View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11386A_low_62 (Length: 405)
Name: NF11386A_low_62
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11386A_low_62 |
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Alignment Details
Target: chr4 (Bit Score: 367; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 7 - 385
Target Start/End: Original strand, 46477522 - 46477900
Alignment:
| Q |
7 |
gtagcatagactaaatatgtacattctgattaattgtctgataattatgtaattaattgattaattattcatgctatttgattgttgtagactttgtaga |
106 |
Q |
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| T |
46477522 |
gtagtatagactaaatatgtacattctgattaattgtctgataattatgtaattaattgattaattattcatgctatttgattgttgtagactttgtaga |
46477621 |
T |
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| Q |
107 |
acatagcaaagtggaatatgatatgattttgatagtttcgaggggttgtgtttccgacatttccctgtgttcatatgtggagaaatacctttgtgatgga |
206 |
Q |
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| T |
46477622 |
acatagcaaagtggaatatgatatgattttgatagtttcgaggggttgtgtttccgacatttccttgtgttcatatgtggagaaatacctttgtgatgga |
46477721 |
T |
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| Q |
207 |
attagtattgtttgtttctgggattttgaccaaattcttgttacagctgtgatagtagtggaatttagattattttaatttaattgattgaaatattact |
306 |
Q |
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| T |
46477722 |
attagtattgtttgtttctgggattttgaccaaattcttgttacagctgtgatagtagtggaatttagattattttaatttaattgatggaaatattact |
46477821 |
T |
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| Q |
307 |
gtataatgtggttattgttttatatatttgtcaaataatgtgcgtgctaagcgtgtagtgatgaaggggtattagtaat |
385 |
Q |
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| T |
46477822 |
gtataatgtggttattgttttatatatttgtcaaataatgtgcgtgctaagcgtgtagtgatgaaggggtattagtaat |
46477900 |
T |
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