatccttatgcaccgtgcataaa 49492445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 50644711 - 50644673
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  50644711 ttatggtgcataaggaaatccttatgcaccgtgcataaa 50644673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 1621902 - 1621941
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  1621902 tccttatgcaccgtgcataaacacatcacaaccatcagat 1621941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 11786001 - 11786040
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  11786001 tccttatgcaccgtgcataaacacatcacaaccatcagat 11786040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 11798168 - 11798207
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  11798168 tccttatgcaccgtgcataaacacatcacaaccatcagat 11798207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 13635764 - 13635725
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  13635764 tccttatgcaccgtgcataaacacatcacaaccatcagat 13635725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 15051175 - 15051136
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  15051175 tccttatgcaccgtgcataaacacatcacaaccatcagat 15051136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 30597726 - 30597765
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  30597726 tccttatgcaccgtgcataaacacatcacaaccatcagat 30597765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 36011870 - 36011909
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  36011870 tccttatgcaccgtgcataaacacatcacaaccatcagat 36011909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 46672466 - 46672505
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  46672466 tccttatgcaccgtgcataaacacatcacaaccatcagat 46672505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 49492551 - 49492512
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  49492551 tccttatgcaccgtgcataaacacatcacaaccatcagat 49492512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 51921304 - 51921265
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  51921304 tccttatgcaccgtgcataaacacatcacaaccatcagat 51921265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 1492675 - 1492713
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  1492675 ttatggtgcataaggaaatccttatgcaccctgcataaa 1492713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 2124347 - 2124385
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  2124347 ttatggtgcataaggaaatccttatgcaccctgcataaa 2124385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 6841824 - 6841862
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  6841824 ttatggtgcataaggaaatccttatgcaccctgcataaa 6841862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 8157330 - 8157292
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  8157330 ttatggtgcataaggaaatccttatgcaccctgcataaa 8157292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 8165765 - 8165803
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  8165765 ttatggtgcataaggaaatccttatgcaccctgcataaa 8165803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 17109959 - 17109921
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  17109959 ttatggtgcataaggaaatccttatgcaccctgcataaa 17109921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 21995673 - 21995711
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  21995673 ttatggtgcataaggaaatccttatgcaccctgcataaa 21995711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 25715646 - 25715684
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  25715646 ttatggtgcataaggaaatccttatgcaccctgcataaa 25715684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 30779346 - 30779384
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  30779346 ttatggtgcataaggaaatccttatgcaccttgcataaa 30779384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 31763149 - 31763111
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  31763149 ttatggtgcataaggaaatccttatgcaccctgcataaa 31763111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 33819694 - 33819732
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  33819694 ttatggtgcataaggaaatccttatgcaccctgcataaa 33819732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 36309419 - 36309457
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  36309419 ttatggtgcataaggaaatccttatgcaccctgcataaa 36309457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 36924244 - 36924282
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  36924244 ttatggtgcataaggaaatccttatgcaccctgcataaa 36924282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 37059714 - 37059752
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  37059714 ttatggtgcataaggaaatccttatgcaccttgcataaa 37059752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 48077896 - 48077862
Alignment:
Q  62 tgcataaggaaatccttatgcaccgtgcataaaca 96  Q
    |||||||||||||||||||||||||||||||||||    
T  48077896 tgcataaggaaatccttatgcaccgtgcataaaca 48077862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 53441491 - 53441453
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  53441491 ttatggtgcataaggaaatccttatgcaccgggcataaa 53441453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 53865284 - 53865246
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  53865284 ttatggtgcataaggaaatccttatgcaccctgcataaa 53865246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 54895624 - 54895586
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  54895624 ttatggtgcataaggaaatccttatgcaccctgcataaa 54895586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 94
Target Start/End: Original strand, 51076901 - 51076938
Alignment:
Q  57 tatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  51076901 tatggtgcataaggaaatccttatgcaccctgcataaa 51076938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 48076921 - 48076953
Alignment:
Q  62 tgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||    
T  48076921 tgcataaggaaatccttatgcaccgtgcataaa 48076953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 49426096 - 49426060
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatca 110  Q
    |||||||||||||||||||||||| ||||||||||||    
T  49426096 tccttatgcaccgtgcataaacacatcacaaccatca 49426060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 51921166 - 51921198
Alignment:
Q  62 tgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||    
T  51921166 tgcataaggaaatccttatgcaccgtgcataaa 51921198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 10472524 - 10472563
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  10472524 tccttatgcaccgtgcataaacatttcacaaccatcagat 10472563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 25574167 - 25574128
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  25574167 tccttatgcaccctgcataaacacttcacaaccatcagat 25574128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 113
Target Start/End: Complemental strand, 27865772 - 27865737
Alignment:
Q  78 tatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||| |||||||||||||||    
T  27865772 tatgcaccgtgcataaacacatcacaaccatcagat 27865737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 35291587 - 35291548
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  35291587 tccttatgcaccgtgcataaacacatcacaaccataagat 35291548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 55765508 - 55765547
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  55765508 tccttatgcaccgtgcataaacacattacaaccatcagat 55765547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 562778 - 562816
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||| |||||||| ||||||||    
T  562778 ttatggtgcataaggaaatccctatgcaccctgcataaa 562816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 2124586 - 2124548
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  2124586 ttatggtgcataaggaaattcttatgcaccctgcataaa 2124548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 9813186 - 9813148
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  9813186 ttatggtgcataaggaaatctttatgcaccctgcataaa 9813148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 12722979 - 12722941
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  12722979 ttatggtgcataaggaaattcttatgcaccctgcataaa 12722941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 17109722 - 17109760
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  17109722 ttatggtgcataaggaaatccttatgtaccttgcataaa 17109760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 21098173 - 21098135
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||| ||||||||||||||||||||| ||||||||    
T  21098173 ttatggtgtataaggaaatccttatgcaccatgcataaa 21098135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 25715768 - 25715730
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  25715768 ttatggtgcataagaaaatccttatgcaccctgcataaa 25715730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 27865632 - 27865670
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||| ||||||||||||||||||||| ||||||||    
T  27865632 ttatggtgtataaggaaatccttatgcaccatgcataaa 27865670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 108
Target Start/End: Original strand, 30357834 - 30357868
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccat 108  Q
    |||||||||||||||||||||||| ||||||||||    
T  30357834 tccttatgcaccgtgcataaacacttcacaaccat 30357868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 31762932 - 31762970
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  31762932 ttatggtgcataaggaaatccttatgcatcctgcataaa 31762970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 33883297 - 33883335
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| || |||||    
T  33883297 ttatggtgcataaggaaatccttatgcaccctgtataaa 33883335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 33883524 - 33883486
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  33883524 ttatggtgcataaggaaatcattatgcaccctgcataaa 33883486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 94
Target Start/End: Original strand, 35291451 - 35291481
Alignment:
Q  64 cataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||    
T  35291451 cataaggaaatccttatgcaccgtgcataaa 35291481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 36309658 - 36309620
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  36309658 ttatggtgcataagaaaatccttatgcaccctgcataaa 36309620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 38010751 - 38010713
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  38010751 ttatggtgcatacggaaatccttatgcaccctgcataaa 38010713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 43374450 - 43374488
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  43374450 ttatggtgcataaggaaatccttatgtaccctgcataaa 43374488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 43375562 - 43375524
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  43375562 ttatggtgcatacggaaatccttatgcaccctgcataaa 43375524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 54895407 - 54895445
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  54895407 ttatggtgcataagaaaatccttatgcaccctgcataaa 54895445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 85
Target Start/End: Original strand, 12722740 - 12722769
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcacc 85  Q
    ||||||||||||||||||||||||||||||    
T  12722740 ttatggtgcataaggaaatccttatgcacc 12722769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 14499254 - 14499291
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataa 93  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  14499254 ttatggtgcataaggatttccttatgcaccgtgcataa 14499291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 29825717 - 29825754
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataa 93  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  29825717 ttatggtgcataaggatttccttatgcaccgtgcataa 29825754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 57 - 94
Target Start/End: Complemental strand, 42788715 - 42788678
Alignment:
Q  57 tatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  42788715 tatggtgcataaggaaatccttatgcatcctgcataaa 42788678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 50070722 - 50070759
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataa 93  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  50070722 ttatggtgcataaggatttccttatgcaccgtgcataa 50070759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 55782678 - 55782641
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataa 93  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  55782678 ttatggtgcataaggatttccttatgcaccgtgcataa 55782641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 55846858 - 55846821
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataa 93  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  55846858 ttatggtgcataaggatttccttatgcaccgtgcataa 55846821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 26578225 - 26578189
Alignment:
Q  77 ttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  26578225 ttatgcatcgtgcataaacacttcacaaccatcagat 26578189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 33871319 - 33871283
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcata 92  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  33871319 ttatgatgcataaggaaatccttatgcaccctgcata 33871283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 50562679 - 50562711
Alignment:
Q  62 tgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||| ||||||||||    
T  50562679 tgcataaggaaatccttatgcatcgtgcataaa 50562711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 53441347 - 53441383
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatca 110  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  53441347 tccttatgcatcgtgcataaacacatcacaaccatca 53441383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 28070219 - 28070122
Alignment:
Q  47 aggcaaactttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||    
T  28070219 aggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaactatcagatctagtgtacacgtgtaataatcctagacttc 28070122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 13362778 - 13362866
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  13362778 ttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtatacgtgtaataatcataggcttc 13362866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 25017274 - 25017196
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataat 134  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25017274 ttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataat 25017196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 144
Target Start/End: Complemental strand, 23335764 - 23335676
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||    
T  23335764 ttatggtgcataaggaaatccgtatgcaccgtgcataaacatttcacaaccatcagatctagtgtacacgtgtaataatcataggcttc 23335676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 34329126 - 34329224
Alignment:
Q  47 aggcaaactttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttca 145  Q
    |||||||  |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||| |||||||||    
T  34329126 aggcaaaagttatggtgcataaggaaatctttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgaataataatcataggcttca 34329224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 16668833 - 16668763
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16668833 tccttatgcaccctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 16668763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 2827103 - 2827036
Alignment:
Q  77 ttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||| |||||||||||||||| | ||||||||||||||||||||||||||||||| ||| ||||||||    
T  2827103 ttatccaccgtgcataaacactttacaaccatcagatctagtgtacacgtgtaattatcttaggcttc 2827036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 18465592 - 18465525
Alignment:
Q  77 ttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  18465592 ttatgcatcctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcttagacttc 18465525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 42512221 - 42512271
Alignment:
Q  70 gaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgt 120  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  42512221 gaaatccttatccaccgtgcataaacacttcacaaccatcagatctagtgt 42512271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 3883930 - 3883968
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3883930 ttatggtgcataaggaaatccttatgcaccgtgcataaa 3883968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 14394639 - 14394601
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14394639 ttatggtgcataaggaaatccttatgcaccgtgcataaa 14394601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 14940251 - 14940289
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14940251 ttatggtgcataaggaaatccttatgcaccgtgcataaa 14940289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 26637732 - 26637770
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26637732 ttatggtgcataaggaaatccttatgcaccgtgcataaa 26637770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 33868182 - 33868248
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctagg 140  Q
    |||||||||||| ||||||||||| ||||||||||| ||| || | |||| ||||||||||||||||    
T  33868182 tccttatgcaccctgcataaacacttcacaaccatctgatttattttacatgtgtaataatcctagg 33868248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 13553010 - 13553049
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  13553010 tccttatgcaccgtgcataaacacatcacaaccatcagat 13553049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 14940395 - 14940356
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  14940395 tccttatgcaccgtgcataaacacatcacaaccatcagat 14940356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 15416691 - 15416730
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  15416691 tccttatgcaccgtgcataaacacatcacaaccatcagat 15416730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 3340593 - 3340631
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  3340593 ttatggtgcataaggaaatccttatgcaccctgcataaa 3340631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 11661023 - 11660985
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  11661023 ttatggtgcataaggaaatccttatgcaccctgcataaa 11660985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 13363835 - 13363797
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  13363835 ttatggtgcacaaggaaatccttatgcaccgtgcataaa 13363797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 13553154 - 13553116
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  13553154 ttatggtgcataaggaaatccttatgcaccgtgtataaa 13553116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 15416835 - 15416797
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  15416835 ttatgatgcataaggaaatccttatgcaccgtgcataaa 15416797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 15559052 - 15559090
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  15559052 ttatggtgcataaggaaatccttatgcaccatgcataaa 15559090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 22695581 - 22695543
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  22695581 ttatggtgcataaggaaatccttatgcaccttgcataaa 22695543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 23155528 - 23155566
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  23155528 ttatggtgcataaggaaatccttatgcaccctgcataaa 23155566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 30783628 - 30783590
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  30783628 ttatgatgcataaggaaatccttatgcaccgtgcataaa 30783590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 37456851 - 37456813
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  37456851 ttatggtgcataaggaaatccttatgcaccatgcataaa 37456813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 39861821 - 39861783
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  39861821 ttatggtgcataaggaaatccttatgcaccctgcataaa 39861783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 26637874 - 26637837
Alignment:
Q  76 cttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||| |||||||||||||||    
T  26637874 cttatgcaccgtgcataaacacatcacaaccatcagat 26637837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 16667667 - 16667699
Alignment:
Q  62 tgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||    
T  16667667 tgcataaggaaatccttatgcaccgtgcataaa 16667699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 14394495 - 14394534
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    ||||||||||||||||||||| || |||||||||||||||    
T  14394495 tccttatgcaccgtgcataaatacatcacaaccatcagat 14394534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 30783462 - 30783501
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  30783462 tccttatgcaccgtgcataaacacatcgcaaccatcagat 30783501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 37456707 - 37456746
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  37456707 tccttatgcaccgtacataaacacatcacaaccatcagat 37456746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 703733 - 703771
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  703733 ttatggtgcataaggaaatccttatgcatcctgcataaa 703771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 112
Target Start/End: Original strand, 4674987 - 4675025
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcaga 112  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  4674987 tccttatgcaccctgcataaacacttcacaaccatcaga 4675025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 5630312 - 5630274
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  5630312 ttatggtgcatgaggaaatccttatgcaccctgcataaa 5630274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 11660796 - 11660834
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  11660796 ttatggtgcataaggaaatccttatgcaccctacataaa 11660834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 16552250 - 16552288
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||| |||||||| ||||||||    
T  16552250 ttatggtgcataaggaaatccgtatgcaccctgcataaa 16552288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 20134202 - 20134240
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  20134202 ttatggtgcataaggaaatccttatgcagcctgcataaa 20134240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 20134440 - 20134402
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  20134440 ttatggtgcataaggaaatccttatgcactctgcataaa 20134402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 20696368 - 20696330
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  20696368 ttatggtgcataaggaaatccttattcaccctgcataaa 20696330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 22672038 - 22672000
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  22672038 ttatggtgcataaggaaatccttatgcatcctgcataaa 22672000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 22830829 - 22830791
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  22830829 ttatggtgcataaggaaatccttatgcacactgcataaa 22830791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 23155884 - 23155846
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  23155884 ttatggtgcataatgaaatccttatgcaccttgcataaa 23155846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 23334714 - 23334751
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  23334714 ttatggtgcataaggaaat-cttatgcaccgtgcataaa 23334751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 90
Target Start/End: Complemental strand, 23948622 - 23948588
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgca 90  Q
    |||||||||||||| ||||||||||||||||||||    
T  23948622 ttatggtgcataagaaaatccttatgcaccgtgca 23948588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 25671329 - 25671291
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  25671329 ttatggtgcataaggaaatccttatgtaccatgcataaa 25671291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 28069250 - 28069288
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  28069250 ttatggtgtataaggaaatccttatgcaccgagcataaa 28069288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 35662070 - 35662108
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  35662070 ttatggtgcataaggaaatccttatgcaccctacataaa 35662108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 35662274 - 35662236
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  35662274 ttatggtgcataaggaaatacttatgcaccctgcataaa 35662236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 39086520 - 39086558
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  39086520 ttatggtgcataagaaaatccttatgcaccctgcataaa 39086558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 39166381 - 39166343
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  39166381 ttatggtgcataagaaaatccttatgcaccctgcataaa 39166343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 39861582 - 39861620
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  39861582 ttatggggcataaggaaatccttatgcaccctgcataaa 39861620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 8948930 - 8948984
Alignment:
Q  88 gcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||| ||| ||| ||||||| |||||||||||||  |||||||||||||||    
T  8948930 gcataaacacttcaaaactatcagatttagtgtacacgtg--ataatcctaggcttc 8948984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 25189825 - 25189862
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataa 93  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  25189825 ttatggtgcataaggatttccttatgcaccgtgcataa 25189862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 85
Target Start/End: Complemental strand, 25545613 - 25545584
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcacc 85  Q
    ||||||||||||||||||||||||||||||    
T  25545613 ttatggtgcataaggaaatccttatgcacc 25545584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 3884074 - 3884038
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatca 110  Q
    |||||||||||||||||||||||| | ||||||||||    
T  3884074 tccttatgcaccgtgcataaacacattacaaccatca 3884038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 16552678 - 16552642
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatca 110  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  16552678 tccttatgcaccatgcataaacacttcacaaccatca 16552642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 84
Target Start/End: Complemental strand, 39086747 - 39086719
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcac 84  Q
    |||||||||||||||||||||||||||||    
T  39086747 ttatggtgcataaggaaatccttatgcac 39086719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 13621 - 13709
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||    
T  13621 ttatggtgcataaggaaatccttatccaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctacgcttc 13709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 144
Target Start/End: Complemental strand, 33346428 - 33346340
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||  ||||||||    
T  33346428 ttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcaaatctagtgtacacgtgtaataattataggcttc 33346340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 34399649 - 34399737
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  34399649 ttatggtgcataaggaaatccttatgcaccgtatataaacacttcacaatcatcagatctagtgtacacgtgtaataatcctaggcttc 34399737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 29157240 - 29157322
Alignment:
Q  62 tgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||    
T  29157240 tgcacaaggaaatccttatgcaccgtgcataaacactttacaaccatcagatctagtgtacacgtgtaataatactaggcttc 29157322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 15035041 - 15034944
Alignment:
Q  47 aggcaaactttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||| ||||||||||| ||||||||    
T  15035041 aggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaatcattcacaaccatcagatctagtgtacatgtgtaataatcataggcttc 15034944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 24737726 - 24737660
Alignment:
Q  78 tatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24737726 tatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 24737660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 18611218 - 18611285
Alignment:
Q  77 ttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  18611218 ttatgcactctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcataggcttc 18611285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 12394437 - 12394387
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaacc 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12394437 ttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaacc 12394387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 35119247 - 35119310
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtaca 123  Q
    ||||||||||||||    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35119247 ttatggtgcataag----tccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtaca 35119310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 6900974 - 6900936
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6900974 ttatggtgcataaggaaatccttatgcaccgtgcataaa 6900936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 7765445 - 7765407
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7765445 ttatggtgcataaggaaatccttatgcaccgtgcataaa 7765407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 15493345 - 15493307
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15493345 ttatggtgcataaggaaatccttatgcaccgtgcataaa 15493307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 34869958 - 34869996
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34869958 ttatggtgcataaggaaatccttatgcaccgtgcataaa 34869996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 1449569 - 1449608
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  1449569 tccttatgcaccgtgcataaacacatcacaaccatcagat 1449608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 1536935 - 1536896
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  1536935 tccttatgcaccgtgcataaacacatcacaaccatcagat 1536896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 6900830 - 6900869
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  6900830 tccttatgcaccgtgcataaacacatcacaaccatcagat 6900869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 31216689 - 31216728
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  31216689 tccttatgcaccgtgcataaacacatcacaaccatcagat 31216728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 878431 - 878393
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  878431 ttatggtgcataaggaaatccttatgtaccgtgcataaa 878393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 1449713 - 1449675
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  1449713 ttatggtgcataagaaaatccttatgcaccgtgcataaa 1449675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 7089253 - 7089215
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  7089253 ttatggtgcataaggaaatccttatgtaccgtgcataaa 7089215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 10588994 - 10588956
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  10588994 ttatggtgcataaggaaatccttatgcaccctgcataaa 10588956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 19284374 - 19284412
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  19284374 ttatggtgcataaggaaatccttatgcaccctgcataaa 19284412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 21385030 - 21384992
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  21385030 ttatggtgcataaggaaatccttatgcaccctgcataaa 21384992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 22857491 - 22857529
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  22857491 ttatggtgcataaggaaatccttatgcaccctgcataaa 22857529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 30909480 - 30909442
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  30909480 ttatggtgcataaggaattccttatgcaccgtgcataaa 30909442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 18755666 - 18755703
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataa 93  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  18755666 ttatggtgcataaggaaatccttatgcacggtgcataa 18755703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 7089109 - 7089148
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||| ||||||||    
T  7089109 tccttatgcaccgtgcataaacacatcacaatcatcagat 7089148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 877246 - 877304
Alignment:
Q  86 gtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    |||||||||||| |||||||||| |||||  |||||||||| |||||||| || |||||    
T  877246 gtgcataaacacttcacaaccattagatcaggtgtacacgtataataatcataagcttc 877304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 10698580 - 10698618
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  10698580 ttatggtgcataaggaaatccttgtgcaccctgcataaa 10698618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 14237781 - 14237819
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  14237781 ttatggtgcataaggaaatccttatgcaccctacataaa 14237819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 19281286 - 19281324
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  19281286 ttatggtgcataaggaaatccttgtgcaccctgcataaa 19281324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 20522889 - 20522851
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  20522889 ttatggtgcataaggaaatccttatgcaccctacataaa 20522851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 22857718 - 22857680
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  22857718 ttatggtgcataagaaaatccttatgcaccctgcataaa 22857680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 25119109 - 25119147
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  25119109 ttatggtgcataaggaaattcttatgcaccctgcataaa 25119147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 25119511 - 25119473
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  25119511 ttatggtgcataaggaaatccttatgcagcctgcataaa 25119473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 108
Target Start/End: Original strand, 30908679 - 30908713
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccat 108  Q
    |||||||||||||||||||||||| ||||||||||    
T  30908679 tccttatgcaccgtgcataaacacttcacaaccat 30908713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 28132820 - 28132783
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataa 93  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  28132820 ttatggtgcataaggatttccttatgcaccgtgcataa 28132783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 18612397 - 18612365
Alignment:
Q  62 tgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||| ||||||    
T  18612397 tgcataaggaaatccttatgcaccgtacataaa 18612365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 29163752 - 29163720
Alignment:
Q  62 tgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||| |||||||||||||||||||    
T  29163752 tgcataaggaaattcttatgcaccgtgcataaa 29163720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 25302 - 25205
Alignment:
Q  43 taataggcaaactttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctagg 140  Q
    |||| ||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| ||||    
T  25302 taattggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtcataatcttagg 25205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 56 - 140
Target Start/End: Complemental strand, 10732 - 10648
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctagg 140  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||  |||||||||||||||    
T  10732 ttatggtgcataaggaaatccttatacaccgtgcataaacacttcacaaccatcagatctagtgtgcatatgtaataatcctagg 10648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 7025 - 7109
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctagg 140  Q
    ||||||||||||| |||||| |||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  7025 ttatggtgcataacgaaatctttatacaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctagg 7109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 27615 - 27703
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 144  Q
    ||||||||||||||||||  |||||| ||||||||||||||| ||||||| || ||||||||||||||||||||||||| |||||||||    
T  27615 ttatggtgcataaggaaaaacttatgtaccgtgcataaacacttcacaactataagatctagtgtacacgtgtaataattctaggcttc 27703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 28716 - 28678
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  28716 ttatggtgcataaggaaatccttttgcaccgtgcttaaa 28678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 11247 - 11193
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaacacgtcacaaccatca 110  Q
    ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||    
T  11247 ttatggtgcataaggaaatccttatgcactgtgcataagcacttcacaaccatca 11193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 548 - 586
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  548 ttatggtgcataaggaaatccttatgcaccgtgcataaa 586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 715 - 676
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  715 tccttatgcaccgtgcataaacacatcacaaccatcagat 676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 24445 - 24407
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24445 ttatggtgcataaggaaatccttatgcaccgtgcataaa 24407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 33711 - 33750
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  33711 tccttatgcaccgtgcataaacacatcacaaccatcagat 33750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 33855 - 33817
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  33855 ttatggtgcataaggaaatctttatgcaccgtgcataaa 33817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 1289 - 1251
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  1289 ttatggtgcataaggaaatccttatgcaccctgcataaa 1251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 6554 - 6516
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  6554 ttatggtgcataaggaaatccttatgcaccatgcataaa 6516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 23547 - 23585
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  23547 ttatggtgcataaggaaatccttatgcaccctgcataaa 23585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 23776 - 23738
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  23776 ttatggtgcataaggaaatccttatgcaccctgcataaa 23738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 20161 - 20123
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  20161 ttatggtgcataaggaaatccttatgcaccctgcataaa 20123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 33619 - 33657
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  33619 ttatggtgcataaggaaatccttatgcaccctgcataaa 33657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 51908 - 51946
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  51908 ttatggtgcataaggaaatccttatgcaccctgcataaa 51946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 90
Target Start/End: Original strand, 202915 - 202949
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgca 90  Q
    |||||||||||||||||||| ||||||||||||||    
T  202915 ttatggtgcataaggaaatcattatgcaccgtgca 202949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 20980 - 21017
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataa 93  Q
    |||||||||||||| |||||||||||||||||||||||    
T  20980 ttatggtgcataagaaaatccttatgcaccgtgcataa 21017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 8460 - 8421
Alignment:
Q  74 tccttatgcaccgtgcataaacacgtcacaaccatcagat 113  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  8460 tccttatgcactgtgcataaacacatcacaaccatcagat 8421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 96002 - 96040
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataaa 94  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  96002 ttatggtgcataagaaaatccttatgcaccctgcataaa 96040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 10726 - 10689
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataa 93  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  10726 ttatggtgcataaggatttccttatgcaccgtgcataa 10689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 20487 - 20524
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataa 93  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  20487 ttatggtgcataaggatttccttatgcaccgtgcataa 20524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 37520 - 37483
Alignment:
Q  56 ttatggtgcataaggaaatccttatgcaccgtgcataa 93  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  37520 ttatggtgcataaggatttccttatgcaccgtgcataa 37483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 85
Target Start/End: Complemental strand, 164098 - 164070
Alignment:
Q  57 tatggtgcataaggaaatccttatgcacc 85  Q
    |||||||||||||||||||||||||||||    
T  164098 tatggtgcataaggaaatccttatgcacc 164070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University