View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11386A_low_8 (Length: 520)

Name: NF11386A_low_8
Description: NF11386A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11386A_low_8
NF11386A_low_8
[»] chr1 (101 HSPs)
chr1 (8-511)||(22819289-22819795)
chr1 (11-504)||(29651681-29652175)
chr1 (11-504)||(47098560-47099049)
chr1 (11-504)||(47102574-47103066)
chr1 (25-475)||(13598298-13598748)
chr1 (47-502)||(19072799-19073255)
chr1 (47-502)||(19120689-19121145)
chr1 (47-327)||(32889485-32889762)
chr1 (47-306)||(40816586-40816844)
chr1 (47-504)||(47703705-47704163)
chr1 (47-327)||(9476307-9476586)
chr1 (11-327)||(21536305-21536620)
chr1 (25-327)||(3281754-3282055)
chr1 (108-504)||(16124348-16124743)
chr1 (25-504)||(26644646-26645123)
chr1 (11-327)||(13604357-13604674)
chr1 (8-229)||(9022638-9022857)
chr1 (11-327)||(37069816-37070129)
chr1 (47-190)||(27104175-27104317)
chr1 (221-468)||(9023784-9024023)
chr1 (189-367)||(17345432-17345607)
chr1 (38-327)||(19358604-19358894)
chr1 (38-327)||(19361193-19361483)
chr1 (38-168)||(19366068-19366200)
chr1 (38-327)||(24202529-24202820)
chr1 (160-295)||(35109423-35109556)
chr1 (189-309)||(32736909-32737029)
chr1 (25-142)||(10925075-10925194)
chr1 (169-298)||(10997031-10997159)
chr1 (224-313)||(11032268-11032357)
chr1 (227-300)||(8550867-8550941)
chr1 (102-235)||(11031302-11031433)
chr1 (7-142)||(44454994-44455131)
chr1 (189-318)||(918392-918522)
chr1 (26-140)||(3189184-3189300)
chr1 (26-140)||(3198001-3198117)
chr1 (26-140)||(3206840-3206956)
chr1 (230-327)||(27104333-27104423)
chr1 (288-504)||(775543-775757)
chr1 (121-327)||(19379917-19380123)
chr1 (225-300)||(40122278-40122354)
chr1 (225-300)||(50169290-50169366)
chr1 (65-142)||(834364-834440)
chr1 (226-300)||(10925236-10925311)
chr1 (66-142)||(4552834-4552909)
chr1 (63-127)||(17345350-17345414)
chr1 (227-300)||(45644434-45644509)
chr1 (225-300)||(31659250-31659326)
chr1 (225-300)||(47255420-47255496)
chr1 (252-318)||(48382457-48382523)
chr1 (65-142)||(197105-197181)
chr1 (65-142)||(13138171-13138247)
chr1 (25-142)||(28220423-28220542)
chr1 (25-142)||(28223618-28223737)
chr1 (25-142)||(31659090-31659209)
chr1 (415-504)||(40816870-40816959)
chr1 (227-300)||(196988-197062)
chr1 (227-300)||(834247-834321)
chr1 (126-313)||(8281378-8281563)
chr1 (65-142)||(41360807-41360886)
chr1 (227-300)||(41360928-41361002)
chr1 (25-136)||(3156718-3156831)
chr1 (7-142)||(23555462-23555599)
chr1 (226-290)||(34603589-34603654)
chr1 (225-300)||(15820319-15820395)
chr1 (225-300)||(19754507-19754583)
chr1 (108-142)||(28265751-28265785)
chr1 (227-290)||(37168311-37168375)
chr1 (65-142)||(3847318-3847394)
chr1 (228-290)||(7482321-7482384)
chr1 (227-301)||(11348712-11348787)
chr1 (223-300)||(13138056-13138133)
chr1 (25-142)||(30476645-30476764)
chr1 (65-142)||(45644552-45644628)
chr1 (227-300)||(193625-193699)
chr1 (227-300)||(3156879-3156953)
chr1 (227-300)||(4552717-4552791)
chr1 (227-300)||(13547169-13547243)
chr1 (227-300)||(28220306-28220380)
chr1 (227-300)||(42298055-42298129)
chr1 (227-300)||(46064932-46065006)
chr1 (227-300)||(49918364-49918438)
chr1 (25-140)||(20762524-20762641)
chr1 (227-295)||(44455174-44455243)
chr1 (233-284)||(22079336-22079388)
chr1 (225-300)||(23555345-23555421)
chr1 (227-294)||(29136261-29136329)
chr1 (225-300)||(31925787-31925863)
chr1 (227-300)||(37559948-37560023)
chr1 (227-290)||(47115185-47115249)
chr1 (108-142)||(50167372-50167406)
chr1 (108-141)||(13659534-13659567)
chr1 (227-293)||(36683704-36683771)
chr1 (25-142)||(37503751-37503870)
chr1 (69-97)||(2263220-2263248)
chr1 (227-300)||(3847201-3847275)
chr1 (108-140)||(13316517-13316549)
chr1 (227-300)||(13549080-13549154)
chr1 (227-300)||(19752700-19752774)
chr1 (227-300)||(28265634-28265708)
chr1 (25-97)||(49918201-49918276)
[»] chr2 (89 HSPs)
chr2 (7-489)||(40014812-40015291)
chr2 (7-504)||(15903620-15904118)
chr2 (11-504)||(33528359-33528847)
chr2 (63-475)||(2869481-2869892)
chr2 (26-327)||(21629989-21630292)
chr2 (26-327)||(14698759-14699058)
chr2 (47-504)||(31055913-31056370)
chr2 (11-504)||(33118007-33118497)
chr2 (11-504)||(34388730-34389213)
chr2 (11-327)||(17865249-17865566)
chr2 (25-504)||(20522091-20522570)
chr2 (11-504)||(13569199-13569692)
chr2 (11-318)||(10706987-10707294)
chr2 (47-504)||(8039931-8040391)
chr2 (7-327)||(8389880-8390201)
chr2 (67-475)||(39482830-39483237)
chr2 (63-365)||(2837816-2838117)
chr2 (11-504)||(23078206-23078698)
chr2 (47-511)||(34682103-34682567)
chr2 (26-327)||(28258927-28259228)
chr2 (11-504)||(36757497-36757987)
chr2 (63-325)||(35397560-35397817)
chr2 (187-507)||(27149205-27149525)
chr2 (47-186)||(10445240-10445379)
chr2 (43-172)||(40739033-40739162)
chr2 (109-327)||(18674235-18674452)
chr2 (7-327)||(3491796-3492118)
chr2 (227-504)||(10445394-10445671)
chr2 (189-365)||(1345454-1345628)
chr2 (109-283)||(28770608-28770781)
chr2 (63-163)||(1344333-1344435)
chr2 (260-504)||(16940193-16940435)
chr2 (260-504)||(17010858-17011100)
chr2 (38-160)||(25409842-25409966)
chr2 (47-135)||(42269605-42269696)
chr2 (25-142)||(39284737-39284856)
chr2 (227-300)||(11151671-11151745)
chr2 (227-300)||(11690515-11690589)
chr2 (227-288)||(14202497-14202559)
chr2 (227-300)||(42362366-42362440)
chr2 (225-300)||(723824-723900)
chr2 (38-145)||(11098684-11098793)
chr2 (65-284)||(3278090-3278307)
chr2 (65-142)||(33162647-33162723)
chr2 (227-300)||(14633906-14633980)
chr2 (28-140)||(36988274-36988388)
chr2 (25-140)||(2334616-2334733)
chr2 (225-300)||(11067317-11067393)
chr2 (227-327)||(42039619-42039720)
chr2 (65-142)||(11151788-11151864)
chr2 (65-142)||(11690396-11690472)
chr2 (227-293)||(24885675-24885742)
chr2 (65-142)||(42362247-42362323)
chr2 (227-300)||(34139851-34139925)
chr2 (227-295)||(33162535-33162604)
chr2 (248-300)||(36773596-36773650)
chr2 (37-276)||(41586312-41586549)
chr2 (225-300)||(1631812-1631888)
chr2 (38-168)||(9296159-9296292)
chr2 (38-145)||(14291719-14291828)
chr2 (411-504)||(14699128-14699224)
chr2 (25-139)||(38312092-38312208)
chr2 (65-142)||(723941-724017)
chr2 (228-327)||(25398541-25398641)
chr2 (228-327)||(25403679-25403779)
chr2 (228-327)||(25407668-25407768)
chr2 (65-142)||(34139968-34140044)
chr2 (227-300)||(29867883-29867957)
chr2 (227-300)||(45726943-45727017)
chr2 (25-140)||(5723453-5723570)
chr2 (108-142)||(14202604-14202638)
chr2 (225-300)||(17057449-17057525)
chr2 (225-300)||(17085432-17085508)
chr2 (108-142)||(29867806-29867840)
chr2 (225-300)||(36318089-36318165)
chr2 (108-142)||(36773499-36773533)
chr2 (227-294)||(42288196-42288264)
chr2 (26-140)||(45099608-45099724)
chr2 (225-300)||(45099767-45099843)
chr2 (255-284)||(16388449-16388478)
chr2 (222-327)||(27139848-27139953)
chr2 (108-140)||(4484529-4484561)
chr2 (108-140)||(4503331-4503363)
chr2 (25-53)||(6595294-6595322)
chr2 (114-142)||(11067248-11067276)
chr2 (114-142)||(14634023-14634051)
chr2 (223-292)||(17450601-17450670)
chr2 (114-142)||(24885604-24885632)
chr2 (227-300)||(38312254-38312328)
[»] chr7 (96 HSPs)
chr7 (11-511)||(3047115-3047617)
chr7 (11-501)||(20283963-20284451)
chr7 (25-504)||(46516056-46516537)
chr7 (47-501)||(23402786-23403236)
chr7 (12-475)||(2647433-2647894)
chr7 (47-445)||(5817042-5817438)
chr7 (13-504)||(33332187-33332676)
chr7 (7-504)||(2580259-2580755)
chr7 (11-504)||(4796404-4796896)
chr7 (37-504)||(29159674-29160142)
chr7 (47-504)||(9189779-9190233)
chr7 (47-255)||(9184947-9185153)
chr7 (125-327)||(55993-56195)
chr7 (114-504)||(49091533-49091920)
chr7 (90-289)||(9235398-9235596)
chr7 (114-327)||(35960862-35961074)
chr7 (11-327)||(2479382-2479698)
chr7 (11-169)||(21989110-21989270)
chr7 (223-504)||(28617172-28617454)
chr7 (47-187)||(47263851-47263990)
chr7 (47-164)||(44847898-44848015)
chr7 (11-142)||(49091918-49092051)
chr7 (38-168)||(18413843-18413975)
chr7 (38-168)||(21640013-21640145)
chr7 (38-168)||(21646211-21646343)
chr7 (118-327)||(21983330-21983539)
chr7 (38-168)||(18408967-18409099)
chr7 (25-105)||(79654-79736)
chr7 (38-168)||(1533201-1533334)
chr7 (26-142)||(43864097-43864215)
chr7 (228-327)||(44848636-44848735)
chr7 (11-142)||(1113495-1113628)
chr7 (227-291)||(24525985-24526051)
chr7 (7-142)||(48489265-48489402)
chr7 (7-142)||(48491413-48491550)
chr7 (226-300)||(23565141-23565217)
chr7 (65-142)||(24526094-24526170)
chr7 (227-300)||(2361052-2361126)
chr7 (227-300)||(29608751-29608825)
chr7 (227-300)||(38671302-38671376)
chr7 (225-300)||(41649091-41649166)
chr7 (227-300)||(48599414-48599488)
chr7 (225-300)||(2390294-2390370)
chr7 (9-138)||(6570430-6570561)
chr7 (25-142)||(18126496-18126615)
chr7 (25-142)||(30024929-30025048)
chr7 (65-142)||(38671419-38671495)
chr7 (25-142)||(47676333-47676452)
chr7 (227-300)||(3259009-3259083)
chr7 (227-300)||(6431985-6432059)
chr7 (227-300)||(22269987-22270061)
chr7 (227-296)||(25615867-25615937)
chr7 (227-300)||(31518809-31518883)
chr7 (227-300)||(31733049-31733123)
chr7 (25-140)||(19502030-19502147)
chr7 (25-140)||(23554892-23555009)
chr7 (54-145)||(2058199-2058292)
chr7 (415-504)||(9235693-9235783)
chr7 (25-142)||(2761499-2761618)
chr7 (25-142)||(4586013-4586132)
chr7 (227-300)||(4508786-4508860)
chr7 (227-300)||(4510628-4510702)
chr7 (227-300)||(4512470-4512544)
chr7 (227-300)||(8153356-8153430)
chr7 (227-300)||(26417330-26417404)
chr7 (227-300)||(27347831-27347905)
chr7 (227-300)||(30024812-30024886)
chr7 (227-300)||(47674023-47674097)
chr7 (227-300)||(48491593-48491667)
chr7 (222-284)||(761263-761325)
chr7 (248-300)||(22328471-22328525)
chr7 (25-140)||(24514959-24515076)
chr7 (227-295)||(31105478-31105547)
chr7 (108-143)||(41649206-41649241)
chr7 (225-300)||(18126656-18126732)
chr7 (108-142)||(27347754-27347788)
chr7 (108-142)||(31733166-31733200)
chr7 (223-264)||(5514127-5514168)
chr7 (274-327)||(18413685-18413737)
chr7 (228-327)||(21639854-21639954)
chr7 (228-327)||(21646052-21646152)
chr7 (48-85)||(21983541-21983578)
chr7 (227-300)||(496063-496137)
chr7 (227-300)||(1113671-1113745)
chr7 (108-140)||(4178712-4178744)
chr7 (102-142)||(12098056-12098096)
chr7 (227-300)||(14069913-14069987)
chr7 (227-300)||(14379941-14380015)
chr7 (108-140)||(29990992-29991024)
chr7 (108-140)||(35853852-35853884)
chr7 (108-140)||(39731314-39731346)
chr7 (65-97)||(40808485-40808517)
chr7 (227-300)||(41317514-41317588)
chr7 (108-140)||(41317633-41317665)
chr7 (227-300)||(47676216-47676290)
chr7 (108-140)||(48408740-48408772)
[»] chr5 (66 HSPs)
chr5 (29-504)||(11181585-11182060)
chr5 (47-504)||(28832131-28832581)
chr5 (62-504)||(7160692-7161128)
chr5 (11-504)||(17003694-17004185)
chr5 (65-504)||(19588617-19589051)
chr5 (11-504)||(14520100-14520592)
chr5 (47-327)||(10281797-10282079)
chr5 (11-327)||(11916707-11917023)
chr5 (47-318)||(31300368-31300638)
chr5 (11-327)||(12083912-12084226)
chr5 (130-511)||(42127266-42127642)
chr5 (63-327)||(33030728-33030991)
chr5 (7-327)||(15464578-15464900)
chr5 (11-243)||(24553261-24553494)
chr5 (47-327)||(9353105-9353383)
chr5 (63-327)||(3880345-3880610)
chr5 (7-327)||(36932080-36932401)
chr5 (149-327)||(6741898-6742072)
chr5 (149-325)||(2630279-2630453)
chr5 (38-327)||(38219444-38219735)
chr5 (50-172)||(42127146-42127268)
chr5 (38-173)||(35387862-35387999)
chr5 (25-142)||(42426432-42426551)
chr5 (267-501)||(24553499-24553729)
chr5 (225-300)||(33831692-33831768)
chr5 (25-140)||(30683119-30683236)
chr5 (25-142)||(13488055-13488174)
chr5 (47-168)||(24136053-24136177)
chr5 (25-142)||(28750852-28750971)
chr5 (227-300)||(28278330-28278404)
chr5 (227-295)||(8566031-8566100)
chr5 (129-298)||(30899942-30900108)
chr5 (28-139)||(39468749-39468862)
chr5 (7-142)||(42926727-42926864)
chr5 (225-300)||(16452092-16452168)
chr5 (25-142)||(533621-533740)
chr5 (65-138)||(3075859-3075931)
chr5 (25-142)||(42428627-42428746)
chr5 (227-300)||(213479-213553)
chr5 (227-300)||(5887496-5887570)
chr5 (227-300)||(32636838-32636912)
chr5 (227-300)||(38747019-38747093)
chr5 (227-300)||(40147275-40147349)
chr5 (25-140)||(25412614-25412731)
chr5 (387-448)||(28537552-28537615)
chr5 (25-140)||(36074243-36074360)
chr5 (65-142)||(5887613-5887689)
chr5 (228-327)||(38192219-38192319)
chr5 (227-300)||(538039-538113)
chr5 (415-504)||(3880174-3880259)
chr5 (227-300)||(13488217-13488291)
chr5 (227-300)||(39468629-39468703)
chr5 (227-300)||(42428510-42428584)
chr5 (227-295)||(3075743-3075812)
chr5 (65-140)||(13239647-13239721)
chr5 (25-140)||(13342913-13343030)
chr5 (108-142)||(19806321-19806355)
chr5 (116-313)||(5611202-5611398)
chr5 (25-94)||(37439000-37439072)
chr5 (267-300)||(42926922-42926955)
chr5 (227-300)||(533783-533857)
chr5 (383-502)||(5611015-5611135)
chr5 (25-53)||(19806258-19806286)
chr5 (287-327)||(28537672-28537712)
chr5 (227-300)||(31182986-31183059)
chr5 (231-300)||(42310015-42310085)
[»] chr4 (100 HSPs)
chr4 (11-477)||(39774039-39774492)
chr4 (47-501)||(1983072-1983522)
chr4 (11-502)||(18377244-18377715)
chr4 (35-478)||(5112137-5112576)
chr4 (11-504)||(10047250-10047743)
chr4 (11-504)||(42599310-42599803)
chr4 (11-327)||(16623028-16623344)
chr4 (11-504)||(5268935-5269420)
chr4 (11-504)||(25861768-25862248)
chr4 (25-504)||(3777421-3777897)
chr4 (11-433)||(6743150-6743571)
chr4 (11-327)||(36314965-36315280)
chr4 (11-327)||(36329174-36329489)
chr4 (11-504)||(38152173-38152666)
chr4 (11-504)||(54867053-54867541)
chr4 (25-327)||(5396420-5396722)
chr4 (11-190)||(16628607-16628787)
chr4 (11-504)||(5143130-5143622)
chr4 (47-504)||(24333682-24334138)
chr4 (7-327)||(31985365-31985685)
chr4 (11-172)||(8689231-8689394)
chr4 (11-326)||(5147724-5148040)
chr4 (275-503)||(34495822-34496048)
chr4 (65-318)||(37781917-37782170)
chr4 (66-189)||(3793870-3793995)
chr4 (38-168)||(28468298-28468430)
chr4 (63-142)||(6542378-6542457)
chr4 (189-284)||(34670578-34670673)
chr4 (273-504)||(39245864-39246094)
chr4 (47-142)||(51336939-51337035)
chr4 (63-142)||(48893839-48893920)
chr4 (227-327)||(3796469-3796570)
chr4 (109-327)||(873352-873569)
chr4 (246-504)||(16630649-16630906)
chr4 (35-142)||(4587820-4587929)
chr4 (25-140)||(9927656-9927773)
chr4 (25-142)||(26175833-26175952)
chr4 (227-300)||(31474164-31474239)
chr4 (25-140)||(37740478-37740595)
chr4 (225-300)||(5871832-5871908)
chr4 (38-145)||(24742171-24742280)
chr4 (225-300)||(24969124-24969200)
chr4 (28-142)||(52082854-52082970)
chr4 (189-318)||(18912276-18912405)
chr4 (227-300)||(379394-379468)
chr4 (227-300)||(12073406-12073480)
chr4 (190-298)||(39593803-39593910)
chr4 (26-142)||(52095559-52095677)
chr4 (227-300)||(52467434-52467508)
chr4 (31-142)||(5429537-5429650)
chr4 (227-295)||(45687267-45687337)
chr4 (25-140)||(56178835-56178952)
chr4 (225-300)||(46147471-46147547)
chr4 (65-142)||(52467551-52467628)
chr4 (226-300)||(6655969-6656044)
chr4 (65-142)||(48142937-48143013)
chr4 (399-474)||(873637-873713)
chr4 (65-140)||(6677362-6677438)
chr4 (227-300)||(26364250-26364324)
chr4 (50-145)||(29760871-29760969)
chr4 (227-300)||(36994538-36994612)
chr4 (227-295)||(41639440-41639509)
chr4 (225-300)||(12119550-12119627)
chr4 (225-295)||(21688261-21688332)
chr4 (25-142)||(34570611-34570730)
chr4 (226-300)||(35662454-35662529)
chr4 (227-300)||(8665422-8665496)
chr4 (227-300)||(9927538-9927612)
chr4 (7-142)||(24968945-24969083)
chr4 (227-300)||(27417045-27417119)
chr4 (227-300)||(40632459-40632533)
chr4 (227-300)||(41639277-41639351)
chr4 (227-300)||(52095442-52095516)
chr4 (227-300)||(54199986-54200060)
chr4 (227-300)||(54883034-54883108)
chr4 (248-300)||(26699523-26699577)
chr4 (25-140)||(30000004-30000121)
chr4 (227-295)||(47038496-47038564)
chr4 (248-300)||(50262781-50262835)
chr4 (252-300)||(50673927-50673977)
chr4 (108-142)||(5871757-5871791)
chr4 (108-142)||(13009628-13009662)
chr4 (227-290)||(41964429-41964493)
chr4 (108-142)||(45687380-45687414)
chr4 (227-290)||(46703514-46703578)
chr4 (226-300)||(5349923-5349998)
chr4 (217-318)||(8114679-8114779)
chr4 (7-140)||(13992484-13992620)
chr4 (65-142)||(29254389-29254465)
chr4 (267-300)||(48893718-48893751)
chr4 (28-97)||(52093905-52093977)
chr4 (65-97)||(6375970-6376002)
chr4 (227-300)||(12744005-12744079)
chr4 (227-300)||(12745394-12745468)
chr4 (227-300)||(12745516-12745590)
chr4 (227-300)||(26175716-26175790)
chr4 (227-300)||(36463469-36463543)
chr4 (102-142)||(36463586-36463626)
chr4 (248-300)||(51337100-51337152)
chr4 (227-300)||(55085445-55085519)
[»] chr6 (57 HSPs)
chr6 (11-429)||(24435707-24436122)
chr6 (47-504)||(31979384-31979836)
chr6 (29-365)||(5571997-5572328)
chr6 (11-327)||(31086209-31086524)
chr6 (25-504)||(22963570-22964047)
chr6 (25-504)||(23824346-23824823)
chr6 (47-326)||(21801114-21801394)
chr6 (11-284)||(31936665-31936937)
chr6 (133-504)||(10077027-10077391)
chr6 (63-359)||(14521690-14521984)
chr6 (11-327)||(5757213-5757529)
chr6 (116-504)||(18232716-18233101)
chr6 (63-325)||(31076725-31076990)
chr6 (114-327)||(4630000-4630210)
chr6 (11-183)||(5017231-5017405)
chr6 (47-173)||(22709208-22709334)
chr6 (11-131)||(21272724-21272846)
chr6 (90-327)||(21356082-21356318)
chr6 (11-120)||(18234334-18234445)
chr6 (169-327)||(1114999-1115155)
chr6 (25-105)||(10076940-10077022)
chr6 (103-284)||(33721387-33721567)
chr6 (65-285)||(99244-99462)
chr6 (25-142)||(9183228-9183347)
chr6 (157-313)||(30518012-30518165)
chr6 (38-168)||(5674527-5674660)
chr6 (28-95)||(23896628-23896697)
chr6 (227-504)||(5017430-5017698)
chr6 (227-300)||(2973019-2973093)
chr6 (227-300)||(5043641-5043715)
chr6 (227-284)||(16569047-16569106)
chr6 (208-327)||(27165729-27165849)
chr6 (227-295)||(17763004-17763073)
chr6 (227-294)||(28137494-28137562)
chr6 (65-138)||(26954486-26954558)
chr6 (25-140)||(33160552-33160670)
chr6 (231-300)||(603168-603238)
chr6 (227-300)||(17758037-17758111)
chr6 (227-300)||(21588945-21589019)
chr6 (227-300)||(21593678-21593752)
chr6 (225-290)||(22424917-22424983)
chr6 (25-140)||(31404872-31404990)
chr6 (225-300)||(26830203-26830279)
chr6 (84-177)||(5385789-5385881)
chr6 (411-504)||(21801483-21801576)
chr6 (65-142)||(28137605-28137681)
chr6 (227-300)||(3038983-3039057)
chr6 (227-300)||(33211265-33211339)
chr6 (377-472)||(33721658-33721754)
chr6 (248-300)||(26954366-26954420)
chr6 (418-504)||(5572737-5572822)
chr6 (108-142)||(33211382-33211416)
chr6 (102-139)||(3039103-3039140)
chr6 (108-140)||(2171729-2171761)
chr6 (227-300)||(9183111-9183185)
chr6 (227-280)||(16567210-16567265)
chr6 (25-53)||(30834824-30834852)
[»] chr8 (93 HSPs)
chr8 (11-406)||(3051085-3051483)
chr8 (11-504)||(5702215-5702709)
chr8 (29-502)||(28307434-28307907)
chr8 (25-491)||(4696357-4696809)
chr8 (47-504)||(19752167-19752619)
chr8 (11-327)||(23799311-23799628)
chr8 (63-504)||(26403015-26403456)
chr8 (11-327)||(4456074-4456390)
chr8 (78-315)||(7492977-7493212)
chr8 (11-327)||(7412387-7412702)
chr8 (63-327)||(6127267-6127533)
chr8 (29-309)||(5990315-5990594)
chr8 (189-327)||(9054750-9054888)
chr8 (11-327)||(19175486-19175805)
chr8 (212-475)||(6813580-6813845)
chr8 (38-168)||(1261714-1261846)
chr8 (7-168)||(26288095-26288258)
chr8 (7-168)||(26301352-26301515)
chr8 (7-168)||(26313346-26313509)
chr8 (71-182)||(9054217-9054328)
chr8 (84-327)||(31071035-31071280)
chr8 (227-300)||(30291620-30291695)
chr8 (47-142)||(9765623-9765720)
chr8 (125-243)||(13204634-13204750)
chr8 (25-140)||(42498046-42498163)
chr8 (25-142)||(15212638-15212757)
chr8 (227-300)||(1292543-1292617)
chr8 (227-300)||(3303750-3303824)
chr8 (28-140)||(12702837-12702951)
chr8 (26-142)||(30143195-30143313)
chr8 (38-145)||(36979608-36979716)
chr8 (227-300)||(18141835-18141908)
chr8 (25-142)||(43036275-43036394)
chr8 (212-298)||(8863562-8863646)
chr8 (67-141)||(18141717-18141791)
chr8 (235-294)||(3772214-3772274)
chr8 (227-294)||(6598986-6599054)
chr8 (227-294)||(6674439-6674507)
chr8 (227-286)||(10929813-10929873)
chr8 (225-300)||(11383997-11384073)
chr8 (38-145)||(33037565-33037674)
chr8 (227-290)||(40328793-40328857)
chr8 (222-284)||(42093126-42093188)
chr8 (225-300)||(42435071-42435147)
chr8 (65-142)||(4731553-4731629)
chr8 (65-142)||(27811173-27811249)
chr8 (38-145)||(4759831-4759941)
chr8 (227-300)||(18655414-18655488)
chr8 (227-300)||(19491779-19491853)
chr8 (65-142)||(19491895-19491974)
chr8 (227-300)||(27811292-27811366)
chr8 (227-300)||(30143354-30143428)
chr8 (227-300)||(41364927-41365001)
chr8 (227-300)||(41366694-41366768)
chr8 (25-140)||(4733659-4733778)
chr8 (49-145)||(10688908-10689006)
chr8 (25-140)||(17982505-17982622)
chr8 (65-139)||(3303870-3303943)
chr8 (65-142)||(33352045-33352121)
chr8 (227-300)||(4162511-4162585)
chr8 (227-300)||(4283538-4283612)
chr8 (227-300)||(9765759-9765833)
chr8 (227-300)||(15212800-15212874)
chr8 (227-300)||(40221759-40221833)
chr8 (227-300)||(44353807-44353881)
chr8 (25-140)||(19945559-19945676)
chr8 (65-142)||(3318745-3318823)
chr8 (108-142)||(4743400-4743434)
chr8 (225-300)||(5689283-5689359)
chr8 (415-501)||(9765958-9766043)
chr8 (248-295)||(18106163-18106212)
chr8 (108-142)||(18106275-18106309)
chr8 (38-145)||(18852924-18853033)
chr8 (38-145)||(18870318-18870427)
chr8 (38-145)||(30655877-30655985)
chr8 (26-140)||(31218110-31218226)
chr8 (222-284)||(33503787-33503849)
chr8 (108-142)||(41366811-41366845)
chr8 (228-327)||(1261905-1262005)
chr8 (70-139)||(4162400-4162468)
chr8 (65-142)||(5689166-5689242)
chr8 (415-504)||(6127090-6127179)
chr8 (267-300)||(10015136-10015169)
chr8 (65-142)||(41365044-41365120)
chr8 (108-140)||(1746417-1746449)
chr8 (235-284)||(1822313-1822364)
chr8 (235-284)||(1856758-1856809)
chr8 (227-300)||(4731672-4731746)
chr8 (249-317)||(11771997-11772065)
chr8 (25-53)||(19948609-19948637)
chr8 (25-53)||(34254616-34254644)
chr8 (227-300)||(43036437-43036511)
chr8 (108-140)||(44303791-44303823)
[»] chr3 (106 HSPs)
chr3 (11-504)||(40592506-40592999)
chr3 (25-503)||(8370227-8370702)
chr3 (47-323)||(3323453-3323727)
chr3 (11-507)||(48438082-48438577)
chr3 (25-327)||(1736042-1736346)
chr3 (11-327)||(24694890-24695205)
chr3 (47-327)||(3328119-3328397)
chr3 (11-320)||(8126683-8126992)
chr3 (11-325)||(36029141-36029455)
chr3 (11-327)||(47923628-47923947)
chr3 (11-327)||(21711269-21711583)
chr3 (47-504)||(1417253-1417705)
chr3 (47-504)||(26298853-26299312)
chr3 (47-327)||(25795827-25796107)
chr3 (11-327)||(40844697-40845017)
chr3 (37-504)||(3715751-3716218)
chr3 (47-327)||(37466337-37466619)
chr3 (11-504)||(16264220-16264711)
chr3 (63-327)||(21353608-21353875)
chr3 (116-327)||(18552716-18552924)
chr3 (11-327)||(27974676-27974993)
chr3 (11-504)||(30709521-30710007)
chr3 (11-256)||(25929120-25929365)
chr3 (11-327)||(6794439-6794754)
chr3 (11-318)||(35925535-35925842)
chr3 (63-286)||(47649656-47649880)
chr3 (7-187)||(33386395-33386576)
chr3 (11-187)||(39032279-39032455)
chr3 (47-187)||(27986218-27986357)
chr3 (278-477)||(25929435-25929633)
chr3 (7-327)||(32143367-32143688)
chr3 (9-327)||(27453004-27453321)
chr3 (202-327)||(4386843-4386968)
chr3 (7-172)||(26928320-26928486)
chr3 (11-172)||(37725874-37726037)
chr3 (25-145)||(27026932-27027054)
chr3 (38-325)||(1305996-1306285)
chr3 (26-142)||(27038280-27038398)
chr3 (63-154)||(4386755-4386846)
chr3 (29-142)||(23392106-23392221)
chr3 (126-313)||(5366164-5366351)
chr3 (29-139)||(23410529-23410641)
chr3 (192-327)||(29100205-29100342)
chr3 (226-300)||(32744516-32744590)
chr3 (227-300)||(32891117-32891192)
chr3 (210-284)||(25517071-25517145)
chr3 (25-142)||(40734350-40734469)
chr3 (227-300)||(760861-760935)
chr3 (227-300)||(22835082-22835156)
chr3 (227-300)||(29682373-29682447)
chr3 (227-300)||(39153441-39153515)
chr3 (38-145)||(2671343-2671452)
chr3 (38-145)||(9091058-9091167)
chr3 (38-145)||(40372553-40372662)
chr3 (225-296)||(53921587-53921659)
chr3 (225-290)||(9666556-9666623)
chr3 (227-300)||(23391989-23392063)
chr3 (227-300)||(23410409-23410483)
chr3 (278-318)||(25929365-25929405)
chr3 (227-300)||(34491226-34491300)
chr3 (227-300)||(46860488-46860562)
chr3 (7-142)||(5236653-5236790)
chr3 (228-300)||(9581297-9581370)
chr3 (38-145)||(8477595-8477704)
chr3 (402-507)||(27038158-27038262)
chr3 (65-142)||(29810763-29810839)
chr3 (65-142)||(32890998-32891074)
chr3 (65-142)||(39153558-39153634)
chr3 (227-300)||(4569966-4570040)
chr3 (227-300)||(29196466-29196541)
chr3 (26-142)||(29812916-29813034)
chr3 (25-140)||(5260522-5260639)
chr3 (65-140)||(40735278-40735352)
chr3 (38-145)||(8738820-8738929)
chr3 (26-140)||(51398667-51398783)
chr3 (225-300)||(51398826-51398902)
chr3 (402-507)||(27026813-27026917)
chr3 (227-300)||(5236536-5236610)
chr3 (38-145)||(7167475-7167585)
chr3 (227-300)||(30236139-30236213)
chr3 (227-300)||(40734512-40734586)
chr3 (227-288)||(43403837-43403899)
chr3 (227-300)||(46173371-46173445)
chr3 (248-300)||(31340281-31340335)
chr3 (108-142)||(9581220-9581254)
chr3 (108-142)||(19684086-19684120)
chr3 (108-142)||(29682296-29682330)
chr3 (227-290)||(43401892-43401956)
chr3 (108-142)||(44331482-44331516)
chr3 (227-290)||(49199560-49199624)
chr3 (108-141)||(16498967-16499000)
chr3 (116-313)||(21156489-21156685)
chr3 (415-504)||(40844523-40844611)
chr3 (250-282)||(2075156-2075188)
chr3 (108-140)||(5258343-5258375)
chr3 (65-138)||(5373118-5373191)
chr3 (227-300)||(7762279-7762353)
chr3 (227-300)||(19683969-19684043)
chr3 (383-502)||(21156302-21156422)
chr3 (108-140)||(23198136-23198168)
chr3 (108-140)||(23200335-23200367)
chr3 (223-300)||(35138786-35138864)
chr3 (30-88)||(44331413-44331473)
chr3 (227-300)||(44331559-44331633)
chr3 (227-300)||(44700558-44700632)
chr3 (108-140)||(45095102-45095134)
[»] scaffold0006 (4 HSPs)
scaffold0006 (25-475)||(5583-6033)
scaffold0006 (11-491)||(2376-2855)
scaffold0006 (11-327)||(133014-133331)
scaffold0006 (108-141)||(149295-149328)
[»] scaffold0078 (2 HSPs)
scaffold0078 (47-504)||(23401-23857)
scaffold0078 (377-504)||(43128-43262)
[»] scaffold0036 (1 HSPs)
scaffold0036 (11-327)||(85729-86045)
[»] scaffold0148 (1 HSPs)
scaffold0148 (47-478)||(10625-11058)
[»] scaffold0087 (2 HSPs)
scaffold0087 (12-327)||(36568-36883)
scaffold0087 (11-327)||(43696-44012)
[»] scaffold0140 (1 HSPs)
scaffold0140 (7-327)||(8148-8470)
[»] scaffold0176 (2 HSPs)
scaffold0176 (26-327)||(17309-17599)
scaffold0176 (227-300)||(18083-18157)
[»] scaffold0098 (1 HSPs)
scaffold0098 (7-187)||(45383-45565)
[»] scaffold0188 (2 HSPs)
scaffold0188 (38-327)||(17712-18003)
scaffold0188 (38-327)||(23805-24096)
[»] scaffold0016 (2 HSPs)
scaffold0016 (160-298)||(102380-102516)
scaffold0016 (108-140)||(114540-114572)
[»] scaffold0184 (1 HSPs)
scaffold0184 (377-504)||(29582-29716)
[»] scaffold0002 (1 HSPs)
scaffold0002 (189-298)||(14757-14868)
[»] scaffold0466 (1 HSPs)
scaffold0466 (225-300)||(7339-7415)
[»] scaffold0477 (1 HSPs)
scaffold0477 (63-112)||(5745-5794)
[»] scaffold0066 (1 HSPs)
scaffold0066 (25-142)||(20612-20731)
[»] scaffold0219 (1 HSPs)
scaffold0219 (234-300)||(27523-27591)
[»] scaffold0076 (1 HSPs)
scaffold0076 (225-314)||(15937-16026)
[»] scaffold0286 (1 HSPs)
scaffold0286 (248-300)||(11591-11645)
[»] scaffold0014 (1 HSPs)
scaffold0014 (227-295)||(80368-80437)
[»] scaffold1519 (1 HSPs)
scaffold1519 (108-140)||(854-886)
[»] scaffold0491 (1 HSPs)
scaffold0491 (108-140)||(11360-11392)
[»] scaffold0060 (1 HSPs)
scaffold0060 (78-134)||(33372-33428)


Alignment Details
Target: chr1 (Bit Score: 376; Significance: 0; HSPs: 101)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 8 - 511
Target Start/End: Complemental strand, 22819795 - 22819289
Alignment:
Q  8 atttaagtgtttctgttcagattttgaaggagagcttgaagagagaaacttgg-tttacaaaggaggtaattttagggttgagtgtctttgtagtgaggt 106  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| || |||||||||||||||||||    
T  22819795 atttaagtgtttctgttcaaattttgaaggagagtttgaagagagaaacttgggtttacaaaggaggtaactttaggatttagtgtctttgtagtgaggt 22819696  T
Q  107 actcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcat 206  Q
     ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  22819695 tctcttgggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttccttttgtgttttttctcttaggattcat 22819596  T
Q  207 tgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctt 306  Q
    |||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  22819595 tgagagtgtgggtgacttgaaaaatggttagaaattatgtcttattctttgtgagctaaaaagctaatttcttgtaactcatttgtatcactttcatctt 22819496  T
Q  307 agtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggttaccatcttgtgtgtgtttgttttctttcttgctttcttat 406  Q
     ||||||||||||||| |||| |       |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22819495 ggtggattggagggctactctct-ccccccagagtaggtcatattggaccaaattgggttaccatcttgtgtgtgtttgttttctttcttgctttcttat 22819397  T
Q  407 cttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgt---ttgttgttgttgttgcttaaggacactttattcattgattacc 503  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||||||||||||| |||||||||||    
T  22819396 cttgttgatttgattatgcttgtggtgatgttttacatttagttttaagactgtttgttgttgttgttgttgcttaaggacactttatccattgattacc 22819297  T
Q  504 attttctt 511  Q
    ||||||||    
T  22819296 attttctt 22819289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 11 - 504
Target Start/End: Complemental strand, 29652175 - 29651681
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaa--gagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||| ||| |||||||||||||||||||||||  ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |    
T  29652175 taagtgtttttgtgcagattttgaaggagagcttgaaaagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatc 29652076  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---a 205  Q
    | || |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||| |||||||  |||||||||| |||||   |    
T  29652075 ttttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagtttccttttgtg--ttttctcttaggattcatta 29651978  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
    ||||||||||||||| |    ||||||||||||||||| ||||||||||| ||| ||||| |||| ||||||||||||| || |||||| ||||||||||    
T  29651977 ttgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagttaatttcttgtaattcttttgtaacactttcatc 29651880  T
Q  305 ttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttc 402  Q
     ||||||||||||| |||||||| |       ||| ||||||||||||||||||| |||||  |  |||||| ||||||||| || ||||||| | || |    
T  29651879 atagtggattggagtgctgctctct--cccccagattaggtcatattggaccgaactgggtcaaaaatcttg-gtgtgtttg-ttcctttctttcattgc 29651784  T
Q  403 ttatc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgatta 501  Q
    ||||| || ||| ||||||||||||||||||| || | ||||||||| | |||| |||||| |||||||||||| |||  ||||||||||||||||||||    
T  29651783 ttatctttattgctttgattatgcttgtggtgttgctctacacttagatctaagtctgttttttgttgttgttgattatagacactttattcattgatta 29651684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 11 - 504
Target Start/End: Original strand, 47098560 - 47099049
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||||| | ||||||||||| ||||||||  ||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||| |    
T  47098560 taagtgtttctttgcagattttgaatgagagcttttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagcgaggttc 47098659  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattg 208  Q
    |||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||  ||||| | |||||||    
T  47098660 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttt--tcttaggtttcattg 47098757  T
Q  209 agagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctta 307  Q
    ||||||||||||   || ||||||||||||||||| | ||||||| ||||| ||||| |||||||||||||||||||||| ||||| |||||||||||||    
T  47098758 agagtgtgggtgatgtg-aaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactca-ttgtaacactttcatctta 47098855  T
Q  308 gtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttc-ttgctttctta 405  Q
    |||||||||||||||||||| |       ||| | ||||||||||||||||| |||||  || |||||| ||||||||| || ||||| ||| || ||||    
T  47098856 gtggattggagggctgctctct--cccccagattcggtcatattggaccgaactgggtcaacaatcttg-gtgtgtttg-ttcctttctttgattgctta 47098951  T
Q  406 tc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    || || ||| ||||||||| ||||||||| || | ||||||||| |||| | |||||  ||||||||||| |||   ||||||||||  |||||||||||    
T  47098952 tctttattgctttgattatacttgtggtgttgctctacacttagatttaggtctgtt--ttgttgttgttacttggagacactttatctattgattacca 47099049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 11 - 504
Target Start/End: Original strand, 47102574 - 47103066
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||||| | ||||||||||| ||||||||  ||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |    
T  47102574 taagtgtttctttgcagattttgaatgagagcttttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttc 47102673  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattg 208  Q
    |||| |||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||  ||||||||||||  ||||| |||||||||    
T  47102674 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcatcattggaaggatcaaaaagctttcttttgtgttttt--tcttaggattcattg 47102771  T
Q  209 agagtgtgggtggcttgaaaaatggg--tagaaattatgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatct 305  Q
    |||||||| |||   |||||||||||  ||||||||| | ||||||| |||||  |||| |||| ||||||||||||||||| ||||| || ||||||||    
T  47102772 agagtgtgagtgatatgaaaaatgggtatagaaattaggacttgttcttttgtatgcttataagttaatttcttgtaactca-ttgtaacattttcatct 47102870  T
Q  306 tagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggttaccatcttgtgtgtgtttgttttctttc-ttgctttctt 404  Q
    |||||||||||| ||||||||| |       ||| ||||||||||||||||||| ||||| | ||  ||  ||||||||| || ||||| ||| || |||    
T  47102871 tagtggattggatggctgctctct--cccctagattaggtcatattggaccgaactgggtcaacaattttggtgtgtttg-ttcctttctttgattgctt 47102967  T
Q  405 atc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacc 503  Q
    ||| || ||| ||||||||| ||||||||| || | ||||||||| |||| | |||||  |||||||||||||||   ||||||||||  ||||||||||    
T  47102968 atctttattgctttgattatacttgtggtgttgctctacacttagatttaggtctgtt--ttgttgttgttgctttgagacactttatctattgattacc 47103065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 25 - 475
Target Start/End: Complemental strand, 13598748 - 13598298
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    |||||||||||||||||||||||||||||  || |||| ||||||||||||||| |||| |||||||||||||||||||||||  ||||| |||||| ||    
T  13598748 cagattttgaaggagagcttgaagagagagaaaattggattacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttggcaa 13598649  T
Q  123 acattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgat---tcattgagagtgtgggt 219  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||  |||||||||| |||   |||||||||||||||||    
T  13598648 acattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtg--ttttctcttaggattcatcattgagagtgtgggt 13598551  T
Q  220 ggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggag 318  Q
    | |    |||||| |||||||||| ||||||||||| ||| ||||| ||||||||||||||||| ||| |||||| |||||||||| |||||||||| ||    
T  13598550 gac--acaaaatgagtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtatctcttttgtaacactttcatcatagtggattgaag 13598453  T
Q  319 ggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgat 415  Q
    ||||||||| |       ||| ||||||||||||||||||| |||||  || |||||| ||||||||| || ||||||| | || |||||| || ||| |    
T  13598452 ggctgctctct--cccccagattaggtcatattggaccgaactgggtcaacaatcttg-gtgtgtttg-ttcctttctttcattgcttatctttattgct 13598357  T
Q  416 ttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttg 475  Q
    |||||||||||||||||| |  | ||||||||| | || | |||||| ||||||||||||    
T  13598356 ttgattatgcttgtggtgtttctctacacttagatctaggtctgttt-ttgttgttgttg 13598298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 47 - 502
Target Start/End: Complemental strand, 19073255 - 19072799
Alignment:
Q  47 agagagaaacttggtt-tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaacaccttgggta 143  Q
    ||||||||||||||   |||||||||||||| || |||||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||| ||    
T  19073255 agagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggata 19073156  T
Q  144 gttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattca-ttgagagtgtgggtggcttgaaaaatgggtagaaatt 242  Q
    || | |||||||||||||||||||||||||||||| |||||||  |||||||||| | |||| ||||||||||| ||| |    ||||||||||||||||    
T  19073155 gtgagatttcaccattggaaggatcaaaaagcttccttttgtg--ttttctcttagggttcatttgagagtgtgagtgac--acaaaatgggtagaaatt 19073060  T
Q  243 atgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagt 341  Q
    | || |||||| ||||| ||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||| |       ||| |    
T  19073059 aggtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctct--cccccagatt 19072962  T
Q  342 aggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgcttgtggtgatgtt 438  Q
    |||||||||||||||||| |||||  || |||||  ||||||||| || ||||||| | || |||||| || ||| ||||||||||||||||||| || |    
T  19072961 aggtcatattggaccgaactgggtcaacaatctttggtgtgtttg-ttcctttctttcattgcttatctttattgttttgattatgcttgtggtgttgct 19072863  T
Q  439 ttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattac 502  Q
     ||||||||| |||| | ||| || |||||||||||||||   ||||||||||  |||||||||    
T  19072862 ctacacttagatttaggtctgatttttgttgttgttgcttcgagacactttatctattgattac 19072799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 47 - 502
Target Start/End: Complemental strand, 19121145 - 19120689
Alignment:
Q  47 agagagaaacttggtt-tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaacaccttgggta 143  Q
    ||||||||||||||   |||||||||||||| || |||||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||| ||    
T  19121145 agagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggata 19121046  T
Q  144 gttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattca-ttgagagtgtgggtggcttgaaaaatgggtagaaatt 242  Q
    || | |||||||||||||||||||||||||||||| |||||||  |||||||||| | |||| ||||||||||| ||| |    ||||||||||||||||    
T  19121045 gtgagatttcaccattggaaggatcaaaaagcttccttttgtg--ttttctcttagggttcatttgagagtgtgagtgac--acaaaatgggtagaaatt 19120950  T
Q  243 atgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagt 341  Q
    | || |||||| ||||| ||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||| |       ||| |    
T  19120949 aggtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctct--cccccagatt 19120852  T
Q  342 aggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgcttgtggtgatgtt 438  Q
    |||||||||||||||||| |||||  || |||||  ||||||||| || ||||||| | || |||||| || ||| ||||||||||||||||||| || |    
T  19120851 aggtcatattggaccgaactgggtcaacaatctttggtgtgtttg-ttcctttctttcattgcttatctttattgttttgattatgcttgtggtgttgct 19120753  T
Q  439 ttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattac 502  Q
     ||||||||| |||| | ||| || |||||||||||||||   ||||||||||  |||||||||    
T  19120752 ctacacttagatttaggtctgatttttgttgttgttgcttcgagacactttatctattgattac 19120689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 47 - 327
Target Start/End: Complemental strand, 32889762 - 32889485
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagtt 146  Q
    |||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||  | || ||||||||||||||||||||||||||||||||     
T  32889762 agagagaaacttggattgcaaaggaggtaactttagggttgagtgtctttgtagtgaggtttttttgggttgggaaacattgtaaacaccttgggtagtg 32889663  T
Q  147 acatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgt 246  Q
    | ||||||||||||||||| || ||||||||| |||||||  |||||||||| |||||||||||||||||||||   |||||||||||||||||||| |     
T  32889662 agatttcaccattggaaggttc-aaaagcttc-ttttgtg--ttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaattagga 32889567  T
Q  247 cttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    ||||||||| ||| |||||  ||||||  |||||||||||||| ||||| |||||||||||||||||||||||| ||||||||    
T  32889566 cttgttcttgtgtaagcttgcaagctatttttcttgtaactca-ttgtaacactttcatcttagtggattggagagctgctct 32889485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 47 - 306
Target Start/End: Original strand, 40816586 - 40816844
Alignment:
Q  47 agagagaaacttggtt-tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaacaccttgggta 143  Q
    ||||||||||||||   |||||||||||||| || |||||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||||||    
T  40816586 agagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggta 40816685  T
Q  144 gttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaatta 243  Q
    || | |||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||||||||||||||||| |   | ||||| ||||||||||    
T  40816686 gtgagatttcaccattggaaggatcaaaaagcttccttttgtg--ttttctcttaggattcattgagagtgtgggtgac---acaaatgagtagaaatta 40816780  T
Q  244 tgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctt 306  Q
     ||||||||| ||||| ||||| ||||||||||||||||||||| |||||| ||||||||||||    
T  40816781 ggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatctt 40816844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 47 - 504
Target Start/End: Original strand, 47703705 - 47704163
Alignment:
Q  47 agagagaaacttg-gtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaacaccttgggta 143  Q
    ||||||||||||| |  |||||||||||||| ||||||||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||||||    
T  47703705 agagagaaacttgagaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggta 47703804  T
Q  144 gttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--attgagagtgtgggtggcttgaaaaatgggtagaaat 241  Q
    || | ||||||||||||||| ||| ||||| |||| |||||||  |||||||||| |||||  |||| ||| ||||||| |    |||||||||||||||    
T  47703805 gtgagatttcaccattggaatgataaaaaaacttccttttgtg--ttttctcttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaat 47703900  T
Q  242 tatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagag 340  Q
    || ||||||||||| ||| ||||| |||||||||||||||||| || |||||| |||||||||| ||||||||||||| |||||||| |       |||     
T  47703901 taggtcttgttcttgtgtaagcttgtaagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagagctgctctct--cccccagat 47703998  T
Q  341 taggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgcttgtggtgatgt 437  Q
    ||||||||||||||||||| |||||  || |||||| |||||||| ||| ||||||| | || |||||| || ||| ||||||||  ||||||||| ||     
T  47703999 taggtcatattggaccgaactgggtcaacaatcttg-gtgtgttt-tttcctttctttcattgcttatctttattgctttgattaaacttgtggtgttgc 47704096  T
Q  438 tttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    | ||||||||| |||| | || ||| ||||||||| |||||   ||||||||||  |||||||||||    
T  47704097 tctacacttagatttaggtctattttttgttgttgctgcttggagacactttatctattgattacca 47704163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 47 - 327
Target Start/End: Complemental strand, 9476586 - 9476307
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagtt 146  Q
    |||||||||||||| ||||||||||||||| ||| ||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||     
T  9476586 agagagaaacttggattacaaaggaggtaacttttgggttgaatgtctttgtagtgaggttctctttggttgggaaacattgtaaacatcttgggtagtg 9476487  T
Q  147 acatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgatt--cattgagagtgtgggtggcttgaaaaatgggtagaaattat 244  Q
    | ||||||||||| |||||||||||||||||| |||||||  |||||||||| ||||  ||||| ||| ||| ||| |    ||||||| |||||||||     
T  9476486 agatttcaccatttgaaggatcaaaaagcttccttttgtg--ttttctcttaagattcacattgtgagagtgagtgac--acaaaatggatagaaattag 9476391  T
Q  245 gtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    ||||||||||| ||| ||||| |||||||||||||| |||||| ||||||  ||||||||| ||||||||||||| ||||||||    
T  9476390 gtcttgttcttgtgtaagcttgtaagctaatttcttataactcttttgtaatactttcatcatagtggattggagagctgctct 9476307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 21536305 - 21536620
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaag--agagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||||||||||||||||||||||||  |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |    
T  21536305 taagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatc 21536404  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgat---tca 205  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||  |||||||| |||||||  | |||||||| | |   |||    
T  21536405 tcttaggttggaaaacattgtaaacaccttgggtagtaagatttcaccattggaaggatc-gaaagcttccttttgtg--tcttctcttagggttcatca 21536501  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
    ||||||| ||||||  |   | ||| |||||||||||| || |||||||| ||| |||||  |||||| ||||||||||||| |||||| |||||||||     
T  21536502 ttgagagagtgggtaac---acaaacgggtagaaattaagtattgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatt 21536597  T
Q  305 ttagtggattggagggctgctct 327  Q
     ||||||||||||| ||||||||    
T  21536598 atagtggattggagagctgctct 21536620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 25 - 327
Target Start/End: Complemental strand, 3282055 - 3281754
Alignment:
Q  25 cagattttgaaggagagcttgaag--agagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||| ||||||| |||| |||||||||||||||||||||||  ||||| |||||||||    
T  3282055 cagattttgaaggagagcttgaagtgagagaaacttggattacaaatgaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttgggaa 3281956  T
Q  123 acattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgat---tcattgagagtgtgggt 219  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| |||||||  | |||||||| | |   |||||||||| |||||     
T  3281955 acattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtg--tcttctcttagggttcatcattgagagagtggga 3281859  T
Q  220 ggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggag 318  Q
      |   | |||||||||||||||| ||||||||||| ||| |||||  |||||| ||||||||||||| |||||| |||||||||| | |||||||||||    
T  3281858 aac---acaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatcgtggattggag 3281763  T
Q  319 ggctgctct 327  Q
     ||||||||    
T  3281762 agctgctct 3281754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 108 - 504
Target Start/End: Original strand, 16124348 - 16124743
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcatt 207  Q
    ||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||  |||||| ||||||||    
T  16124348 ctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgtttt--ctcttaggattcatt 16124445  T
Q  208 ---gagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcat 303  Q
       || |||||||||  |    ||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||| |||||| |||||||||    
T  16124446 attgaaagtgtgggtaacac--aaaatgggtagaaattaggtcttgttcttatgtaagcttataagctaatttcttgtaactcttttgtaacactttcat 16124543  T
Q  304 cttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-ttt 401  Q
    | |||||||||||||||||||||| |       ||| ||||||||||||||||||| || ||  || |||||| |||||||||||   |||||| | |      
T  16124544 catagtggattggagggctgctctct--cccccagattaggtcatattggaccgaactgagtcaacaatcttg-gtgtgtttgttccttttctttcatag 16124640  T
Q  402 cttatc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgatt 500  Q
    |||||| || ||| |||||||||| |||||||| || | |||| |||| | || | |||||| |||||||||||||||    ||| ||||||||||||||    
T  16124641 cttatctttattgctttgattatgtttgtggtgttgctctacatttagatctaggtctgttt-ttgttgttgttgcttggacacattttattcattgatt 16124739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 25 - 504
Target Start/End: Original strand, 26644646 - 26645123
Alignment:
Q  25 cagattttgaa-ggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||| ||||||| |||||||  |||||||||| ||||||||||| |||||||||||||||||||||||||||||| |  || || ||||||||    
T  26644646 cagattttgaaaggagagcctgaagagagagaaacttggattacaaaggagataattttagggttgagtgtctttgtagtgaagatcttttgggttggga 26644745  T
Q  122 aacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgat---tcattgagagtgtggg 218  Q
    |||||||||||||||||| ||||| | |||||||||||||||||||| ||||||||| |||||||  | |||||||| | |   |||||||||| ||| |    
T  26644746 aacattgtaaacaccttgagtagtgagatttcaccattggaaggatc-aaaagcttccttttgtg--tcttctcttagggttcatcattgagagagtgag 26644842  T
Q  219 tggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattgga 317  Q
       |   | |||||||||||||||| ||||||||||| ||| |||||  |||||| ||||||||||||| |||||| |||||||||| || |||||||||    
T  26644843 aaac---acaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcataatggattgga 26644938  T
Q  318 gggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgt-gtgtgtttgttttctttcttgc-tttcttatcttgttga 414  Q
    | |||||||| |       ||| ||||||||||||||||||| |||||  || ||||| | ||||||||| || ||||||| | || ||||||||  ||     
T  26644939 gagctgctctct--cccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttg-ttcctttctttcattgcttatctttgtgc 26645035  T
Q  415 tttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    |||| |||||||||||||| || | |||||| || | || | ||| || ||||||||||||||||| |||||||||  ||||||||||||    
T  26645036 tttgtttatgcttgtggtgttgctctacactaag-tctaggtctgctt-ttgttgttgttgcttaaagacactttacacattgattacca 26645123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 13604357 - 13604674
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| || |||||| |||||||||| |||||  |||||||||| |||||||||||| || ||||||||||||| ||||||||||||||  |    
T  13604357 taagtgttcttgtgcaaattttggaggagagcttaaagagagagaaacttggattacaaaggagggaactttagggttgagtatctttgtagtgaggatc 13604456  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---a 205  Q
    |||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| |||||||| || ||| ||| | |||   |    
T  13604457 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctct-ttagggttcatta 13604554  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcactttcat 303  Q
    ||||||| |||||   |   | |||||||||||||||| ||||||||||| ||| || ||  ||||||  ||||||||||||| |||||| || ||||||    
T  13604555 ttgagagagtgggaaac---acaaatgggtagaaattaggtcttgttcttgtgtaagtttgcaagctatttttcttgtaactc-tttgtaacattttcat 13604650  T
Q  304 cttagtggattggagggctgctct 327  Q
    | ||||||||||||| ||||||||    
T  13604651 catagtggattggagagctgctct 13604674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 8 - 229
Target Start/End: Original strand, 9022638 - 9022857
Alignment:
Q  8 atttaagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttgg-tttacaaaggaggtaattttagggttgagtgtctttgtagtgag 104  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||  ||| || |||| |||||||||||||||    
T  9022638 atttaagtgtttcagttcagattttgaaggagagcttgaagagagagaaacttgggtttacaaaggaggtatcttttgg-ttgaatgtctttgtagtgag 9022736  T
Q  105 gtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc 204  Q
    || ||||| ||||| |||||||||||||||||||  ||||| | ||||||||||||||||||| |||||||||| |    ||  |||||||||| |||||    
T  9022737 gttctcttgggttgagaaacattgtaaacacctttcgtagtgagatttcaccattggaaggataaaaaagcttcct----tgagttttctcttaggattc 9022832  T
Q  205 attgagagtgtgggtggcttgaaaa 229  Q
    |||| |||||||| || ||||||||    
T  9022833 attgtgagtgtggttgacttgaaaa 9022857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 11 - 327
Target Start/End: Complemental strand, 37070129 - 37069816
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| |||||||||||| |||||| |||||||||  ||||||| ||||||||||||||| |||| |||||||||||||||||||||||  |    
T  37070129 taagtgttcttgtgcagattttgaagtagagctggaagagagagaaacttggattacaaaggaggtaactttatggttgagtgtctttgtagtgaggatc 37070030  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---a 205  Q
    |||| ||||||||||||||||||||||||||| || | | |||||||||||||||||||| ||||||||| |||||||| || ||| ||||| |||   |    
T  37070029 tcttgggttgggaaacattgtaaacaccttggataatgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctct-ttatggttcatta 37069932  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
    ||||| | ||||||  |   | |||||||||||||||| ||||||||||| ||| |||||  || |||   | ||||||||| |||||| ||||||||||    
T  37069931 ttgagtgagtgggtaac---acaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaaacta---ttttgtaactc-tttgtaacactttcatc 37069839  T
Q  305 ttagtggattggagggctgctct 327  Q
     |||||||| |||| | ||||||    
T  37069838 atagtggatcggagagatgctct 37069816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 47 - 190
Target Start/End: Original strand, 27104175 - 27104317
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagtt 146  Q
    |||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||||||| ||| |||||||||||||     
T  27104175 agagagaaacttggattacaaaggaggtaactttaaggttgagtgtctttgtagtgaggt-ctcttgggttgggaaacattataagcaccttgggtagtg 27104273  T
Q  147 acatttcaccattggaaggatcaaaaagcttcattttgtgtttt 190  Q
    | |||||||||||||||| ||||||||||||| |||||||||||    
T  27104274 agatttcaccattggaagaatcaaaaagcttccttttgtgtttt 27104317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 221 - 468
Target Start/End: Original strand, 9023784 - 9024023
Alignment:
Q  221 gcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggg 320  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||| | ||||||||||||||||||||||||||||||||| |    
T  9023784 gcttgaaaagtgggtagaaattaggtcttattctttgtgagcttttatgctaatttattgtatcccatttgtatcactttcatcttagtggattggagag 9023883  T
Q  321 ctgctctttnnnnnnnagagtaggtcatattggaccgaattgggttaccatcttgtgtgtgtttgttttctttcttgctttcttatc-ttgttgatttga 419  Q
    || || | |       | | |||||||||||||| |||| | ||||||||       |||||||||||||||||||||||||||||| || |||  ||||    
T  9023884 ctactatat--tccccataataggtcatattggagcgaactaggttacca-------tgtgtttgttttctttcttgctttcttatctttattgcattga 9023974  T
Q  420 ttatgcttgtggtgatgttttacacttagttttaagactgtttgttgtt 468  Q
    |||||||||||||| || | ||||||||| |||| |  |||||||||||    
T  9023975 ttatgcttgtggtgttgctatacacttagatttaggtatgtttgttgtt 9024023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 189 - 367
Target Start/End: Original strand, 17345432 - 17345607
Alignment:
Q  189 ttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcat 288  Q
    |||||||||| |||||||| |||||||||||| ||| |||||||||||||||||| || |||||||||||| ||| ||| |||||||||||||| | |||    
T  17345432 ttttctcttaagattcattaagagtgtgggtgacttaaaaaatgggtagaaattaggttttgttctttgtgggctcttatgctaatttcttgtagcacat 17345531  T
Q  289 ttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggtta 367  Q
    ||||| ||| |||||||||||||||||||| ||| ||||||       ||||||||||||||| ||||||| |||||||    
T  17345532 ttgtaccacgttcatcttagtggattggagagctcctcttt---ccccagagtaggtcatattagaccgaactgggtta 17345607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 38 - 327
Target Start/End: Original strand, 19358604 - 19358894
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg-aaacattgtaaacacc 136  Q
    |||||||  |||||||||||||| |||||||||||| || | ||||||||||||||||||||||||||  || || ||||||| ||||||||||||||||    
T  19358604 agagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatcttttgggttgggaaaacattgtaaacacc 19358703  T
Q  137 ttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--attgagagtgtgggtggcttgaaaaatggg 234  Q
    ||||||||| | ||||||||||||||||||||  |||||||| | |||||| || ||| ||| | |||  |||||||| ||||  ||    | |||||||    
T  19358704 ttgggtagtgagatttcaccattggaaggatc-taaagcttcctcttgtgtcttctcttttagggttcatattgagagagtgg--ggaaacacaaatggg 19358800  T
Q  235 tagaaattatgtcttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    |||||  || ||||||||||| ||| |||||  ||||||  ||||||||||| | |||||| |||||||||| ||||||||||||| ||||||||    
T  19358801 tagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaac-cctttgtaacactttcatcatagtggattggagagctgctct 19358894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 38 - 327
Target Start/End: Original strand, 19361193 - 19361483
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg-aaacattgtaaacacc 136  Q
    |||||||  |||||||||||| | |||||||||||| || | ||||||||||||||||||||||||||  ||||| ||||||| ||||||||||||||||    
T  19361193 agagcttagagagagaaacttagattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaacattgtaaacacc 19361292  T
Q  137 ttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--attgagagtgtgggtggcttgaaaaatggg 234  Q
    ||||||||| | ||||||||||||||||||||  |||||||| | |||||| || ||| ||| | |||  |||||||| ||||  ||    | |||||||    
T  19361293 ttgggtagtgagatttcaccattggaaggatc-taaagcttcctcttgtgtcttctcttttagggttcatattgagagagtgg--ggaaacacaaatggg 19361389  T
Q  235 tagaaattatgtcttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    |||||  || ||||||||||| ||| |||||  || |||  ||||||||||| | |||||| |||||||||| ||||||||||||| ||||||||    
T  19361390 tagaatctaggtcttgttcttgtgtaagcttgcaaactatttttcttgtaac-cctttgtaacactttcatcatagtggattggagagctgctct 19361483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 38 - 168
Target Start/End: Original strand, 19366068 - 19366200
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| |||||||||||| || | ||||||||||||||||||||||||||  ||||| |||||||  ||| |||||||||||    
T  19366068 agagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaatattgtaaacac 19366167  T
Q  136 cttgggtagttacatttcaccattggaaggatc 168  Q
    |||||||||| | ||||||||||||||||||||    
T  19366168 cttgggtagtgagatttcaccattggaaggatc 19366200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 38 - 327
Target Start/End: Original strand, 24202529 - 24202820
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| |||||||||||| || ||||||||||||||||||||||| |||   ||||| |||||||  ||||||||||| |||    
T  24202529 agagcttagagagagaaacttggattacaaaggagggaactttagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcac 24202628  T
Q  136 cttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--attgagagtgtgggtggcttgaaaaatgg 233  Q
    |||||||||| | || |||||||||||||||||  |||||||| | | |||| || ||| ||| | |||  |||| ||| ||||  ||    | ||||||    
T  24202629 cttgggtagtgagatctcaccattggaaggatc-taaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgg--ggaaacacaaatgg 24202725  T
Q  234 gtagaaattatgtcttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    ||||||  || ||||||||||| ||| |||||  ||||||  ||||||||||| | |||||| |||||||||| ||||||||||||| ||||||||    
T  24202726 gtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaac-cctttgtaacactttcatcatagtggattggagagctgctct 24202820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 35109423 - 35109556
Alignment:
Q  160 ggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtg 259  Q
    |||||||| |||||||||| ||| || ||||  ||| || ||||||||| ||||||| ||| |||||||| ||||||||||||| |  ||||||||||||    
T  35109423 ggaaggataaaaaagcttcctttagtatttt--ctcgtaggattcattgtgagtgtgtgtgacttgaaaattgggtagaaattaaggtttgttctttgtg 35109520  T
Q  260 agcttttaagctaatttcttgtaactcatttgtatc 295  Q
    |||||||||||||||||||||||||  |||||||||    
T  35109521 agcttttaagctaatttcttgtaacctatttgtatc 35109556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 309
Target Start/End: Original strand, 32736909 - 32737029
Alignment:
Q  189 ttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcat 288  Q
    |||||||||| ||||||||| |||||| | || |||||||||||||||||||||| |  ||||||||| ||| ||||||||||||||| |||||||   |    
T  32736909 ttttctcttaggattcattgtgagtgtcgatgacttgaaaaatgggtagaaattagggtttgttctttatgaacttttaagctaattttttgtaacctct 32737008  T
Q  289 ttgtatcactttcatcttagt 309  Q
    ||||||||| |||||| ||||    
T  32737009 ttgtatcaccttcatcatagt 32737029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 10925075 - 10925194
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    |||||||||||||||||||||||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | |   || ||||| ||||||||    
T  10925075 cagattttgaaggagagcttgaagagagagaaacttggaaaatcaaaggaggtaactttagggttgagggtctttg-attatagttctcttgggttggga 10925173  T
Q  122 aacattgtaaacaccttgggt 142  Q
    |||||||||||||||||||||    
T  10925174 aacattgtaaacaccttgggt 10925194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 298
Target Start/End: Complemental strand, 10997159 - 10997031
Alignment:
Q  169 aaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaa 268  Q
    |||||||||| ||| |||||||| || ||| ||||||  | ||||| ||||| |||||||||||||||||||||| |  ||||| ||||| | |||||||    
T  10997159 aaaaagcttcctttagtgttttt-cttttaggattcaacgtgagtgagggtgacttgaaaaatgggtagaaattagggtttgttatttgttatcttttaa 10997061  T
Q  269 gctaatttcttgtaactcatttgtatcact 298  Q
    | ||||||||||||||  ||||||||||||    
T  10997060 gttaatttcttgtaacatatttgtatcact 10997031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 313
Target Start/End: Original strand, 11032268 - 11032357
Alignment:
Q  224 tgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggat 313  Q
    ||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||   ||| ||||||| | ||| ||||||||    
T  11032268 tgaaaaatgggtagaaattatgttttgttctttgtgagtttttaatctaatttcttgtaacctctttatatcactattatcatagtggat 11032357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 8550941 - 8550867
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| || |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  8550941 aaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaactcatttgtatcccttt 8550867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 11031302 - 11031433
Alignment:
Q  102 gaggtactcttaggttgggaaacatt-gtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatg 200  Q
    ||||| ||||| |||||||||||||| ||||||||| |||||||| |   ||||  |||||||||||||||||||||| ||| ||| ||||||||||| |    
T  11031302 gaggttctcttgggttgggaaacatttgtaaacaccgtgggtagtgag--ttcattattggaaggatcaaaaagcttcctttagtg-tttttctcttagg 11031398  T
Q  201 attcattgagagtgtgggtggcttgaaaaatgggt 235  Q
    || ||||| |||||||  || ||||||||||||||    
T  11031399 atacattgtgagtgtgaatgacttgaaaaatgggt 11031433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 44454994 - 44455131
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttg--aagagagaaacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtga 103  Q
    ||||||||||||  ||| ||||||||||||||||| |||   |||||||||||||||  | |||||||||||| |||||||||||| ||||||| | |      
T  44454994 tatttaagtgttcttgtgcagattttgaaggagaggttgtagagagagaaacttggtaaatcaaaggaggtaactttagggttgagggtctttg-attag 44455092  T
Q  104 ggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
     ||  |||| |||||||||||||||||||||||||||||    
T  44455093 agttttcttgggttgggaaacattgtaaacaccttgggt 44455131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 318
Target Start/End: Original strand, 918392 - 918522
Alignment:
Q  189 ttttctcttatgattcattgagagtgtgggtggc-ttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactca 287  Q
    |||||||||| ||||||||| | || || ||||  |||||||||||||||||||||||  |||||||||||||| || |||| |||||||||||||        
T  918392 ttttctcttaggattcattgtgggtttgagtggaattgaaaaatgggtagaaattatggtttgttctttgtgagtttgtaagataatttcttgtaatatc 918491  T
Q  288 tttgtatcactttcatcttagtggattggag 318  Q
    ||||||||||| | ||| |||||| ||||||    
T  918492 tttgtatcactcttatcatagtggtttggag 918522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 3189184 - 3189300
Alignment:
Q  26 agattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    ||||||||||||||||| ||||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | | | || ||||| |||||||||    
T  3189184 agattttgaaggagagcatgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg-attaaagttctcttgggttgggaa 3189282  T
Q  123 acattgtaaacaccttgg 140  Q
    ||||||||||||||||||    
T  3189283 acattgtaaacaccttgg 3189300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 3198001 - 3198117
Alignment:
Q  26 agattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    ||||||||||||||||| ||||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | | | || ||||| |||||||||    
T  3198001 agattttgaaggagagcatgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg-attaaagttctcttgggttgggaa 3198099  T
Q  123 acattgtaaacaccttgg 140  Q
    ||||||||||||||||||    
T  3198100 acattgtaaacaccttgg 3198117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 3206840 - 3206956
Alignment:
Q  26 agattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    ||||||||||||||||| ||||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | | | || ||||| |||||||||    
T  3206840 agattttgaaggagagcatgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg-attaaagttctcttgggttgggaa 3206938  T
Q  123 acattgtaaacaccttgg 140  Q
    ||||||||||||||||||    
T  3206939 acattgtaaacaccttgg 3206956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 230 - 327
Target Start/End: Original strand, 27104333 - 27104423
Alignment:
Q  230 atgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    |||||||||||||| ||||||||||| |||      ||||||||||||||||||||| |||||| |||||||||| ||||||||||||| ||||||||    
T  27104333 atgggtagaaattaggtcttgttctt-gtg------taagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctct 27104423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 288 - 504
Target Start/End: Complemental strand, 775757 - 775543
Alignment:
Q  288 tttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggttacca-tcttgtgtgtgtttgt 386  Q
    |||||| |||||||||||||||||||||||| ||| |||| |       ||| ||||||||||||||||||||||||| | || |||||  |||||||||    
T  775757 tttgtaacactttcatcttagtggattggagagctactctctccccc--agattaggtcatattggaccgaattgggtcaacaatcttga-tgtgtttgt 775661  T
Q  387 tttctttcttgcttt-cttatcttg-ttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggac 484  Q
    |  ||||||| | || ||||||||  ||| ||||||||||||||||||| || | ||||||||| |||| | |||||| |||||||||||||||   |||    
T  775660 tc-ctttctttcattgcttatctttattgctttgattatgcttgtggtgttgctctacacttagatttaggtctgttt-ttgttgttgttgcttggagac 775563  T
Q  485 actttattcattgattacca 504  Q
    |||||||  |||| ||||||    
T  775562 actttatctattggttacca 775543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 121 - 327
Target Start/End: Original strand, 19379917 - 19380123
Alignment:
Q  121 aaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--attgagagtgtggg 218  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||  |||||||| | |||||| || ||| ||| | |||  |||||||| ||||     
T  19379917 aaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-taaagcttcctcttgtgtcttctcttttagggttcatattgagagagtgg- 19380014  T
Q  219 tggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattgg 316  Q
     ||    | ||||||||||||  || ||||||||||| ||| |||||  || |||  ||||||||||| | |||||| |||||||||| |||||||||||    
T  19380015 -ggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaaactatttttcttgtaac-cctttgtaacactttcatcatagtggattgg 19380112  T
Q  317 agggctgctct 327  Q
    || ||||||||    
T  19380113 agagctgctct 19380123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 40122354 - 40122278
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||| |||||||  | |||||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  40122354 gaaaaatgggtcgaaattagat-ttgttctttgtgagcttgtttaagctaatttcttataactcatttgtatcacttt 40122278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 50169366 - 50169290
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| |  ||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  50169366 gaaaaatgggtagaaattaggg-ttgttctttgtgagcttgtcaaagctaatttcttgtaactcatttgtatctcttt 50169290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 834440 - 834364
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||| |||||||||||| ||||||| | | | || ||||| |||||||||||||||||||||||||||||    
T  834440 caaaggaggtaactttagggttgagggtctttg-attaaagttctcttgggttgggaaacattgtaaacaccttgggt 834364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 300
Target Start/End: Original strand, 10925236 - 10925311
Alignment:
Q  226 aaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||||| |||||||||||  ||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  10925236 aaaaatggatagaaattatgg-ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 10925311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 4552909 - 4552834
Alignment:
Q  66 aaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||||||||| |||||||||||| ||||||  | |||||| ||||| ||||| |||||||||||||||||||||||    
T  4552909 aaaggaggtaactttagggttgagggtcttta-attgaggttctcttgggttgagaaacattgtaaacaccttgggt 4552834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 17345350 - 17345414
Alignment:
Q  63 tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacatt 127  Q
    |||||||||||||  ||||||||||||||||||||||||||||| |||||  |||| ||||||||    
T  17345350 tacaaaggaggtacatttagggttgagtgtctttgtagtgaggttctcttgagttgagaaacatt 17345414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 45644509 - 45644434
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||| ||||||||| || ||||||||||||||||| |  |||||||||||||| |||||||||||||| ||||    
T  45644509 aaaatggatagaaattaagttttgttctttgtgagcttgtcaaagctaatttcttgcaactcatttgtatctcttt 45644434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 31659250 - 31659326
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| | || ||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  31659250 gaaaaatgggtagaaattagggct-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 31659326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 47255496 - 47255420
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  47255496 gaaaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 47255420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 252 - 318
Target Start/End: Original strand, 48382457 - 48382523
Alignment:
Q  252 tctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggag 318  Q
    ||||||||| ||| |||| ||||||||||||||  |||||||||||||||||| || ||||||||||    
T  48382457 tctttgtgaacttgtaagttaatttcttgtaacctatttgtatcactttcatcatattggattggag 48382523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 197181 - 197105
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||| |||||||||||| |||||||    ||| | ||||| |||||||||||||||||||||||||||||    
T  197181 caaaggaggtaactttagggttgagggtctttgattagagtt-ctcttgggttgggaaacattgtaaacaccttgggt 197105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 13138247 - 13138171
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||| |||||||||||| ||||||| | |  ||| ||||| || ||||||||||||||||||||||||||    
T  13138247 caaaggaggtaactttagggttgagggtctttg-attagggttctcttggggtgggaaacattgtaaacaccttgggt 13138171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 28220542 - 28220423
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||| |||||||||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | |   || ||||| ||||||||    
T  28220542 cagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg-attagagttctcttgggttggga 28220444  T
Q  122 aacattgtaaacaccttgggt 142  Q
    | ||||| |||||||||||||    
T  28220443 agcattgaaaacaccttgggt 28220423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 28223737 - 28223618
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||| |||||||||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | |   || ||||| ||||||||    
T  28223737 cagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg-attagagttctcttgggttggga 28223639  T
Q  122 aacattgtaaacaccttgggt 142  Q
    ||||||| | |||||||||||    
T  28223638 aacattgaagacaccttgggt 28223618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 31659090 - 31659209
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||  |||||||||||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | |   || ||||| |||| |||    
T  31659090 cagattttgagagagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg-attagagttctcttgggttcgga 31659188  T
Q  122 aacattgtaaacaccttgggt 142  Q
    |||||||||||||||||||||    
T  31659189 aacattgtaaacaccttgggt 31659209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 415 - 504
Target Start/End: Original strand, 40816870 - 40816959
Alignment:
Q  415 tttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    |||||||||||| |||||| || | ||||||||| |||| | |||||| |||||||||||||||   ||||||||||  |||||||||||    
T  40816870 tttgattatgctcgtggtgttgctctacacttagatttaggtctgttttttgttgttgttgcttggagacactttatctattgattacca 40816959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 197062 - 196988
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||| ||||||||||| |  |||||||||||||||||  ||||| ||||||||||||||||||||||||| ||||    
T  197062 aaaattggtagaaattaggg-ttgttctttgtgagcttgtttaagttaatttcttgtaactcatttgtatcccttt 196988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 834321 - 834247
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||| ||||||||| |  |||||||||||||||||  |||||||||||||||||||| |||||||||| ||||    
T  834321 aaaatggatagaaattaggg-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 834247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 313
Target Start/End: Complemental strand, 8281563 - 8281378
Alignment:
Q  126 ttgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttg 225  Q
    |||||||||||||||||||| | || |||  |  ||||| || ||||| |||| ||| |||  |||||||||  ||||||||| ||||| ||||| |||     
T  8281563 ttgtaaacaccttgggtagtgagatctcattagaggaagaataaaaaaacttcctttagtg--ttttctctttggattcattgtgagtgcgggtgactta 8281466  T
Q  226 aaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggat 313  Q
    || ||| | |||||||||    |||||||||||||||  ||| | ||||||||||||||  |||||||||| | | ||| ||||||||    
T  8281465 aataattgatagaaattagaatttgttctttgtgagcgattatgttaatttcttgtaacatatttgtatcattcttatcatagtggat 8281378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 41360807 - 41360886
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactctt--aggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||| ||||||||||||||  | ||||||||||| |||||   ||||||||||||| ||||||| |||||||    
T  41360807 caaaggaggtaactttagggttgagtgcatgtgtagtgaggttctcttgagggttgggaaacatcgtaaacatcttgggt 41360886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 41360928 - 41361002
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| || ||||||||||||||||| |  || ||||||||||||||| |||||||||| ||||    
T  41360928 aaaatgggtagaaattaggt-ttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctcttt 41361002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 136
Target Start/End: Original strand, 3156718 - 3156831
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||||||||| |||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | |   || ||||| |||| |||    
T  3156718 cagattttgaaggagagctggaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg-attagagttctcttgggtttgga 3156816  T
Q  122 aacattgtaaacacc 136  Q
    |||||||||||||||    
T  3156817 aacattgtaaacacc 3156831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 23555599 - 23555462
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaagagagaaa--cttggttta-caaaggaggtaattttagggttgagtgtctttgtagtga 103  Q
    |||||||||||||  |||||  ||||||  |||||||| ||||||||||  |||||   | |||||||||||| || |||||||||  |||||| | | |    
T  23555599 tatttaagtgttttagttcattttttgagagagagcttcaagagagaaaaacttgggaaatcaaaggaggtaacttcagggttgaggatctttg-attaa 23555501  T
Q  104 ggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
     || ||||| |||||||||||||||||||||||||||||    
T  23555500 agttctcttgggttgggaaacattgtaaacaccttgggt 23555462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 226 - 290
Target Start/End: Original strand, 34603589 - 34603654
Alignment:
Q  226 aaaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcattt 290  Q
    |||||||||||||||||| |  |||||||||||||||||  |||||||||||||||||||| |||||    
T  34603589 aaaaatgggtagaaattaggg-ttgttctttgtgagcttgtttaagctaatttcttgtaacccattt 34603654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 15820319 - 15820395
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||| ||||||| |||||| || ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  15820319 gaaagatgggtaaaaattaggt-ttgttctttgtgagcttgttgaagctaatttcttgtaacacatttgtatctcttt 15820395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 19754507 - 19754583
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| |  ||||||||||||||||| |  ||||||||||||||||||  ||||||||| ||||    
T  19754507 gaaaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaaccgatttgtatctcttt 19754583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 28265785 - 28265751
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||||||||||||||||||||||||||    
T  28265785 ctcttaggttgggaaacattgtaaacaccttgggt 28265751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 37168311 - 37168375
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcattt 290  Q
    ||||||||||||||||| |  |||||||||||||||||  |||||||||||||||||||| |||||    
T  37168311 aaaatgggtagaaattaggg-ttgttctttgtgagcttgtttaagctaatttcttgtaacccattt 37168375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 3847394 - 3847318
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||| |||||||| ||| |||||||    ||| | ||||| |||||||||||||||||||||||||||||    
T  3847394 caaaggaggtaactttagggtcgagggtctttgattagagtt-ctcttgggttgggaaacattgtaaacaccttgggt 3847318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 7482384 - 7482321
Alignment:
Q  228 aaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcattt 290  Q
    |||||||||||||||| |  |||||||||||||||||  |||||||||||||||||||| |||||    
T  7482384 aaatgggtagaaattaggg-ttgttctttgtgagcttgtttaagctaatttcttgtaacccattt 7482321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 11348712 - 11348787
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcactttc 301  Q
    ||||| ||||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||||||| |||||    
T  11348712 aaaattggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttc 11348787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 223 - 300
Target Start/End: Complemental strand, 13138133 - 13138056
Alignment:
Q  223 ttgaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||| ||||||||| |||  ||||||||||||||| |  |||||||||||||||||| |||||| ||| ||||    
T  13138133 ttgaaaaatggatagaaattaggtc--gttctttgtgagcttgttgaagctaatttcttgtaacccatttgcatctcttt 13138056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 30476764 - 30476645
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    |||||||||||||||||||||||||||||  |||||||   | |||| || ||||| |||||| |||| || ||||    ||| | ||||| ||||||||    
T  30476764 cagattttgaaggagagcttgaagagagagaaacttgggaaatcaaatgatgtaatgttagggctgagggtatttgattagagtt-ctcttgggttggga 30476666  T
Q  122 aacattgtaaacaccttgggt 142  Q
    |||||||||||||||||||||    
T  30476665 aacattgtaaacaccttgggt 30476645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 45644628 - 45644552
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||| ||| |||||||||||| ||||||| | |  ||| |||||||||||| |||||||||||||| |||||||    
T  45644628 caaaggagataactttagggttgagggtctttg-attagggttctcttaggttggaaaacattgtaaacatcttgggt 45644552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 193625 - 193699
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||| | ||||| |  ||||||||||||||||||||||||||||| ||||    
T  193625 aaaatgggtagaaattaggg-ttgttctttattagcttgttgaagctaatttcttgtaactcatttgtatctcttt 193699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 3156879 - 3156953
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  3156879 aaaatgggtagaaattaggg-ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt 3156953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 4552791 - 4552717
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| || |||| |||||||||||| |  |||||||||||||||||| | |||||||| ||||    
T  4552791 aaaatgggtagaaattaggt-ttgtcctttgtgagcttgttgaagctaatttcttgtaacccctttgtatcccttt 4552717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 13547243 - 13547169
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  |||||| ||||||||||| |||||||||| ||||    
T  13547243 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctattttcttgtaacccatttgtatctcttt 13547169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 28220380 - 28220306
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  28220380 aaaatgggtagaaattaggg-ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt 28220306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 42298129 - 42298055
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||| ||||||||||| |  ||||| ||||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  42298129 aaaattggtagaaattaggg-ttgttttttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 42298055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 46064932 - 46065006
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagct--tttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||| || |||||| || ||||||||||||||||  || |||||||||||||||||||||| |||||| ||||    
T  46064932 aaaatggataaaaattaggt-ttgttctttgtgagctcgttgaagctaatttcttgtaactcatgtgtatctcttt 46065006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 49918364 - 49918438
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  49918364 aaaatgggtagaaattaggg-ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt 49918438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 20762524 - 20762641
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||| |||||||||||||||||  |||||||   | ||||||| | || ||||||||| || |||||||    ||| | ||||| ||||||||    
T  20762524 cagattttgaaagagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagtt-ctcttgggttggga 20762622  T
Q  122 aacattgtaaacaccttgg 140  Q
    |||||||||||||||||||    
T  20762623 aacattgtaaacaccttgg 20762641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 295
Target Start/End: Original strand, 44455174 - 44455243
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatc 295  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  || ||||||||||||||||||||||||||    
T  44455174 aaaatgggtagaaattaggg-ttgttctttgtgaacttgttgaaactaatttcttgtaactcatttgtatc 44455243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 233 - 284
Target Start/End: Original strand, 22079336 - 22079388
Alignment:
Q  233 ggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaac 284  Q
    |||||||||||||| ||||||||||||||||| |  ||||||||||||||||||    
T  22079336 ggtagaaattatgt-ttgttctttgtgagcttgttaaagctaatttcttgtaac 22079388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 23555421 - 23555345
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| |  ||||||||||||| ||| |  || |||||||||| ||||||||||||||| ||||    
T  23555421 gaaaaatgggtagaaattaggg-ttgttctttgtgaacttgttgaaactaatttcttataactcatttgtatctcttt 23555345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 29136261 - 29136329
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtat 294  Q
    ||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||| ||| |||||||||    
T  29136261 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttggaacccatttgtat 29136329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 31925863 - 31925787
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| |  | |||| |||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  31925863 gaaaaatgggtagaaattagggat-gttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 31925787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 37560023 - 37559948
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt---aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |   |||||||||||||||||| |||||||||| ||||    
T  37560023 aaaatgggtagaaatta-gagttgttctttgtgaacttgttgaaagctaatttcttgtaacccatttgtatctcttt 37559948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 47115185 - 47115249
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcattt 290  Q
    ||||| ||||||||||| |  |||||||||||||||||  |||||||||||||||||||| |||||    
T  47115185 aaaattggtagaaattaggg-ttgttctttgtgagcttgtttaagctaatttcttgtaacccattt 47115249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 50167406 - 50167372
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||| |||||||||||||||||||||||||||||    
T  50167406 ctcttgggttgggaaacattgtaaacaccttgggt 50167372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 141
Target Start/End: Complemental strand, 13659567 - 13659534
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttggg 141  Q
    ||||||||||| ||||||||||||||||||||||    
T  13659567 ctcttaggttgagaaacattgtaaacaccttggg 13659534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 36683704 - 36683771
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgta 293  Q
    ||||| ||||||||||| || || ||||||||||| || |  |||||||||||||||||||||||||||    
T  36683704 aaaataggtagaaattaggt-ttattctttgtgagtttgttgaagctaatttcttgtaactcatttgta 36683771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 37503870 - 37503751
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||||||| |||||||||||  |||||||   | |||||||||| | |||||||||||| ||||||| | |   || || || |||||| |    
T  37503870 cagattttgaaggagaggttgaagagagagaaacttgggaaatcaaaggaggtgactttagggttgagggtctttg-attagagttctattgggttggaa 37503772  T
Q  122 aacattgtaaacaccttgggt 142  Q
    || ||||||||||||||||||    
T  37503771 aatattgtaaacaccttgggt 37503751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 97
Target Start/End: Complemental strand, 2263248 - 2263220
Alignment:
Q  69 ggaggtaattttagggttgagtgtctttg 97  Q
    |||||||||||||||||||||||||||||    
T  2263248 ggaggtaattttagggttgagtgtctttg 2263220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 3847275 - 3847201
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagct--tttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||||||||||| |  |||||||||| || ||||||| |||||||||| ||||    
T  3847275 aaaatgggtagaaatta-gggttgttctttgtgagtttgtttaagctaaatttttgtaacccatttgtatcccttt 3847201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Complemental strand, 13316549 - 13316517
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgg 140  Q
    ||||| |||||||||||||||||||||||||||    
T  13316549 ctcttgggttgggaaacattgtaaacaccttgg 13316517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 13549154 - 13549080
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagct--tttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||  || || |||||||| |||||| |||||||||| ||||    
T  13549154 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttaaacctaatttcatgtaacccatttgtatctcttt 13549080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 19752700 - 19752774
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||||||| |||||| |  ||||||||||||||||||  ||||||||| ||||    
T  19752700 aaaatgggtagaaattaggg-ttgttctttgcgagcttgttgaagctaatttcttgtaaccgatttgtatctcttt 19752774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 28265708 - 28265634
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||| ||||||||||| |  |||||| |||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  28265708 aaaataggtagaaattaggg-ttgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 28265634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 49918201 - 49918276
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttg 97  Q
    |||||||||||| ||||||||||||||||  |||||||   | |||||||||||| |||||||||||  |||||||    
T  49918201 cagattttgaagtagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaaggtctttg 49918276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 253; Significance: 1e-140; HSPs: 89)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 7 - 489
Target Start/End: Complemental strand, 40015291 - 40014812
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaagagaga--aactt-ggtttacaaaggaggtaattttagggttgagtgtctttgtagtga 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||  || || |||||||||||||||||| ||||||||||||||| |||||| |||    
T  40015291 tatttaagtgtttctgttcagattttgaagtagagcttgaagagagagaaatttaggtttacaaaggaggtaactttagggttgagtgt-tttgtattga 40015193  T
Q  104 ggtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgatt 203  Q
    ||| ||||| |||||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||||||| ||||||| ||||  ||||| ||||    
T  40015192 ggttctcttgggttgggaaacattgtaaacacattggatagtgagatttcaccattggaaggatcaaaaagcttccttttgtgatttt--tcttaggatt 40015095  T
Q  204 cattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttca 302  Q
     |||||||||||||||| | || |||||| |||||||||| ||||||||| |||||||| |||||||||||||||| | |||||||||||||||||||||    
T  40015094 tattgagagtgtgggtgacatg-aaaatgagtagaaattaggtcttgttcttttgtgagtttttaagctaatttctcgcaactcatttgtatcactttca 40014996  T
Q  303 tcttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggttaccatcttgtgtgtgtttgtttt-ctttcttgcttt 401  Q
    |||||||||||||||||| || ||| |       |||||| ||||||||||| | || |||||||||||||  ||| | |||||||| |||||||| |||    
T  40014995 tcttagtggattggagggatgttctct--ccctcagagtatgtcatattggatctaactgggttaccatct--tgtatatttgttttcctttcttggttt 40014900  T
Q  402 cttatcttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacacttt 489  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  40014899 cttatcttgttgctttgattatgcttgtggtgatgttttacacttagttttaggactgtttgttgttgttgttgcttgaggacacttt 40014812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 7 - 504
Target Start/End: Original strand, 15903620 - 15904118
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttgg-tttacaaaggaggtaattttagggttgagtgtctttgtagtga 103  Q
    |||||||||||||| |||||  |||||||| ||||||||||||||||  || |||| |||||||| |||||||  || ||||||| ||||||||||||||    
T  15903620 tatttaagtgtttcagttcaatttttgaagtagagcttgaagagagagaaatttgggtttacaaatgaggtaacctttgggttgaatgtctttgtagtga 15903719  T
Q  104 ggtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgatt 203  Q
    ||| ||||| |||| ||||||||||||||||| |||| || | | ||||||||||||||| ||| |||||| ||  |||||||  ||||||| || ||||    
T  15903720 ggttctcttgggttaggaaacattgtaaacacattggataatgagatttcaccattggaatgataaaaaagatttcttttgtg--ttttctcataggatt 15903817  T
Q  204 cattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcat 303  Q
    ||||||||||||||||| ||||||||||||||||||||||    ||||||||||||||||| |||||| |||||||||||| | ||||||||||||| ||    
T  15903818 cattgagagtgtgggtgacttgaaaaatgggtagaaattagaatttgttctttgtgagcttgtaagct-atttcttgtaacccctttgtatcacttttat 15903916  T
Q  304 cttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggttaccatcttgtgtgtgtttgttttctttcttgctttct 403  Q
    |||||||||||||||   | |||| |       |||||||||||||||||| |||| | ||||||||||||| |||| |||||||||||||||| |||||    
T  15903917 cttagtggattggagattttctctct--ccgtcagagtaggtcatattggatcgaactaggttaccatcttg-gtgtatttgttttctttcttgatttct 15904013  T
Q  404 tatcttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgt----ttgttgttgttgttgcttaaggacactttattcattgat 499  Q
    |||||||||  |||| ||||||||||||||||||||||||| ||||||||  |||||    |||||||||||||||||| |||| |||||  ||||||||    
T  15904014 tatcttgttcctttggttatgcttgtggtgatgttttacacatagttttagaactgtttcgttgttgttgttgttgcttgaggatactttgctcattgat 15904113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 11 - 504
Target Start/End: Original strand, 33528359 - 33528847
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |    
T  33528359 taagtgttcttgtgcagattttgaaggagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatc 33528458  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---a 205  Q
    |||| |||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||   |    
T  33528459 tcttgggttgggaaacattgtaaacacattgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtg--ttttctcttaggattcatta 33528556  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatct 305  Q
    |||||||| |||||| |    ||||||||||||||||| |||||||||||    ||||| ||||||||||||||||||||| |||||| ||||||||||     
T  33528557 ttgagagtttgggtgac--acaaaatgggtagaaattaggtcttgttctt----agcttataagctaatttcttgtaactcttttgtaacactttcatca 33528650  T
Q  306 tagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttct 403  Q
    ||||||||||||||| |||||| |       | | ||||||||||||||||||| |||||  || |||||| ||||||||| || ||||||| | ||  |    
T  33528651 tagtggattggagggttgctctct--ttcccatattaggtcatattggaccgaactgggtcaacaatcttg-gtgtgtttg-ttcctttctttcattgtt 33528746  T
Q  404 tatc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattac 502  Q
    |||| || ||| ||||||||||||||||||| || | |||| |||| | || | |||||| |||||||||||||||  ||||||||||| ||||||||||    
T  33528747 tatctttattgctttgattatgcttgtggtgttgctctacatttagatctaggtctgttt-ttgttgttgttgcttggggacactttatccattgattac 33528845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 63 - 475
Target Start/End: Original strand, 2869481 - 2869892
Alignment:
Q  63 tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattgga 162  Q
    |||||||||| ||| |||| |||||||||||||||||||||||| |||||  ||||| ||||||||||||||| ||||||||| | ||||| ||||||||    
T  2869481 tacaaaggagataactttacggttgagtgtctttgtagtgaggttctcttgagttggaaaacattgtaaacacattgggtagtgagatttcgccattgga 2869580  T
Q  163 aggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatg-tcttgttctttgtgag 261  Q
    || |||||||||||||  || |||  |||||||||| ||||||||||||||||||||| |||||||||||||||||||||| | | ||||||||||||||    
T  2869581 agaatcaaaaagcttccgttagtg--ttttctcttaggattcattgagagtgtgggtgacttgaaaaatgggtagaaattaggtttttgttctttgtgag 2869678  T
Q  262 cttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaatt 361  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||| |       ||||||||||||||||||||||| |    
T  2869679 cttttaagctaatttcttgtaactcctttgtatcactttcatcttagtggattggagagctactctct--cccctagagtaggtcatattggaccgaact 2869776  T
Q  362 gggt-taccatcttgtgtgtgtttgttttctttcttgcttt-cttatc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagact 458  Q
    ||||  || || ||| ||||||||||| |||| |||  ||| |||||| |||||| ||||| ||||||| ||||| || | ||||||||| |||| | ||    
T  2869777 gggtaaacaatattg-gtgtgtttgttctcttcctttatttgcttatctttgttgctttgaatatgcttatggtgttgctctacacttagatttaggtct 2869875  T
Q  459 gtttgttgttgttgttg 475  Q
     ||||||||||||||||    
T  2869876 atttgttgttgttgttg 2869892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 26 - 327
Target Start/End: Complemental strand, 21630292 - 21629989
Alignment:
Q  26 agattttgaaggagagcttgaag--agagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaa 123  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||  ||||| ||||||||||    
T  21630292 agattttgaaggagagcttgaagggagagaaacttggattacaaaggaggtaactttagtgttgagtgtctttgtagtgaggatctcttgggttgggaaa 21630193  T
Q  124 cattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---attgagagtgtgggtg 220  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||   ||||||||||||||||    
T  21630192 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtg--ttttctcttaggattcattattgagagtgtgggtg 21630095  T
Q  221 gcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagg 319  Q
     |    ||||||||||||||||| ||||||||||| ||| ||||| ||| ||||||||||||||||| |||||| |||||||||| |||||||||||||     
T  21630094 ac--acaaaatgggtagaaattaagtcttgttcttgtgtaagcttataaactaatttcttgtaactcttttgtaacactttcatcatagtggattggaga 21629997  T
Q  320 gctgctct 327  Q
    ||||||||    
T  21629996 gctgctct 21629989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 26 - 327
Target Start/End: Original strand, 14698759 - 14699058
Alignment:
Q  26 agattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaa 123  Q
    |||||||||||||||||||  ||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  ||||  ||||||||||    
T  14698759 agattttgaaggagagcttttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctctcgggttgggaaa 14698858  T
Q  124 cattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggct 223  Q
    |||||||||||||||||||||| | ||||||| |||||||||||||||||||||| |||||||  |||||||||| ||||||||||||||||||||| |     
T  14698859 cattgtaaacaccttgggtagtgagatttcactattggaaggatcaaaaagcttccttttgtg--ttttctcttaggattcattgagagtgtgggtgac- 14698955  T
Q  224 tgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggct 322  Q
       ||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||| |||||| | |||||||| |||||||||||||||||    
T  14698956 -acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaac-ctttcatcatagtggattggagggct 14699053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 47 - 504
Target Start/End: Complemental strand, 31056370 - 31055913
Alignment:
Q  47 agagagaaacttggtt-tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaacaccttgggta 143  Q
    ||||||||||||||   |||||||||||||| || |||||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||||||    
T  31056370 agagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggta 31056271  T
Q  144 gttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaatta 243  Q
    || | |||||||||||| ||||||||||||||||| |||||||  |||||||||| ||||||||||||||||||||| |    |||||||||||||||||    
T  31056270 gtgagatttcaccattgaaaggatcaaaaagcttccttttgtg--ttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtagaaatta 31056175  T
Q  244 tgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagta 342  Q
     ||||||||| ||||| ||||| ||||||||||| ||||||||| |||||| |||||||||||||||||||||||| |||||||| |       ||| ||    
T  31056174 ggtcttgttcttttgtaagcttataagctaatttattgtaactcttttgtaacactttcatcttagtggattggagagctgctctct--cccctagatta 31056077  T
Q  343 ggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgcttgtggtgatgttt 439  Q
    |||||||||| |||||| | |||  || |||||  |||||||||||   |||||| | || |||||| || ||| ||||||||||||||||||| || |     
T  31056076 ggtcatattgaaccgaactaggtcaacaatctttggtgtgtttgttccttttctttcattgcttatctttattgctttgattatgcttgtggtgttgctc 31055977  T
Q  440 tacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    ||||||||| |||| | |||||| |||||||||||||||   ||||||||||  |||||||||||    
T  31055976 tacacttagatttaggtctgttt-ttgttgttgttgcttggagacactttatctattgattacca 31055913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 11 - 504
Target Start/End: Complemental strand, 33118497 - 33118007
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| |||||||||||| |||||||  |||||||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |    
T  33118497 taagtgttcttgtgcagattttgaagaagagcttttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatc 33118398  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattg 208  Q
    |||| ||||||| |||||||||||||||||||||||| | ||||| |||||||||||||||||||||||| |||||||  |||||||||| |||||||||    
T  33118397 tcttgggttggggaacattgtaaacaccttgggtagtgagatttcgccattggaaggatcaaaaagcttccttttgtg--ttttctcttaagattcattg 33118300  T
Q  209 agagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctta 307  Q
    |||||| ||||| |    ||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||  |||||| | |||||||| ||    
T  33118299 agagtgagggtgac--acaaaatgggtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtaactattttgtaactctttcatcata 33118202  T
Q  308 gtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattg-ggttaccatcttgtgtgtgtttgttttctttcttgc-tttctta 405  Q
    |||||||||||||||||||| |       | | ||||||||||||||||||| || |   || |||||| ||||||||| || ||||||| | || ||||    
T  33118201 gtggattggagggctgctctct--cccccaaattaggtcatattggaccgaactgagccaacaatcttg-gtgtgtttg-ttcctttctttcattgctta 33118106  T
Q  406 tc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    || || ||  ||||||||||||||||||| || | ||||||||| |||| | |||||| ||||||||| || || | ||||||||||  |||||||||||    
T  33118105 tctttattactttgattatgcttgtggtgttgctctacacttagatttaggtctgttt-ttgttgttgatgtttgaagacactttatctattgattacca 33118007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 11 - 504
Target Start/End: Complemental strand, 34389213 - 34388730
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaag--agagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| |||||||||||||||||||||| |  |||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||  |    
T  34389213 taagtgttcttgtgcagattttgaaggagagcttgatgtgagagaaacttggattacaaaggaggtaactttagggttgtgtgtctttgtagtgaggatc 34389114  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--at 206  Q
    |||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||  ||    
T  34389113 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtg--ttttctcttaggattcatat 34389016  T
Q  207 tgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctt 306  Q
    || ||| ||||||| |    ||||||||||||||||| ||||||||| |||||      ||||||||||||||||||||| |||||| |||||||||| |    
T  34389015 tgtgagagtgggtgac--acaaaatgggtagaaattaggtcttgttc-ttgtg------taagctaatttcttgtaactcttttgtaacactttcatcat 34388925  T
Q  307 agtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgcttt-ctt 404  Q
    |||||||||||| ||| |||| |       ||| |||||||||||||||||||||||||  || |||| | ||||||||| || ||||||| ||||  ||    
T  34388924 agtggattggagagctactctct--cccccagattaggtcatattggaccgaattgggtcaacaatctcg-gtgtgtttg-ttcctttctttctttgttt 34388829  T
Q  405 atcttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    |||||  || ||||||| ||||||||||| || | ||||||||| | || | |||||| ||||||||||||||| | |||||||||   |||||||||||    
T  34388828 atctttgtgctttgattttgcttgtggtgttgctctacacttagatctaggtctgttt-ttgttgttgttgcttgaagacactttacatattgattacca 34388730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 11 - 327
Target Start/End: Complemental strand, 17865566 - 17865249
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga-aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtact 109  Q
    ||||||||  ||| || ||||||||| |||||||||||||| | ||||||| ||||||||||||||| |||||||||||||||||||||||||| |  ||    
T  17865566 taagtgttcttgtgcaaattttgaagaagagcttgaagagacagaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaagatct 17865467  T
Q  110 cttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---at 206  Q
    ||| |||||||||||||||||||||||||||||||| | ||||||| | | |||||||||||||||||| |||||||  |||||||||| |||||   ||    
T  17865466 cttgggttgggaaacattgtaaacaccttgggtagtgagatttcacaaatagaaggatcaaaaagcttccttttgtg--ttttctcttaggattcattat 17865369  T
Q  207 tgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatct 305  Q
    ||||||||||| || | |  ||||| ||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| |||||| ||||||||||     
T  17865368 tgagagtgtggatgacat--aaaataggtagaaattatgtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatca 17865271  T
Q  306 tagtggattggagggctgctct 327  Q
    ||||||||||||||| ||||||    
T  17865270 tagtggattggagggttgctct 17865249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 25 - 504
Target Start/End: Complemental strand, 20522570 - 20522091
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    ||||||||||||| ||||||| |||||||  ||||| | ||||||||||||||| |||||||||||||||||||||||||||   ||||| |||||||||    
T  20522570 cagattttgaaggtgagcttggagagagagaaacttagattacaaaggaggtaactttagggttgagtgtctttgtagtgagtatctcttgggttgggaa 20522471  T
Q  123 acattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---attgagagtgtgggt 219  Q
     ||||||||||| |||||||||| | ||||||||||| ||| |||||||||||||| ||||||||||||  ||||| || ||   |||||||||||||||    
T  20522470 gcattgtaaacaacttgggtagtgagatttcaccatttgaatgatcaaaaagcttccttttgtgttttt--tcttaggactcattattgagagtgtgggt 20522373  T
Q  220 ggcttgaaaaatgggtagaaattatgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggag 318  Q
    | |    ||||||||||||||||| ||||||||| ||||| ||||| ||| ||||||||||||||| | |||||| |||||||||| |||||||||||||    
T  20522372 gac--acaaaatgggtagaaattaagtcttgttcttttgtaagcttataatctaatttcttgtaacccttttgtaacactttcatcatagtggattggag 20522275  T
Q  319 ggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgat 415  Q
    || |||||| |       ||| ||||||||||||||||||| |||||  || |||||| ||||||||| || ||||||| | ||||||||| || ||| |    
T  20522274 ggttgctctct--cccccagattaggtcatattggaccgaactgggtcaacaatcttg-gtgtgtttg-ttcctttctttcatttcttatctttattgct 20522179  T
Q  416 ttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    |||||||||||||||||| || | ||||||||| | || | || ||| |||||||| ||||||   |||||||||| ||||||||||||    
T  20522178 ttgattatgcttgtggtgttgctctacacttagatctatgtct-ttttttgttgtttttgcttggagacactttatccattgattacca 20522091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 11 - 504
Target Start/End: Complemental strand, 13569692 - 13569199
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttga---agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggta 107  Q
    ||||||||  ||| |||||||| ||||||||||||    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||||||      
T  13569692 taagtgttcttgtgcagattttaaaggagagcttgggagagagagaaacttggattacaaatgagataactttagggttaagtgtctttgtagtgaggat 13569593  T
Q  108 ctcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--a 205  Q
    ||||| |||||||||||||| |||||||||||| |||| | |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||  |    
T  13569592 ctcttgggttgggaaacattataaacaccttggatagtgagatttcaccattggaaggatcaaaaagcttccttttgtg--ttttctcttaggattcata 13569495  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
    ||| ||| ||||||| |   || || |||||||||||| ||||||||||| ||| | ||| ||||||||||||||||||||| |||||| ||||||||||    
T  13569494 ttgtgagagtgggtgac--aaacaaagggtagaaattaggtcttgttcttgtgtaaacttataagctaatttcttgtaactcttttgtaacactttcatc 13569397  T
Q  305 ttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggttaccatcttgtgtgtgtttgttttctttcttgc-tttct 403  Q
     ||||||||||||| |||||||| |       ||| ||||||||||||||||||| ||||| | ||  ||  ||||||||  || ||||||| | ||  |    
T  13569396 atagtggattggagagctgctctct--cccccagattaggtcatattggaccgaactgggtcaacaattttggtgtgttt-attcctttctttcattgat 13569300  T
Q  404 tatcttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacc 503  Q
    ||||||  || ||||||||||||||||||| |  | || |||||| | |||| |||||| |||||||||||| ||   |||||||||  |||||||||||    
T  13569299 tatctttgtgctttgattatgcttgtggtgtttctctatacttagatctaagcctgttttttgttgttgttgtttggagacactttacacattgattacc 13569200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 11 - 318
Target Start/End: Original strand, 10706987 - 10707294
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| |||||||||||| |||||| ||||||  |||||||| | ||||||||||||||| ||||||||| | | ||||||||||||||  |    
T  10706987 taagtgttcttgtgcagattttgaagaagagctggaagagagagaaacttagattacaaaggaggtaactttagggtttattatctttgtagtgaggatc 10707086  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--at 206  Q
    |||| ||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||  |||||||||| |||||  ||    
T  10707087 tcttgggttgagaaacattgtaaacaccttgggtagttagatttcaccattagaaggatcaaaaagcttccttttgtg--ttttctcttaggattcatat 10707184  T
Q  207 tgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatct 305  Q
    || ||| ||||||| |   | | |||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||| |||||| ||||||||||     
T  10707185 tgtgagagtgggtgac---acagatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatca 10707281  T
Q  306 tagtggattggag 318  Q
    |||||||||||||    
T  10707282 tagtggattggag 10707294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 47 - 504
Target Start/End: Complemental strand, 8040391 - 8039931
Alignment:
Q  47 agagagaaacttggtt-tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaacaccttgggta 143  Q
    |||||||||||||||  |||||||||||||| |||| ||||||||||||||||||||| || |||||   ||||||||||||||||||||||||||||||    
T  8040391 agagagaaacttggtaatacaaaggaggtaactttatggttgagtgtctttgtagtgaagttctcttgagggttgggaaacattgtaaacaccttgggta 8040292  T
Q  144 gttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--attgagagtgtgggtggcttgaaaaatgggtagaaat 241  Q
    || | |||||||||||||||||||||||||||||| |||| || ||||||||||| |||||  |||| ||| ||||||| |    |||||||||||||||    
T  8040291 gtgagatttcaccattggaaggatcaaaaagcttccttttatg-tttttctcttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaat 8040195  T
Q  242 tatgtcttgttctt-tgtgagcttttaagctaatttcttgtaa--ctcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnag 338  Q
    || ||||||||||| ||| ||||| ||||||||||||||||||  ||| |||||| |||||||||| ||||||||||||| |||||||| |       ||    
T  8040194 taggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactctcttttgtaacactttcatcatagtggattggagagctgctctct--cccccag 8040097  T
Q  339 agtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttct-ttcttgctttcttatc-ttgttgatttgattatgcttgtggtgat 435  Q
    | ||||||||||||||| ||| |||||  || ||||||  ||| ||| ||| || | |||  || |||||| || ||| ||||||||||||||||||| |    
T  8040096 attaggtcatattggactgaactgggtcaacaatcttg-atgtattt-tttcctctccttcattgcttatctttattgctttgattatgcttgtggtgtt 8039999  T
Q  436 gttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    | | ||||||||| |||| | |||||| ||||||||||||||| | ||||||||||  |||||||||||    
T  8039998 gctctacacttagatttaggtctgttt-ttgttgttgttgcttgaagacactttatctattgattacca 8039931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 7 - 327
Target Start/End: Original strand, 8389880 - 8390201
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgag 104  Q
    |||||||||||| |||| |||||||||||| |||||| ||||||  |||||||||| ||||||||||| ||| |||||||||||| |||||||||||||     
T  8389880 tatttaagtgttcctgtgcagattttgaagtagagctggaagagagagaaacttggattacaaaggagataactttagggttgagggtctttgtagtgat 8389979  T
Q  105 gtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc 204  Q
    |  ||||| |||| |||||||||||||||||||||| |||| | |||| ||||||||||| ||||||||||||| | |||||  |||||||||| |||||    
T  8389980 gatctcttgggttaggaaacattgtaaacaccttggatagtgagattttaccattggaagaatcaaaaagcttcctcttgtg--ttttctcttaggattc 8390077  T
Q  205 --attgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttc 301  Q
      |||| ||| ||||||| |    ||||||||||||||||| ||||||||||| ||  ||||| ||||||||||||||||||||| ||| || |||||||    
T  8390078 atattgtgagagtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcttgtaactcttttttaacactttc 8390175  T
Q  302 atcttagtggattggagggctgctct 327  Q
    ||| ||||||||||||| ||||||||    
T  8390176 atcatagtggattggagagctgctct 8390201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 67 - 475
Target Start/End: Complemental strand, 39483237 - 39482830
Alignment:
Q  67 aaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaagga 166  Q
    |||||| ||| ||||||||||||||||||||| ||||||  ||||| |||||||||| ||||||||||||||||||||| | ||||||||||||||| ||    
T  39483237 aaggagataactttagggttgagtgtctttgttgtgaggatctcttgggttgggaaatattgtaaacaccttgggtagtgagatttcaccattggaatga 39483138  T
Q  167 tcaaaaagcttcattttgtgttttttctcttatgattc---attgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagc 262  Q
    ||||||| |||| |||||||  |||||||||| |||||   |||||||||||||||| | |  ||||||||||||||||| ||||||||||| ||| |||    
T  39483137 tcaaaaaacttccttttgtg--ttttctcttaggattcattattgagagtgtgggtgacat--aaaatgggtagaaattaggtcttgttcttgtgtaagc 39483042  T
Q  263 ttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattg 362  Q
    || ||||||||||||||||||||| |||||| || ||||||| |||||||||||||| ||||||| |       | | ||||||||||||||||||| |     
T  39483041 ttataagctaatttcttgtaactcttttgtaacattttcatcatagtggattggaggcctgctctct--cccccatattaggtcatattggaccgaacta 39482944  T
Q  363 ggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactg 459  Q
    |||  || |||||| ||||||||| || || |||| | ||  ||||| || ||| |||| |||||||||||||| |||| ||||||||| |||| | |||    
T  39482943 ggtcaacaatcttg-gtgtgtttg-ttcctctctttcattgtttatctttattgctttggttatgcttgtggtgttgttctacacttagatttaggtctg 39482846  T
Q  460 tttgttgttgttgttg 475  Q
    ||| ||||||||||||    
T  39482845 ttttttgttgttgttg 39482830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 63 - 365
Target Start/End: Original strand, 2837816 - 2838117
Alignment:
Q  63 tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaacaccttgggtagttaca-tttcaccatt 159  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||| |||| | | ||||||||||    
T  2837816 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggatagtgagaatttcaccatt 2837915  T
Q  160 ggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtg 259  Q
    |||||||| |||||  ||| ||| |||||||  |||||| ||||||||||||  ||||||| | ||||||||||| | |||||| ||  |||||||||||    
T  2837916 ggaaggataaaaaatattcctttagtgtttt--ctcttaggattcattgagaaggtgggtgacatgaaaaatgggcaaaaattaggttgtgttctttgtg 2838013  T
Q  260 agcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaa 359  Q
    |||| ||   |||||||||||||||||||||||||||||||||| ||||||||||||||   |||||| |       |||||||||||||||||||||||    
T  2838014 agctcttgtactaatttcttgtaactcatttgtatcactttcattttagtggattggagatgtgctctct--cccccagagtaggtcatattggaccgaa 2838111  T
Q  360 ttgggt 365  Q
     |||||    
T  2838112 ctgggt 2838117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 11 - 504
Target Start/End: Original strand, 23078206 - 23078698
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaag--agagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||||||||||||||||||||||||  |||||||||||| ||||||||||||||| ||| |||||||||||||||||  ||||   |    
T  23078206 taagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaacttggattacaaaggaggtaacttttgggttgagtgtctttgtgatgagaatc 23078305  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgat---tca 205  Q
    |||| |||||||||||||||||||||||||||||||| | |||||| ||||||||||||| ||||||||| |||||||  | |||||||| | |   |||    
T  23078306 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcatcattggaaggatc-aaaagcttccttttgtg--tcttctcttagggttcatca 23078402  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
    ||||||||||||||  |   | |||||||||||||||| ||||||||||| ||| |||||  |||||| ||||||||||||| ||| || ||||||||||    
T  23078403 ttgagagtgtgggtaac---acaaatgggtagaaattaagtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttctaacactttcatc 23078498  T
Q  305 ttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggttacca-tcttgt-gtgtgtttgttttctttcttgc-ttt 401  Q
     ||||||||||||| | || ||| |       | | |||||||||||||| |||| ||||| | || |||| | ||||||||| || | ||||| | ||     
T  23078499 atagtggattggagagttgttctct--cccccatattaggtcatattggatcgaactgggtcaacattcttttggtgtgtttg-ttccattctttcattg 23078595  T
Q  402 cttatcttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgatta 501  Q
    ||||||||  || ||||||||||||||||||| || | ||||||||| | || |  ||||| |||||||||||||||   |||||||||  |||||||||    
T  23078596 cttatctttgtgctttgattatgcttgtggtgttgctctacacttagatctaggtatgttttttgttgttgttgcttggagacactttacacattgatta 23078695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 47 - 511
Target Start/End: Original strand, 34682103 - 34682567
Alignment:
Q  47 agagagaaacttggtt-tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctt-ag-gttgggaaacattgtaaacaccttgggta 143  Q
    ||||||||||||||   |||||||||||||| ||||||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||||||    
T  34682103 agagagaaacttgggaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagagttggaaaacattgtaaacaccttgggta 34682202  T
Q  144 gttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattca--ttgagagtgtgggtggcttgaaaaatgggtagaaat 241  Q
    || | ||||||||| | |||||||||||| | ||| |||||||  |||||||||| ||||||  ||| ||| ||||||| |    |||||||||||||||    
T  34682203 gtgagatttcaccacttgaaggatcaaaatgtttccttttgtg--ttttctcttaggattcaccttgtgagagtgggtgac--acaaaatgggtagaaat 34682298  T
Q  242 tatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagag 340  Q
    || ||||||||||| ||| ||| | ||||||||||||||||||||| |||||| |||||||||  ||||||||||||| |||||||| |       |||     
T  34682299 taagtcttgttcttgtgtaagcctgtaagctaatttcttgtaactcttttgtaacactttcattatagtggattggagagctgctctct--cccccagat 34682396  T
Q  341 taggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttat-cttgttgatttgattatgcttgtggtgatgt 437  Q
    || |||||||||||||||| |||||  || |||||| ||||||||| || || |||| | || |||||  || ||  ||||||||||||||||||| ||     
T  34682397 tatgtcatattggaccgaactgggtcaacaatcttg-gtgtgtttg-ttcctctctttcattgcttatatttatttgtttgattatgcttgtggtgttgc 34682494  T
Q  438 tttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattaccattttctt 511  Q
    | ||||||||| |||| | |||||| |||||||||||||||   ||||||||||  ||||||||||| ||||||    
T  34682495 tctacacttagatttaggtctgttt-ttgttgttgttgcttggagacactttatctattgattaccactttctt 34682567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 26 - 327
Target Start/End: Original strand, 28258927 - 28259228
Alignment:
Q  26 agattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaa 123  Q
    ||||||||||| |||||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||  ||||| ||||||||||    
T  28258927 agattttgaagaagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttatagtgaggatctcttgggttgggaaa 28259026  T
Q  124 cattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---attgagagtgtgggtg 220  Q
    ||||||||||| |||||||||| | |||||||||||||||||||| ||||||||| |||||||| || ||| ||| |  ||   |||||||| |||||      
T  28259027 cattgtaaacatcttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctct-ttaggggtcattattgagagagtgggaa 28259124  T
Q  221 gcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagg 319  Q
     |   | ||||||||||||||||  |||||||||| ||| |||||  |||||| ||||||||||||| |||||| |||||||||| |||||||||||||     
T  28259125 ac---acaaatgggtagaaattagatcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggaga 28259220  T
Q  320 gctgctct 327  Q
    ||||||||    
T  28259221 gctgctct 28259228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 11 - 504
Target Start/End: Original strand, 36757497 - 36757987
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaag--agagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||||||||||||||||||||||||  |||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||  |    
T  36757497 taagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaacttgaattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatc 36757596  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgat---tca 205  Q
    |||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| |||||||| || ||| ||| | |   |||    
T  36757597 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctct-ttagggttcatca 36757694  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
    ||||||| ||||||  |   | |||||||||||||||| || |||||||| ||| |||||  |||||  |||||| |||||| |||| | ||||||||||    
T  36757695 ttgagagagtgggtaac---acaaatgggtagaaattaggttttgttcttgtgtaagcttgaaagcttttttcttataactc-tttgaaacactttcatc 36757790  T
Q  305 ttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgt-gtgtgtttgttttctttcttgc-ttt 401  Q
     || |||||||||| ||||   | |       ||| |||||||||||||||||||||||||  || ||||| | ||||||||| || ||||||| | ||     
T  36757791 atactggattggagagctg--ttatcccccccagattaggtcatattggaccgaattgggtcaacaatcttttggtgtgtttg-ttcctttctttcattg 36757887  T
Q  402 cttatcttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgatta 501  Q
    ||||||||  || |||| |||||||||||||| || | |||||| || | || | |||||  |||||||||||||||   |||||||||  |||||||||    
T  36757888 cttatctttgtgctttgtttatgcttgtggtgttgctctacactaag-tctaggtctgtt--ttgttgttgttgcttggagacactttacacattgatta 36757984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 63 - 325
Target Start/End: Complemental strand, 35397817 - 35397560
Alignment:
Q  63 tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattgga 162  Q
    |||||||||||| | ||||||||||| ||||||||||||||||| ||  | |||||| |||||||||||  |||||||||||| | ||||||||||||||    
T  35397817 tacaaaggaggtcactttagggttgattgtctttgtagtgaggttcttctgggttggaaaacattgtaattaccttgggtagtgagatttcaccattgga 35397718  T
Q  163 aggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagc 262  Q
    |||||||| || |||||  |  ||| |||||||||| |||||||||||| |||||||| |||||||||||| ||||||||| || ||||||||| ||| |    
T  35397717 aggatcaataa-cttcaaat--tgtattttctcttaggattcattgagattgtgggtgacttgaaaaatggatagaaattaggt-ttgttctttatgacc 35397622  T
Q  263 ttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgct 325  Q
    |||||||||||||| | |||||   ||| |||||||||||||||||||||||| || ||||||    
T  35397621 ttttaagctaattt-tcgtaacctctttatatcactttcatcttagtggattgaagagctgct 35397560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 187 - 507
Target Start/End: Original strand, 27149205 - 27149525
Alignment:
Q  187 ttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactc 286  Q
    |||||||||||| ||||||||| ||||||||||| ||| |||||  ||||||| ||| ||||||||||||||||||||||||| ||||||||||| || |    
T  27149205 ttttttctcttaggattcattgtgagtgtgggtgacttaaaaaacaggtagaagttaagtcttgttctttgtgagcttttaaggtaatttcttgttaccc 27149304  T
Q  287 atttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggttacca-tcttgtgtgtgtttg 385  Q
     ||||||||||||||||  ||||||||||||| |||||||| |       | |||||||||||||||||| || | |||||||| |||  ||||||||||    
T  27149305 ctttgtatcactttcattatagtggattggagagctgctctct--cccccatagtaggtcatattggaccaaacttggttaccagtct--tgtgtgtttg 27149400  T
Q  386 ttttctttcttgctttcttatctt--gttgatttgattatgcttgtggtgatgttttacacttagttttaagact-gtttgttgttgttgttgcttaagg 482  Q
    ||||| || ||||| |||||||||  |||||||||| |||| || ||||  || ||||||| ||| ||||  |||  ||||||||| ||||| ||| |||    
T  27149401 ttttcattattgctctcttatctttagttgatttgaatatgtttatggtattgctttacacatagatttagaactattttgttgttattgttacttgagg 27149500  T
Q  483 acactttattcattgattaccattt 507  Q
      |||||| ||||||||||||||||    
T  27149501 ctactttactcattgattaccattt 27149525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 47 - 186
Target Start/End: Original strand, 10445240 - 10445379
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagtt 146  Q
    |||||||||||| | ||||||||||||||| ||||||||||| ||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||     
T  10445240 agagagaaacttagattacaaaggaggtaactttagggttgaatgtctttgtagtgaggttctctcgggttgggaaacattgtaaacaccttgggtagtg 10445339  T
Q  147 acatttcaccattggaaggatcaaaaagcttcattttgtg 186  Q
    | |||||||||||||||||||||||||||||| |||||||    
T  10445340 agatttcaccattggaaggatcaaaaagcttccttttgtg 10445379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 40739162 - 40739033
Alignment:
Q  43 ttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||||||||| |||||||||||| || | ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||    
T  40739162 ttgaagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggt 40739063  T
Q  143 agttacatttcaccattggaaggatcaaaa 172  Q
    | | | ||||||||||||||||||||||||    
T  40739062 aatgagatttcaccattggaaggatcaaaa 40739033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 109 - 327
Target Start/End: Original strand, 18674235 - 18674452
Alignment:
Q  109 tcttaggttgggaaacatt-gtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcatt 207  Q
    |||| |||||||||||||| |||||||||||| | ||| | ||||||  |||| ||||||||||||||||| |||  ||||||  |||||||||||||||    
T  18674235 tcttgggttgggaaacattcgtaaacaccttgagcagtgagatttcattattg-aaggatcaaaaagcttcctttaatgtttt--ctcttatgattcatt 18674331  T
Q  208 ga-gagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctt 306  Q
     | ||||||||||| |||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||| | || |||||||| |  || |    
T  18674332 tatgagtgtgggtgacttgaaaaatggatagaaattatggtttgttctttgtgagcttttaaactaatttcttgtaaccccttggtatcactcttgtcat 18674431  T
Q  307 agtggattggagggctgctct 327  Q
    ||| ||| |||| ||||||||    
T  18674432 agtagatcggagagctgctct 18674452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 7 - 327
Target Start/End: Complemental strand, 3492118 - 3491796
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggt 106  Q
    ||||||||||||  ||| ||||||||| || | |||||  |||||||||||||| |||||||||||| || | ||||||||||||||||||||||||||     
T  3492118 tatttaagtgttcttgtgcagattttggagtaaagcttagagagagaaacttggattacaaaggagggaaatctagggttgagtgtctttgtagtgagga 3492019  T
Q  107 actcttaggttgg--gaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc 204  Q
     ||||| ||||||   ||||||||||||||||||||||||| | ||| ||||||||||||||||   ||||||| | |||||| || ||| ||| | |||    
T  3492018 tctcttgggttggaaaaaacattgtaaacaccttgggtagtgagattccaccattggaaggatc-ttaagcttcctcttgtgtcttctcttttagggttc 3491920  T
Q  205 --attgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcacttt 300  Q
      |||| ||| ||||  ||    | ||||||||||||  || ||||||||||| ||| |||||  ||||||  ||||||||||| | |||||| ||||||    
T  3491919 atattgtgagagtgg--ggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaac-cctttgtaacacttt 3491823  T
Q  301 catcttagtggattggagggctgctct 327  Q
    |||| ||||||||||||| ||||||||    
T  3491822 catcatagtggattggagagctgctct 3491796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 227 - 504
Target Start/End: Original strand, 10445394 - 10445671
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgct 325  Q
    ||||||||||||||||| ||||||||||| ||| || || ||||||||||||||||||||| |||||| |||||||||  ||||||||||||| ||||||    
T  10445394 aaaatgggtagaaattaggtcttgttcttgtgtaagattgtaagctaatttcttgtaactcttttgtaacactttcataatagtggattggagagctgct 10445493  T
Q  326 ctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgatta 422  Q
    || |       ||| ||||||||||||||||||| ||| |  || |||||| ||||||||| || || |||| | || |||||| || ||| ||||||||    
T  10445494 ctct--cccccagattaggtcatattggaccgaactggatcaacaatcttg-gtgtgtttg-ttcctctctttcattgcttatctttattgctttgatta 10445589  T
Q  423 tgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    ||||||||||  || | ||||||||| |||| | |||||| |||||||||||||||   |||||||||| ||||||||||||    
T  10445590 tgcttgtggttttgctctacacttagatttaggtctgttttttgttgttgttgcttggagacactttatccattgattacca 10445671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 189 - 365
Target Start/End: Original strand, 1345454 - 1345628
Alignment:
Q  189 ttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcat 288  Q
    |||||| ||||||||||||||||||| ||||| | |||||||||||||||||||| ||  |||| ||||||||||  |  |||||||||||| |||||||    
T  1345454 ttttcttttatgattcattgagagtgggggtgacatgaaaaatgggtagaaattaggttgtgtt-tttgtgagctcatgtgctaatttcttgcaactcat 1345552  T
Q  289 ttgtatcactttcatctt-agtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt 365  Q
    |||||||||||||||||| ||||||| |||| | |||||| |       ||||||||||||||||||||||| |||||    
T  1345553 ttgtatcactttcatcttaagtggatcggagaggtgctctct--cccccagagtaggtcatattggaccgaactgggt 1345628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 109 - 283
Target Start/End: Original strand, 28770608 - 28770781
Alignment:
Q  109 tcttaggttgggaaacatt-gtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcatt 207  Q
    |||| |||||| ||||||| |||||||||||||||||| | || |||  |   ||||||| |||||| ||| ||| |||||||  |||||| ||||||||    
T  28770608 tctttggttggaaaacatttgtaaacaccttgggtagtgagatctcattagctgaaggataaaaaagtttcctttagtgtttt--ctcttaggattcatt 28770705  T
Q  208 gagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaa 283  Q
    | |||||||  || ||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||    
T  28770706 gcgagtgtgtatgacttgaaaaatgggtagaaattagagtttgttctttgtgagcttttaagctaatttcttgtaa 28770781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 1344333 - 1344435
Alignment:
Q  63 tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctt-aggttgggaaacattgtaaacaccttgggtagtta-catttcaccattg 160  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| |||||| |  ||||||||||||    
T  1344333 tacaaatgaggtaattttagggttgagtgtctttgtagtgaggttctcttgaggttgggaaacattgtaaacatcttcggtagtgagaatttcaccattg 1344432  T
Q  161 gaa 163  Q
    |||    
T  1344433 gaa 1344435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 260 - 504
Target Start/End: Original strand, 16940193 - 16940435
Alignment:
Q  260 agcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaa 359  Q
    ||||| |||||||||||||||||| || |||||| |||||||||| |||||||||||||||||| |||||       ||| || ||||||||||||||||    
T  16940193 agcttataagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatcttt--cccccagattatgtcatattggaccgaa 16940290  T
Q  360 ttgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaaga 456  Q
    ||||||  || |||||| ||||||||| || ||||||| | || |||||| || ||| ||||||||||||| |||||  | | | ||||||| | || |     
T  16940291 ttgggtcaacaatcttg-gtgtgtttg-ttcctttctttcattgcttatctttattgctttgattatgcttttggtgtcgctctgcacttagatctaggt 16940388  T
Q  457 ctgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    |||||| ||||||||||||| ||  |||||||||||||||||||||||    
T  16940389 ctgttt-ttgttgttgttgcatagagacactttattcattgattacca 16940435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 260 - 504
Target Start/End: Original strand, 17010858 - 17011100
Alignment:
Q  260 agcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaa 359  Q
    ||||| |||||||||||||||||| || |||||| |||||||||| |||||||||||||||||| |||||       ||| || ||||||||||||||||    
T  17010858 agcttataagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatcttt--cccccagattatgtcatattggaccgaa 17010955  T
Q  360 ttgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaaga 456  Q
    ||||||  || |||||| ||||||||| || ||||||| | || |||||| || ||| ||||||||||||| |||||  | | | ||||||| | || |     
T  17010956 ttgggtcaacaatcttg-gtgtgtttg-ttcctttctttcattgcttatctttattgctttgattatgcttttggtgtcgctctgcacttagatctaggt 17011053  T
Q  457 ctgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    |||||| ||||||||||||| ||  |||||||||||||||||||||||    
T  17011054 ctgttt-ttgttgttgttgcatagagacactttattcattgattacca 17011100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 38 - 160
Target Start/End: Complemental strand, 25409966 - 25409842
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| ||||| |||||| ||   ||||||||||||||||||||| ||||  ||||| |||||||  |||||||||||||||    
T  25409966 agagcttagagagagaaacttggattacagaggagggaacactagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaacac 25409867  T
Q  136 cttgggtagttacatttcaccattg 160  Q
    |||||||||| | ||||||||||||    
T  25409866 cttgggtagtgagatttcaccattg 25409842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 42269696 - 42269605
Alignment:
Q  47 agagagaaacttggtt-tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctt--aggttgggaaacattgtaaacac 135  Q
    ||||||||||||||   |||||||||||||| |||| |||||||||||||||||||||||| |||||   ||||||||||||||||||||||    
T  42269696 agagagaaacttgggaatacaaaggaggtaactttaaggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacac 42269605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 39284737 - 39284856
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||||||| |||||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | |   || ||||| ||||||||    
T  39284737 cagattttgaaggagaggttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg-attagagttctcttgggttggga 39284835  T
Q  122 aacattgtaaacaccttgggt 142  Q
    |||||||||||||||||||||    
T  39284836 aacattgtaaacaccttgggt 39284856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 11151745 - 11151671
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||||||||||||||  | |||||||||||||||||  |||||||||||||||||||| |||||||||||||||    
T  11151745 aaaatgggtagaaattagat-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcacttt 11151671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 11690515 - 11690589
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| || |||||||||||||||||  |||||||||||||||||||| |||||||||| ||||    
T  11690515 aaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 11690589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 288
Target Start/End: Complemental strand, 14202559 - 14202497
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcat 288  Q
    |||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  14202559 aaaatgggtagaaattatgt-ttgttctttgtgagcttgtttaagctaatttcttgtaactcat 14202497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 42362366 - 42362440
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| || |||||||||||||||||  |||||||||||||||||||| |||||||||| ||||    
T  42362366 aaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 42362440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 723900 - 723824
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||| ||||||||||||| || |||||||||||||||||  |||||||||||||||||||| |||||||||| ||||    
T  723900 gaaaactgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 723824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 11098684 - 11098793
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| |||||||||||| ||    |||||||||||||||||||| |||   ||||| |||||||  ||||||||||| |||    
T  11098684 agagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcac 11098783  T
Q  136 cttgggtagt 145  Q
    ||||||||||    
T  11098784 cttgggtagt 11098793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 284
Target Start/End: Complemental strand, 3278307 - 3278090
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacatt-gtaaacaccttgggtagttacatttcaccattggaa 163  Q
    |||| ||||||| ||||||||||||| || |||  | ||| | ||||| |||||| ||||||| ||||||||||||| |||| | ||||||  || |||     
T  3278307 caaatgaggtaactttagggttgagtatcgttgatgagagattctcttgggttggaaaacatttgtaaacaccttggatagtgagatttcattataggac 3278208  T
Q  164 ggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagct 263  Q
    |||||||||| |||| ||| | |  |||||||||| | ||||||| ||||||| |||  |||||||||| | ||||||      |||||| ||||||| |    
T  3278207 ggatcaaaaaacttcctttagcg--ttttctcttagggttcattgtgagtgtgagtgaattgaaaaatgagaagaaatcggaatttgttc-ttgtgaggt 3278111  T
Q  264 tttaagctaatttcttgtaac 284  Q
    |||||||||||||||| ||||    
T  3278110 tttaagctaatttcttataac 3278090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 33162723 - 33162647
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||||||||||||||||||||||| ||||||| | |  ||| |||||  ||||||||||||||||||||||||||||    
T  33162723 caaaggaggtaattttagggttgagggtctttg-attagggttctcttgagttgggaaacattgtaaacaccttgggt 33162647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 14633980 - 14633906
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||||||||||||||  |||||||||||||||||||| |||||||||| ||||    
T  14633980 aaaatgggtagaaattagga-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 14633906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 28 - 140
Target Start/End: Complemental strand, 36988388 - 36988274
Alignment:
Q  28 attttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaac 124  Q
    ||||||||||||||||||||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | |   || ||||| |||||||||||    
T  36988388 attttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg-attagagttctcttgggttgggaaac 36988290  T
Q  125 attgtaaacaccttgg 140  Q
    || |||||||||||||    
T  36988289 atagtaaacaccttgg 36988274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 2334733 - 2334616
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||| |||||||||||||||  |||||||   | |||||||||||| |||||||||||| || ||||    ||| | ||||| ||||||||    
T  2334733 cagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtatttgattagagtt-ctcttgggttggga 2334635  T
Q  122 aacattgtaaacaccttgg 140  Q
    |||||||||||||||||||    
T  2334634 aacattgtaaacaccttgg 2334616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 11067317 - 11067393
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| || |||| |||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  11067317 gaaaaatgggtagaaatta-gtgttgtactttgtgagcttgtcaaagctaatttcttgtaacccatttgtatctcttt 11067393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 327
Target Start/End: Original strand, 42039619 - 42039720
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaa-tttcttgtaactcatttgtatcactttcatcttagtggattggagggctgc 324  Q
    ||||||||||||||||| |||||||| || ||| |||||  ||||||| ||||||||||||| || ||| |||||||||| ||||||||| ||| |||||    
T  42039619 aaaatgggtagaaattaggtcttgtttttgtgtaagcttgcaagctaattttcttgtaactc-ttcgtaacactttcatcatagtggattagagagctgc 42039717  T
Q  325 tct 327  Q
    |||    
T  42039718 tct 42039720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 11151864 - 11151788
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||| |||||||||||| |||||||    ||| | ||||| |||||||||||||||||||||||||||||    
T  11151864 caaaggaggtaactttagggttgagggtctttgattagagtt-ctcttgggttgggaaacattgtaaacaccttgggt 11151788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 11690396 - 11690472
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||| |||||||||||| ||||||| | |   || ||||| |||||||||||||||||||||||||||||    
T  11690396 caaaggaggtaactttagggttgagggtctttg-attatagttctcttgggttgggaaacattgtaaacaccttgggt 11690472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 24885675 - 24885742
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgta 293  Q
    |||||| |||||||||| || |||||||||||||||||  |||||||||||||||||||| ||||||||    
T  24885675 aaaatgagtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgta 24885742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 42362247 - 42362323
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||| |||||||||||| |||||||    ||| | ||||| |||||||||||||||||||||||||||||    
T  42362247 caaaggaggtaactttagggttgagggtctttgattagagtt-ctcttgggttgggaaacattgtaaacaccttgggt 42362323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 34139925 - 34139851
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||||||||||||||  |||||||||||||||||||| ||| |||||| ||||    
T  34139925 aaaatgggtagaaattaggg-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatatgtatcccttt 34139851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 33162604 - 33162535
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatc 295  Q
    ||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||||||| ||||||||||    
T  33162604 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatc 33162535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 248 - 300
Target Start/End: Original strand, 36773596 - 36773650
Alignment:
Q  248 ttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  36773596 ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 36773650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 37 - 276
Target Start/End: Original strand, 41586312 - 41586549
Alignment:
Q  37 gagagcttgaagagagaaacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaaca-ttgtaaaca 134  Q
    ||||| || ||||||||||||||||  | || | || |||| ||||||||||||||||||||  | ||| | ||||| |||||| ||||| |||||||||    
T  41586312 gagagtttcaagagagaaacttggtaaatcagatgatgtaactttagggttgagtgtctttggtgagagcttctcttgggttggaaaacagttgtaaaca 41586411  T
Q  135 ccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatggg 234  Q
    ||||||||||| | |||| || |   | || ||||||||| ||  |||  ||  |||||||||| ||| ||||  ||  ||| ||| |||||||||| ||    
T  41586412 ccttgggtagtgagattttactaggaggagaatcaaaaagttttctttaatg--ttttctcttaggatccattctga--gtgagtgacttgaaaaatagg 41586507  T
Q  235 tagaaattatgtcttgttctttgtgagcttttaagctaattt 276  Q
    |||||||||    |||||||||||| |||||||| |||||||    
T  41586508 tagaaattaaagtttgttctttgtgtgcttttaaactaattt 41586549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 1631888 - 1631812
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagct--tttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| |  ||||||||||||||||  || |||||||| ||||||||| |||||||||| ||||    
T  1631888 gaaaaatgggtagaaatta-ggattgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatctcttt 1631812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 168
Target Start/End: Original strand, 9296159 - 9296292
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  ||||| |||||||| |||||||||||| ||    ||||||||||||||||||||  ||   || || |||||||  ||||||||||| |||    
T  9296159 agagcttagagagaaaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagaaagtgtctattgggttgggaaaaacattgtaatcac 9296258  T
Q  136 cttgggtagtta-catttcaccattggaaggatc 168  Q
    |||||||||| |  | ||||||||||||||||||    
T  9296259 cttgggtagtgaggagttcaccattggaaggatc 9296292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 14291828 - 14291719
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| |||||||||||| ||    ||||||||| ||||||||||  ||   ||||| |||||||  ||||||||||| |||    
T  14291828 agagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagcgtctttgtagatagtgtctcttgggttgggaaaaacattgtaatcac 14291729  T
Q  136 cttgggtagt 145  Q
    ||||||||||    
T  14291728 cttgggtagt 14291719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 504
Target Start/End: Original strand, 14699128 - 14699224
Alignment:
Q  411 ttgatttgattatgcttgtggtgatgttttacacttagttttaagactg---tttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    ||| ||||||||||||||||||| || | ||||||||| |||| | |||   |||||||||||||||||||   ||||||||||  |||||||||||    
T  14699128 ttgctttgattatgcttgtggtgttgctctacacttagatttaggtctgctttttgttgttgttgttgcttggagacactttatctattgattacca 14699224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 38312092 - 38312208
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    |||||||||||||||||||||||||||||  || ||||   | |||||||||||| ||||||||||||  |||||| | |   || ||||| ||||||||    
T  38312092 cagattttgaaggagagcttgaagagagagaaatttgggaaatcaaaggaggtaactttagggttgaggttctttg-attagagttctcttgggttggga 38312190  T
Q  122 aacattgtaaacaccttg 139  Q
    ||||||||| ||||||||    
T  38312191 aacattgtatacaccttg 38312208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 724017 - 723941
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||| |||||||||||| |||||||    ||| | || || |||||||||||||||||||||||||||||    
T  724017 caaaggaggtaactttagggttgagggtctttgattagagtt-cttttgggttgggaaacattgtaaacaccttgggt 723941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 228 - 327
Target Start/End: Complemental strand, 25398641 - 25398541
Alignment:
Q  228 aaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggagggctgct 325  Q
    ||||||||||||| || | ||||||||| ||| |||||  |||||| ||| |||||||| | |||||| |||||||||| ||||||||||||| ||||||    
T  25398641 aaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 25398543  T
Q  326 ct 327  Q
    ||    
T  25398542 ct 25398541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 228 - 327
Target Start/End: Complemental strand, 25403779 - 25403679
Alignment:
Q  228 aaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggagggctgct 325  Q
    ||||||||||||| || | ||||||||| ||| |||||  |||||| ||| |||||||| | |||||| |||||||||| ||||||||||||| ||||||    
T  25403779 aaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 25403681  T
Q  326 ct 327  Q
    ||    
T  25403680 ct 25403679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 228 - 327
Target Start/End: Complemental strand, 25407768 - 25407668
Alignment:
Q  228 aaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggagggctgct 325  Q
    ||||||||||||| || | ||||||||| ||| |||||  |||||| ||| |||||||| | |||||| |||||||||| ||||||||||||| ||||||    
T  25407768 aaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 25407670  T
Q  326 ct 327  Q
    ||    
T  25407669 ct 25407668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 34140044 - 34139968
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||| |||||||||||  |||||||    ||| | ||||| |||||||||||||||||||||||||||||    
T  34140044 caaaggaggtaactttagggttgaaagtctttgattagagtt-ctcttgggttgggaaacattgtaaacaccttgggt 34139968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 29867883 - 29867957
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  29867883 aaaatgggtagaaattaggg-ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctcttt 29867957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 45726943 - 45727017
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  ||||||||||||||||||  ||||||||| ||||    
T  45726943 aaaatgggtagaaatta-gagttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctcttt 45727017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 5723570 - 5723453
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    |||||||||||| ||||||||||||||||  |||||||   | ||||||||| || |||||||||  | |||||||    ||| | ||||| ||||||||    
T  5723570 cagattttgaagaagagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttggggtctttgattagagtt-ctcttgggttggga 5723472  T
Q  122 aacattgtaaacaccttgg 140  Q
    |||||||||||||||||||    
T  5723471 aacattgtaaacaccttgg 5723453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 14202638 - 14202604
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||| |||||||||||||||||||||||||||||    
T  14202638 ctcttgggttgggaaacattgtaaacaccttgggt 14202604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 17057525 - 17057449
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| |  ||||||||||  ||||| |  |||||||||| |||||||||||||||||| ||||    
T  17057525 gaaaaatgggtagaaattaggg-ttgttctttgcaagcttgttgaagctaattttttgtaactcatttgtatctcttt 17057449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 17085508 - 17085432
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| |  ||||||||||  ||||| |  |||||||||| |||||||||||||||||| ||||    
T  17085508 gaaaaatgggtagaaattaggg-ttgttctttgcaagcttgttgaagctaattttttgtaactcatttgtatctcttt 17085432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 142
Target Start/End: Original strand, 29867806 - 29867840
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||| |||||||||||||||||||||||||||||    
T  29867806 ctcttgggttgggaaacattgtaaacaccttgggt 29867840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 36318165 - 36318089
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagct--tttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| |  ||||||||||||||||  || || ||||||| ||||||| |||||||||| ||||    
T  36318165 gaaaaatgggtagaaatta-gggttgttctttgtgagcttgttgaaactaatttattgtaacccatttgtatctcttt 36318089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 142
Target Start/End: Original strand, 36773499 - 36773533
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||| |||||||||||||||||||||||||||||    
T  36773499 ctcttgggttgggaaacattgtaaacaccttgggt 36773533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 42288264 - 42288196
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagct--tttaagctaatttcttgtaactcatttgtat 294  Q
    ||||||||||||||||| |  ||||||||||||||||  || |||||||||| ||||||| |||||||||    
T  42288264 aaaatgggtagaaattaagg-ttgttctttgtgagcttgttgaagctaatttattgtaacccatttgtat 42288196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 45099608 - 45099724
Alignment:
Q  26 agattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    |||||||||||| |||||||||||||||  |||||||   | ||||||| | || ||||||||| || |||||||    ||| | ||||| |||||||||    
T  45099608 agattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagtt-ctcttgggttgggaa 45099706  T
Q  123 acattgtaaacaccttgg 140  Q
    ||||||||||||||||||    
T  45099707 acattgtaaacaccttgg 45099724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 45099767 - 45099843
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||| |||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||||| |||||||| ||||    
T  45099767 gaaaaaagggtagaaattaggg-ttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgtatctcttt 45099843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 284
Target Start/End: Original strand, 16388449 - 16388478
Alignment:
Q  255 ttgtgagcttttaagctaatttcttgtaac 284  Q
    ||||||||||||||||||||||||||||||    
T  16388449 ttgtgagcttttaagctaatttcttgtaac 16388478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 327
Target Start/End: Complemental strand, 27139953 - 27139848
Alignment:
Q  222 cttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggc 321  Q
    ||||||| ||| |||||||||| |  |||| ||||||||||||| ||  ||||||| ||||||   ||||||||||| |  || ||||| ||||||| ||    
T  27139953 cttgaaatatgtgtagaaattagggtttgtactttgtgagctttaaatttaatttcctgtaacatttttgtatcactattttcatagtgaattggagagc 27139854  T
Q  322 tgctct 327  Q
    ||||||    
T  27139853 tgctct 27139848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Complemental strand, 4484561 - 4484529
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgg 140  Q
    ||||| |||||||||||||||||||||||||||    
T  4484561 ctcttgggttgggaaacattgtaaacaccttgg 4484529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Complemental strand, 4503363 - 4503331
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgg 140  Q
    ||||| |||||||||||||||||||||||||||    
T  4503363 ctcttgggttgggaaacattgtaaacaccttgg 4503331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 53
Target Start/End: Complemental strand, 6595322 - 6595294
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga 53  Q
    |||||||||||||||||||||||||||||    
T  6595322 cagattttgaaggagagcttgaagagaga 6595294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 142
Target Start/End: Original strand, 11067248 - 11067276
Alignment:
Q  114 ggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||||||||||||||||||||    
T  11067248 ggttgggaaacattgtaaacaccttgggt 11067276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 142
Target Start/End: Complemental strand, 14634051 - 14634023
Alignment:
Q  114 ggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||||||||||||||||||||    
T  14634051 ggttgggaaacattgtaaacaccttgggt 14634023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 292
Target Start/End: Original strand, 17450601 - 17450670
Alignment:
Q  223 ttgaaaaatgggtagaaattatgtcttgttctttgtgagct--tttaagctaatttcttgtaactcatttgt 292  Q
    |||||||||||||||| |||| | |||||||||||||||||  || |||||||||| ||||||| |||||||    
T  17450601 ttgaaaaatgggtagagattagg-cttgttctttgtgagcttgttgaagctaattt-ttgtaacccatttgt 17450670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 142
Target Start/End: Original strand, 24885604 - 24885632
Alignment:
Q  114 ggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||||||||||||||||||||    
T  24885604 ggttgggaaacattgtaaacaccttgggt 24885632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 38312254 - 38312328
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  || ||||||||||||||| |||||||||| ||||    
T  38312254 aaaatgggtagaaattaggg-ttgttctttgtgaacttgttgaaactaatttcttgtaacccatttgtatctcttt 38312328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 243; Significance: 1e-134; HSPs: 96)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 11 - 511
Target Start/End: Complemental strand, 3047617 - 3047115
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggt-ttacaaaggaggtaattttagggttgagtgtctttgtagtgaggta 107  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||  |||||||  ||||||||||||||| |||||||||||||||||||||||||||||     
T  3047617 taagtgtttcagttcagattttgaagaagagctttaagagagagaaacttgggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggtt 3047518  T
Q  108 ctcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcatt 207  Q
    ||||| |||||||||||| | ||| || |||||||||| | |||||| ||||||||||||||||||||||| |||||||  |||| ||||| ||||||||    
T  3047517 ctcttgggttgggaaacactataatcatcttgggtagtgagatttcatcattggaaggatcaaaaagcttccttttgtg--ttttatcttaagattcatt 3047420  T
Q  208 gagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctta 307  Q
    ||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||| |||    
T  3047419 gagagtgtgggtgactt-aaaaatgggtagaaattaggtcttgttctttgtgagcttttaagttgatttcttgtaactcatttgtaccactttcatatta 3047321  T
Q  308 gtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggttaccatcttgtgtgtgtttgttttctttcttgctttcttatc 407  Q
    ||||||||||   | ||||| |       |||| |||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||    
T  3047320 gtggattggataacggctctct-ccccccagagcaggtcatattggaccgaactgggttacgatcttg-gtgtgtttgttttctttcttgctttattatc 3047223  T
Q  408 ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgt----ttgttgttgttgttgcttaaggacactttattcattgattacc 503  Q
    |||||||||||||||||||||||||| || |||||||  |||||||  ||| |    || ||||||||||||||| ||||||||||| |||||||||| |    
T  3047222 ttgttgatttgattatgcttgtggtgttgctttacacacagttttagaactattttgttattgttgttgttgcttgaggacactttactcattgattatc 3047123  T
Q  504 attttctt 511  Q
    | ||||||    
T  3047122 actttctt 3047115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 11 - 501
Target Start/End: Complemental strand, 20284451 - 20283963
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagctt-ga-agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||||| | || |||||||||||||| || || |||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||| |    
T  20284451 taagtgtttctttgcaaattttgaaggagagttttgagagagagaaacttggattataaaggaggtaactttagggttgagtgtctttgtagtgaggttc 20284352  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattg 208  Q
    |||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||||    
T  20284351 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtg--ttttctcttaggattcattg 20284254  T
Q  209 agagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctta 307  Q
    ||||||||||||   ||||||| |||||||||||| | ||||||| ||||| ||||| ||||||||||||||||||| || ||||| |||||||||||||    
T  20284253 agagtgtgggtgatatgaaaaaagggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaacgca-ttgtaacactttcatctta 20284155  T
Q  308 gtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttctta 405  Q
    |||||||||||||||||||| |       ||| ||||||||||||||||||| |||||  || |||||| ||||||||| || ||||||| | |||||||    
T  20284154 gtggattggagggctgctctct--cccccagattaggtcatattggaccgaactgggtcaacaatcttg-gtgtgtttg-ttcctttctttcatttctta 20284059  T
Q  406 tc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgatta 501  Q
    || || ||| ||||||||||||||||||| || | ||||||||| |||| | |||||| ||||||||||| |||   |||||||||| |||||||||    
T  20284058 tctttattgctttgattatgcttgtggtgttgctctacacttagatttaggtctgttt-ttgttgttgtttcttggagacactttatccattgatta 20283963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 25 - 504
Target Start/End: Original strand, 46516056 - 46516537
Alignment:
Q  25 cagattttgaaggagagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaac 124  Q
    ||||||||||||| ||||||  |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |||||  ||||||||||    
T  46516056 cagattttgaaggggagcttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgagttgggaaac 46516155  T
Q  125 attgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattg--agagtgtgggtggc 222  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||   ||||||| ||||     
T  46516156 attgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttcattttgtg--ttttctcttaagattcattggtggagtgtgtgtgg- 46516252  T
Q  223 ttga---aaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggag 318  Q
     |||   ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||    
T  46516253 gtgacacaaaatgggtagaaattatgtcttgttcttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggag 46516352  T
Q  319 ggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatct-tgttgat 415  Q
    ||||||||| |       ||| ||||||||||||||||||| |||||  || |||||| ||||||||| || ||||||| | ||  |||||| | ||| |    
T  46516353 ggctgctctct--cccctagattaggtcatattggaccgaactgggtcaacaatcttg-gtgtgtttg-ttcctttctttcattgtttatctctattgct 46516448  T
Q  416 ttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    |||||||||||| ||||| || ||||||||||| |||||| |||||| |||||||||||| ||   ||||||||||  |||||||||||    
T  46516449 ttgattatgcttttggtgttgctttacacttagatttaagtctgttttttgttgttgttgtttggagacactttatctattgattacca 46516537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 47 - 501
Target Start/End: Original strand, 23402786 - 23403236
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagtt 146  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||     
T  23402786 agagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgggaaacattgtaaacaccttgggtagtg 23402885  T
Q  147 acatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgt 246  Q
    | ||||||||||||||| |||||||||||||| |||||||  |||||||||| ||||||||||||||||| |||   |||||||||||||||||||| |     
T  23402886 agatttcaccattggaatgatcaaaaagcttccttttgtg--ttttctcttaggattcattgagagtgtgagtgatgtgaaaaatgggtagaaattagga 23402983  T
Q  247 cttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggt 345  Q
    ||||||| ||||| ||||| |||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||  |       ||| |||||    
T  23402984 cttgttcttttgtaagcttataagctaatttcttgtaactca-ttgtaacactttcatcttagtagattggagggctgctcact--ccctcagattaggt 23403080  T
Q  346 catattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttat-cttgttgatttgattatgcttgtggtgatgttttac 442  Q
    |||||| |||||||||||||  || |||||  ||||||||| || ||||||| | || |||||  || ||| ||||||||||||||||||| || | |||    
T  23403081 catattagaccgaattgggtcaacaatctt-agtgtgtttg-ttcctttctttcattgcttatatttattgctttgattatgcttgtggtgttgctctac 23403178  T
Q  443 acttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgatta 501  Q
    |||||  |||| | |||||| |||||||||||||||    ||||||||| |||||||||    
T  23403179 acttacatttaggtctgttt-ttgttgttgttgcttggaaacactttatccattgatta 23403236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 12 - 475
Target Start/End: Original strand, 2647433 - 2647894
Alignment:
Q  12 aagtgtttctgttcagattttgaaggagag--cttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtact 109  Q
    |||||||  ||| |||||||||||||||||   ||  ||||||||||||||  |||||||||| ||| ||||||||||||||||||||||||||||  ||    
T  2647433 aagtgttcttgtgcagattttgaaggagagattttagagagagaaacttggactacaaaggagataactttagggttgagtgtctttgtagtgaggatct 2647532  T
Q  110 cttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattga 209  Q
    ||| ||||||||||||| |||| ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||  |||||||||| ||||||||||    
T  2647533 cttgggttgggaaacatggtaagcaccttgggtagtgagatttcaccattggaaggatcaaaaaacttcattttgtg--ttttctcttaggattcattga 2647630  T
Q  210 gagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttag 308  Q
    ||||||||||| |    ||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||| |||||| |||||||||| |||    
T  2647631 gagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatag 2647728  T
Q  309 tggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttat 406  Q
    ||||||||||||||||||| |       ||| ||||||||||||| |||||||||||  || ||||||  |||||||| || ||||||| | || |||||    
T  2647729 tggattggagggctgctctct--cccccagaataggtcatattgggccgaattgggtcaacaatcttg-atgtgtttg-ttcctttctttcattgcttat 2647824  T
Q  407 c-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttg 475  Q
    | || ||| ||||||||||||||||||| || | || |||||| |||| | |||||| ||||||||||||    
T  2647825 ctttattgctttgattatgcttgtggtgttgctctaaacttagatttaggtctgttttttgttgttgttg 2647894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 47 - 445
Target Start/End: Original strand, 5817042 - 5817438
Alignment:
Q  47 agagagaaacttggtt-tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagt 145  Q
    ||||||||||||||   |||||||||||||| |||| |||||||||||||||||||||||| || || ||||||||||||||||||| |||||||| |||    
T  5817042 agagagaaacttgggaatacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctatttggttgggaaacattgtaaataccttggggagt 5817141  T
Q  146 tacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatg 245  Q
     | |||||||||||||||||||||||||||||| ||||||||||||  ||||| ||||||||||||||||| ||| |||||||||||| ||||||||| |    
T  5817142 gagatttcaccattggaaggatcaaaaagcttccttttgtgttttt--tcttaggattcattgagagtgtgagtgacttgaaaaatggatagaaattagg 5817239  T
Q  246 tcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggt 345  Q
    | |||||||||||||||| ||| || ||||||||||||| | |||||||||||||||| |||||||||||||| |||||||| |       |||||||||    
T  5817240 ttttgttctttgtgagctcttatgcaaatttcttgtaacccctttgtatcactttcatattagtggattggagagctgctctct---ccccagagtaggt 5817336  T
Q  346 catattggaccgaattgggtt-accatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgcttgtggtgatgttttac 442  Q
    |||||||||||||| || ||| || |||||  ||||||||| || ||||||| | || |||||| || |||  |||||||||||||||||| |||| |||    
T  5817337 catattggaccgaactgagttaacaatctttggtgtgtttg-ttcctttcttacattgcttatcattattgtgttgattatgcttgtggtgttgttctac 5817435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 13 - 504
Target Start/End: Original strand, 33332187 - 33332676
Alignment:
Q  13 agtgtttctgttcagattttgaaggagagcttgaagaga--gaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactc 110  Q
    ||||||||| | ||||||||||||||||||||  |||||  ||||||||| ||||||||||||||| ||||||||||||||| |||||||| |||| |||    
T  33332187 agtgtttctttgcagattttgaaggagagctttgagagatagaaacttggattacaaaggaggtaactttagggttgagtgtttttgtagtaaggttctc 33332286  T
Q  111 ttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgag 210  Q
    || ||||| ||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||  ||||||  |||||||||| || ||||||||    
T  33332287 ttgggttgagaaacattgtaaacatcttgggtagtgagatttcaccattggaaggatcaaaaagcttccctttgtg--ttttctcttaggaatcattgag 33332384  T
Q  211 agtgtgggtggcttgaaaaatgggtagaaattatgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagt 309  Q
    |||||| || | |  ||||||| |||||||||| ||||||||| ||||| ||||| ||||||||||||||||||||| |||||| |||||||||||||||    
T  33332385 agtgtgcgt-gatacaaaaatgagtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagt 33332483  T
Q  310 ggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc 407  Q
    |||||||||||||||||| |       ||| ||||||||||| || |||| |||||  || |||||| ||||||||| || ||||||| | || ||||||    
T  33332484 ggattggagggctgctctct--cccccagattaggtcatattagatcgaactgggtcaacaatcttg-gtgtgtttg-ttcctttctttcattgcttatc 33332579  T
Q  408 -ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
     || ||||||||||||||||| ||||| || | ||||||||| |||| |  ||||| |||||||||||| ||    |||||||||  |||||||||||    
T  33332580 tttattgatttgattatgcttatggtgttgctctacacttagatttaggtttgttt-ttgttgttgttgtttggatacactttatctattgattacca 33332676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 7 - 504
Target Start/End: Complemental strand, 2580755 - 2580259
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagag--cttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgag 104  Q
    ||||||||||||||| | |||||||||||| ||||   ||  |||||||||||||| || |||||||||||| ||||||||||||||||||||| |||||    
T  2580755 tatttaagtgtttctttgcagattttgaagtagaggttttagagagagaaacttggattgcaaaggaggtaactttagggttgagtgtctttgt-gtgag 2580657  T
Q  105 gtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc 204  Q
    || ||||| |||||| ||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||| |||||||  |||||||||| |||||    
T  2580656 gttctcttgggttggaaaacattgtaaacaccttgggtagtgagatttcaccattgaaaggatcaaaaagcttccttttgtg--ttttctcttaggattc 2580559  T
Q  205 attgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcat 303  Q
    ||||||||||||||||   ||||||||||||||||| || | ||||||||| ||| |||||  |||||| |||||||||||||| ||||| |||||||||    
T  2580558 attgagagtgtgggtgatatgaaaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctattttcttgtaactca-ttgtaacactttcat 2580460  T
Q  304 cttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgt---tttctttcttgct 399  Q
    ||||||||||||||| |||||||| |       ||| |||||||||||||||||||||||||  || |||||| ||||||||||   | ||||| ||  |    
T  2580459 cttagtggattggagagctgctctct--cccccagactaggtcatattggaccgaattgggtcaacaatcttg-gtgtgtttgttcctctcttttttcat 2580363  T
Q  400 ttcttatc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattga 498  Q
    | |||||| || ||| |||| |||| |||||||||    | ||||||||| |||| | |||||  ||||||||||||||| | |||||||||  ||||||    
T  2580362 tgcttatctttattgctttggttatacttgtggtgtatctctacacttagatttaggtctgtt--ttgttgttgttgcttgaagacactttacacattga 2580265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 11 - 504
Target Start/End: Original strand, 4796404 - 4796896
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaag--agagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    |||||||| ||||  ||||||||||| |||||||| ||  |||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||  |    
T  4796404 taagtgttcctgtgtagattttgaagaagagcttggagtgagagaaacttggattacaaaggaggtaactttagg-ttgagtgtctttgtagtgaggatc 4796502  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattg 208  Q
    |||| |||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||||    
T  4796503 tcttgggttggaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttctttttgtg--ttttctcttaggattcattg 4796600  T
Q  209 agagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctta 307  Q
    ||| ||| |||| |    |||||||||| |||| | ||||||||||| ||| ||||| ||||||||||||||||||||| |||||| || ||||||| ||    
T  4796601 agaatgtaggtgac--acaaaatgggtataaatgaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacaatttcatcata 4796698  T
Q  308 gtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggtt-accatcttgtgtgtgtttgttttctttct-tgctttctta 405  Q
    ||||||| ||||||||  ||||       ||| |||||||| |||||||||| |||||| || |||||| ||||||||| || |||||| |  || ||||    
T  4796699 gtggatttgagggctg--ctttctcccccagattaggtcattttggaccgaactgggttaacaatcttg-gtgtgtttg-ttcctttctctcattgctta 4796794  T
Q  406 tc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactg--tttgttgttgttgttgcttaaggacactttattcattgattac 502  Q
    || || ||| ||||||||||||||||||| || | ||||||||| |||| | |||  ||| |||||||||||||||   || |||||||  |||||||||    
T  4796795 tctttattgctttgattatgcttgtggtgttgctctacacttagatttaggtctgttttttttgttgttgttgcttggagaaactttatctattgattac 4796894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 37 - 504
Target Start/End: Complemental strand, 29160142 - 29159674
Alignment:
Q  37 gagagcttgaagagagaaacttggtt-tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaac 133  Q
    ||||||||  ||||||||||||||   |||||||||||||| ||| ||||||||||||||| ||||||||| |||||   ||||||||||||||||||||    
T  29160142 gagagctttgagagagaaacttgggaatacaaaggaggtaacttttgggttgagtgtctttatagtgaggttctcttgagggttgggaaacattgtaaac 29160043  T
Q  134 accttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--attgagagtgtgggtggcttgaaaaat 231  Q
    |||||||||||| | |||||| ||||||||||||||||||||||| |||||||  |||||||||| |||||  |||| ||| ||||||| |   ||||||    
T  29160042 accttgggtagtgagatttcaacattggaaggatcaaaaagcttccttttgtg--ttttctcttaggattcatattgtgagagtgggtgac-acaaaaat 29159946  T
Q  232 gggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttn 330  Q
    |||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||||||| |||||||| |     
T  29159945 gggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctct- 29159847  T
Q  331 nnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgctt 427  Q
          ||| ||||||||||||||||||| |||||  || |||||| ||||||||| || || |||| | || |||||| || ||| |||||||||||||    
T  29159846 -cccctagattaggtcatattggaccgaactgggtcaacaatcttg-gtgtgtttg-ttcctctctttcattgcttatctttattgctttgattatgctt 29159750  T
Q  428 gtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    |||||| || | ||||||||| |||| | |||||| |||||||||||||||   ||||||||||  |||||||||||    
T  29159749 gtggtgttgctctacacttagatttaggtctgttt-ttgttgttgttgcttggagacactttatctattgattacca 29159674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 47 - 504
Target Start/End: Original strand, 9189779 - 9190233
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgt-ctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagt 145  Q
    |||||||||||||| || |||||||| ||| ||||||||||||||| ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||    
T  9189779 agagagaaacttggattgcaaaggagataactttagggttgagtgttctttgtagtaaggttctcttgggttgggaaacattgtaaacaccttgggtagt 9189878  T
Q  146 tacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatg 245  Q
     | ||||||||||||||||||||||||||||||   |||||| |||||||||| |||||||| ||||||||||||   |||||||||||||||||||| |    
T  9189879 gagatttcaccattggaaggatcaaaaagcttc--cttgtgtgttttctcttaggattcattaagagtgtgggtgatatgaaaaatgggtagaaattagg 9189976  T
Q  246 tcttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtag 343  Q
     ||||||||| ||| |||||  ||||||  |||||||||||||| ||||| |||||||||||||||||||||||| |||||||| |       ||| |||    
T  9189977 acttgttcttgtgtaagcttgcaagctatttttcttgtaactca-ttgtaacactttcatcttagtggattggagagctgctctct--cccccagactag 9190073  T
Q  344 gtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgcttgtggtgatgtttt 440  Q
    |||||||||||||||| |||||  || |||||| ||||||||| || || |||| | || |||||| || ||| |||| |||||||||||||| || | |    
T  9190074 gtcatattggaccgaactgggtcaacaatcttg-gtgtgtttg-ttcctctctttcattgcttatctttattgctttgtttatgcttgtggtgttgctct 9190171  T
Q  441 acacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    |||||||| | || |  ||||  |||||||||||||||   |||||||||  ||||||||||||    
T  9190172 acacttagatctaggtttgtt--ttgttgttgttgcttggagacactttacacattgattacca 9190233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 47 - 255
Target Start/End: Original strand, 9184947 - 9185153
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagtt 146  Q
    |||||||||| | | || |||||||||||| ||||||||||||| |||||||||| |||| ||||| ||||||||||||||||||||||||||||||||     
T  9184947 agagagaaacattgattgcaaaggaggtaactttagggttgagtatctttgtagtaaggttctcttgggttgggaaacattgtaaacaccttgggtagtg 9185046  T
Q  147 acatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgt 246  Q
    | ||||||||||||||||||||||||||||||   |||||| |||||||||| |||||||| ||||||||||||   |||||||||||||||||||| |     
T  9185047 agatttcaccattggaaggatcaaaaagcttc--cttgtgtgttttctcttaggattcattaagagtgtgggtgatatgaaaaatgggtagaaattagga 9185144  T
Q  247 cttgttctt 255  Q
    |||||||||    
T  9185145 cttgttctt 9185153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 125 - 327
Target Start/End: Complemental strand, 56195 - 55993
Alignment:
Q  125 attgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcatt---gagagtgtgggtgg 221  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||  |||||| ||||||||   |||||||||||||     
T  56195 attgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttctttttgtgtttt--ctcttaggattcattattgagagtgtgggtga 56098  T
Q  222 cttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggg 320  Q
    |    ||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  56097 cac--aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggaggg 56000  T
Q  321 ctgctct 327  Q
    |||||||    
T  55999 ctgctct 55993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 114 - 504
Target Start/End: Complemental strand, 49091920 - 49091533
Alignment:
Q  114 ggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcatt---gag 210  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||||   |||    
T  49091920 ggttgggaaacattgaaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtg--ttttctcttaggattcattatggag 49091823  T
Q  211 agtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagt 309  Q
    |||||||||| |    | ||||||||||||||| ||||||||||| ||| ||||| |||| |||||||||||||||| |||||| |||||||||| ||||    
T  49091822 agtgtgggtgac--acagaatgggtagaaattaggtcttgttcttgtgtaagcttataaggtaatttcttgtaactcttttgtaacactttcatcatagt 49091725  T
Q  310 ggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc 407  Q
    ||||||||| | |||||| |       ||| |||||||||||||||  || |||||  || |||||| ||| ||||| || ||||||| | || ||||||    
T  49091724 ggattggagagttgctctct--tccccagattaggtcatattggactaaactgggtcaacaatcttg-gtgcgtttg-ttcctttctttcattgcttatc 49091629  T
Q  408 ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    ||  || ||||||||||||||||||| || | ||||||||  | || | |||||| |||||||||||||||   ||||||||||  |||||||||||    
T  49091628 tttgtgctttgattatgcttgtggtgttgctctacacttaaatctaggtctgttt-ttgttgttgttgcttggagacactttatctattgattacca 49091533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 90 - 289
Target Start/End: Original strand, 9235398 - 9235596
Alignment:
Q  90 tgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttt 189  Q
    |||||| |||||||| | ||||| ||||||||||||||||||||||||||| |||| | |||||||||||| ||||||||||||||||| |||||||  |    
T  9235398 tgtcttcgtagtgagattctcttgggttgggaaacattgtaaacaccttggatagtgatatttcaccattgcaaggatcaaaaagcttccttttgtg--t 9235495  T
Q  190 tttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcat 288  Q
    ||||||||| ||||| ||||||||| |||||   |||||||||||||||||||| | ||||||| ||||| ||||| |||||||||||||||||||||||    
T  9235496 tttctcttaggattcgttgagagtgcgggtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcat 9235595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 114 - 327
Target Start/End: Complemental strand, 35961074 - 35960862
Alignment:
Q  114 ggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcat-tgagag 212  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||| ||||| |  |||||||||| ||||||| |  |||    
T  35961074 ggttgggaaacattgtaaacaccttaggtagtgagatttcaccattggaaggatcaaaaagcttccttttgcg--ttttctcttaagattcatctttgag 35960977  T
Q  213 tgtgggtggcttgaaaaatgggtagaaattatgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtgg 311  Q
    ||||||||   || ||||||||||||||||| || |||||| ||||| ||||| |||||||||||||| ||||||||||||| |||||||||| ||||||    
T  35960976 tgtgggtgatatg-aaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttctaactcatttgtaacactttcatcatagtgg 35960878  T
Q  312 attggagggctgctct 327  Q
     |||||||||||||||    
T  35960877 tttggagggctgctct 35960862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 11 - 327
Target Start/End: Complemental strand, 2479698 - 2479382
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||||||||| || ||||||||||||||||  ||||||| |||||||||||| || ||||||||||||||||||| ||||||||  |    
T  2479698 taagtgttcttgtgcagattttggagaagagcttgaagagagagaaacttggattacaaaggagggaactttagggttgagtgtctttatagtgaggatc 2479599  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---a 205  Q
    |||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| |||| | | || ||| ||| | |||   |    
T  2479598 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttatatcttctct-ttagggttcatta 2479501  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
    ||||||| |||||   |   | | |||||||||||||| ||||||||||| ||| |||||  |||||| |||||| |||||| |||||| ||||||||||    
T  2479500 ttgagagagtgggaaac---acacatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttataactc-tttgtaacactttcatc 2479405  T
Q  305 ttagtggattggagggctgctct 327  Q
     ||||||||| ||| ||||||||    
T  2479404 atagtggatttgagagctgctct 2479382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 21989270 - 21989110
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaag--agagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||||||||||||||||||||||||  |||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||  |    
T  21989270 taagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaacttggattacaaaggaggtaactttaggtttgagtgtctttgtagtgaggatc 21989171  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatca 169  Q
    |||| |||||||||||||||||||||||||||||||| | |||| ||||||||||||||||    
T  21989170 tcttgggttgggaaacattgtaaacaccttgggtagtgagattttaccattggaaggatca 21989110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 223 - 504
Target Start/End: Original strand, 28617172 - 28617454
Alignment:
Q  223 ttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggct 322  Q
    ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||| |||    
T  28617172 ttgaaaaataggtagaaattaggttttgttctttgtgagcttttaagctaatttcttgtaaccccattgtatcactttcatcttagtggattggagagct 28617271  T
Q  323 gctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgctttcttatc-ttgttgatttgat 420  Q
    ||||| |       ||||||||||||||||||||||| |||||  || || ||| |||||||||||||||| ||| ||| |||||| |||||| |||||     
T  28617272 gctctct--cccccagagtaggtcatattggaccgaactgggtaaacaatattg-gtgtgtttgttttcttcctttcttgcttatctttgttgctttgaa 28617368  T
Q  421 tatgcttgtggtgatg-ttttacacttagttttaagact-gtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    ||||||||||||| || |||||| || ||  ||| | ||  ||||||||| ||||| ||| |||  |||||| |||||||||||||    
T  28617369 tatgcttgtggtgttgcttttactctaagacttaggtctattttgttgttcttgtttcttgaggctactttactcattgattacca 28617454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 47 - 187
Target Start/End: Complemental strand, 47263990 - 47263851
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagtt 146  Q
    |||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||   ||||| ||||||||||||||||||| ||||||||||||     
T  47263990 agagagaaacttggattataaaggaggtaactttagggttgagtgtctttgtagtgagaatctcttcggttgggaaacattgtaaataccttgggtagtg 47263891  T
Q  147 acatttcaccattggaaggatcaaaaagcttcattttgtgt 187  Q
    | |||||||||||||||||||| ||||||||| ||||||||    
T  47263890 agatttcaccattggaaggatc-aaaagcttccttttgtgt 47263851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 47 - 164
Target Start/End: Original strand, 44847898 - 44848015
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagtt 146  Q
    |||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||     
T  44847898 agagagaaacttggattataaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttggatagtg 44847997  T
Q  147 acatttcaccattggaag 164  Q
    | ||||||||||||||||    
T  44847998 agatttcaccattggaag 44848015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 11 - 142
Target Start/End: Complemental strand, 49092051 - 49091918
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| |||||||||||||||||||||||||||||  ||||||| ||||||||||||||| |||| ||||||||||||||||| |||||       
T  49092051 taagtgttcttgtgcagattttgaaggagagcttgaagagagagaaacttggattacaaaggaggtaactttaaggttgagtgtctttgtactgaggata 49091952  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||| ||||||||||||||| |||||||||||||    
T  49091951 tcttgggttgggaaacattgaaaacaccttgggt 49091918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 38 - 168
Target Start/End: Complemental strand, 18413975 - 18413843
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| |||||||||||| || | ||||||||||||||||||||||||||  ||||| |||||||  ||||| |||||||||    
T  18413975 agagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacaatgtaaacac 18413876  T
Q  136 cttgggtagttacatttcaccattggaaggatc 168  Q
    |||||||||| | ||||||||||||||||||||    
T  18413875 cttgggtagtgagatttcaccattggaaggatc 18413843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 38 - 168
Target Start/End: Complemental strand, 21640145 - 21640013
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| |||||||||||| || | ||||||||||||||||||||| ||||  ||||| |||||||  |||||||||||||||    
T  21640145 agagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaacac 21640046  T
Q  136 cttgggtagttacatttcaccattggaaggatc 168  Q
    |||||||||| | ||||||||||||||||||||    
T  21640045 cttgggtagtgagatttcaccattggaaggatc 21640013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 38 - 168
Target Start/End: Complemental strand, 21646343 - 21646211
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||| | |||||||||||| || | ||||||||||||||||||||| ||||  ||||| |||||||  |||||||||||||||    
T  21646343 agagcttagagagagaaacttagattacaaaggaggaaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaacac 21646244  T
Q  136 cttgggtagttacatttcaccattggaaggatc 168  Q
    |||||||||| | ||||||||||||||||||||    
T  21646243 cttgggtagtgagatttcaccattggaaggatc 21646211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 118 - 327
Target Start/End: Complemental strand, 21983539 - 21983330
Alignment:
Q  118 gggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--attgagagtgt 215  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||| | ||||||| ||||||||||| ||| ||| | |||  |||  ||| ||    
T  21983539 gggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-ataagcttccttttgtgttttctct-ttagggttcatattttgagagt 21983442  T
Q  216 gggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactc-atttgtatcactttcatcttagtggat 313  Q
    ||||| |    |||||||||||||| || ||||||||||| ||| |||||  |||||| |||||||||||||  |||||| |||||||||| ||||||||    
T  21983441 gggtgac--acaaaatgggtagaaactaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactctttttgtaacactttcatcatagtggat 21983344  T
Q  314 tggagggctgctct 327  Q
    ||||| ||||||||    
T  21983343 tggagagctgctct 21983330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 38 - 168
Target Start/End: Complemental strand, 18409099 - 18408967
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||| | |||||||||||| || | ||||||||||||||||||||||||||  ||||| |||||||  |||||||||||||||    
T  18409099 agagcttagagagagaaacttagattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacac 18409000  T
Q  136 cttgggtagttacatttcaccattggaaggatc 168  Q
    |||||||||| | |||||||||||  |||||||    
T  18408999 cttgggtagtgagatttcaccattaaaaggatc 18408967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 79736 - 79654
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgagg 105  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||||||||||| |||| | |||||||||||||||||||||    
T  79736 cagattttgaaggagagcttgaagagagagaaacttggattacaaaggaggtaactttaagattgagtgtctttgtagtgagg 79654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 168
Target Start/End: Original strand, 1533201 - 1533334
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| |||||||||||| ||    |||||||||||||||||||| |||   ||||| |||||||  ||||||||||| |||    
T  1533201 agagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcac 1533300  T
Q  136 cttgggtagtta-catttcaccattggaaggatc 168  Q
    |||||||||| |  | ||||||||||||||||||    
T  1533301 cttgggtagtgaggagttcaccattggaaggatc 1533334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 43864097 - 43864215
Alignment:
Q  26 agattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    ||||||||||| | ||||||||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | | | || ||||| |||||||||    
T  43864097 agattttgaagaatagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg-attaaagttctcttgggttgggaa 43864195  T
Q  123 acattgtaaacaccttgggt 142  Q
    ||||||||||||||||||||    
T  43864196 acattgtaaacaccttgggt 43864215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 327
Target Start/End: Original strand, 44848636 - 44848735
Alignment:
Q  228 aaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctc 326  Q
    |||||||||||||||| ||||| ||||| ||| |||||  |||||  ||||||||||||| |||||| |||||||||| ||||||||||||| |||||||    
T  44848636 aaatgggtagaaattaggtcttattcttgtgtaagcttgcaagcttttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 44848734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 11 - 142
Target Start/End: Original strand, 1113495 - 1113628
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggta 107  Q
    ||||||||||||| |||||||||||| |||| |||||||||||  |||||||   | ||||||| |||| |||||||||||| ||||||| | |   ||     
T  1113495 taagtgtttctgtgcagattttgaagaagaggttgaagagagagaaacttgggaaatcaaaggaagtaactttagggttgagggtctttg-attagagtt 1113593  T
Q  108 ctcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||| ||||||||||||||||||||| |||||||    
T  1113594 ctcttgggttgggaaacattgtaaacaacttgggt 1113628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 24526051 - 24525985
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttg 291  Q
    ||||||||||||||||| || ||||||||||||||||| |  |||||||||||||||||||||||||    
T  24526051 aaaatgggtagaaattaggttttgttctttgtgagcttgtcaaagctaatttcttgtaactcatttg 24525985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 48489265 - 48489402
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaag--agagaaacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtga 103  Q
    ||||||||||||  ||| |||||||||||| |||| ||||||  ||||||||||||   | |||||||||||| |||||||||||  ||||||| | |      
T  48489265 tatttaagtgttcttgtgcagattttgaagaagagattgaagatagagaaacttgggaaatcaaaggaggtaactttagggttgatggtctttg-attag 48489363  T
Q  104 ggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
     || ||||| |||||||||||||||||||||||||||||    
T  48489364 agttctcttgggttgggaaacattgtaaacaccttgggt 48489402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 48491413 - 48491550
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtga 103  Q
    ||||||||||||  ||| |||||||||||| |||| |||||||||||  |||||| |  | |||||||||||| |||||||||||| ||||||| | |      
T  48491413 tatttaagtgttcttgtgcagattttgaagaagaggttgaagagagagaaacttgataaatcaaaggaggtaactttagggttgagggtctttg-attag 48491511  T
Q  104 ggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
     || ||||| |||||||||||||||||||||| ||||||    
T  48491512 agttctcttgggttgggaaacattgtaaacactttgggt 48491550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 300
Target Start/End: Complemental strand, 23565217 - 23565141
Alignment:
Q  226 aaaaatgggtagaaattatgtcttgttctttgtgagct--tttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||| ||||||||||| |||||||||||||||||||  || || ||||||||||||||||| |||||||| ||||    
T  23565217 aaaaataggtagaaattaggtcttgttctttgtgagcttgttgaaactaatttcttgtaactcttttgtatctcttt 23565141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 24526170 - 24526094
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||| ||| |||||||||||| ||||||| | |  ||| |||||||||||||||||||||||||||||||||||    
T  24526170 caaaggagataactttagggttgagggtctttg-attatggttctcttaggttgggaaacattgtaaacaccttgggt 24526094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 2361126 - 2361052
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  2361126 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 2361052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 29608751 - 29608825
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  29608751 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 29608825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 38671376 - 38671302
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||||||||||||||  |||||||||||| ||||||| |||||||||||||||    
T  38671376 aaaatgggtagaaattaggg-ttgttctttgtgagcttgtttaagctaatttattgtaacacatttgtatcacttt 38671302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 41649166 - 41649091
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctt-ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||| ||||||||||| || ||||||||||||||||| || ||||||||||||||||| |||||||||| ||||    
T  41649166 gaaaaattggtagaaattaggt-ttgttctttgtgagcttgtttagctaatttcttgtaacccatttgtatcccttt 41649091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 48599488 - 48599414
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  48599488 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 48599414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 2390294 - 2390370
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  2390294 gaaaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 2390370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 6570430 - 6570561
Alignment:
Q  9 tttaagtgtttctgttcagattttgaaggagagcttgaagagag--aaacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgagg 105  Q
    ||||||||||||| | || ||||||||||||||||| ||||| |  |||||||    | |||||||||||| |||||| ||||||||||||| | |  ||    
T  6570430 tttaagtgtttctttgcatattttgaaggagagcttaaagaggggaaaacttgagaaatcaaaggaggtaactttaggattgagtgtctttg-actaggg 6570528  T
Q  106 tactcttaggttgggaaacattgtaaacacctt 138  Q
    | ||||| || ||||||||||||||||||||||    
T  6570529 ttctcttggggtgggaaacattgtaaacacctt 6570561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 18126496 - 18126615
Alignment:
Q  25 cagattttgaaggagagcttgaa--gagagaaacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    |||||||||||| ||||||||||  |||||||||||||   | |||||||||||| |||||||||||| ||||||| | |   || ||| | ||||||||    
T  18126496 cagattttgaagaagagcttgaatagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg-attagagttctcatgggttggga 18126594  T
Q  122 aacattgtaaacaccttgggt 142  Q
    ||||||||||||| |||||||    
T  18126595 aacattgtaaacaacttgggt 18126615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 30025048 - 30024929
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||| |||||||||||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | |   || |||||||||||  |    
T  30025048 cagattttgaatgagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg-attagagttctcttaggttgaaa 30024950  T
Q  122 aacattgtaaacaccttgggt 142  Q
    ||| |||||||||||||||||    
T  30024949 aacgttgtaaacaccttgggt 30024929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 38671495 - 38671419
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||| |||||||||||| |||||||    ||| | ||||| |||||||||||||||||||||||||||||    
T  38671495 caaaggaggtaactttagggttgagggtctttgattagagtt-ctcttgggttgggaaacattgtaaacaccttgggt 38671419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 47676452 - 47676333
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||  |||||||||||||||  |||||||   | |||||||| ||| |||||||||||| |||||||    ||| | ||||| ||||||||    
T  47676452 cagattttgaagaggagcttgaagagagagaaacttgggaaatcaaaggagataactttagggttgagggtctttgattagagtt-ctcttgggttggga 47676354  T
Q  122 aacattgtaaacaccttgggt 142  Q
    |||||||||||||||||||||    
T  47676353 aacattgtaaacaccttgggt 47676333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 3259009 - 3259083
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||||||||||| || |  |||||||||||||||||  |||||||||||| |||||||||||||||||| ||||    
T  3259009 aaaatgggtagaaactaggg-ttgttctttgtgagcttgtttaagctaatttattgtaactcatttgtatctcttt 3259083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 6431985 - 6432059
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  6431985 aaaatgggtagaaattagga-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 6432059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 22269987 - 22270061
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  22269987 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 22270061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 25615867 - 25615937
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatca 296  Q
    ||||||||||||||||| || ||||||| |||| ||||  |||||||||||||||||||| |||||||||||    
T  25615867 aaaatgggtagaaattaggt-ttgttctatgtgcgcttgtttaagctaatttcttgtaacccatttgtatca 25615937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 31518809 - 31518883
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||| ||||||||||| || ||||||||||||||||| |  |||||| |||||||||||||||||||||| ||||    
T  31518809 aaaataggtagaaattaggt-ttgttctttgtgagcttattgaagctagtttcttgtaactcatttgtatctcttt 31518883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 31733123 - 31733049
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||||||||||||||  | |||||||||||||||||| |||||||||| ||||    
T  31733123 aaaatgggtagaaattaggg-ttgttctttgtgagcttggtgaagctaatttcttgtaacccatttgtatctcttt 31733049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 19502030 - 19502147
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    |||||||||||||||||||| ||||||||  ||||||    | |||| ||||||| |||||||||||| |||||||    ||| | ||||| ||||||||    
T  19502030 cagattttgaaggagagcttaaagagagacaaacttgagaaatcaaatgaggtaactttagggttgagggtctttgattagagtt-ctcttgggttggga 19502128  T
Q  122 aacattgtaaacaccttgg 140  Q
    |||||||||||||||||||    
T  19502129 aacattgtaaacaccttgg 19502147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 23554892 - 23555009
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    |||||||||||||||||||||||||||||  |||||||   | |||||||||||| || ||||||||  ||||||| | |   || |||||  |||||||    
T  23554892 cagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaacttcagggttgaaggtctttg-attagagttctcttgagttggga 23554990  T
Q  122 aacattgtaaacaccttgg 140  Q
    |||||||||||||||||||    
T  23554991 aacattgtaaacaccttgg 23555009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 145
Target Start/End: Complemental strand, 2058292 - 2058199
Alignment:
Q  54 aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacaccttgggtagt 145  Q
    ||||||| |||||||||||| ||    |||||||||||||||||||| |||   ||||| |||||||  ||||||||||| |||||||||||||    
T  2058292 aacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt 2058199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 504
Target Start/End: Original strand, 9235693 - 9235783
Alignment:
Q  415 tttgattatgcttgtggtgatgttttacacttagttttaagactgtttgtt-gttgttgttgcttaaggacactttattcattgattacca 504  Q
    ||||||||||||||||||| || | |||| |||| |||| | |||||| || |||||||||||||   |||||||||| ||||||||||||    
T  9235693 tttgattatgcttgtggtgttgctctacatttagatttaggtctgtttttttgttgttgttgcttggagacactttatccattgattacca 9235783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 2761618 - 2761499
Alignment:
Q  25 cagattttgaaggagagcttgaagagag--aaacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||||||||||||||||||  ||||||||   | |||||||||||| |||||||||||   | |||| | |   || ||||| ||||||||    
T  2761618 cagattttgaaggagagcttgaagagagataaacttgggaaatcaaaggaggtaactttagggttgatgatatttg-attagagttctcttgggttggga 2761520  T
Q  122 aacattgtaaacaccttgggt 142  Q
    |||||||||||||| ||||||    
T  2761519 aacattgtaaacacattgggt 2761499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 4586013 - 4586132
Alignment:
Q  25 cagattttgaaggagagcttgaagagagaaa--cttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||||||| | |||||||||||  |||||   | ||||||| |||| ||||||||||||  ||||||    ||| | ||||| ||||||||    
T  4586013 cagattttgaaggagagttagaagagagaaaaacttgggaaatcaaaggatgtaactttagggttgaggctctttgattagagtt-ctcttgggttggga 4586111  T
Q  122 aacattgtaaacaccttgggt 142  Q
    |||||||||||||||||||||    
T  4586112 aacattgtaaacaccttgggt 4586132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 4508860 - 4508786
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||| |||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  4508860 aaaatgagtagaaattaggg-ttgttctttgtgagcttattgaagctaatttcttgtaacccatttgtatctcttt 4508786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 4510702 - 4510628
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||||||||||| || |  |||||||||||||||||| |||||||||| ||||    
T  4510702 aaaatgggtagaaattaagg-ttgttctttgtgagtttattgaagctaatttcttgtaacccatttgtatctcttt 4510628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 4512544 - 4512470
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||||||||||| || |  |||||||||||||||||| |||||||||| ||||    
T  4512544 aaaatgggtagaaattaagg-ttgttctttgtgagtttattgaagctaatttcttgtaacccatttgtatctcttt 4512470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 8153356 - 8153430
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||| |||||||||| |  |||||||||||||| || |  ||||||||||||||||||||||||||||| ||||    
T  8153356 aaaatgagtagaaattaggg-ttgttctttgtgagattgtcaaagctaatttcttgtaactcatttgtatctcttt 8153430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 26417330 - 26417404
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  ||| |||||||||||||| |||||||||| ||||    
T  26417330 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagataatttcttgtaacccatttgtatctcttt 26417404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 27347831 - 27347905
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  27347831 aaaatgggtagaaattagga-ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt 27347905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 30024886 - 30024812
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||| |||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  30024886 aaaatgggtagaaattaggg-ttgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 30024812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 47674097 - 47674023
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  47674097 aaaatgggtagaaattaggg-ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt 47674023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 48491593 - 48491667
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  48491593 aaaatgggtagaaattaggg-ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt 48491667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 761325 - 761263
Alignment:
Q  222 cttgaaaaatgggtagaaatta-tgtcttgttctttgtgagcttttaagctaatttcttgtaac 284  Q
    |||||||||||||||||||||| ||| || |||||||||||||||| |||| |||| |||||||    
T  761325 cttgaaaaatgggtagaaattagtgtttt-ttctttgtgagcttttgagctcatttattgtaac 761263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 22328525 - 22328471
Alignment:
Q  248 ttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||||||||||||||||| |||||||| ||||    
T  22328525 ttgttctttgtgagcttgttgaagctaatttcttgtaactcttttgtatctcttt 22328471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 24515076 - 24514959
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||| |||||||||||||||  |||||||   | ||||||| | || ||||||||| || |||||||    ||| | ||||| ||||||||    
T  24515076 cagattttgaaggggagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagtt-ctcttgggttggga 24514978  T
Q  122 aacattgtaaacaccttgg 140  Q
    |||||||||||||||||||    
T  24514977 aacattgtaaacaccttgg 24514959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 31105547 - 31105478
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatc 295  Q
    |||||||||||||||||  | || |||||||||||||| |  |||||||||||||||||| ||||||||||    
T  31105547 aaaatgggtagaaattagatttt-ttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatc 31105478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 143
Target Start/End: Complemental strand, 41649241 - 41649206
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggta 143  Q
    ||||| ||||||||||||||||||||||||||||||    
T  41649241 ctcttgggttgggaaacattgtaaacaccttgggta 41649206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 18126656 - 18126732
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||||| |||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  18126656 gaaaaatgtgtagaaattaggg-ttgttctttgtgaacttgttcaagctaatttcttgtaacccatttgtatctcttt 18126732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 142
Target Start/End: Original strand, 27347754 - 27347788
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||||||||||||||||||| ||||||    
T  27347754 ctcttaggttgggaaacattgtaaacacattgggt 27347788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 31733200 - 31733166
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||| |||||||||||||||||||||||||||||    
T  31733200 ctcttgggttgggaaacattgtaaacaccttgggt 31733166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 5514168 - 5514127
Alignment:
Q  223 ttgaaaaatgggtagaaattatgtcttgttctttgtgagctt 264  Q
    |||||||| | ||||||||||||| |||||||||||||||||    
T  5514168 ttgaaaaaagagtagaaattatgttttgttctttgtgagctt 5514127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 18413737 - 18413685
Alignment:
Q  274 tttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||| ||||||||    
T  18413737 tttcttgtaac-cctttgtaacactttcatcatagtggattggagagctgctct 18413685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 327
Target Start/End: Complemental strand, 21639954 - 21639854
Alignment:
Q  228 aaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggagggctgct 325  Q
    ||||||||||||  || ||||||||||| ||| |||||  |||||| ||| |||||||| | |||||| |||||||||  ||||||||||||| ||||||    
T  21639954 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcattatagtggattggagagctgct 21639856  T
Q  326 ct 327  Q
    ||    
T  21639855 ct 21639854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 327
Target Start/End: Complemental strand, 21646152 - 21646052
Alignment:
Q  228 aaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggagggctgct 325  Q
    ||||||||||||  || ||||||||||| ||| |||||  |||||| ||| |||||||| | ||| || |||||||||| ||||||||||||| ||||||    
T  21646152 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccctttt-taacactttcatcatagtggattggagagctgct 21646054  T
Q  326 ct 327  Q
    ||    
T  21646053 ct 21646052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 21983578 - 21983541
Alignment:
Q  48 gagagaaacttggtttacaaaggaggtaattttagggt 85  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  21983578 gagagaaacttggattacaaaggaggtaactttagggt 21983541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 496137 - 496063
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  | ||||||||||||||| |  |||||||||||||| ||| |||||||||| ||||    
T  496137 aaaatgggtagaaattaggg-tagttctttgtgagcttgttgaagctaatttcttgcaacccatttgtatctcttt 496063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 1113671 - 1113745
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||| ||||||||| |  ||||||||||||||||| |  ||||||||||||| |||| |||||||||| ||||    
T  1113671 aaaatggatagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttataacccatttgtatctcttt 1113745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Original strand, 4178712 - 4178744
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgg 140  Q
    ||||| |||||||||||||||||||||||||||    
T  4178712 ctcttgggttgggaaacattgtaaacaccttgg 4178744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 12098096 - 12098056
Alignment:
Q  102 gaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||| ||||| ||||||||||||||||||||| |||||||    
T  12098096 gaggttctcttgggttgggaaacattgtaaacatcttgggt 12098056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 14069987 - 14069913
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||| |||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  14069987 aaaaagggtagaaattaggg-ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctcttt 14069913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 14380015 - 14379941
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||| |||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  14380015 aaaaagggtagaaattaggg-ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctcttt 14379941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Original strand, 29990992 - 29991024
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgg 140  Q
    ||||| |||||||||||||||||||||||||||    
T  29990992 ctcttgggttgggaaacattgtaaacaccttgg 29991024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Original strand, 35853852 - 35853884
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgg 140  Q
    ||||| |||||||||||||||||||||||||||    
T  35853852 ctcttgggttgggaaacattgtaaacaccttgg 35853884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Original strand, 39731314 - 39731346
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgg 140  Q
    ||||| |||||||||||||||||||||||||||    
T  39731314 ctcttgggttgggaaacattgtaaacaccttgg 39731346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 40808485 - 40808517
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttg 97  Q
    |||||||||||| ||||||||||||||||||||    
T  40808485 caaaggaggtaactttagggttgagtgtctttg 40808517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 41317588 - 41317514
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||| ||||||||||| |  ||||||||||||||||| |  |||||||||||||||||  |||||||||| ||||    
T  41317588 aaaattggtagaaattaggg-ttgttctttgtgagcttgtcaaagctaatttcttgtaatccatttgtatcccttt 41317514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Complemental strand, 41317665 - 41317633
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgg 140  Q
    ||||| |||||||||||||||||||||||||||    
T  41317665 ctcttgggttgggaaacattgtaaacaccttgg 41317633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 47676290 - 47676216
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||||||||||  || |  |||||||||||||||||| |||||||||| ||||    
T  47676290 aaaatgggtagaaattaggg-ttgttctttgtgaatttgttgaagctaatttcttgtaacccatttgtatctcttt 47676216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Original strand, 48408740 - 48408772
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgg 140  Q
    ||||| |||||||||||||||||||||||||||    
T  48408740 ctcttgggttgggaaacattgtaaacaccttgg 48408772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 29 - 504
Target Start/End: Original strand, 11181585 - 11182060
Alignment:
Q  29 ttttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacat 126  Q
    |||||||| |||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||||||    
T  11181585 ttttgaagtagagcttgaagagagagaaacttggtttacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctcttgggttgggaaacat 11181684  T
Q  127 tgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttga 226  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||||| ||||||||||| | ||     
T  11181685 tgtaaacaccttgggtagtgaaatttcaccattggaaggatcaaaaagcttccttttgtg--ttttctcttaggattcattgtgagtgtgggtgacatg- 11181781  T
Q  227 aaaatgggtagaaattatgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgct 325  Q
    ||||||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11181782 aaaatgggtagaaattaggtcttgttcatttgagagcttttaggctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggttgct 11181881  T
Q  326 ctttnnnnnnnagagtaggtcatattggaccgaattgggttaccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattat 423  Q
    || |       ||||||||||||||| ||||||| | ||||||||||||| ||||||||| ||  |||||| | || |||||| || ||| |||||||||    
T  11181882 ctct-ccccctagagtaggtcatattagaccgaactaggttaccatcttg-gtgtgtttg-ttcatttctttcattgcttatctttattgctttgattat 11181978  T
Q  424 gcttgtggtgatgttttacacttagttttaagactg-tttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    |||||||||  || | ||||||||| |||||| ||| ||| |||||||||||||||   ||||||||||  |||||||||||    
T  11181979 gcttgtggtattgctctacacttagatttaagtctgtttttttgttgttgttgcttggagacactttatctattgattacca 11182060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 47 - 504
Target Start/End: Complemental strand, 28832581 - 28832131
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagtt 146  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||     
T  28832581 agagagaaacttggattacaaaggaggtaactttagagttgagtgtctttgtagtgaggttctcttgggttgggaaacattgtaaacaccttgggtagtg 28832482  T
Q  147 acatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgt 246  Q
    | |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||||||||||||||||   ||||||||||||||||||||       
T  28832481 agatttcaccattggaaggatcaaaaagcttccttttgtg--ttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaattagaa 28832384  T
Q  247 cttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggtc 346  Q
    |||||||||| ||  ||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |       ||| ||||||    
T  28832383 cttgttcttt-tgtacttataagctaatttcttgtaactca-ttgtaacactttcatcttagtggattggagggctgctctct--cccccagattaggtc 28832288  T
Q  347 atattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgcttgtggtgatgttttaca 443  Q
    |||||||||||||  ||||  || |||||| ||||||||| ||| |||||| | || |||||| || ||||||||||||||||||||||| || | ||||    
T  28832287 atattggaccgaaccgggtcaacaatcttg-gtgtgtttg-tttgtttctttcattgcttatctttattgatttgattatgcttgtggtgttgctctaca 28832190  T
Q  444 cttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    |||||  ||| | |||||| ||||||||||||||| | |||||||||| ||||||||||||    
T  28832189 cttag-attaggtctgttt-ttgttgttgttgcttgaagacactttatccattgattacca 28832131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 62 - 504
Target Start/End: Original strand, 7160692 - 7161128
Alignment:
Q  62 ttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattgg 161  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||||||||| ||||||||  ||| | |||||| ||||||    
T  7160692 ttacaaatgaggtaactttagggttgagtgtctttgtagtgaggttctcttggattgggaaacattgtaatcaccttggacagtgagatttcatcattgg 7160791  T
Q  162 aaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgag 261  Q
    |||||||||||||||||||||| ||  |||||||||| ||||||||||||||||  ||| ||| ||||||  |||||||||| |||||||||||||||||    
T  7160792 aaggatcaaaaagcttcattttatg--ttttctcttaggattcattgagagtgt-agtgacttaaaaaatatgtagaaattaagtcttgttctttgtgag 7160888  T
Q  262 cttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaatt 361  Q
    |||| || ||||||| ||||||| | |||||||||||||||||| |||||||||||| |||| ||| |       | |||||||||||||| | | || |    
T  7160889 ctttaaatctaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgatctct--cccctatagtaggtcatattgaatcaaact 7160986  T
Q  362 gggttaccatcttgtgtgtgtttgttttctttcttgctttcttatcttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtt 461  Q
    || ||||||| ||| |||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||| || ||||||| ||||||||| ||| ||    
T  7160987 ggattaccattttg-gtgtgtttgttttctttcttgctttcttattttgttgctttgattatgcctgtggtgttgctttacacatagttttaaaactttt 7161085  T
Q  462 tgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    | || || ||||||||| | || || ||| |||||| ||||||    
T  7161086 ttttttttttgttgcttgaagataccttactcattgcttacca 7161128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 11 - 504
Target Start/End: Original strand, 17003694 - 17004185
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagctt-ga-agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||||| | |||||||||||||||||||| || |||||||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||||| |    
T  17003694 taagtgtttctttgcagattttgaaggagagctttgagagagagaaacttggattacaaaggagataactttagggttgaatgtctttgtagtgaggttc 17003793  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--at 206  Q
    |||| |||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||  ||    
T  17003794 tcttgggtttggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtg--ttttctcttaggattcatat 17003891  T
Q  207 tgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatct 305  Q
    || ||| ||| |||   |   |||||||||||||||| ||||||||||| ||| ||||| |||| |||||| ||||||||| |||| |  |||||||||     
T  17003892 tgtgagagtgagtgaaat--taaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagttaattttttgtaactcttttgaaatactttcatca 17003989  T
Q  306 tagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttct 403  Q
    |||||||||| || |||||||| |       ||| ||||||||||||||||||| |||||  || |||||| ||||||||| || ||||||| | || ||    
T  17003990 tagtggattgaagagctgctctct--cccccagattaggtcatattggaccgaactgggtcaacaatcttg-gtgtgtttg-ttcctttctttcattgct 17004085  T
Q  404 tatc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattac 502  Q
    |||| || ||| ||||||||||||||||||| ||  |||||||||| |||| | |||||| |||||||||||||||   ||||||||||  |||||||||    
T  17004086 tatcttttttgctttgattatgcttgtggtgttg-cttacacttagatttaggtctgttt-ttgttgttgttgcttggagacactttatctattgattac 17004183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 65 - 504
Target Start/End: Complemental strand, 19589051 - 19588617
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaag 164  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||| |||||| ||| | ||||||||||||||||    
T  19589051 caaaggaggtaattttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaacatcttgggcagtgagatttcaccattggaag 19588952  T
Q  165 gatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagct 263  Q
    ||||||||| |||| |||||||  |||||||||| |||||||||||| |||||||| |    |||| |||||||||||| ||||||||||| ||| ||||    
T  19588951 gatcaaaaatcttccttttgtg--ttttctcttaggattcattgagattgtgggtgac--acaaaaagggtagaaattaggtcttgttcttgtgtaagct 19588856  T
Q  264 tttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgg 363  Q
    | |||| |||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| |       ||| ||| ||||||||||||||| |||    
T  19588855 tataaggtaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct--ccctaagattagttcatattggaccgaactgg 19588758  T
Q  364 gt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgt 460  Q
    ||  || ||||| || ||||||| || ||||||| | || |||||| || ||| ||||||||||||||||||| || | ||||||||| |||| | || |    
T  19588757 gtcaacaatctt-tgagtgtttg-ttcctttctttcattgcttatctttattgctttgattatgcttgtggtgttgctctacacttagatttaggtct-t 19588661  T
Q  461 ttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    || |||||||||||||||   ||| ||||||  |||||||||||    
T  19588660 tttttgttgttgttgcttggagacgctttatctattgattacca 19588617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 11 - 504
Target Start/End: Complemental strand, 14520592 - 14520100
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| |||||||||||||||||||||||||||||  ||||| | ||||||||||||||| ||||||||||||||||||||||||||||  |    
T  14520592 taagtgttcttgtgcagattttgaaggagagcttgaagagagagaaacttagattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatc 14520493  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---a 205  Q
    |||| ||||||||||||||||||||||||||| |||| | |||||||||||||||||||| ||||||||| |||||||| || ||| ||| | |||   |    
T  14520492 tcttgggttgggaaacattgtaaacaccttggatagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctct-ttagggttcataa 14520395  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
    ||||||| ||||||  |   | |||||||||||||||| ||||||||||| ||| |||||  |||||| ||||||||||||| |||||| ||||||||||    
T  14520394 ttgagagagtgggtaac---acaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatc 14520299  T
Q  305 ttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgt-gtgtgtttgttttctttcttgc-ttt 401  Q
     |||||||||| || |||||||  |       ||| ||||||||||||||||||| |||||  || ||||| | ||||||||| || ||||||| |  |     
T  14520298 atagtggattgaagagctgctc--tcccccctagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttg-ttcctttctttcagtg 14520202  T
Q  402 cttatcttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgatta 501  Q
    ||||||||  || |||| |||||||||||||| || | ||||||||| | || | |||||| |||||||||||||||   |||||||||  |||||||||    
T  14520201 cttatctttgtgctttgtttatgcttgtggtgttgctctacacttagatctaggtctgttt-ttgttgttgttgcttggagacactttacacattgatta 14520103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 47 - 327
Target Start/End: Complemental strand, 10282079 - 10281797
Alignment:
Q  47 agagagaaacttg-gtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaacaccttgggta 143  Q
    ||||||||||||| |  |||||||||||||| ||||||||||||||||||||||||||||| |||||   ||||| ||||||||||||||||||||||||    
T  10282079 agagagaaacttgagaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttgtgaaacattgtaaacaccttgggta 10281980  T
Q  144 gttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--attgagagtgtgggtggcttgaaaaatgggtagaaat 241  Q
    || | |||||||||||||||||||||||||||||  |||||||  |||||||||| |||||  |||| ||||||||||| |    |||||||||||||||    
T  10281979 gtgagatttcaccattggaaggatcaaaaagctttcttttgtg--ttttctcttaggattcatattgtgagtgtgggtgac--acaaaatgggtagaaat 10281884  T
Q  242 tatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    || ||||||||||| ||| ||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||||||| ||||||||    
T  10281883 taggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctct 10281797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 11916707 - 11917023
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaag--agagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||||||||||||||||||||||||  |||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||  |    
T  11916707 taagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaacttggattacaaaggaggtaactttagggttgagtttctttgtagtgaggatc 11916806  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcat-- 206  Q
    |||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||| |||||||  |||||||||| | |||||      
T  11916807 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaa-cttccttttgtg--ttttctcttagggttcatcg 11916903  T
Q  207 tgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatct 305  Q
    |  ||| ||||||| |    ||||||||||||||||| ||||||||||| ||| |||||  || ||| ||||||||||||| |||||| |||||||||      
T  11916904 tttgagagtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaaactattttcttgtaactcttttgtaacactttcatta 11917001  T
Q  306 tagtggattggagggctgctct 327  Q
    ||||||||||||| ||||||||    
T  11917002 tagtggattggagagctgctct 11917023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 47 - 318
Target Start/End: Original strand, 31300368 - 31300638
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagtt 146  Q
    |||||||||||||| || |||||||||||| |||| |||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||     
T  31300368 agagagaaacttggattgcaaaggaggtaactttaaggttgagtgtctttgtagtgaggttctcttgggttgagaaacattgtaaacaccttgggtagtg 31300467  T
Q  147 acatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgt 246  Q
    | |||||||||||||||||||||||| ||||| |||||||  |||||||||| |||||||||||||||||||||   ||| |||||||||||||||| |     
T  31300468 agatttcaccattggaaggatcaaaaggcttccttttgtg--ttttctcttaggattcattgagagtgtgggtgatatgagaaatgggtagaaattagga 31300565  T
Q  247 cttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggag 318  Q
    ||||||||| ||| |||||  || |||  ||||||| |||||| || || ||||||||||||||||||||||||    
T  31300566 cttgttcttgtgtaagcttgcaaactatttttcttgcaactca-ttataacactttcatcttagtggattggag 31300638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 12083912 - 12084226
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaag--agagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||||||||||||||||||| ||||  |||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||  |    
T  12083912 taagtgttcttgtgcagattttgaaggagagctagaagtgagagaaacttggattacaaaggaggtaactttagggttgagtgtctttatagtgaggatc 12084011  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcacca-ttggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--a 205  Q
    |||| |||||| ||||||| ||||||||||||||||| | | ||||||| ||||||||||  ||||||||| ||||||||||||  ||||| |||||  |    
T  12084012 tcttgggttggtaaacattttaaacaccttgggtagtgagaattcaccatttggaaggat--aaaagcttccttttgtgttttt--tcttaggattcata 12084107  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
    ||| ||| ||||||| |   | |||||||||||||||| ||||||||||| ||| |||||||||| |||||||||||||||| |||||| ||||||||||    
T  12084108 ttgtgagagtgggtgac---acaaatgggtagaaattaggtcttgttcttgtgtaagcttttaagttaatttcttgtaactc-tttgtaacactttcatc 12084203  T
Q  305 ttagtggattggagggctgctct 327  Q
     ||||||||||||| ||||||||    
T  12084204 atagtggattggagagctgctct 12084226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 130 - 511
Target Start/End: Original strand, 42127266 - 42127642
Alignment:
Q  130 aaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaa 229  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||  |||||||  |||||||||| |||||||||||||||||||||   ||||||    
T  42127266 aaacaccttgggtagtgagatttcaccattggaaggatcaaaaagctttcttttgtg--ttttctcttaggattcattgagagtgtgggtgatatgaaaa 42127363  T
Q  230 atgggtagaaattatgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctt 328  Q
    ||||||||||| || | ||||||| ||||| ||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||     
T  42127364 atgggtagaaagtaggacttgttcttttgtaagcttataagctaatttcttgtaactca-ttgtaacactttcatcttagtggattggggggctgctctc 42127462  T
Q  329 tnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgc 425  Q
    |       ||| ||||||||||| || |||| |||||  || |||||| ||||||||| || ||||||| | || |||||| || ||| |||||||||||    
T  42127463 t--cccccagattaggtcatattagatcgaactgggtcaacaatcttg-gtgtgtttg-ttcctttctttcattgcttatctttattgttttgattatgc 42127558  T
Q  426 ttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattaccattttctt 511  Q
    |||||||| || | |||| |||| |||||| |||||  |||||||||||||||   |||||||||| |||||||||||| ||||||    
T  42127559 ttgtggtgttgctctacaattagatttaagtctgtt--ttgttgttgttgcttggagacactttatccattgattaccactttctt 42127642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 63 - 327
Target Start/End: Original strand, 33030728 - 33030991
Alignment:
Q  63 tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattgga 162  Q
    |||||| ||||||| ||||||||||||| | ||||||  ||||| ||||| ||||| |||| ||||||| || |||||||||| | ||||||||||||      
T  33030728 tacaaaagaggtaactttagggttgagtat-tttgtaacgaggttctcttgggttgagaaatattgtaatcatcttgggtagtgagatttcaccattga- 33030825  T
Q  163 aggatcaaaaagcttcattttgtgtttt---ttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtg 259  Q
      || ||||||||||| ||| |||||||   |||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||    
T  33030826 --gaacaaaaagcttcctttagtgttttaatttctcttaggattcattgagagtgtgagtgacttgaaaaatgggtagaaattatgttttgttctttgtg 33030923  T
Q  260 agcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    ||||||||||||||||||||||||| |  ||| |||||||||||||||||| ||||||| ||||||||    
T  33030924 agcttttaagctaatttcttgtaaccccattgcatcactttcatcttagtgaattggagagctgctct 33030991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 7 - 327
Target Start/End: Complemental strand, 15464900 - 15464578
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgag 104  Q
    ||||||||||||  ||| ||||||||| |||||||||||||||||||  ||||||| |||||||| ||| || |||||||||||||||||||||||||||    
T  15464900 tatttaagtgttcttgtgcagattttggaggagagcttgaagagagagaaacttggattacaaagaaggaaactttagggttgagtgtctttgtagtgag 15464801  T
Q  105 gtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc 204  Q
    |  ||||| ||||||||||||| |||||||||||||||||| | |||||||||||||||||||| ||||||||| |||||||| || ||| ||| | |||    
T  15464800 gatctcttgggttgggaaacatcgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctcttttagggttc 15464702  T
Q  205 ---attgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcactt 299  Q
       |||| ||| |||||   |   | |||||||||||||||| ||||||||||| ||| |||||  ||||||  ||||||||||||| |||||| |||||    
T  15464701 attattgtgagagtgggaaac---acaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaactc-tttgtaacactt 15464606  T
Q  300 tcatcttagtggattggagggctgctct 327  Q
    ||||| ||||||||||||| ||||||||    
T  15464605 tcatcatagtggattggagagctgctct 15464578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 24553261 - 24553494
Alignment:
Q  11 taagtgtttctgttcagatttt-gaaggagagcttgaagaga--gaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggta 107  Q
    ||||||||||| | |||||||| |||||||| |||  |||||  ||||||||| ||||||||||||||| || ||||||||||||||||||||||||||     
T  24553261 taagtgtttctttgcagatttttgaaggagaacttttagagaaagaaacttggattacaaaggaggtaacttaagggttgagtgtctttgtagtgaggtt 24553360  T
Q  108 ctcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcatt 207  Q
    ||||| |||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||| |||||||  ||||||||||  |||||||    
T  24553361 ctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattagaaggatcaaaaagcttccttttgtg--ttttctcttagaattcatt 24553458  T
Q  208 gagagtgtgggtggcttgaaaaatgggtagaaatta 243  Q
     |||||||||||    | ||||||||||||||||||    
T  24553459 aagagtgtgggtcatataaaaaatgggtagaaatta 24553494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 47 - 327
Target Start/End: Original strand, 9353105 - 9353383
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagtt 146  Q
    |||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||     
T  9353105 agagagaaacttggattacaaaggaggtaactttagggttaagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtg 9353204  T
Q  147 acatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---attgagagtgtgggtggcttgaaaaatgggtagaaatta 243  Q
    | |||||||||||||||||||| ||||||||| |||||||| || ||| ||| | |||   |||||||| |||||   |   | ||||||||||||||||    
T  9353205 agatttcaccattggaaggatc-aaaagcttccttttgtgtcttctct-ttaaggttcattattgagagagtgggaaac---acaaatgggtagaaatta 9353299  T
Q  244 tgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
      |||||||||| ||| |||||  |||||  ||||||||||||| |||||| |||||||||| ||||||||||||| ||||||||    
T  9353300 gatcttgttcttgtgtaagcttgcaagcttttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctct 9353383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 63 - 327
Target Start/End: Complemental strand, 3880610 - 3880345
Alignment:
Q  63 tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaacaccttgggtagttacatttcaccattg 160  Q
    |||||||||||||| || || |||||||||| |||||||||||| |||||   ||||| |||||||||||||||| |||||| || | ||||||||||||    
T  3880610 tacaaaggaggtaacttgagagttgagtgtccttgtagtgaggttctcttgagggttgagaaacattgtaaacacattgggttgtgagatttcaccattg 3880511  T
Q  161 gaaggatcaaaaagcttcattttgtgttttttctcttatgattc--attgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tg 257  Q
    |||||||||||||||||| |||  ||||||||||| || |||||  |||| ||| ||||||| |    ||||||||||||||||| ||||||||||| ||    
T  3880510 gaaggatcaaaaagcttccttt--tgttttttctcctaggattcatattgtgagagtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtg 3880415  T
Q  258 tgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    | ||||| ||| ||||||||||||||||| |||||| |||||||||| ||||||||||||| ||||||||    
T  3880414 taagcttgtaaactaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctct 3880345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 7 - 327
Target Start/End: Original strand, 36932080 - 36932401
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttga-agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgagg 105  Q
    ||||||||||||  ||| ||| ||||| |||||||||  | |||||||||||||| || ||||||||| || ||||||||||||||||||| |||||| |    
T  36932080 tatttaagtgttcttgtgcagtttttggaggagagctgaagagagagaaacttggattgcaaaggagggaactttagggttgagtgtctttatagtgatg 36932179  T
Q  106 tactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc- 204  Q
      ||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| | |||||| || | | ||| | |||     
T  36932180 atctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttcctcttgtgtcttctgttttagggttca 36932278  T
Q  205 --attgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcacttt 300  Q
      |||||||| |||||   |   | |||||||||||||||| ||||||||||| ||| | |||  ||||||  ||||||||||||| |||||| ||||||    
T  36932279 ttattgagagagtgggaaac---acaaatgggtagaaattaagtcttgttcttatgtaaacttgcaagctatttttcttgtaactc-tttgtaacacttt 36932374  T
Q  301 catcttagtggattggagggctgctct 327  Q
    |||| ||||||||||||| ||||||||    
T  36932375 catcatagtggattggagagctgctct 36932401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 149 - 327
Target Start/End: Complemental strand, 6742072 - 6741898
Alignment:
Q  149 atttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtct 248  Q
    |||||||||||| ||| ||||||||| |||  | ||||||||||||  || ||||||||||||||||||||| ||||||||||| |||||||||| || |    
T  6742072 atttcaccattgaaagaatcaaaaagattc--tctgtgttttttct--taggattcattgagagtgtgggtgacttgaaaaatgagtagaaattaggttt 6741977  T
Q  249 tgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    ||||||||||||| ||  |||||||||||||||||||  |||||||||||| ||||||| |||||||||| ||||||||    
T  6741976 tgttctttgtgagtttgcaagctaatttcttgtaacttctttgtatcacttccatcttaatggattggagagctgctct 6741898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 149 - 325
Target Start/End: Complemental strand, 2630453 - 2630279
Alignment:
Q  149 atttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtct 248  Q
    |||||||||||| ||||||||||||||||| ||| |||||||  |||||| ||||||||| ||||| ||||| |||||||||||  || |||||| || |    
T  2630453 atttcaccattgaaaggatcaaaaagcttcctttagtgtttt--ctcttaggattcattgtgagtgagggtgacttgaaaaatgtataaaaattaggttt 2630356  T
Q  249 tgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgct 325  Q
    ||||||||||| | |||||||||||||| ||||||| | ||||||||||||||||| |||||||||| || ||||||    
T  2630355 tgttctttgtgtgtttttaagctaatttattgtaacccttttgtatcactttcatcatagtggattgaagagctgct 2630279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 38 - 327
Target Start/End: Complemental strand, 38219735 - 38219444
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| |||||||||||| || | ||||||||||||||||||||||||||  ||||| |||||||  |||||||||||||||    
T  38219735 agagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacac 38219636  T
Q  136 cttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--attgagagtgtgggtggcttgaaaaatgg 233  Q
    |||||||||| | ||||||||||||||||||||  |||||||| | |||||| || ||| ||| | |||  |||| ||| ||||  ||    | ||||||    
T  38219635 cttgggtagtgagatttcaccattggaaggatc-taaagcttcctcttgtgtcttctcttttagggttcatattgtgagagtgg--ggaaacacaaatgg 38219539  T
Q  234 gtagaaattatgtcttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    ||||||| || | ||||||||| ||| |||||  ||||||  ||||||||||| | |||||| |||||||||| ||||||||||||| ||||||||    
T  38219538 gtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaac-cctttgtaacactttcatcatagtggattggagagctgctct 38219444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 50 - 172
Target Start/End: Original strand, 42127146 - 42127268
Alignment:
Q  50 gagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagttaca 149  Q
    ||||||||||| ||||||||||||||| |||| |||||||| ||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||| | |    
T  42127146 gagaaacttggattacaaaggaggtaactttaaggttgagtatctttgtagtgaggttctcttgggttgagaaacattgtatacaccttgggtagtgaga 42127245  T
Q  150 tttcaccattggaaggatcaaaa 172  Q
    |||||||||||||||||||||||    
T  42127246 tttcaccattggaaggatcaaaa 42127268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 38 - 173
Target Start/End: Complemental strand, 35387999 - 35387862
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgg--gaaacattgtaaacac 135  Q
    |||||||  ||||| |||||||| |||||||||||| || | ||||||||||||||||||||| ||||  ||||| ||||||   ||||||||||| |||    
T  35387999 agagcttagagagaaaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttggaaaaaacattgtaatcac 35387900  T
Q  136 cttgggtagttacatttcaccattggaaggatcaaaaa 173  Q
    |||||||||| | |||||||||||||||||||| ||||    
T  35387899 cttgggtagtgagatttcaccattggaaggatctaaaa 35387862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 42426551 - 42426432
Alignment:
Q  25 cagattttgaaggagagcttgaa--gagagaaacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    |||||||||||||||||||||||  |||||||||||||   | |||||||||||| |||||||||||| ||||||| | |   || ||||||| ||||||    
T  42426551 cagattttgaaggagagcttgaaaagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg-attagagttctcttagattggga 42426453  T
Q  122 aacattgtaaacaccttgggt 142  Q
    |||||||||||||||||||||    
T  42426452 aacattgtaaacaccttgggt 42426432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 267 - 501
Target Start/End: Original strand, 24553499 - 24553729
Alignment:
Q  267 aagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt- 365  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||| |||| ||||||||| |       ||| ||||||||||||||||||| ||| |     
T  24553499 aagctaatttcttgtaactca-ttgtaacactttcatcttagtggagtgga-ggctgctctct--cccatagattaggtcatattggaccgaactggatc 24553594  T
Q  366 taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttg 463  Q
     || |||||| ||||||||| || ||||||| | || |||||| || ||| ||||||||||||||||||| |  | ||||||||| |||| | ||||||     
T  24553595 aacaatcttg-gtgtgtttg-ttcctttctttcattgcttatctttattgctttgattatgcttgtggtgtttctctacacttagatttaggtctgttt- 24553691  T
Q  464 ttgttgttgttgcttaaggacactttattcattgatta 501  Q
    |||||| ||||||||   |||||||||| |||||||||    
T  24553692 ttgttgatgttgcttggagacactttatccattgatta 24553729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 33831692 - 33831768
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| || |||||||||||||||||  |||||||||||||||||||| |||||||||| ||||    
T  33831692 gaaaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatctcttt 33831768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 30683236 - 30683119
Alignment:
Q  25 cagattttgaaggagagcttgaaga--gagaaacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    |||||||||||||||||||||||||  |||||||||||   | || |||||||||||||||||||||| ||||||| | |   || ||||| ||||| ||    
T  30683236 cagattttgaaggagagcttgaagagagagaaacttgggaaatcagaggaggtaattttagggttgagggtctttg-attagagttctcttgggttgcga 30683138  T
Q  122 aacattgtaaacaccttgg 140  Q
    |||||||||||||||||||    
T  30683137 aacattgtaaacaccttgg 30683119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 13488055 - 13488174
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||||||||| |||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | |   || ||||| |||||| |    
T  13488055 cagattttgaaggagagctagaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg-attagagttctcttgggttggaa 13488153  T
Q  122 aacattgtaaacaccttgggt 142  Q
    |||||||||||||||||||||    
T  13488154 aacattgtaaacaccttgggt 13488174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 168
Target Start/End: Complemental strand, 24136177 - 24136053
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacaccttgggtag 144  Q
    |||||||||||||| |||||||||||| ||    ||||||||||||||||||||  ||   ||||| |||||||  ||||||||||| ||||||||||||    
T  24136177 agagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagaaagtgtctcttgggttgggaaaaacattgtaatcaccttgggtag 24136078  T
Q  145 tta-catttcaccattggaaggatc 168  Q
    | |  | ||||||||||||||||||    
T  24136077 tgaggagttcaccattggaaggatc 24136053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 28750971 - 28750852
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||| |||||||||||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | |   || ||||| ||||||||    
T  28750971 cagattttgaaagagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg-attagagttctcttgggttggga 28750873  T
Q  122 aacattgtaaacaccttgggt 142  Q
    ||||||| |||||||||||||    
T  28750872 aacattgaaaacaccttgggt 28750852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 28278330 - 28278404
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||||||||||||||||  ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  28278330 aaaatgggtagaaattatgg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 28278404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 8566100 - 8566031
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatc 295  Q
    ||||||||||||| ||| || |||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  8566100 aaaatgggtagaacttaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatc 8566031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 298
Target Start/End: Complemental strand, 30900108 - 30899942
Alignment:
Q  129 taaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaa 228  Q
    ||||||||||||||||| | ||||||  |  |||||||| |||||||||  ||| ||||||| |||   | ||||| ||| | || || |||||||||||    
T  30900108 taaacaccttgggtagtgagatttcattagaggaaggataaaaaagctttctttagtgttttctct---aggattctttgtgggtttgagtggcttgaaa 30900012  T
Q  229 aatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcact 298  Q
    |||  ||||||| ||    ||||||||||||||||| || ||||||||||||||||   |||||||||||    
T  30900011 aatcagtagaaaatagagtttgttctttgtgagcttgtaggctaatttcttgtaacctctttgtatcact 30899942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 39468862 - 39468749
Alignment:
Q  28 attttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaac 124  Q
    ||||||||||||||||||||||||||  |||||||   | |||||||||||| |||||||||||| ||||||  | |   || ||||| |||||||||||    
T  39468862 attttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt-cattagagttctcttgggttgggaaac 39468764  T
Q  125 attgtaaacaccttg 139  Q
    |||||||||||||||    
T  39468763 attgtaaacaccttg 39468749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 42926727 - 42926864
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaagagag--aaacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtga 103  Q
    ||||||||||||||||||||||||||| | |||||||| |||||||  ||||||||   | |||| ||||||| |||||| ||||  ||||||| | |      
T  42926727 tatttaagtgtttctgttcagattttggatgagagcttcaagagagaaaaacttgggaaatcaaatgaggtaactttaggattgatggtctttg-attag 42926825  T
Q  104 ggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
     || ||||| | |||||||||||||||||||||||||||    
T  42926826 agttctcttggattgggaaacattgtaaacaccttgggt 42926864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 16452092 - 16452168
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| || ||||||||| ||||||| |  |||||||||||||||||| |||||||||| ||||    
T  16452092 gaaaaatgggtagaaattaagt-ttgttctttctgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 16452168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 533621 - 533740
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||||||| |||||||||||  || ||||   | |||||||||||| |||||||||| | |||||||    ||| | ||||| ||||||||    
T  533621 cagattttgaaggagaggttgaagagagagaaatttgggaaatcaaaggaggtaactttagggttgggggtctttgattagagtt-ctcttgggttggga 533719  T
Q  122 aacattgtaaacaccttgggt 142  Q
    |||||||||||||||||||||    
T  533720 aacattgtaaacaccttgggt 533740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 138
Target Start/End: Complemental strand, 3075931 - 3075859
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacacctt 138  Q
    |||||||||||| |||||||||||| ||||||| | | | || ||||| |||||||||||||||||||||||||    
T  3075931 caaaggaggtaactttagggttgagggtctttg-attaaagttctcttgggttgggaaacattgtaaacacctt 3075859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 42428746 - 42428627
Alignment:
Q  25 cagattttgaaggagagcttgaaga--gagaaacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    |||||||||||||||||||||||||  |||||||||||   | |||||||| ||| |||||||||||  ||||||| | |   || ||||| ||||||||    
T  42428746 cagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg-attagagttctcttgggttggga 42428648  T
Q  122 aacattgtaaacaccttgggt 142  Q
    || ||||||||||||||||||    
T  42428647 aatattgtaaacaccttgggt 42428627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 213479 - 213553
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  213479 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttaaagctaatttcttgtaacccatttgtatctcttt 213553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 5887570 - 5887496
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||| |||||||||  | |||||||||||||||||  |||||||||||||||| ||| |||||||||||||||    
T  5887570 aaaatggatagaaattagat-ttgttctttgtgagcttgtttaagctaatttcttgcaacccatttgtatcacttt 5887496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 32636838 - 32636912
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||||||||||||||||  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  32636838 aaaatgggtagaaattatgg-ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctcttt 32636912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 38747019 - 38747093
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  38747019 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 38747093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 40147275 - 40147349
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||||| |||||||| |  ||||||||||||||||||||||||||||| ||||    
T  40147275 aaaatgggtagaaattaggg-ttgttcttcgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 40147349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 25412614 - 25412731
Alignment:
Q  25 cagattttgaaggagagcttga--agagagaaacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||||||||||||  ||||||||||||||   | ||||||||| ||  |||||||| || ||||||| | |   || ||||| ||||||||    
T  25412614 cagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggcaacattagggtttagggtctttg-attagagttctcttgggttggga 25412712  T
Q  122 aacattgtaaacaccttgg 140  Q
    |||||||||||||||||||    
T  25412713 aacattgtaaacaccttgg 25412731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 28537615 - 28537552
Alignment:
Q  387 tttctttcttgctttcttatctt-gttgattt-gattatgcttgtggtgatgttttacacttag 448  Q
    |||| |||||||||||||||||| |||||||| ||||||| |||||||| ||||||||||||||    
T  28537615 tttcattcttgctttcttatctttgttgattttgattatgtttgtggtgctgttttacacttag 28537552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 36074360 - 36074243
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    |||||||||||||||||||||||||||||  |||||||   | ||||||| | || ||||||||| || |||||||    ||| | ||||| ||||||||    
T  36074360 cagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagtt-ctcttgggttggga 36074262  T
Q  122 aacattgtaaacaccttgg 140  Q
    |||||||||||||||||||    
T  36074261 aacattgtaaacaccttgg 36074243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 5887689 - 5887613
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||| |||||||||||| || ||||    ||| | ||||| |||||||||||||||||||||||||||||    
T  5887689 caaaggaggtaactttagggttgagggtatttgattagagtt-ctcttgggttgggaaacattgtaaacaccttgggt 5887613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 228 - 327
Target Start/End: Complemental strand, 38192319 - 38192219
Alignment:
Q  228 aaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggagggctgct 325  Q
    ||||||||||||| || | ||||||||| ||| |||||  |||||| ||| |||||||| | |||||| |||||||||| ||||||||||||| ||||||    
T  38192319 aaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 38192221  T
Q  326 ct 327  Q
    ||    
T  38192220 ct 38192219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 538039 - 538113
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||| ||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  538039 aaaatgggtagaaattaagg-ttgctctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 538113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 504
Target Start/End: Complemental strand, 3880259 - 3880174
Alignment:
Q  415 tttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    ||||||||||||||||||| || ||||||||||| |||| | ||||||    ||||||||| || | ||||||||||  |||||||||||    
T  3880259 tttgattatgcttgtggtgttgctttacacttagatttaggtctgttt----ttgttgttgattgaagacactttatctattgattacca 3880174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 13488217 - 13488291
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  13488217 aaaatgggtagaaattaggg-ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt 13488291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 39468703 - 39468629
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  39468703 aaaatgggtagaaattaggg-ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt 39468629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 42428584 - 42428510
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||||||||||||||||  || |||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  42428584 aaaatgggtagaaattatggttt-ttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt 42428510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 3075812 - 3075743
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatc 295  Q
    ||||| ||||||||||| || |||||||||||||||||  | || ||||||||||||||| ||||||||||    
T  3075812 aaaataggtagaaattaggt-ttgttctttgtgagcttgctgaatctaatttcttgtaacccatttgtatc 3075743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 13239647 - 13239721
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgg 140  Q
    |||||||||||| |||| ||||||| |||||||    ||| | ||||| |||||||||||||||||||||||||||    
T  13239647 caaaggaggtaactttatggttgagggtctttgattagagtt-ctcttgggttgggaaacattgtaaacaccttgg 13239721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 13342913 - 13343030
Alignment:
Q  25 cagattttgaaggagagcttga--agagagaaacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||||||||||||  ||||||||||||||   | ||||||| | || ||||||||| || |||| || | |   || ||||| ||||||||    
T  13342913 cagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtctctg-attagagttctcttgggttggga 13343011  T
Q  122 aacattgtaaacaccttgg 140  Q
    |||||||||||||||||||    
T  13343012 aacattgtaaacaccttgg 13343030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 142
Target Start/End: Original strand, 19806321 - 19806355
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||| |||||||||||||||||||||||||||||    
T  19806321 ctcttgggttgggaaacattgtaaacaccttgggt 19806355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 313
Target Start/End: Complemental strand, 5611398 - 5611202
Alignment:
Q  116 ttgggaaacattg-taaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattga-gagt 213  Q
    ||||||||||||| |||||||||| | || | | ||||||  |||| || |||||||||||||  ||| |||||||  |||||| || ||||| | ||||    
T  5611398 ttgggaaacattggtaaacaccttagttaatgagatttcattattgaaaagatcaaaaagcttgctttagtgtttt--ctcttaggaatcatttatgagt 5611301  T
Q  214 gtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaa-ctcatttgtatcactttcatcttagtgga 312  Q
    ||   || ||| |||||||| ||||||| |  | ||||||||||||| ||||||||||||||| || ||| ||| ||||||||| ||| ||| |||||||    
T  5611300 gtttatgactt-aaaaatggatagaaataagattttgttctttgtgaacttttaagctaattttttttaatctc-tttgtatcagttttatcatagtgga 5611203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 37439000 - 37439072
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtct 94  Q
    |||||||||||||||||||||||||||||  |||||||   | |||| ||||||| |||||||||||| ||||    
T  37439000 cagattttgaaggagagcttgaagagagagaaacttggaaaatcaaatgaggtaactttagggttgagggtct 37439072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 300
Target Start/End: Original strand, 42926922 - 42926955
Alignment:
Q  267 aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||||||||||||| ||||    
T  42926922 aagctaatttcttgtaactcatttgtatctcttt 42926955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 533783 - 533857
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagct--tttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||| ||||||||||||  || |||||||||| ||||||| |||||||||| ||||    
T  533783 aaaatgggtagaaatta-gggttggtctttgtgagcttgttgaagctaattttttgtaacccatttgtatctcttt 533857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 502
Target Start/End: Complemental strand, 5611135 - 5611015
Alignment:
Q  383 ttgttttctttcttgctttcttatctt-gttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaag 481  Q
    |||||||||| | | |||||||||||| |||| ||||| ||| ||| ||||| ||||| || ||||| | || |  |||||||| || ||||||||||||    
T  5611135 ttgttttcttcccttctttcttatctttgttgctttgaatattcttatggtgttgtttcactcttagatctaggtttgtttgttatttttgttgcttaag 5611036  T
Q  482 gacactttattcattgattac 502  Q
       |||||| |||||||||||    
T  5611035 actactttactcattgattac 5611015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 53
Target Start/End: Original strand, 19806258 - 19806286
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga 53  Q
    |||||||||||||||||||||||||||||    
T  19806258 cagattttgaaggagagcttgaagagaga 19806286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 28537712 - 28537672
Alignment:
Q  287 atttgtatcactttcatcttagtggattggagggctgctct 327  Q
    |||| ||||||||| ||||||||||||||||| ||||||||    
T  28537712 atttatatcacttttatcttagtggattggagagctgctct 28537672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 31182986 - 31183059
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagct--tttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||||||||||| |  |||||| |||||||||||||| |||||||||| ||||    
T  31182986 aaaatgggtagaaatta-ggattgttctttgtgagtttgtttaagttaatttcttgtaac-catttgtatcccttt 31183059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 42310085 - 42310015
Alignment:
Q  231 tgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||| | || ||| ||||||||||||| |  |||||||||||||||||||| |||||||| ||||    
T  42310085 tgggtagaaatcaagt-ttgatctttgtgagcttgttgaagctaatttcttgtaactcttttgtatctcttt 42310015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 100)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 11 - 477
Target Start/End: Original strand, 39774039 - 39774492
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttgg-tttacaaaggaggtaattttagggttgagtgtctttgtagtgaggta 107  Q
    ||||||||| |||||||||||||||| |||| || ||||||||  ||||||| |||||||||||||||| ||||||||||||  | ||||||  |||||     
T  39774039 taagtgtttatgttcagattttgaagtagagtttaaagagagagaaacttgggtttacaaaggaggtaactttagggttgagattatttgtaacgaggtt 39774138  T
Q  108 ctcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcatt 207  Q
    |||||  ||||||||||||||||||||||||||||||| |  |||||||||||||| |||||||||||||| |||  ||| |||||||||  ||||||||    
T  39774139 ctcttgagttgggaaacattgtaaacaccttgggtagtgagttttcaccattggaatgatcaaaaagcttccttt--tgtattttctcttgggattcatt 39774236  T
Q  208 gagagtgtgggtggcttgaaaaatgggtagaaattatgtcttg-ttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctt 306  Q
    ||||||||| ||| | || ||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||    
T  39774237 gagagtgtgagtgacatg-aaaattggtagaaattaggtcttgtttctttgtgagcttttaagctaatttcttgtaacctatttgtatcactttcatttt 39774335  T
Q  307 agtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggttaccatcttgtgtgtgtttgttttctttcttgctttcttat 406  Q
    |||||||||||| |||||||| |       ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||    
T  39774336 agtggattggagagctgctctat--cccccagagtaggtcatattggaccgaactgagttaccatcttgtgtgtgtttgttttctttcttgctatcttat 39774433  T
Q  407 cttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgct 477  Q
    ||||||| |||||||||||            |||||||||||||||| |||||||||||||||||||||||    
T  39774434 cttgttgttttgattatgc------------tttacacttagttttaggactgtttgttgttgttgttgct 39774492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 47 - 501
Target Start/End: Original strand, 1983072 - 1983522
Alignment:
Q  47 agagagaaacttgg-tttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagt 145  Q
    ||||||| |||||| ||||||||| |||||| |||||||||||||||||||||||||||||  |||| ||||| | ||||||||||||||| ||| ||||    
T  1983072 agagagagacttgggtttacaaagaaggtaactttagggttgagtgtctttgtagtgaggttatcttgggttgtgtaacattgtaaacaccctggttagt 1983171  T
Q  146 tacattt-caccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattat 244  Q
     | |||| ||||||||||||||| |||||||||| ||||| |||||  |||||| |||||||||||||||| |||| ||||||||| || ||||||||||    
T  1983172 aagattttcaccattggaaggataaaaaagcttccttttgggtttt--ctcttaggattcattgagagtgtaggtgacttgaaaaa-ggatagaaattat 1983268  T
Q  245 gtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtagg 344  Q
    || |||||||||||||||||  |||||||||||||||||| | ||||||||||||| ||| ||||||||||||| |||||| | |       | ||||||    
T  1983269 gttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctagtggattggagagctgctatct--cccccatagtagg 1983366  T
Q  345 tcatattggaccgaattgggttaccatcttgtgtgtgtttgttttctttcttgctttcttatcttgttgatttgattatgcttgtggtgatgttttacac 444  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||| |||||||    
T  1983367 tcatattggaccgaactgggttaccatattg-gtgtgtttgttttctttcttgctttcttatattgttgttttgattatgtttgtggtgatgctttacac 1983465  T
Q  445 ttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgatta 501  Q
    |||| |||||| | |||||||||||||||||||| |   |||||||| |||||||||    
T  1983466 ttagatttaagtcagtttgttgttgttgttgcttgaacccactttatccattgatta 1983522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 11 - 502
Target Start/End: Complemental strand, 18377715 - 18377244
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagaga--gaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||||||||||| |||||||||||||||||||||||  ||||||||| ||||||||||| ||| |||      |||||| ||||||||||||| |    
T  18377715 taagtgtttctgttcagtttttgaaggagagcttgaagagaaagaaacttggattacaaaggagttaacttt------gagtgtatttgtagtgaggttc 18377622  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattg 208  Q
    |||| || ||| ||||||||||||| ||||||||| | | |||| ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  18377621 tcttgggatggaaaacattgtaaaccccttgggtaatgagattttaccattggaaggatcaaaaagcttcattttgtgttttt--tcttaggattcattg 18377524  T
Q  209 agagtgtgggtggcttgaaaaatgggtagaaattatgtcttg-ttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctta 307  Q
      |||||||||| | || ||||||||||||||||| | |||| ||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  18377523 taagtgtgggtgacatg-aaaatgggtagaaattagggcttgtttctttgtgagcttttaagctgatttcttataacccatttgtatcactttcatctta 18377425  T
Q  308 gtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggttaccatcttgtgtgtgtttgttttctttcttgctttcttatc 407  Q
    ||||| |||||||||||||| |       |||||||||||||| | || ||| ||||||||||||||| ||||||||||||||||  ||               
T  18377424 gtggaatggagggctgctctct--cctccagagtaggtcatatagaactgaactgggttaccatcttg-gtgtgtttgttttcttattt----------- 18377339  T
Q  408 ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattac 502  Q
    |||||| |||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  18377338 ttgttgctttgattatgcttgtggttatgctttacacttagttttaggactgtttgttgttgttgttgcttgaggacactttatccattgattac 18377244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 35 - 478
Target Start/End: Complemental strand, 5112576 - 5112137
Alignment:
Q  35 aggagagcttgaagagaga--aacttg-gtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaa 131  Q
    |||||||||||||||||||  |||||| | |||||||||||||||||||||| |||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  5112576 aggagagcttgaagagagagaaacttgagattacaaaggaggtaattttaggtttgagtgtctttgttgtgaggttctcttgggttgggaaacattgtaa 5112477  T
Q  132 acaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaat 231  Q
    |||||||||||||| | |||||||||||||||||||||||||||||| |||| ||  |||||||||| ||||||||| ||||||| ||| ||| ||||||    
T  5112476 acaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttatg--ttttctcttaggattcattgtgagtgtgagtgacttaaaaaat 5112379  T
Q  232 gggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnn 331  Q
     |||| |||||| |||| ||| ||| |||| |||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| |||||||  |      
T  5112378 aggtacaaattaggtctcgttttttatgagtttttaagctaatttcttgtaacccatttgtaacactttcatattagtggattggagagctgctc--tca 5112281  T
Q  332 nnnnnagagtaggtcatattggaccgaattgggttaccatcttgtgtgtgtttgttttctttcttgctttcttatcttgttgatttgattatgcttgtgg 431  Q
         | ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||| | ||||||||| |||||| ||||   |||| |||||    
T  5112280 cccccaaagtagatcatattggaccgaactgggttaccatcttg-gtgtgtttgttttctttcgtactttcttatattgttgctttg---atgcctgtgg 5112185  T
Q  432 tgatgttttacacttagttttaagactg-tttgttgttgttgttgctt 478  Q
    || || |||||||  |||||||| |||| |||||||||||||||||||    
T  5112184 tgttgctttacacaaagttttaaaactgttttgttgttgttgttgctt 5112137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 11 - 504
Target Start/End: Complemental strand, 10047743 - 10047250
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| |||||||||||||||||||||||||||||  ||||||| ||||||||||||||| |||||||||||||||||||||| |||||  |    
T  10047743 taagtgttcttgtgcagattttgaaggagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtaatgaggatc 10047644  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---a 205  Q
    |||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||| |||||||  |||| ||||| |||||   |    
T  10047643 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaaacttccttttgtg--ttttgtcttaggattcatta 10047546  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
    ||||||||||||||| |    ||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||| |||||| ||||||||||    
T  10047545 ttgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatc 10047448  T
Q  305 ttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttc 402  Q
     |||||||||||||||||||||| |       ||| ||||||||||||||||||| |||||  || |||||| ||||||||| || ||||||| | ||      
T  10047447 atagtggattggagggctgctctct--cccccagattaggtcatattggaccgaactgggtcaacaatcttg-gtgtgtttg-ttcctttctttcattgt 10047352  T
Q  403 ttatc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgatta 501  Q
    ||||| || ||| ||||||||||||||||||| || | ||||||||| | || | || ||| |||||||| ||||||   |||||||||| |||||||||    
T  10047351 ttatctttattgctttgattatgcttgtggtgttgctctacacttagatctatgtctattt-ttgttgttattgcttggagacactttatccattgatta 10047253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 11 - 504
Target Start/End: Original strand, 42599310 - 42599803
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaag--agagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||||| | ||||||||||||||||||||  ||  |||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||| |    
T  42599310 taagtgtttctttgcagattttgaaggagagcttttagtgagagaaacttggattacaaaggaggtaactttagg-ttgagtgtctttgtagtgaggttc 42599408  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattg 208  Q
    |||| |||||||||||||| ||||||||||||||||| | ||||||||||||||||||| ||||| |||| |||||||  |||||||||| |||||||||    
T  42599409 tcttcggttgggaaacattctaaacaccttgggtagtgagatttcaccattggaaggataaaaaaacttccttttgtg--ttttctcttaggattcattg 42599506  T
Q  209 agagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctta 307  Q
    |||||| ||||| |    ||||||||||||||||| ||||||||| ||||| ||||| |||||||||||||||||||||| ||||| || ||||||||||    
T  42599507 agagtgcgggtgac--acaaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactca-ttgtaacattttcatctta 42599603  T
Q  308 gtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttctta 405  Q
    ||||||||||||| |||||| |       | | || |||||||||||| |||||||||  || |||||| ||||||||| || ||||||| | || ||||    
T  42599604 gtggattggagggttgctctctctcccccatattatgtcatattggactgaattgggtcaacaatcttg-gtgtgtttg-ttcctttctttcattgctta 42599701  T
Q  406 tc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttg--ttgttgttgttgcttaaggacactttattcattgattac 502  Q
    || || ||| ||||||||||||||||||| || | |||| |||| | || |  ||||||  |||||||||||||||   | ||||||||  |||||||||    
T  42599702 tctttattgctttgattatgcttgtggtgttgctctacatttagatctaggtttgtttgttttgttgttgttgcttggagtcactttatctattgattac 42599801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 16623028 - 16623344
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||| ||| ||||||||||||||||||| ||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |    
T  16623028 taagtgtttttgtgcagattttgaaggagagctagaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatc 16623127  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--at 206  Q
    |||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| |||||||  |||||| ||| |||||  ||    
T  16623128 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtg--ttttcttttaggattcatat 16623224  T
Q  207 tgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatct 305  Q
    || ||| ||||||| |    ||||||||||||||||| ||||||||||| ||| ||||| | ||||||||||||||||||| |||||| ||||||||||     
T  16623225 tgtgagagtgggtgac--acaaaatgggtagaaattaggtcttgttcttctgtaagcttattagctaatttcttgtaactcttttgtaacactttcatca 16623322  T
Q  306 tagtggattggagggctgctct 327  Q
    ||||||||||||| ||||||||    
T  16623323 tagtggattggagagctgctct 16623344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 11 - 504
Target Start/End: Original strand, 5268935 - 5269420
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |    
T  5268935 taagtgttcttgtgcagattttgaaggagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatc 5269034  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---a 205  Q
    |||| ||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||   |    
T  5269035 tcttgggttgggaaacattgtaaacaccttggatagtgagatttcaccattggaaggatcaaaaagcttccttttgtg--ttttctcttaggattcatta 5269132  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
    ||||||||||||||| |    | ||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||           ||||||||||    
T  5269133 ttgagagtgtgggtgac--acacaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaa-----------cactttcatc 5269219  T
Q  305 ttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttc 402  Q
     |||||||||||||||||||||| |       ||| ||||||||||||||||||| | |||  || ||||||| |||||||| || ||||||| | ||||    
T  5269220 atagtggattggagggctgctctct--cccccagattaggtcatattggaccgaactaggtcaacaatcttgt-tgtgtttg-ttcctttctttcatttc 5269315  T
Q  403 ttat-cttgttgatttgattatgcttgtggtgatgttttacacttagttttaag--actgtttgttgttgttgttgcttaaggacactttattcattgat 499  Q
    ||||  || ||| ||||||||||||||||||| || | ||||||||| | || |    | |||||||||||||||||||   |||||||||| |||||||    
T  5269316 ttatatttattgctttgattatgcttgtggtgttgctctacacttagatctaggtatatttttgttgttgttgttgcttggagacactttatccattgat 5269415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 11 - 504
Target Start/End: Original strand, 25861768 - 25862248
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||||| | ||||||||||||||||||||  ||||  |||||||||| |||||||| |||||| ||||||||||||||||||||||||||||  |    
T  25861768 taagtgtttctttgcagattttgaaggagagcttttagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttgtagtgaggatc 25861867  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattg 208  Q
    |||| |||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||    
T  25861868 tcttgggttgggaaacattgtaaacaccttgagtagtgagatttcaccattggaaggatcaaaaaacttccttttgtg-tttttctcttaggattcattg 25861966  T
Q  209 agagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctta 307  Q
    |||||||||||| |    ||||||||||| ||||| ||||||||||| ||| ||||| ||||||||||||||||||           |||||||||| ||    
T  25861967 agagtgtgggtgac--acaaaatgggtaggaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaa-----------cactttcatcata 25862053  T
Q  308 gtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttctta 405  Q
    |||||||||||||| ||||| |       | | ||||||||||||||||||| || ||  || |||||| ||||||||  || ||||||| | || ||||    
T  25862054 gtggattggagggccgctctct--tccccatattaggtcatattggaccgaactgagtcaacaatcttg-gtgtgttt-attcctttctttcattgctta 25862149  T
Q  406 tc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    || || ||| ||||||||||||||||||| || | ||||||||| |||| | |||||| |||||||||||||||   ||||||||||  |||||||||||    
T  25862150 tctttattgctttgattatgcttgtggtgttgctctacacttagatttaggtctgttt-ttgttgttgttgcttggagacactttatctattgattacca 25862248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 25 - 504
Target Start/End: Complemental strand, 3777897 - 3777421
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    ||||||||||||| |||||||||||||||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||  ||||| |||||||||    
T  3777897 cagattttgaaggtgagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaa 3777798  T
Q  123 acattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--attgagagtgtgggtg 220  Q
    ||||||||||||||||||||||| | ||||||||||||||| |||||||||||||| |||  ||| |||||||||| |||||  |||| ||| |||||||    
T  3777797 acattgtaaacaccttgggtagtgagatttcaccattggaatgatcaaaaagcttccttt--tgtattttctcttaggattcatattgtgagagtgggtg 3777700  T
Q  221 gcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagg 319  Q
     |    |||||||||||||||||  |||||||||| ||| || ||  |||||| ||||||||||||| |||||| |||||||||| |||||||||||||     
T  3777699 ac--acaaaatgggtagaaattagatcttgttcttgtgtaagtttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggaga 3777603  T
Q  320 gctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatcttgttgattt 417  Q
    ||| |||| |       ||| ||||| ||||||||||||| |||||  || |||| | ||||||||| || ||||||| | || ||||||||  || |||    
T  3777602 gctactctct--cctctagattaggttatattggaccgaactgggtcaacaatctcg-gtgtgtttg-ttcctttctttcattgcttatctttgtgcttt 3777507  T
Q  418 gattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    |||||||||||||||  |||| ||||||||| | || | |||||| |||||||||||||||   |||||||||  ||||||||||||    
T  3777506 gattatgcttgtggttttgttctacacttagatctaggtctgttt-ttgttgttgttgcttggagacactttacacattgattacca 3777421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 11 - 433
Target Start/End: Original strand, 6743150 - 6743571
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| |||||||||||| |||||||||||||  |||||||||| ||||||||||||||| || ||| |||||||||||||||| ||||  |    
T  6743150 taagtgttcttgtgcagattttgaagtagagcttgaagagagagaaacttggattacaaaggaggtaacttgaggtttgagtgtctttgtagcgaggatc 6743249  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---a 205  Q
    |||| |||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| |||| |||||||  |||||||||| |||||   |    
T  6743250 tcttgggttgggaaacattgtaaacaccttgggtaatgagatttcaccattggaaggatcaaaaa-cttccttttgtg--ttttctcttaggattcatta 6743346  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
    ||||||||||||||| |    ||||||||||||||||| ||||||||| ||||| ||| | ||||||||||| ||||| ||| |||||| ||||||||||    
T  6743347 ttgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttttgtaagc-tataagctaattttttgtagctcttttgtaacactttcatc 6743443  T
Q  305 ttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggttaccatcttgtgtgtgtttgttttctttcttgc-tttct 403  Q
     |||||||||||||||||||||| |       ||| ||||||||||||||||||| ||||| | ||||||| ||||||||| || ||||||| | |||||    
T  6743444 atagtggattggagggctgctctct--cccgtagattaggtcatattggaccgaactgggtcaacatcttg-gtgtgtttg-ttcctttcttccatttct 6743539  T
Q  404 tatct-tgt-tgatttgattatgcttgtggtg 433  Q
    ||||| | | || |||||||||||||||||||    
T  6743540 tatctctatatgctttgattatgcttgtggtg 6743571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 36314965 - 36315280
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| |||||||||||||||||||||||||||||  ||||||| ||||||||||||||| ||||||||| ||||||||||||| ||||  |    
T  36314965 taagtgttcttgtgcagattttgaaggagagcttgaagagagataaacttggattacaaaggaggtaactttagggtttagtgtctttgtagagaggatc 36315064  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---a 205  Q
    |||| |||||||||||||||||||||| ||||||||| | |||| ||||||||||||||| ||||||||| ||||||||||||  || || |||||   |    
T  36315065 tcttgggttgggaaacattgtaaacacattgggtagtgagatttaaccattggaaggatc-aaaagcttccttttgtgttttt--tcgtaggattcatta 36315161  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
    ||||||||||||||  |   | |||||||||||||||| |||||| |||| ||| ||||| ||||||||||||||||||||| |||||| ||||||||||    
T  36315162 ttgagagtgtgggtaac---acaaatgggtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactc-tttgtaacactttcatc 36315257  T
Q  305 ttagtggattggagggctgctct 327  Q
     ||||||||||||| ||||||||    
T  36315258 atagtggattggagagctgctct 36315280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 36329174 - 36329489
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| |||||||||||||||||||||||||||||  ||||||| ||||||||||||||| ||||||||| ||||||||||||| ||||  |    
T  36329174 taagtgttcttgtgcagattttgaaggagagcttgaagagagataaacttggattacaaaggaggtaactttagggtttagtgtctttgtagagaggatc 36329273  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---a 205  Q
    |||| |||||||||||||||||||||| ||||||||| | |||| ||||||||||||||| ||||||||| ||||||||||||  || || |||||   |    
T  36329274 tcttgggttgggaaacattgtaaacacattgggtagtgagatttaaccattggaaggatc-aaaagcttccttttgtgttttt--tcgtaggattcatta 36329370  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
    ||||||||||||||  |   | |||||||||||||||| |||||| |||| ||| ||||| ||||||||||||||||||||| |||||| ||||||||||    
T  36329371 ttgagagtgtgggtaac---acaaatgggtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactc-tttgtaacactttcatc 36329466  T
Q  305 ttagtggattggagggctgctct 327  Q
     ||||||||||||| ||||||||    
T  36329467 atagtggattggagagctgctct 36329489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 11 - 504
Target Start/End: Original strand, 38152173 - 38152666
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga---aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggta 107  Q
    |||||||| |||| |||||||||||  |||||| |||||||||   || |||| ||||||| ||||||| ||||||||||||||||||||||||||||      
T  38152173 taagtgttcctgtgcagattttgaaa-agagctggaagagagagaaaatttggattacaaatgaggtaactttagggttgagtgtctttgtagtgaggat 38152271  T
Q  108 ctcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--- 204  Q
    ||||| || ||||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||  ||||||  |||||||||| |||||       
T  38152272 ctcttgggatgggaaatattgtaaacaccttgggtagtgacaattcaccattggaaggatc-aaaagcttccatttgtg--ttttctcttaggattcatt 38152368  T
Q  205 attgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcat 303  Q
    |||||||||||||||| |    ||||| ||||||||||| ||||||||||| ||| ||||| |||||||||||||| |||||| |||||| ||||||||     
T  38152369 attgagagtgtgggtgac--acaaaattggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttataactcttttgtaacactttcac 38152466  T
Q  304 cttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-ttt 401  Q
    | ||||||||||||| |||||||| |       ||| || |||||||||||||||| |||||  || |||||| ||||||||| || ||||||| | ||     
T  38152467 catagtggattggagagctgctctct--cccccagattatgtcatattggaccgaactgggtcaacaatcttg-gtgtgtttg-ttcctttctttcattg 38152562  T
Q  402 cttatcttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactg-tttgttgttgttgttgcttaaggacactttattcattgatt 500  Q
    ||||||||  || ||||||||||||||||||| || | ||||||||| | || | ||| ||| |||||||||||||||    |||||| || ||||||||    
T  38152563 cttatctttgtgctttgattatgcttgtggtgttgctatacacttagatctaggtctgttttattgttgttgttgcttggaaacacttcatacattgatt 38152662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 11 - 504
Target Start/End: Complemental strand, 54867541 - 54867053
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||||||||| |||||||||||||||||||  ||||||| ||||||||||||||| |||||||||||||||||||||||||||   |    
T  54867541 taagtgttcttgtgcagattttggaggagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgagaatc 54867442  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattg 208  Q
    |||| ||||||   |  ||||||||||  |||||||| | |||||||||||||||||||||||||||||  |||| ||| |||||||||| ||||||||     
T  54867441 tcttgggttgg---aagttgtaaacactatgggtagtgagatttcaccattggaaggatcaaaaagctttcttttttgtgttttctcttaggattcatt- 54867346  T
Q  209 agagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctta 307  Q
     |||||||| || |    ||||||||||||||||| || |||||||| ||| ||||| |||||||||||||| |||||  |||||| || ||||||| ||    
T  54867345 -gagtgtggatgac--acaaaatgggtagaaattaggtattgttcttgtgtaagcttataagctaatttcttataactattttgtaacattttcatcata 54867249  T
Q  308 gtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttctta 405  Q
    || ||||| ||||||||||| |       ||| ||||||||||||||||||| |||||  || |||||| ||||||||| || ||||||| | || ||||    
T  54867248 gttgattgaagggctgctctct---ccccagactaggtcatattggaccgaactgggtcaacaatcttg-gtgtgtttg-ttcctttctttcattgctta 54867154  T
Q  406 tc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactg-tttgttgttgttgttgcttaaggacactttattcattgattacc 503  Q
    || || ||  ||||||||||||||||||| || | ||||||||| | || | ||| ||| |||||||||||||||   ||||||||||  ||||||||||    
T  54867153 tctttattactttgattatgcttgtggtgttgctctacacttagatctatgtctgtttttttgttgttgttgcttggagacactttatctattgattacc 54867054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 25 - 327
Target Start/End: Original strand, 5396420 - 5396722
Alignment:
Q  25 cagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    ||||||||||||||||||| ||||||  |||||||||| ||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||    
T  5396420 cagattttgaaggagagctggaagagagagaaacttggattacaaaggaggttactttagggttgagtgtctttgtagtgaggatctcttgggttgggaa 5396519  T
Q  123 acattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgat---tcattgagagtgtgggt 219  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||| ||||||||  |||||||| || ||| ||| | |   |||||||||| ||| ||    
T  5396520 acattgtaaacaccttgggtagtgagatttcaccattggaagaatc-aaaagctttcttttgtgtcttctct-ttagggttcatcattgagagagtgagt 5396617  T
Q  220 ggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggag 318  Q
      |   | |||||||||||||||| ||||||||||| ||| |||||  |||||| ||||||||||||| |||| | |||||||||| |||||||||||||    
T  5396618 aac---acaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgcaacactttcatcatagtggattggag 5396713  T
Q  319 ggctgctct 327  Q
     ||||||||    
T  5396714 agctgctct 5396722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 16628607 - 16628787
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||| ||||||||||||||||||||||| |||||||||  || |||| || |||||||||||| ||||||||||||||||||||||||||||  |    
T  16628607 taagtgtttttgttcagattttgaaggagagctagaagagagagaaaattggattgcaaaggaggtaactttagggttgagtgtctttgtagtgaggatc 16628706  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgtttt 190  Q
    |||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| |||||||||||    
T  16628707 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtttt 16628787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 11 - 504
Target Start/End: Complemental strand, 5143622 - 5143130
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaag--agagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||||||||||||||||||||||||  |||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||  |    
T  5143622 taagtgttcttgtgcagattttgaaggagagcttgaagtaagagaaacttggattacagaggaggtaactttagggttgagtgtctttgtagtgaggatc 5143523  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--at 206  Q
    |||| | ||||||||| ||||||||||||| |||||| | |||||||||||||||||||| | ||||||| ||||||||||| ||| ||| | |||  ||    
T  5143522 tcttggattgggaaactttgtaaacaccttaggtagtgagatttcaccattggaaggatc-ataagcttccttttgtgttttctct-ttagggttcatat 5143425  T
Q  207 tgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatct 305  Q
    |  ||| |||| || |    |||||| |||||||||| ||||||||||| |||  ||||  |||||| |||||||||| |  |||||| ||||||||||     
T  5143424 tctgagagtggctgac--acaaaatgagtagaaattaggtcttgttcttgtgtatgcttgcaagctattttcttgtaaattttttgtaacactttcatca 5143327  T
Q  306 tagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggttaccatcttgtgtgtgtttgttttctttcttgc-tttctt 404  Q
    |||||| |||||| |||||||| |       ||| ||||||||||||||||||| | ||| | ||   |  ||||||||| || ||||||| | || |||    
T  5143326 tagtgggttggagagctgctctct--cccccagattaggtcatattggaccgaactaggtcaacaatctcagtgtgtttg-ttcctttctttcattgctt 5143230  T
Q  405 atct-tgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacc 503  Q
    |||| | ||| |||||||||| |||||||| |||| ||||||||| |||| | |||||| |||||||||||| ||   |||||||||  |||||||||||    
T  5143229 atctctattgttttgattatgtttgtggtgttgttctacacttagatttaggtctgttt-ttgttgttgttgtttggagacactttacacattgattacc 5143131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 47 - 504
Target Start/End: Complemental strand, 24334138 - 24333682
Alignment:
Q  47 agagagaaacttggtt-tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaacaccttgggta 143  Q
    ||||||||||||||   ||||||| |||||| |||||||||||| |||||||||||||||| |||||   ||||||||||||||||||||||||||||||    
T  24334138 agagagaaacttgggaatacaaagaaggtaactttagggttgagagtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggta 24334039  T
Q  144 gttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--attgagagtgtgggtggcttgaaaaatgggtagaaat 241  Q
    || | |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||  |||| ||| |||| || |    |||||||||||||||    
T  24334038 gtgagatttcaccattggaaggatcaaaaagcttccttttgtg--ttttctcttaggattcatattgtgagagtggctgac--acaaaatgggtagaaat 24333943  T
Q  242 tatgtcttgttctttgtg--agcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnaga 339  Q
    || || || ||  |||||  ||||| ||||||||||| || |||||| |||||| ||| |||||| ||||||||||||| |||||||| |       | |    
T  24333942 taggttttttttcttgtgtaagcttgtaagctaattttttataactcttttgtaacacgttcatcatagtggattggagagctgctctct--cccccaaa 24333845  T
Q  340 gtaggtcatattggaccgaattgggtt-accatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgcttgtggtgatg 436  Q
     ||||||||||||||||||| || ||| || |||||| ||||||||| |||||||||| | || |||||| || ||| |||||||||||||   ||| ||    
T  24333844 ttaggtcatattggaccgaactgagttaacaatcttg-gtgtgtttg-tttctttctttcattgcttatctttattgctttgattatgctt---gtgttg 24333750  T
Q  437 ttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
     | ||||||||| | || | |||||| |||||||||||| ||   ||||||||||  |||||||||||    
T  24333749 ctctacacttagatctaggtctgttttttgttgttgttgtttggagacactttatctattgattacca 24333682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 7 - 327
Target Start/End: Original strand, 31985365 - 31985685
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgag 104  Q
    ||||||||||||  ||| ||||||||||||  ||||||||||||  |||||||||| |||||||||||| || ||||||||||||||| |||||| ||||    
T  31985365 tatttaagtgttcttgtgcagattttgaagt-gagcttgaagagagagaaacttggattacaaaggagggaactttagggttgagtgtttttgtattgag 31985463  T
Q  105 gtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgatt- 203  Q
    |  ||||| |||||||||||||||||||||||||||||||| | |||||||||| ||||||||| ||||||||| |||||||| || ||| ||| | ||     
T  31985464 gatctcttgggttgggaaacattgtaaacaccttgggtagtgaaatttcaccatgggaaggatc-aaaagcttccttttgtgtcttctcttttagggttc 31985562  T
Q  204 -cattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcacttt 300  Q
     ||||| ||| |||||   |   | |||||||||||||||| | ||||||||| ||| |||||  ||||||  ||||||||||| | |||||| ||||||    
T  31985563 acattgtgagagtgggaaac---acaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaac-cctttgtaacacttt 31985658  T
Q  301 catcttagtggattggagggctgctct 327  Q
    |||| ||||||||||||| ||||||||    
T  31985659 catcatagtggattggagagctgctct 31985685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 11 - 172
Target Start/End: Original strand, 8689231 - 8689394
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaag--agagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||||||||||||||||||||||||  |||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||  |    
T  8689231 taagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaacttggattacaaaggaggtaactttagggtttagtgtctttgtagtgaggatc 8689330  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaa 172  Q
    |||| |||||||||||||| |||||||||||| |||| | ||||||||||||||||||||||||    
T  8689331 tcttgggttgggaaacattttaaacaccttggatagtgagatttcaccattggaaggatcaaaa 8689394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 11 - 326
Target Start/End: Complemental strand, 5148040 - 5147724
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaa--gagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| |||||||||||||||||||||||  ||||||||||||| ||||| ||||||||| ||||||||| |||||||||||||| |||  |    
T  5148040 taagtgttcttgtgcagattttgaaggagagcttgaaatgagagaaacttggattacacaggaggtaactttagggtttagtgtctttgtagtaaggatc 5147941  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--at 206  Q
    ||||  ||||||||||||||||||||| |||| || | | |||||||||||||||||||| | ||||||| ||||||||||| ||| ||| | |||  ||    
T  5147940 tcttgagttgggaaacattgtaaacacattggataatgagatttcaccattggaaggatc-ataagcttccttttgtgttttctct-ttagggttcatat 5147843  T
Q  207 tgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatct 305  Q
    || |||  |||||| |    ||||||||||||||||| | ||||||||| ||| |||||  |||||| ||||||||||||  |||||| ||||||||||     
T  5147842 tgtgagaatgggtgac--acaaaatgggtagaaattaggccttgttcttgtgtaagcttgcaagctattttcttgtaactattttgtaacactttcatca 5147745  T
Q  306 tagtggattggagggctgctc 326  Q
    || |||| ||||| |||||||    
T  5147744 taatggactggagagctgctc 5147724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 275 - 503
Target Start/End: Original strand, 34495822 - 34496048
Alignment:
Q  275 ttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggttaccatctt 374  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| |       |||||| ||||| |||||||||| | ||||||||||||    
T  34495822 ttcttgtaacccatttgtatcactttcatcttagtggattggagggctgctctctccccc--agagtaagtcatgttggaccgaactaggttaccatctt 34495919  T
Q  375 gtgtgtgtttgttttctttcttgcttt-cttatcttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgt 473  Q
    | |||||||||||||||||||| | || ||| | || ||| |||||||||||||||| ||||| |||||||||||||||  |||||||||||||||||||    
T  34495920 g-gtgtgtttgttttctttctttcattgcttgttttattgctttgattatgcttgtgttgatgctttacacttagttttgggactgtttgttgttgttgt 34496018  T
Q  474 tgcttaaggacactttattcattgattacc 503  Q
    ||||| |||  | ||| | |||||||||||    
T  34496019 tgcttgaggctattttgtccattgattacc 34496048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 65 - 318
Target Start/End: Complemental strand, 37782170 - 37781917
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacatt-gtaaacaccttgggtagttacatttcaccattggaa 163  Q
    |||| ||||||| ||||| ||||| | ||||||  | ||||  ||||| |||||| ||||||| |||||||||||||||||| | ||||||  |||||||    
T  37782170 caaatgaggtaactttagagttgaatatctttggtgagaggctctcttgggttggaaaacatttgtaaacaccttgggtagtgagatttcattattggaa 37782071  T
Q  164 ggatcaaaaagcttcattttgtgttttttctcttatgattcattga-gagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagc 262  Q
    | |||||||||  || ||| |||||||  |||||| |||||||| | |||||| |||| |||||||||||||||||||||| |  ||||||||||||||     
T  37782070 gaatcaaaaagtctcttttagtgtttt--ctcttaagattcatttacgagtgtaggtgacttgaaaaatgggtagaaattaagatttgttctttgtgagt 37781973  T
Q  263 ttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggag 318  Q
    ||||||||||||||||||||||   ||||||||||||| ||  |||||||||||||    
T  37781972 ttttaagctaatttcttgtaacctctttgtatcacttttattatagtggattggag 37781917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 3793870 - 3793995
Alignment:
Q  66 aaaggaggtaattttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaa 163  Q
    ||||||||||| ||||||||||||||||||| ||||||||| |||||   |||||| ||||||||||||||||||||||||| | |||||||||| | ||    
T  3793870 aaaggaggtaactttagggttgagtgtctttatagtgaggttctcttgagggttggaaaacattgtaaacaccttgggtagtgagatttcaccatagaaa 3793969  T
Q  164 ggatcaaaaagcttcattttgtgttt 189  Q
    ||||||||||||||| ||||||||||    
T  3793970 ggatcaaaaagcttccttttgtgttt 3793995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 38 - 168
Target Start/End: Original strand, 28468298 - 28468430
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| |||||||||||| || | ||||||| ||||||||||||||||||  ||||| |||||||  ||| |||||||||||    
T  28468298 agagcttagagagagaaacttggattacaaaggagggaactctagggttaagtgtctttgtagtgaggatctcttgggttgggaaaaatattgtaaacac 28468397  T
Q  136 cttgggtagttacatttcaccattggaaggatc 168  Q
    |||||||||| | ||||||||||||||||||||    
T  28468398 cttgggtagtgagatttcaccattggaaggatc 28468430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 6542457 - 6542378
Alignment:
Q  63 tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||||| |||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  6542457 tacaaaggaggtaactttagggttgagtgtctttgtaatgaggttctcttgggttgggaaacattgtaaacaccttgggt 6542378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 189 - 284
Target Start/End: Original strand, 34670578 - 34670673
Alignment:
Q  189 ttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaac 284  Q
    |||||||||| ||||||||| ||||||| ||| |||||||||||| |||||||||||  |||||||||||||||| ||||||||||||||||||||    
T  34670578 ttttctcttaggattcattgtgagtgtgagtgacttgaaaaatggatagaaattatgatttgttctttgtgagctattaagctaatttcttgtaac 34670673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 273 - 504
Target Start/End: Complemental strand, 39246094 - 39245864
Alignment:
Q  273 atttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccat 371  Q
    |||||||||||||| |||||| |||||||||| |||||||||||||||||||||| |       ||| ||||||||||||||||||| |||||  || ||    
T  39246094 atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct--cccccagattaggtcatattggaccgaactgggtcaacaat 39245997  T
Q  372 cttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttg 469  Q
    |||| ||||||||| || ||||||| | || |||||| || ||| ||||||||||| ||||||| || | ||||||||| |||| | |||||| ||||||    
T  39245996 cttg-gtgtgtttg-ttcctttctttcattgcttatctttattgttttgattatgcctgtggtgttgctctacacttagatttaggtctgttttttgttg 39245899  T
Q  470 ttgttgcttaaggacactttattcattgattacca 504  Q
    |||||| ||   ||||||||||  |||||||||||    
T  39245898 ttgttgtttggagacactttatctattgattacca 39245864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 51336939 - 51337035
Alignment:
Q  47 agagagaaactt-ggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||| ||  ||||||||| |||| ||||||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  51336939 agagagaaacttaggaatacaaaggaagtaactttagggttgaatgtctttgtagtgaggttctcttgggttggaaaacattgtaaacaccttgggt 51337035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 48893920 - 48893839
Alignment:
Q  63 tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctt--aggttgggaaacattgtaaacaccttgggt 142  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||   |||| ||||||||||||||||||||||||    
T  48893920 tacaaaggaggtaatttgagggttgagtgtctttgtagtgaggttctctttagggtttggaaacattgtaaacaccttgggt 48893839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 227 - 327
Target Start/End: Original strand, 3796469 - 3796570
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgct 325  Q
    ||||||||||||||||| ||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||| ||| | ||||    
T  3796469 aaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattagagagttgct 3796568  T
Q  326 ct 327  Q
    ||    
T  3796569 ct 3796570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 109 - 327
Target Start/End: Original strand, 873352 - 873569
Alignment:
Q  109 tcttaggttgggaaacatt-gtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcatt 207  Q
    |||| ||||||| |||||| |||||||||||| ||||| | || |||  |  || ||||||||||||||||||||||||||||  |||||| || | | |    
T  873352 tcttgggttggggaacatttgtaaacaccttgagtagtgagatctcattagagggaggatcaaaaagcttcattttgtgtttt--ctcttaagacttaat 873449  T
Q  208 gagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctta 307  Q
    | || |||||||| || |||| ||| |||||||||| |  ||||| |||| ||||||||||| ||||||||||||||  ||| |||||| | | ||| ||    
T  873450 gtgactgtgggtgactcgaaatatgagtagaaattaggatttgttatttgcgagcttttaagttaatttcttgtaacctattggtatcattctaatcata 873549  T
Q  308 gtggattggagggctgctct 327  Q
    |||||| |||| | ||||||    
T  873550 gtggatcggagagttgctct 873569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 246 - 504
Target Start/End: Original strand, 16630649 - 16630906
Alignment:
Q  246 tcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtagg 344  Q
    |||||||||| ||| ||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||||||| |||| ||| |       ||| || |    
T  16630649 tcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgttctct--cctccagattatg 16630746  T
Q  345 tcatattggaccgaattgggttaccatcttgtgtgtgtttgttttctttcttgc-tttcttatcttgttgatttgattatgcttgtggtgatgttttaca 443  Q
    ||||||||||||||| | ||| | || | |  |||||||||||   |||||| | || ||||||||  |  ||||||||||||||||||| || ||||||    
T  16630747 tcatattggaccgaactaggtcaacaaccttggtgtgtttgttccttttctttcattgcttatctttgttctttgattatgcttgtggtgttgctttaca 16630846  T
Q  444 cttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    ||||| | || |  ||||| ||||||||| |||||   |||||||||  ||||||||||||    
T  16630847 cttagatctaggtttgttt-ttgttgttgctgcttggagacactttacacattgattacca 16630906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 142
Target Start/End: Original strand, 4587820 - 4587929
Alignment:
Q  35 aggagagcttgaagagagaaactt-ggtttacaaaggaggtaattttagggttgagtgtcttt-gtagtgaggtactcttaggttgggaaacattgtaaa 132  Q
    |||||||||| ||||||||||| | ||  |||||| ||| ||| ||||||||| ||||||||| |||||||||| ||| | |||||||||||||||||||    
T  4587820 aggagagcttcaagagagaaacctaggaatacaaatgagataactttagggttaagtgtcttttgtagtgaggttctcatgggttgggaaacattgtaaa 4587919  T
Q  133 caccttgggt 142  Q
    ||||||||||    
T  4587920 caccttgggt 4587929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 9927773 - 9927656
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||||| |||||||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | | | || ||||| ||||||||    
T  9927773 cagattttgaaggagggcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg-attaaagttctcttgggttggga 9927675  T
Q  122 aacattgtaaacaccttgg 140  Q
    |||||||||||||||||||    
T  9927674 aacattgtaaacaccttgg 9927656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 26175952 - 26175833
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    |||||||||||||||||||||||||||||  |||||||   | |||||||||||| ||||| |||||| ||||||| | | | || || || ||||||||    
T  26175952 cagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagagttgagggtctttg-attaaagttctgttgggttggga 26175854  T
Q  122 aacattgtaaacaccttgggt 142  Q
    |||||||||||||||||||||    
T  26175853 aacattgtaaacaccttgggt 26175833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 31474164 - 31474239
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |||||||||||| |||| || |  ||||||||||||||||||||||||||||| ||||    
T  31474164 aaaatgggtagaaattaggtcttgttctttttgagtttgttgaagctaatttcttgtaactcatttgtatctcttt 31474239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 37740478 - 37740595
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    |||||||||||||||||| ||||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | |   || ||||| ||||||||    
T  37740478 cagattttgaaggagagcatgaagagagagaaacttgggaaatcaaaggaggtaagtttagggttgagggtctttg-attagagttctcttgggttggga 37740576  T
Q  122 aacattgtaaacaccttgg 140  Q
    |||||||||||||||||||    
T  37740577 aacattgtaaacaccttgg 37740595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 5871832 - 5871908
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| || |||||||||||||||||  |||||| ||||||||||||| ||||| |||||||||    
T  5871832 gaaaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagcaaatttcttgtaacccatttttatcacttt 5871908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 24742280 - 24742171
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| |||||||||||| ||    |||||||||||||||||||| |||   ||||| |||||||  ||||||||||| |||    
T  24742280 agagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcac 24742181  T
Q  136 cttgggtagt 145  Q
    ||||||||||    
T  24742180 cttgggtagt 24742171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 24969124 - 24969200
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||||||||||||||||  | ||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  24969124 gaaaaatgggtagaaattagat-ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 24969200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 142
Target Start/End: Complemental strand, 52082970 - 52082854
Alignment:
Q  28 attttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaac 124  Q
    ||||||||||| ||||||||||||||  |||||||   | |||||||||||| |||||||||||| |||||||    ||| | ||||| |||||||||||    
T  52082970 attttgaaggacagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagtt-ctcttgggttgggaaac 52082872  T
Q  125 attgtaaacaccttgggt 142  Q
    ||||||||||||||||||    
T  52082871 attgtaaacaccttgggt 52082854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 318
Target Start/End: Original strand, 18912276 - 18912405
Alignment:
Q  189 ttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcat 288  Q
    |||||||||| ||||||||| | || || ||| |||||||||||| || || ||| |  |||||||||||||| || ||| ||||||||||||| |   |    
T  18912276 ttttctcttaggattcattgtgggtttgagtgacttgaaaaatggatataatttagggtttgttctttgtgagtttgtaaactaatttcttgtatccttt 18912375  T
Q  289 ttgtatcactttcatcttagtggattggag 318  Q
    |||||||||| | ||| |||||||||||||    
T  18912376 ttgtatcactcttatcatagtggattggag 18912405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 379394 - 379468
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| || ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  379394 aaaatgggtagaaattaggt-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcgcttt 379468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 12073406 - 12073480
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| || ||||||||||||||||| |  |||||||||| |||||||||||||||||| ||||    
T  12073406 aaaatgggtagaaattaggt-ttgttctttgtgagcttgttgaagctaatttattgtaactcatttgtatctcttt 12073480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 190 - 298
Target Start/End: Complemental strand, 39593910 - 39593803
Alignment:
Q  190 tttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatt 289  Q
    ||||||||| ||||||||| | || || ||| ||||| ||| |||||||||||| || |  ||||||||||| || ||| |||||||||||||||| |||    
T  39593910 tttctcttaggattcattgtgggtttgagtgacttgacaaaggggtagaaattaggt-tgattctttgtgagtttgtaaactaatttcttgtaacttatt 39593812  T
Q  290 tgtatcact 298  Q
    |||||||||    
T  39593811 tgtatcact 39593803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 52095677 - 52095559
Alignment:
Q  26 agattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    ||||||||||||| ||||||||||||||  |||||||   | |||||||||||| |||||||||||| | |||||    ||| | ||||| |||||||||    
T  52095677 agattttgaaggacagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggactttgattagagtt-ctcttgggttgggaa 52095579  T
Q  123 acattgtaaacaccttgggt 142  Q
    ||||||||||||||||||||    
T  52095578 acattgtaaacaccttgggt 52095559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 52467508 - 52467434
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| || ||||||||||||||||| |  |||||||| ||||||||| |||||||||||||||    
T  52467508 aaaatgggtagaaattaggt-ttgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatcacttt 52467434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 5429537 - 5429650
Alignment:
Q  31 ttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacatt 127  Q
    |||||||||||||||||||||||  |||||||   | ||||||| |||| |||||||||||| |||||||    ||| | ||||| ||||||||||||||    
T  5429537 ttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaagtaactttagggttgagggtctttgattagagtt-ctcttgggttgggaaacatt 5429635  T
Q  128 gtaaacaccttgggt 142  Q
    |||||||||||||||    
T  5429636 gtaaacaccttgggt 5429650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 45687337 - 45687267
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatc 295  Q
    |||||||| |||||||| || ||||||||||||||||| |  ||||||||||||| |||||||||||||||    
T  45687337 aaaatgggaagaaattaggttttgttctttgtgagcttgtcaaagctaatttcttataactcatttgtatc 45687267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 56178952 - 56178835
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||| |||||||||||||||||  |||||||   | |||||||||||| |||||||||||  |||||||    ||| | ||||| ||||||||    
T  56178952 cagattttgaaagagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaaggtctttgattagagtt-ctcttgggttggga 56178854  T
Q  122 aacattgtaaacaccttgg 140  Q
    |||||||||||||||||||    
T  56178853 aacattgtaaacaccttgg 56178835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 46147547 - 46147471
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| |  |||||| |||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  46147547 gaaaaatgggtagaaattaggg-ttgttcattgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 46147471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 52467628 - 52467551
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaaca-ttgtaaacaccttgggt 142  Q
    ||||||||||||||||||||||||| ||||||| | |  ||| ||||| |||||||||||| |||||||||||||||||    
T  52467628 caaaggaggtaattttagggttgagggtctttg-attagggttctcttgggttgggaaacatttgtaaacaccttgggt 52467551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 226 - 300
Target Start/End: Original strand, 6655969 - 6656044
Alignment:
Q  226 aaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||||||||||||||| |  ||||||||||||| ||| |  ||||||||||||||||||||||||||||| ||||    
T  6655969 aaaaatgggtagaaattaagg-ttgttctttgtgaacttgttgaagctaatttcttgtaactcatttgtatctcttt 6656044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 48142937 - 48143013
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||| |||||||||||| |||||||    ||| | ||||| |||||||||||||||||||||||||||||    
T  48142937 caaaggaggtaactttagggttgagggtctttgattagagtt-ctcttgggttgggaaacattgtaaacaccttgggt 48143013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 474
Target Start/End: Original strand, 873637 - 873713
Alignment:
Q  399 tttcttatctt-gttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgtt 474  Q
    ||||||||||| |||| ||||| |||| |||||||| ||||| |||||||| |||||| | ||||||||||||||||    
T  873637 tttcttatcttcgttgttttgaatatgtttgtggtgttgtttcacacttagatttaagtcagtttgttgttgttgtt 873713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 6677362 - 6677438
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaaca-ttgtaaacaccttgg 140  Q
    |||||||||||| |||||||||||||||||||||   | ||| ||||| |||||||||||| |||||||||| ||||    
T  6677362 caaaggaggtaactttagggttgagtgtctttgttcaggggttctcttgggttgggaaacatttgtaaacacattgg 6677438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 26364250 - 26364324
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  ||||||||||||||||||||||||||||| ||||    
T  26364250 aaaatgggtagaaattaggg-ttgttctttgtgaacttgttgaagctaatttcttgtaactcatttgtatctcttt 26364324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 145
Target Start/End: Complemental strand, 29760969 - 29760871
Alignment:
Q  50 gagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg---aaacattgtaaacaccttgggtagt 145  Q
    ||||||||||| |||||||||||| ||    |||||||||||||||||||| |||   ||||| |||||||   ||||||||||| |||||||||||||    
T  29760969 gagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaaacattgtaatcaccttgggtagt 29760871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 36994538 - 36994612
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  36994538 aaaatgggtagaaattaagg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcccttt 36994612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 295
Target Start/End: Original strand, 41639440 - 41639509
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatc 295  Q
    ||||||||||||||||| |  ||||||||||||| |||||  |||||||||||||||||| ||||||||||    
T  41639440 aaaatgggtagaaattaggg-ttgttctttgtgaactttttgaagctaatttcttgtaacccatttgtatc 41639509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 12119550 - 12119627
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||| | ||||||||||||  ||||||||||||| |||||  |||||||||||||||||| | |||||||| ||||    
T  12119550 gaaaaaagagtagaaattatggtttgttctttgtgaactttttgaagctaatttcttgtaacccttttgtatctcttt 12119627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 225 - 295
Target Start/End: Original strand, 21688261 - 21688332
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatc 295  Q
    ||||||||||||||||||| |  ||||||||||||||||| |  || ||||||| ||||||||||||||||||    
T  21688261 gaaaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaaactaattttttgtaactcatttgtatc 21688332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 34570730 - 34570611
Alignment:
Q  25 cagattttgaaggagagcttgaa--gagagaaacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||||||||| |||  |||||||||||||   | |||||||||||  |||||||||||| ||||||| | |   || ||||| ||||||||    
T  34570730 cagattttgaaggagagctggaacagagagaaacttgggaaatcaaaggaggtagctttagggttgagggtctttg-attagagttctcttgggttggga 34570632  T
Q  122 aacattgtaaacaccttgggt 142  Q
    ||||||| ||||| |||||||    
T  34570631 aacattgaaaacatcttgggt 34570611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 226 - 300
Target Start/End: Original strand, 35662454 - 35662529
Alignment:
Q  226 aaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||||||||||||||| |  ||||||||| |||| || |  ||||||||||||||||||||||||||||| ||||    
T  35662454 aaaaatgggtagaaattaggg-ttgttctttatgagtttgttgaagctaatttcttgtaactcatttgtatctcttt 35662529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 8665422 - 8665496
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||||||| |||||| |  |||||||||||||||||| |||||||||| ||||    
T  8665422 aaaatgggtagaaattaggg-ttgttctttgagagcttgttgaagctaatttcttgtaacccatttgtatctcttt 8665496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 9927612 - 9927538
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  9927612 aaaatgggtagaaattaggg-ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt 9927538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 24968945 - 24969083
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaagagag--aaacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtga 103  Q
    ||||||||||||||||||||||||||  | |||| ||| |||||||  ||||||||   | |||||||||||| |||| ||||||  ||||||| | |      
T  24968945 tatttaagtgtttctgttcagattttttatgagaacttcaagagagaaaaacttgggaaatcaaaggaggtaactttaaggttgacggtctttg-attag 24969043  T
Q  104 ggtactcttaggttgggaaaca-ttgtaaacaccttgggt 142  Q
     || ||||| |||||||||||| |||||||||||||||||    
T  24969044 agttctcttgggttgggaaacatttgtaaacaccttgggt 24969083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 27417119 - 27417045
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||| |||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  27417119 aaaatgtgtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 27417045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 40632459 - 40632533
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  ||||||||||||||||||  ||||||||| ||||    
T  40632459 aaaatgggtagaaatta-gagttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctcttt 40632533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 41639277 - 41639351
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||| | |||||  |||||||||||||||||| |||||||||| ||||    
T  41639277 aaaatgggtagaaattaggg-ttgttctttgtaaactttttgaagctaatttcttgtaacccatttgtatctcttt 41639351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 52095516 - 52095442
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  52095516 aaaatgggtagaaattaggg-ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctcttt 52095442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 54200060 - 54199986
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  54200060 aaaatgggtagaaattaggg-ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt 54199986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 54883034 - 54883108
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||| ||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  54883034 aaaatgggtagaaattaggg-ttgttttttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 54883108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 26699577 - 26699523
Alignment:
Q  248 ttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||||||||||||||||| |||||||| ||||    
T  26699577 ttgttctttgtgagcttgttgaagctaatttcttgtaactcttttgtatctcttt 26699523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 30000121 - 30000004
Alignment:
Q  25 cagattttgaaggagagcttgaaga--gagaaacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    |||||||||||||||||||||||||  |||||||||||   | ||||||||  || ||||||||| || ||||||| | |   || ||||| |||| |||    
T  30000121 cagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggagacaactttagggtttagggtctttg-attagagttctcttgggtttgga 30000023  T
Q  122 aacattgtaaacaccttgg 140  Q
    |||||||||||||||||||    
T  30000022 aacattgtaaacaccttgg 30000004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 47038564 - 47038496
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatc 295  Q
    ||||||||||||||||| |  ||||||||||||||||| |  ||||||||||||||||| |||||||||||    
T  47038564 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaa-tcatttgtatc 47038496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 50262835 - 50262781
Alignment:
Q  248 ttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  50262835 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 50262781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 300
Target Start/End: Complemental strand, 50673977 - 50673927
Alignment:
Q  252 tctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  50673977 tctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 50673927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 142
Target Start/End: Original strand, 5871757 - 5871791
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||| |||||||||||||||||||||||||||||    
T  5871757 ctcttgggttgggaaacattgtaaacaccttgggt 5871791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 13009662 - 13009628
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||| |||||||||||||||||||||||||||||    
T  13009662 ctcttgggttgggaaacattgtaaacaccttgggt 13009628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 41964429 - 41964493
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcattt 290  Q
    ||||||||||||||||| |  |||||||||||||||||  |||||||||||| ||||||| |||||    
T  41964429 aaaatgggtagaaattaggg-ttgttctttgtgagcttgtttaagctaatttattgtaacccattt 41964493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 45687414 - 45687380
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||| |||||||||||||||||||||||||||||    
T  45687414 ctcttgggttgggaaacattgtaaacaccttgggt 45687380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 46703514 - 46703578
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcattt 290  Q
    |||||| |||||||||| |  |||||||||||||||||  |||||||||||||||||||| |||||    
T  46703514 aaaatgagtagaaattaggg-ttgttctttgtgagcttgtttaagctaatttcttgtaacccattt 46703578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 300
Target Start/End: Original strand, 5349923 - 5349998
Alignment:
Q  226 aaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||||||||||||||| || ||||||||||||| ||| |  ||||||||| |||||| ||| |||||||| ||||    
T  5349923 aaaaatgggtagaaattaggt-ttgttctttgtgaacttgtcgaagctaattccttgtagctcgtttgtatctcttt 5349998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 318
Target Start/End: Original strand, 8114679 - 8114779
Alignment:
Q  217 ggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattgg 316  Q
    |||| |||||||||||| || |||||| |  |||||||||||||| || |||| | ||||||||||||  |||| ||||| | | ||| |||||||||||    
T  8114679 ggtgacttgaaaaatggatacaaattagggtttgttctttgtgagattataag-tgatttcttgtaacctatttatatcattcttatcatagtggattgg 8114777  T
Q  317 ag 318  Q
    ||    
T  8114778 ag 8114779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 13992620 - 13992484
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtga 103  Q
    ||||||||||||  ||| ||||||| || ||||||||||||||||||  |||||||   | ||||||  | || ||||||||| || |||||||    ||    
T  13992620 tatttaagtgttcttgtgcagatttggagggagagcttgaagagagagaaacttgggaaatcaaaggtagcaactttagggtttagggtctttgattaga 13992521  T
Q  104 ggtactcttaggttgggaaacattgtaaacaccttgg 140  Q
    |   ||||| |||||||||||||||||||||||||||    
T  13992520 gtctctcttgggttgggaaacattgtaaacaccttgg 13992484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 29254389 - 29254465
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||| ||| |||||||||||  ||||||| |||   || ||||| |||||||||||||||||||||| ||||||    
T  29254389 caaaggagataactttagggttgaaggtctttg-agtagagttctcttgggttgggaaacattgtaaacacattgggt 29254465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 300
Target Start/End: Complemental strand, 48893751 - 48893718
Alignment:
Q  267 aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||||||||||||| ||||    
T  48893751 aagctaatttcttgtaactcatttgtatctcttt 48893718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 52093977 - 52093905
Alignment:
Q  28 attttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttg 97  Q
    ||||||||||| ||||||||||||||  |||||||   | |||||||||||| |||||||||||| |||||||    
T  52093977 attttgaaggacagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg 52093905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 6375970 - 6376002
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttg 97  Q
    ||||||||||||||||||||||||| |||||||    
T  6375970 caaaggaggtaattttagggttgagggtctttg 6376002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 12744079 - 12744005
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||| ||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  12744079 aaaataggtagaaattaggg-ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctcttt 12744005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 12745468 - 12745394
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||| ||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  12745468 aaaataggtagaaattaggg-ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctcttt 12745394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 12745590 - 12745516
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  || ||||||||||||||| |||||||||| ||||    
T  12745590 aaaatgggtagaaattaggg-ttgttctttgtgaacttgtcaaaactaatttcttgtaacccatttgtatctcttt 12745516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 26175790 - 26175716
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||||| |||||||| |  ||||||||||||||||| |  || ||||||||||||||| |||||||||| ||||    
T  26175790 aaaatggggagaaattaggg-ttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctcttt 26175716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 36463543 - 36463469
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||| ||||||||| | || |||| |||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  36463543 aaaatggatagaaattagggct-gttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 36463469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 36463626 - 36463586
Alignment:
Q  102 gaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||| |||||  ||||||||||||||||||||||||||||    
T  36463626 gaggttctcttgagttgggaaacattgtaaacaccttgggt 36463586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 300
Target Start/End: Original strand, 51337100 - 51337152
Alignment:
Q  248 ttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||||||||||||||||||| |||||| || |||| | |||||||| ||||    
T  51337100 ttgttctttgtgagcttttaagataatttattataacccttttgtatctcttt 51337152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 55085519 - 55085445
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||| ||||||||||| |  ||||||||||||||||| |  |||||||||||||||||  |||||||||| ||||    
T  55085519 aaaataggtagaaattaagg-ttgttctttgtgagcttgttgaagctaatttcttgtaaaccatttgtatctcttt 55085445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 11 - 429
Target Start/End: Original strand, 24435707 - 24436122
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||| | | || ||||||||| | ||||||||||||||  |||| || ||||||||||| ||| ||||||||||||||||||||| ||||||| |    
T  24435707 taagtgtttgtttgcaaattttgaagaatagcttgaagagagagaaactaggattacaaaggagataactttagggttgagtgtctttgt-gtgaggttc 24435805  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattg 208  Q
    ||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||||     
T  24435806 tcttgagttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtg--ttttctcttaggattcatta 24435903  T
Q  209 agagtgtgggtggcttgaaaaatgggtagaaattatgtcttg-ttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctta 307  Q
     || ||||||| | |  |||||||||||||||||| |||||| || ||||| ||||| |||||||||||||||||| ||||||||| || ||||||| ||    
T  24435904 tgaatgtgggt-gatataaaaatgggtagaaattaggtcttgtttttttgtaagcttataagctaatttcttgtaattcatttgtaacattttcatccta 24436002  T
Q  308 gtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggttaccatcttgtgtgtgtttgttttctttcttgctttcttatc 407  Q
    |||||| ||||||||||||| |       |||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  24436003 gtggatcggagggctgctctct--cccctagagtaggtcatattggatcgaactgggttaccatcttg-gtgtgtttgttttctttcttgctttcttatc 24436099  T
Q  408 -ttgttgatttgattatgcttgt 429  Q
     |||||| |||| ||||||||||    
T  24436100 tttgttgctttgtttatgcttgt 24436122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 47 - 504
Target Start/End: Complemental strand, 31979836 - 31979384
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagtt 146  Q
    ||||||||||||||  | |||||||||||| ||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||||||     
T  31979836 agagagaaacttggactgcaaaggaggtaactttagggttgagtgtctttgtagtgaggttcttttgggttgagaaacattgtaaacaccttgggtagtg 31979737  T
Q  147 acatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgt 246  Q
    | |||||||||||||||||||| ||||||||| |||||||  |||||||||| ||||||||||||||||||||| |   |||||||||||||||||| ||    
T  31979736 agatttcaccattggaaggatc-aaaagcttccttttgtg--ttttctcttaggattcattgagagtgtgggtgac-acaaaaatgggtagaaattaggt 31979641  T
Q  247 cttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggt 345  Q
    ||||||| ||||| ||||| |||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||||||| |       ||| || ||    
T  31979640 cttgttcttttgtaagcttataagttaatttcttgtaactcttttgcaacactttcatcttagtggattggagggctgctctct--cccccagattatgt 31979543  T
Q  346 catattggaccgaattgggt-taccatcttgtgtgtgtttgtt-ttctttcttgctttcttatc-ttgttgatttgattatgcttgtggtgatgttttac 442  Q
    |||||||||||||| |||||  || |||||| |||||||||||  ||| | ||  || |||||| || ||| |||||||||||||||| || || | |||    
T  31979542 catattggaccgaactgggtcaacaatcttg-gtgtgtttgttcctctat-ttcattgcttatctttattgctttgattatgcttgtgatgttgctctac 31979445  T
Q  443 acttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    |||||| |||| | |||||| ||||||||||||||| | ||||||||||  |||||||||||    
T  31979444 acttagatttaggtctgttt-ttgttgttgttgcttgaagacactttatctattgattacca 31979384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 29 - 365
Target Start/End: Original strand, 5571997 - 5572328
Alignment:
Q  29 ttttgaaggagagcttga-agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacatt 127  Q
    |||||||||||||||| | |||||||||||||| |||||| |||||||| |||||||||| |||||||||||||| ||  ||||| ||||||||||||||    
T  5571997 ttttgaaggagagctttagagagagaaacttggattacaatggaggtaactttagggttgggtgtctttgtagtggggatctcttgggttgggaaacatt 5572096  T
Q  128 gtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaa 227  Q
    |||||||||||||||||| | ||||||| ||||||| |||| ||||||||| |||||||  |||||||||| ||||||||||||||||||||| |    |    
T  5572097 gtaaacaccttgggtagtgagatttcactattggaatgatc-aaaagcttccttttgtg--ttttctcttaggattcattgagagtgtgggtgac--aca 5572191  T
Q  228 aaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctc 326  Q
    ||||| |||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  5572192 aaatgcgtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 5572291  T
Q  327 tttnnnnnnnagagtaggtcatattggaccgaattgggt 365  Q
    | |       ||| |||||||||||||||||||||||||    
T  5572292 tct--cccctagattaggtcatattggaccgaattgggt 5572328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 31086209 - 31086524
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||||||||||||| ||||| ||||||  |||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||  |    
T  31086209 taagtgttcttgtgcagattttgaaggtgagctggaagagagagaaacttggattacaaagggggtaactttagggttgagtgtctttgtagtgaggatc 31086308  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcatt- 207  Q
    |||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||| ||||||||| |||| ||  |||||||||| ||||||||     
T  31086309 tcttaggttgagaaacattgtaaacaccttgggttgtgagatttcaccattggaaggatc-aaaagcttctttttatg--ttttctcttaggattcatta 31086405  T
Q  208 gagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctt 306  Q
      ||||||||||| |    ||||||||||||||||| |||||| |||| ||| ||||| ||||||||||||||||||||| |||||| |||||||||| |    
T  31086406 ttgagtgtgggtgac--acaaaatgggtagaaattaggtcttgctcttgtgtaagcttataagctaatttcttgtaactcctttgtaacactttcatcat 31086503  T
Q  307 agtggattggagggctgctct 327  Q
    |||||||||||| | ||||||    
T  31086504 agtggattggagagttgctct 31086524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 25 - 504
Target Start/End: Complemental strand, 22964047 - 22963570
Alignment:
Q  25 cagattttgaaggagagcttgaa--gagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    |||||||||||  ||||||||||  ||||||||||| | ||||||| ||| ||| |||||||||||||||||||||||||| |  ||||| | |||||||    
T  22964047 cagattttgaactagagcttgaaaagagagaaactttgattacaaaagagctaactttagggttgagtgtctttgtagtgaagatctcttggattgggaa 22963948  T
Q  123 acattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---attgagagtgtgggt 219  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||  |||  ||||||  |||||| ||| |||||   |||||||||||| ||    
T  22963947 acattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaa-tttccctttgtg--ttttcttttaggattcattattgagagtgtgagt 22963851  T
Q  220 ggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagg 319  Q
    | |   |||||||||||||||||| | |||||| | ||| || || ||||||||||||||||||||| |||||| |||||||||| ||||||||||||||    
T  22963850 gac--aaaaaatgggtagaaattacggcttgttttgtgtaaggttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagg 22963753  T
Q  320 gctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatct-tgttgatt 416  Q
    |||||||| |       ||| | |||||||||| |||||| |||||  || |||||| ||||||||| || ||||||| | |  ||||||| | ||| ||    
T  22963752 gctgctctct---ccccagatttggtcatattgcaccgaactgggtcaacaatcttg-gtgtgtttg-ttcctttctttcatagcttatctctattgctt 22963658  T
Q  417 tgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    ||||||||||||||||| || | ||||||||| | || | |||||| |||||||||||||||   ||||||||||| |||||||||||    
T  22963657 tgattatgcttgtggtgttgctctacacttagatctaggtctgttttttgttgttgttgcttggagacactttattaattgattacca 22963570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 25 - 504
Target Start/End: Original strand, 23824346 - 23824823
Alignment:
Q  25 cagattttgaaggagagcttgaa--gagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    |||||||||||  ||||||||||  ||||||||||| | ||||||| ||| ||| |||||||||||||||||||||||||| |  ||||| | |||||||    
T  23824346 cagattttgaactagagcttgaaaagagagaaactttgattacaaaagagctaactttagggttgagtgtctttgtagtgaagatctcttggattgggaa 23824445  T
Q  123 acattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---attgagagtgtgggt 219  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||  |||  ||||||  |||||| ||| |||||   |||||||||||| ||    
T  23824446 acattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaa-tttccctttgtg--ttttcttttaggattcattattgagagtgtgagt 23824542  T
Q  220 ggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagg 319  Q
    | |   |||||||||||||||||| | |||||| | ||| || || ||||||||||||||||||||| |||||| |||||||||| ||||||||||||||    
T  23824543 gac--aaaaaatgggtagaaattacggcttgttttgtgtaaggttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagg 23824640  T
Q  320 gctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatct-tgttgatt 416  Q
    |||||||| |       ||| | |||||||||| |||||| |||||  || |||||| ||||||||| || ||||||| | |  ||||||| | ||| ||    
T  23824641 gctgctctct---ccccagatttggtcatattgcaccgaactgggtcaacaatcttg-gtgtgtttg-ttcctttctttcatagcttatctctattgctt 23824735  T
Q  417 tgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    ||||||||||||||||| || | ||||||||| | || | |||||| |||||||||||||||   ||||||||||| |||||||||||    
T  23824736 tgattatgcttgtggtgttgctctacacttagatctaggtctgttttttgttgttgttgcttggagacactttattaattgattacca 23824823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 47 - 326
Target Start/End: Original strand, 21801114 - 21801394
Alignment:
Q  47 agagagaaacttg-gtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaacaccttgggta 143  Q
    ||||||||||||| |  ||||||| |||||| || |||||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||||||    
T  21801114 agagagaaacttgagaatacaaagcaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggta 21801213  T
Q  144 gttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattca-ttgagagtgtgggtggcttgaaaaatgggtagaaatt 242  Q
    || | |||||| ||||||||||||||||||||||| |||||||  |||||||||| | |||| ||||||||||||||| |    ||||||||||||||||    
T  21801214 gtgagatttcaacattggaaggatcaaaaagcttccttttgtg--ttttctcttagggttcatttgagagtgtgggtgac--acaaaatgggtagaaatt 21801309  T
Q  243 atgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctc 326  Q
    | ||||||||| ||||| ||||| |||| |||||||||||||||| |||||| |||||| ||||||||||||||||| |||||||    
T  21801310 aagtcttgttcttttgtaagcttataagataatttcttgtaactcttttgtaacacttttatcttagtggattggagagctgctc 21801394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 11 - 284
Target Start/End: Complemental strand, 31936937 - 31936665
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagag--cttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||||| | |||||||||||| ||||   ||  |||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||  |    
T  31936937 taagtgtttctttgcagattttgaagtagaggttttagagagagaaacttggattgcaaaggaggtaactttagggttgagtgtctttgtagtgaggatc 31936838  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattg 208  Q
    | || |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||  ||||||  |||||||||| |||||||||    
T  31936837 tattgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttc--tttgtg--ttttctcttaggattcattg 31936742  T
Q  209 agagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaac 284  Q
    ||||||||||||   |||||||||||||||||||| |  |||||||| ||| |||||  |||||| |||||||||||    
T  31936741 agagtgtgggtgatatgaaaaatgggtagaaattaggatttgttcttgtgtaagcttgcaagctattttcttgtaac 31936665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 133 - 504
Target Start/End: Original strand, 10077027 - 10077391
Alignment:
Q  133 caccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatg 232  Q
    ||||||||||||| | |||| ||||||||||||||||||||||||| ||||||||||| |||  || |||||||||||  |||||||| |    ||||||    
T  10077027 caccttgggtagtgagatttgaccattggaaggatcaaaaagcttccttttgtgttttatct--taggattcattgag--tgtgggtgacac--aaaatg 10077120  T
Q  233 ggtagaaattatgtcttgttcttt-gtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnn 331  Q
    ||||||||||| |||||||||||| || ||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||||||||||||||| |      
T  10077121 ggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaacttttttgtaacactttcatcatagtggattggagggctgctctct-- 10077218  T
Q  332 nnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgcttg 428  Q
         ||| |||||||||||||||||||||||||  || |||||| ||||||||| || ||||||| | || |||||| || ||| ||||||||||||||    
T  10077219 cccccagattaggtcatattggaccgaattgggtcaacaatcttg-gtgtgtttg-ttcctttctttcattgcttatctttattgctttgattatgcttg 10077316  T
Q  429 tggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    ||||| || | ||||||||| |||| | |||||| |||||||||||||||   ||||||||||  |||||||||||    
T  10077317 tggtgttgctctacacttagatttaggtctgttt-ttgttgttgttgcttggagacactttatctattgattacca 10077391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 63 - 359
Target Start/End: Complemental strand, 14521984 - 14521690
Alignment:
Q  63 tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaacaccttgggtagttaca-tttcaccatt 159  Q
    |||||| ||||||| ||||||||| | |||||||||||| |||| |||||   |||||||||||||||||||||||||||||||| | | ||||||||||    
T  14521984 tacaaatgaggtaactttagggtttaatgtctttgtagttaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagaatttcaccatt 14521885  T
Q  160 ggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtg 259  Q
    |||||||| ||||| |||| |||  ||||||  |||||| |||| |||||||||||||||| | ||||||||| |||||||||| ||  |||||||||||    
T  14521884 ggaaggataaaaaatcttcctttaatgtttt--ctcttaggatttattgagagtgtgggtgacatgaaaaatgtgtagaaattaggttgtgttctttgtg 14521787  T
Q  260 agcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaa 359  Q
    |||| ||  |||||||| |||||||||||||||||||||||||||||| || ||||||| | |||||| |       |||||||||||||||||||||||    
T  14521786 agctcttgtgctaattt-ttgtaactcatttgtatcactttcatcttattgaattggagaggtgctctct--cctcgagagtaggtcatattggaccgaa 14521690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 5757213 - 5757529
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||| ||| ||||||||| ||||||||| ||||||  |||||||||| ||||||||||||||| |||||||||||||||||||||| | |||  |    
T  5757213 taagtgtttttgtgcagattttggaggagagctggaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtatttaggatc 5757312  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcatt- 207  Q
    |||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| ||  |||| || ||| ||| | ||||||     
T  5757313 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttccgtgtcttctct-ttagggttcatta 5757410  T
Q  208 gagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctt 306  Q
      ||| | | ||||    | |||||||||||||||| ||||||||||| | | |||||  |||||| ||||||||||||| |||||| |||||||||| |    
T  5757411 ttgagagagagtgg-aacacaaatgggtagaaattaggtcttgttcttgtataagcttgcaagctattttcttgtaactc-tttgtaacactttcatcat 5757508  T
Q  307 agtggattggagggctgctct 327  Q
    |||||||||||| ||||||||    
T  5757509 agtggattggagagctgctct 5757529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 116 - 504
Target Start/End: Complemental strand, 18233101 - 18232716
Alignment:
Q  116 ttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---attgagag 212  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| |||||||  |||||||||| |||||   ||||||||    
T  18233101 ttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtg--ttttctcttaggattcattattgagag 18233005  T
Q  213 tgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtgg 311  Q
    |||||||| |    ||||||||||||||||| ||||||||||| ||| ||||| |||||| |||||||||||||| |||||| |||||||||| |||||     
T  18233004 tgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctgatttcttgtaactcttttgtaacactttcatcatagtga 18232907  T
Q  312 attggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-t 408  Q
    ||||||||| |||||| |       ||| |||||||||||||||||| ||| ||  || |||||| ||||||||| || || |||| | |  |||||| |    
T  18232906 attggagggttgctctct--cccccagattaggtcatattggaccgatttgagtcaacaatcttg-gtgtgtttg-ttcctctctttcatcgcttatctt 18232811  T
Q  409 tgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    | ||| ||||||||||||||||||| || | ||||||||| | || |  ||||| |||||||||||||||   ||||||||||  |||||||||||    
T  18232810 tattgctttgattatgcttgtggtgttgctctacacttagatctaggtttgttt-ttgttgttgttgcttggagacactttatctattgattacca 18232716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 63 - 325
Target Start/End: Original strand, 31076725 - 31076990
Alignment:
Q  63 tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattgga 162  Q
    |||||||||| ||| | |||||||||||||||||||||||| ||   ||| ||||| ||||| ||||||||||||| |||| | | ||||||||||||||    
T  31076725 tacaaaggagataactatagggttgagtgtctttgtagtgacgttgccttgggttgagaaactttgtaaacaccttaggtattgagatttcaccattgga 31076824  T
Q  163 aggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttg-----aaaaatgggtagaaattatgtcttgttctttg 257  Q
    | |||||||||  ||  ||| |||  |||||||||| ||||||| | || |||||||| ||||     |||||||| || |||||| |||||||||||||    
T  31076825 atgatcaaaaaaatttctttagtg--ttttctcttaggattcatagtgattgtgggtgacttgaaattaaaaatggataaaaattaggtcttgttctttg 31076922  T
Q  258 tgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgct 325  Q
    ||| || |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||| ||||||    
T  31076923 tgaactcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 31076990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 114 - 327
Target Start/End: Complemental strand, 4630210 - 4630000
Alignment:
Q  114 ggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcatt-gagag 212  Q
    |||||||||||||| ||||||| ||||||||| | |||||||||||||||||||||||| ||||| |||||||||||  |||||| |||||||| |||||    
T  4630210 ggttgggaaacattttaaacacattgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgtttt--ctcttaggattcatttgagag 4630114  T
Q  213 tgtgggtggcttgaaaaatgggtagaaattatgtcttgttcttt-gtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtgg 311  Q
    | |||||| |    ||||| ||||||||||| |||||||||||| || ||||| |||| |||||||||||||||  |||||| |||||||||||||||||    
T  4630113 tttgggtgacac--aaaataggtagaaattaggtcttgttcttttgtaagcttataagttaatttcttgtaactattttgtaacactttcatcttagtgg 4630016  T
Q  312 attggagggctgctct 327  Q
    ||||||| ||||||||    
T  4630015 attggagagctgctct 4630000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 5017231 - 5017405
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaaga--gagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| |||||||||||||||||    ||||  ||||||||||| ||||||| ||| ||| ||||||||||||||||||||||||||||  |    
T  5017231 taagtgttcttgtgcagattttgaaggagaggaaaaagaaagagaaacttggattacaaacgagataactttagggttgagtgtctttgtagtgaggatc 5017330  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcatttt 183  Q
    |||| |||||||||||||||||||||||||||||| | | |||||||||||||||||||| ||||||||| ||||    
T  5017331 tcttgggttgggaaacattgtaaacaccttgggtaatgagatttcaccattggaaggatcgaaaagcttcctttt 5017405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 47 - 173
Target Start/End: Complemental strand, 22709334 - 22709208
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagtt 146  Q
    ||||| |||||||| |||||||||||| || | ||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||     
T  22709334 agagaaaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttggatagtg 22709235  T
Q  147 acatttcaccattggaaggatcaaaaa 173  Q
    | |||||||||||||||||||||||||    
T  22709234 agatttcaccattggaaggatcaaaaa 22709208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 21272724 - 21272846
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaag--agagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||||| | ||| |||||||| ||| |||||||  |||||||||| | ||||||||| ||||| ||||||||||||||||||||||||||||| |    
T  21272724 taagtgtttctttgcagtttttgaagtagaacttgaagtgagagaaactttgattacaaagggggtaactttagggttgagtgtctttgtagtgaggttc 21272823  T
Q  109 tcttaggttgggaaacattgtaa 131  Q
    |||| ||||| ||||||||||||    
T  21272824 tcttgggttgcgaaacattgtaa 21272846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 90 - 327
Target Start/End: Complemental strand, 21356318 - 21356082
Alignment:
Q  90 tgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttt 189  Q
    ||||||||||||||||  ||||| |||| ||||||||||||||||||||||||||| | |||||| ||||||||| ||| ||||||||| |||||||| |    
T  21356318 tgtctttgtagtgaggatctcttgggttaggaaacattgtaaacaccttgggtagtgagatttcatcattggaagaatc-aaaagcttccttttgtgtct 21356220  T
Q  190 tttctcttatgattc---attgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagcta-atttcttgtaac 284  Q
    ||||| ||| | |||   |||||||| ||| |   |   | |||||||||||||||| ||||||||||| ||| |||||  ||| ||  |||||||||||    
T  21356219 tttct-ttagggttcattattgagagagtgagaaac---acaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagttatttttcttgtaac 21356124  T
Q  285 tcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    || || ||| |||||||||| ||||||||||||| ||||||||    
T  21356123 tc-ttagtaacactttcatcatagtggattggagagctgctct 21356082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 18234445 - 18234334
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagaga--gaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||| |||||||||||||||||||||||  ||||||||| ||||||||||||||  ||||||||||||||||||||||||||||  |    
T  18234445 taagtgttcttgtgcagtttttgaaggagagcttgaagagaaagaaacttggattacaaaggaggtagctttagggttgagtgtctttgtagtgaggatc 18234346  T
Q  109 tcttaggttggg 120  Q
    |||| |||||||    
T  18234345 tcttgggttggg 18234334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 327
Target Start/End: Original strand, 1114999 - 1115155
Alignment:
Q  169 aaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaa 268  Q
    |||||| ||| |||||||||||  ||||||  |||||||| ||||||||||| |||||||||||| ||||||||| |  ||||| ||| |||||||||||    
T  1114999 aaaaagtttccttttgtgtttt--ctcttaatattcattgtgagtgtgggtgacttgaaaaatggatagaaattagggtttgttatttttgagcttttaa 1115096  T
Q  269 gctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    | | ||||||||||||  |||||||||| | | ||| |||||||||||||  |||||||    
T  1115097 gttgatttcttgtaacctatttgtatcattcttatcatagtggattggagatctgctct 1115155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 10076940 - 10077022
Alignment:
Q  25 cagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgagg 105  Q
    |||||||||||||||||||| |||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  10076940 cagattttgaaggagagctttaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgagg 10077022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 103 - 284
Target Start/End: Original strand, 33721387 - 33721567
Alignment:
Q  103 aggtactcttaggttgggaaacatt-gtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatga 201  Q
    |||| |||||||||||||||||||| ||||||||||| | |||| | ||||||  ||||||| ||| |||||||| | ||| |||||||  |||||| ||    
T  33721387 aggttctcttaggttgggaaacatttgtaaacacctttg-tagtgagatttcattattggaatgatgaaaaagctccctttagtgtttt--ctcttagga 33721483  T
Q  202 ttcattgag-agtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaac 284  Q
    |||||| || |||||| ||| | | |||||||||   |||||| || ||||||||| |||| |||||| |||||||||||||||    
T  33721484 ttcatttaggagtgtgtgtgacctaaaaaatgggggaaaattaggttttgttctttatgagtttttaaactaatttcttgtaac 33721567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 65 - 285
Target Start/End: Complemental strand, 99462 - 99244
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacat-tgtaaacaccttgggtagttacatttcaccattggaa 163  Q
    ||||||||| || |||| | |||  ||||||||  | ||||| || ||||||||| |||||| |||||||||||| |||||||| || |||  |  | ||    
T  99462 caaaggaggaaactttatgattgtttgtctttggtgagaggttcttttaggttggaaaacatctgtaaacaccttaggtagttatatctcattagagaaa 99363  T
Q  164 ggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagct 263  Q
     ||| |||||||||| |||   || ||||||| || ||||||||| ||||||| ||  ||| ||||||||||||||||||    ||||||| ||||||||    
T  99362 tgattaaaaagcttccttt--ggtattttctcataggattcattgtgagtgtgagtaactt-aaaaatgggtagaaattaaagtttgttctctgtgagct 99266  T
Q  264 tttaagctaatttcttgtaact 285  Q
    | ||||||||||||||||||||    
T  99265 tctaagctaatttcttgtaact 99244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 9183347 - 9183228
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    |||||||||||||||||||||||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | |   || ||| | ||||||||    
T  9183347 cagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg-attagagttctcctgggttggga 9183249  T
Q  122 aacattgtaaacaccttgggt 142  Q
    |||||||||||||||||||||    
T  9183248 aacattgtaaacaccttgggt 9183228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 157 - 313
Target Start/End: Original strand, 30518012 - 30518165
Alignment:
Q  157 attggaaggatcaaaaagcttcattttgtgttttttctcttatgattcatt-gagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt 255  Q
    ||||||||||||||||| |||| ||| ||||||| |||   | |||||||| | ||||||||||  |||||||||| ||||||||||| |  ||||||||    
T  30518012 attggaaggatcaaaaa-cttcctttagtgttttctct---aagattcatttgtgagtgtgggtaacttgaaaaataggtagaaattaaggtttgttctt 30518107  T
Q  256 tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggat 313  Q
    ||||| |||||||| || |||| ||||||   ||||||||||| | ||| ||||||||    
T  30518108 tgtgaacttttaagttagtttcatgtaacctctttgtatcactcttatcatagtggat 30518165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 168
Target Start/End: Original strand, 5674527 - 5674660
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  ||||| |||||||| |||||||||||| ||    |||||||||||||||||||| |||   ||||| |||||||  ||||||||||| |||    
T  5674527 agagcttagagagataaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcac 5674626  T
Q  136 cttgggtagtta-catttcaccattggaaggatc 168  Q
    |||||||||| |  | ||||||||||||||||||    
T  5674627 cttgggtagtgaggagttcaccattggaaggatc 5674660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 23896697 - 23896628
Alignment:
Q  28 attttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctt 95  Q
    ||||||||| ||||||||||||||||  ||||||| ||||||||||||||| ||||| ||||||||||||    
T  23896697 attttgaagaagagcttgaagagagagaaacttggattacaaaggaggtaactttagagttgagtgtctt 23896628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 504
Target Start/End: Original strand, 5017430 - 5017698
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgct 325  Q
    ||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||||||           ||||||||| |||| |||||||||| ||||    
T  5017430 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaac-----------actttcatcatagtagattggagggttgct 5017518  T
Q  326 ctttnnnnnnnagagtaggtcatattggaccgaattgggttacca-tcttgtgtgtgtttgttttctttcttgcttt-cttatcttgttgatttgattat 423  Q
    || |       ||| ||||||||||| ||||||| ||||| | || ||||| |||||||||||  ||||||| | || ||||||||  || |||||||||    
T  5017519 ctctcccct--agattaggtcatatttgaccgaactgggtcaacaatcttg-gtgtgtttgttc-ctttctttcattgcttatctttgtgctttgattat 5017614  T
Q  424 gcttgtggtgatgttttacacttagttttaagactg---tttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    |||||||||| || | ||||||||| | || | |||   ||| || ||||||||||||   |||||||||| ||||||||||||    
T  5017615 gcttgtggtgttgctctacacttagatctaggtctgttttttttttttgttgttgcttggagacactttatccattgattacca 5017698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 2973093 - 2973019
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| || ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  2973093 aaaatgggtagaaattaggt-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 2973019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 5043641 - 5043715
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||| |||||||||| || ||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  5043641 aaaatgagtagaaattaggt-ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 5043715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 284
Target Start/End: Original strand, 16569047 - 16569106
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagct--tttaagctaatttcttgtaac 284  Q
    ||||||||||||||||| || ||||||||||||||||  |||||||||||||||||||||    
T  16569047 aaaatgggtagaaattaggttttgttctttgtgagcttgtttaagctaatttcttgtaac 16569106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 208 - 327
Target Start/End: Complemental strand, 27165849 - 27165729
Alignment:
Q  208 gagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttctt-gtaactcatttgtatcactttcatctt 306  Q
    ||||||||||||  ||| |||||||| ||||||||  || ||||||| | | |||| ||| |||||||| || ||||| |  ||||||||||||||||||    
T  27165849 gagagtgtgggtaacttcaaaaatggatagaaattcagttttgttctctataagctcttatgctaatttttttgtaaccccgttgtatcactttcatctt 27165750  T
Q  307 agtggattggagggctgctct 327  Q
    ||| |||||||||||| ||||    
T  27165749 agttgattggagggctactct 27165729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 295
Target Start/End: Original strand, 17763004 - 17763073
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatc 295  Q
    ||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||||||||||||||||||    
T  17763004 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatc 17763073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 28137562 - 28137494
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtat 294  Q
    ||||||||||||||||| |  |||||||||||||||||  |||||||||||||||||||| |||||||||    
T  28137562 aaaatgggtagaaattaggg-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtat 28137494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 138
Target Start/End: Complemental strand, 26954558 - 26954486
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacacctt 138  Q
    |||||||||||| |||||||||||| |||||||    ||| || ||||||||||||||||||||||||||||||    
T  26954558 caaaggaggtaactttagggttgagagtctttgattagagtta-tcttaggttgggaaacattgtaaacacctt 26954486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 33160670 - 33160552
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga---aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg 120  Q
    |||||||||| |||||||| |||||||||   |||||||   | |||||||||||| |||||||||||| |||||||    ||| | ||||| |||||||    
T  33160670 cagattttgatggagagctggaagagagagaaaacttggggaatcaaaggaggtaactttagggttgagagtctttgattagagtt-ctcttgggttggg 33160572  T
Q  121 aaacattgtaaacaccttgg 140  Q
    ||||||||||||||||||||    
T  33160571 aaacattgtaaacaccttgg 33160552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 603238 - 603168
Alignment:
Q  231 tgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||||||||| ||| ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  603238 tgggtagaaatt-tgtgttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 603168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 17758037 - 17758111
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  17758037 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 17758111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 21588945 - 21589019
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  21588945 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 21589019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 21593678 - 21593752
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  21593678 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 21593752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 22424983 - 22424917
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcattt 290  Q
    ||||||||||||||||||| |  |||||||||||||||||  |||||||||||||||||||| |||||    
T  22424983 gaaaaatgggtagaaattaggg-ttgttctttgtgagcttgtttaagctaatttcttgtaacccattt 22424917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 31404990 - 31404872
Alignment:
Q  25 cagattttgaaggagagcttgaaga--gagaaacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    |||||||||||||||||||||||||  |||||||||||   | ||||||||| || ||||||||| || ||||||  | |   || ||||| |||||| |    
T  31404990 cagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttagggtcttttgattagagttctcttgggttggaa 31404891  T
Q  122 aacattgtaaacaccttgg 140  Q
    |||||||||||||||||||    
T  31404890 aacattgtaaacaccttgg 31404872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 26830279 - 26830203
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||||||  |||||||||| ||||    
T  26830279 gaaaaatgggtagaaatta-gagttgttctttgtgagcttgttgaagctaatttcttgtaatccatttgtatctcttt 26830203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 84 - 177
Target Start/End: Complemental strand, 5385881 - 5385789
Alignment:
Q  84 gttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagctt 177  Q
    ||||||||||||||||||||||| |  || ||||  ||||||||| || ||||||  ||||| | ||||||||||| ||||||| |||||||||    
T  5385881 gttgagtgtctttgtagtgaggttca-ttgggttaagaaacattgcaatcaccttaagtagtgagatttcaccattagaaggataaaaaagctt 5385789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 411 - 504
Target Start/End: Original strand, 21801483 - 21801576
Alignment:
Q  411 ttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    ||| |||||||||| |||||||  |||| ||||||||| |||| | ||| || |||||||||||||||   ||||||||||  |||||||||||    
T  21801483 ttgctttgattatgattgtggtattgttctacacttagatttaggtctgatttttgttgttgttgcttggagacactttatctattgattacca 21801576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 28137681 - 28137605
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||| ||| |||||||||||| |||||||    ||| | ||||| |||||||||||||||||||||||||||||    
T  28137681 caaaggagttaactttagggttgagggtctttgattagagtt-ctcttgggttgggaaacattgtaaacaccttgggt 28137605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 3039057 - 3038983
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||| ||||||||||| |  |||||| ||||||||||||  |||||||||||||||||| |||||||||| ||||    
T  3039057 aaaattggtagaaattaggg-ttgttcattgtgagctttttgaagctaatttcttgtaacccatttgtatctcttt 3038983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 33211339 - 33211265
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||| |||||||||||||  |||||||||||||||||  | ||| |||||||||||| |||||||||||| ||||    
T  33211339 aaaattggtagaaattatgg-ttgttctttgtgagcttgatgaagttaatttcttgtagctcatttgtatctcttt 33211265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 472
Target Start/End: Original strand, 33721658 - 33721754
Alignment:
Q  377 gtgtgtttgttttctttcttgctttcttatctt-gttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttg 472  Q
    |||||||  ||||||| ||| || ||||||||| |||| ||||| |||| |||||||||||||| |||||||| | || |  |||||||||||||||    
T  33721658 gtgtgttgtttttcttcctttctctcttatctttgttgctttgaatatgtttgtggtgatgtttcacacttagatctagggatgtttgttgttgttg 33721754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 26954420 - 26954366
Alignment:
Q  248 ttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||||||||||||||||||| |||||| ||||    
T  26954420 ttgttctttgtgagcttgttgaagctaatttcttgtaactcatctgtatctcttt 26954366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 504
Target Start/End: Original strand, 5572737 - 5572822
Alignment:
Q  418 gattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    |||||||||||||||| || | ||||||||| |||| | |||||| ||| |||||||||||   ||||||||||  |||||||||||    
T  5572737 gattatgcttgtggtgttgctctacacttagatttatgtctgttt-ttgctgttgttgcttggagacactttatctattgattacca 5572822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 33211416 - 33211382
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||| |||||||||||||||||||||||||||||    
T  33211416 ctcttgggttgggaaacattgtaaacaccttgggt 33211382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 3039140 - 3039103
Alignment:
Q  102 gaggtactcttaggttgggaaacattgtaaacaccttg 139  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  3039140 gaggttctcttgggttgggaaacattgtaaacaccttg 3039103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Complemental strand, 2171761 - 2171729
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgg 140  Q
    ||||| |||||||||||||||||||||||||||    
T  2171761 ctcttgggttgggaaacattgtaaacaccttgg 2171729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 9183185 - 9183111
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||||||||||  || |  |||||||||||||||||| |||||||||| ||||    
T  9183185 aaaatgggtagaaattaggg-ttgttctttgtgaatttgttgaagctaatttcttgtaacccatttgtatctcttt 9183111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 16567210 - 16567265
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagct--tttaagctaatttcttg 280  Q
    ||||||| ||||||||| || ||||| ||||||||||  |||||||||||||||||    
T  16567210 aaaatggttagaaattaggttttgttttttgtgagcttgtttaagctaatttcttg 16567265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 53
Target Start/End: Complemental strand, 30834852 - 30834824
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga 53  Q
    |||||||||||||||||||||||||||||    
T  30834852 cagattttgaaggagagcttgaagagaga 30834824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 177; Significance: 3e-95; HSPs: 93)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 11 - 406
Target Start/End: Complemental strand, 3051483 - 3051085
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtt-tacaaaggaggtaattttagggttgagtgtctttgtagtgaggta 107  Q
    ||||||||||| | ||||||||||| |||||||||||||||||  |||||||   || |||||||  || ||||||||||||||||||||||||| |||     
T  3051483 taagtgtttctatgcagattttgaaagagagcttgaagagagagaaacttgggactataaaggagagaactttagggttgagtgtctttgtagtggggtt 3051384  T
Q  108 ctcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcatt 207  Q
    |||||  |||||||||||||||||||| |||||||||| | ||||||||||||||| |||||||||||||| ||||||| |||  |||||| ||||||||    
T  3051383 ctcttgagttgggaaacattgtaaacatcttgggtagtgagatttcaccattggaaagatcaaaaagcttccttttgtgcttt--ctcttaggattcatt 3051286  T
Q  208 gagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctta 307  Q
    ||||||||  ||| | |||||||||||||||||||| || |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  3051285 gagagtgtaagtgacatgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatctta 3051186  T
Q  308 gtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggttac-catcttgtgtgtgt---ttgttttctttcttgctttct 403  Q
    ||||||||||| | |||||| |       |||| |||| ||||| ||||||||||||||||  |||||  ||||||   |||||||||||||||||||||    
T  3051185 gtggattggagaggtgctctct--cctccagaggaggttatattagaccgaattgggttactaatctttggtgtgtttgttgttttctttcttgctttct 3051088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 11 - 504
Target Start/End: Original strand, 5702215 - 5702709
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||||||||||||||||| ||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |    
T  5702215 taagtgttcttgtgcagattttgaaggagaggttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatc 5702314  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---a 205  Q
    |||| |||||||||| ||||||||||||||||||||| | ||||||||||||||| |||||||||||||| ||||||| ||||||||||| |||||   |    
T  5702315 tcttgggttgggaaatattgtaaacaccttgggtagtgagatttcaccattggaatgatcaaaaagcttccttttgtg-tttttctcttaggattcatta 5702413  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
    ||||||||||||||| ||   ||||||||||||||||| || ||| |||| ||| ||||| ||||||||||||||||||||| |||||| ||||||||||    
T  5702414 ttgagagtgtgggtgact--caaaatgggtagaaattaggttttgctcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatc 5702511  T
Q  305 ttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgctttct 403  Q
     ||| ||||||||||| |||||| |       | | ||||||||||||||||||| |||||  || |||||| |||||||||||   || |||  |  ||    
T  5702512 ataggggattggagggatgctctct--cccccatattaggtcatattggaccgaactgggtcaacaatcttg-gtgtgtttgttcctttccttcatagct 5702608  T
Q  404 tatct-tgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattac 502  Q
    ||||| | ||| ||| |||||||||||||||||| | ||||||||| | || | |||||| ||||||||||||||    |||||||||||||||||||||    
T  5702609 tatctctattgctttaattatgcttgtggtgatgctctacacttagatctaggtctgttt-ttgttgttgttgctaggagacactttattcattgattac 5702707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 29 - 502
Target Start/End: Complemental strand, 28307907 - 28307434
Alignment:
Q  29 ttttgaaggagagcttgaagagaga--aactt-ggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaaca 125  Q
    ||||||| |||||||||||||||||  ||||| || ||||||||||||||| ||||| |||||||||||||||||   ||| ||||||||||||||||||    
T  28307907 ttttgaatgagagcttgaagagagagaaacttaggattacaaaggaggtaactttagagttgagtgtctttgtagcacggttctcttaggttgggaaaca 28307808  T
Q  126 ttgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttg 225  Q
    |||| ||||||||||||||| | ||||||| ||||||||||| |||||||||  |||||||  |||||| ||| |||||| |||||||||||||| ||||    
T  28307807 ttgttaacaccttgggtagtgagatttcacaattggaaggataaaaaagctttcttttgtg--ttttcttttaggattcagtgagagtgtgggtgacttg 28307710  T
Q  226 aaaaatgggtagaaattatgtcttgttctttgtgagctttt-aagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgc 324  Q
    | ||||| ||||||| || |||||||||||| ||||||||| || ||||||||||||||| ||| ||||| |||| |||||||||||||||||| |||||    
T  28307709 agaaatgtgtagaaagtaggtcttgttctttatgagcttttaaaactaatttcttgtaacccatgtgtattacttccatcttagtggattggagagctgc 28307610  T
Q  325 tctttnnnnnnnagagtaggtcatattggaccgaattgggttacc-atcttgtgtgtgtttgttttctttcttgctttcttat-cttgttgatttgatta 422  Q
    ||  |       |||||||||||| |||||||||| ||||||||| |||||| | ||||||  |||| |||||||||||||||  || ||| |||| |||    
T  28307609 tc--tcatccccagagtaggtcattttggaccgaactgggttaccaatcttg-gcgtgttt-atttcattcttgctttcttatatttattgctttgttta 28307514  T
Q  423 tgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattac 502  Q
    ||||||||||| |||| ||||||||| |||| |  | ||||||||||| ||| ||| |||  |||| | |||||||||||    
T  28307513 tgcttgtggtgctgttatacacttagatttaggtttatttgttgttgtcgttacttgaggctacttgactcattgattac 28307434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 25 - 491
Target Start/End: Original strand, 4696357 - 4696809
Alignment:
Q  25 cagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||  ||||| |||||||||    
T  4696357 cagattttgaaggagagcttgaagagagagaaacttggattacaaaggagataactttagggttgagtgtctttgtagtgaggatctcttgggttgggaa 4696456  T
Q  123 acattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggc 222  Q
    ||||||||||||||||||||||| | ||||||||||||||| |||||||||||||| |||||||  |||||||||| |||||| |||||||||||||| |    
T  4696457 acattgtaaacaccttgggtagtgagatttcaccattggaaagatcaaaaagcttccttttgtg--ttttctcttaggattcaatgagagtgtgggtgac 4696554  T
Q  223 ttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggc 321  Q
        ||||||||||||||||| |||||||||||  || ||||| ||||||||||||||||||||           |||||||| ||||||||||||||||    
T  4696555 --acaaaatgggtagaaattaggtcttgttcttgcgtaagcttataagctaatttcttgtaact-----------ctttcatcatagtggattggagggc 4696641  T
Q  322 tgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttg 418  Q
    |||||| |       ||| |||||||||||||| |||| |||||  || |||||| ||||||||| ||  |||||| | || |||||| || ||| ||||    
T  4696642 tgctctct--cccccagattaggtcatattggatcgaactgggtcaacaatcttg-gtgtgtttg-ttcatttctttcattgcttatctttattgctttg 4696737  T
Q  419 attatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttat 491  Q
    |||||| |||||||| || | ||||||||| |||| | |||||| |||||||||||||||   ||||||||||    
T  4696738 attatgtttgtggtgttgctctacacttagatttatgtctgttt-ttgttgttgttgcttggagacactttat 4696809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 47 - 504
Target Start/End: Original strand, 19752167 - 19752619
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagtt 146  Q
    |||||||||||||| |  |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||| |||||||||||||||||||||     
T  19752167 agagagaaacttggatcgcaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgtgaaatattgtaaacaccttgggtagtg 19752266  T
Q  147 acatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgt 246  Q
    | |||||| ||||||||||||||||||||||| ||   ||| |||||||||| |||||||||||||||||||||   |||||||||||||||||||| |     
T  19752267 agatttcatcattggaaggatcaaaaagcttcctt---tgtgttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaattagga 19752363  T
Q  247 cttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtagg 344  Q
    ||||||||| ||| |||||  ||||||  |||||||||||||| ||||| |||||||||||||||||||||||| |||||||| |       ||| ||||    
T  19752364 cttgttcttgtgtaagcttgcaagctatttttcttgtaactca-ttgtaacactttcatcttagtggattggagagctgctctct--cccctagactagg 19752460  T
Q  345 tcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatct-tgttgatttgattatgcttgtggtgatgtttta 441  Q
    ||||||||||||||| | |||  || |||||| ||||||||| || || |||| | || ||||||| | ||| ||||||||||||||||||| ||   ||    
T  19752461 tcatattggaccgaactaggtcaacaatcttg-gtgtgtttg-ttcctctctttcattacttatctctattgctttgattatgcttgtggtgttgcacta 19752558  T
Q  442 cacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    ||||||| |||| | |||||  |||||||||||||||   ||||||||||  |||||||||||    
T  19752559 cacttagatttaggtctgtt--ttgttgttgttgcttggagacactttatatattgattacca 19752619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 23799311 - 23799628
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| || ||||||||||| |||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||  |    
T  23799311 taagtgttcttgtgcatattttgaaggatagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagagaggatc 23799410  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--at 206  Q
    |||| ||||||| |||||||||||||||||| ||||  | |||||||||||||||||||||||||||||| |||||||  ||||| |||| |||||  ||    
T  23799411 tcttgggttggggaacattgtaaacaccttgagtagggagatttcaccattggaaggatcaaaaagcttccttttgtg--ttttcccttaggattcatat 23799508  T
Q  207 tgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatct 305  Q
    || ||  ||||||| |    ||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||| |||||| ||||||||||     
T  23799509 tgtgacagtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatca 23799606  T
Q  306 tagtggattggagggctgctct 327  Q
    ||||||||||||||||||||||    
T  23799607 tagtggattggagggctgctct 23799628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 63 - 504
Target Start/End: Original strand, 26403015 - 26403456
Alignment:
Q  63 tacaaaggaggtaa-ttttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaacaccttgggtagttacatttcaccatt 159  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||   |||||||||||||||||||||||||||||||| | |||||||||||    
T  26403015 tacaaaggaggtaacttttagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 26403114  T
Q  160 ggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--attgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-t 256  Q
    ||||||||||||||||||| |||||||  ||||||||||||||||  |||| ||| ||| ||| |    ||||||||||||||||| ||||||||||| |    
T  26403115 ggaaggatcaaaaagcttccttttgtg--ttttctcttatgattcatattgtgagagtgagtgac--acaaaatgggtagaaattaggtcttgttcttgt 26403210  T
Q  257 gtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggacc 356  Q
    |  ||||| |||||||||||| | |||||| |||||| |||||||||| ||||||||||||| |||||||| |       ||| ||||||||||||||||    
T  26403211 gcaagcttgtaagctaatttcctataactcttttgtaacactttcatcatagtggattggagagctgctctct--cccccagattaggtcatattggacc 26403308  T
Q  357 gaattgggt-taccatcttgtgtgtgtttgtt-ttctttcttgctttcttatc-ttgttgatttgattatgcttgtggtgatgttttacacttagtttta 453  Q
    ||| |||||  || |||||| |||||||||||  || || ||  || |||||| || ||| ||||||||||||||||||| || | ||||||||| ||||    
T  26403309 gaactgggtcaacaatcttg-gtgtgtttgttcctcgtt-ttcattgcttatctttattgctttgattatgcttgtggtgttgctctacacttagattta 26403406  T
Q  454 agactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
     | |||||| |||||||| ||||||   ||||| ||||  |||||||||||    
T  26403407 ggtctgttt-ttgttgttattgcttggagacacattatctattgattacca 26403456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 11 - 327
Target Start/End: Complemental strand, 4456390 - 4456074
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| |||||||||||| ||||||||||||||||  ||||||| ||||||||||||||| ||||||||||||||||| ||||||||||  |    
T  4456390 taagtgttcttgtgcagattttgaagaagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctctgtagtgaggatc 4456291  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgat---tca 205  Q
    |||| |||||||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||||||| |||||||| || ||| ||| | |   |||    
T  4456290 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattagaaggatc-aaaagcttccttttgtgtcttctct-ttagggttcatca 4456193  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
    ||||||| ||||||  |   | |||||||||||||||||||||||||||| ||| |||||   ||||| ||||||||||||| |||||| ||||||||||    
T  4456192 ttgagagagtgggtaac---acaaatgggtagaaattatgtcttgttcttgtgtaagcttgccagctattttcttgtaactc-tttgtaacactttcatc 4456097  T
Q  305 ttagtggattggagggctgctct 327  Q
     ||||||||||||| ||||||||    
T  4456096 atagtggattggagagctgctct 4456074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 78 - 315
Target Start/End: Original strand, 7492977 - 7493212
Alignment:
Q  78 tttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagctt 177  Q
    |||||||||||| |  ||||||||||||| ||||| | |||||||||||||||||||||||||||||| | ||||||| ||| |||||||||||||||||    
T  7492977 tttagggttgagagcatttgtagtgaggttctcttggattgggaaacattgtaaacaccttgggtagtgagatttcacaattagaaggatcaaaaagctt 7493076  T
Q  178 cattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttc 277  Q
    | ||| |||||||||||  || |||| |||||||||||||||| |||||||||  ||||||||||| || ||||||| |||||||||||| | |||||||    
T  7493077 cctttagtgttttttct--taggatttattgagagtgtgggtgacttgaaaaacaggtagaaattaggttttgttctgtgtgagcttttatgttaatttc 7493174  T
Q  278 ttgtaactcatttgtatcactttcatcttagtggattg 315  Q
    || |||||  ||||||||||||||||||||||||||||    
T  7493175 ttataacttctttgtatcactttcatcttagtggattg 7493212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 11 - 327
Target Start/End: Complemental strand, 7412702 - 7412387
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| |||||||||||||||||||||||||||||  ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||  |    
T  7412702 taagtgttcttgtgcagattttgaaggagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagagaggatc 7412603  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---a 205  Q
    |||| |||||||||||||||||||||||||||||||| | |||||||||||| ||||||| ||||||||| |||| ||  | |||||||| | |||   |    
T  7412602 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgaaaggatc-aaaagcttccttttatg--tcttctcttagggttcatta 7412506  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
    ||||||| |||||   |   | |||||||||||||||| ||||||||||| ||| |||||  ||| || ||||||||||||| |||||| ||||||||||    
T  7412505 ttgagagagtgggaaac---acaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagttattttcttgtaactc-tttgtaacactttcatc 7412410  T
Q  305 ttagtggattggagggctgctct 327  Q
     ||||||||||||| ||||||||    
T  7412409 atagtggattggagagctgctct 7412387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 63 - 327
Target Start/End: Complemental strand, 6127533 - 6127267
Alignment:
Q  63 tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaacaccttgggtagttacatttcaccattg 160  Q
    |||||| ||| ||| || |||||||||||||||||||||||||| |||||   |||||||||||||||||||||  ||||||||| | ||||||||||||    
T  6127533 tacaaaagagataacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacattttgggtagtgagatttcaccattg 6127434  T
Q  161 gaaggatcaaaaagcttcattttgtgttttttctcttatgattc---attgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttc-ttt 256  Q
    |||||||||||||||||  |||||||  |||||||||| |||||   |||||||||||||||| |    ||||||||||||||||| ||||||||| |||    
T  6127433 gaaggatcaaaaagctttcttttgtg--ttttctcttaggattcattattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttctttt 6127338  T
Q  257 gtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    || ||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||||||| ||||||||    
T  6127337 gtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctct 6127267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 29 - 309
Target Start/End: Original strand, 5990315 - 5990594
Alignment:
Q  29 ttttgaaggagagcttgaagagaga--aacttggtt-tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaaca 125  Q
    |||| |||||||||| |||||||||  |||||||   |||||||  ||||| |||||||||||||||||||  |||||||| ||||| ||||||||||||    
T  5990315 tttttaaggagagctagaagagagagaaacttggaaatacaaagacggtaactttagggttgagtgtcttt--agtgaggttctcttgggttgggaaaca 5990412  T
Q  126 ttgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttg 225  Q
    |||||| || ||||| | || | ||||||||||| ||| | |||||||||||  ||| |||||||  |||||| |||||||||| |||||||||| ||||    
T  5990413 ttgtaatcatcttggtttgtgagatttcaccattcgaaaggtcaaaaagctttctttagtgtttt--ctcttaggattcattgaaagtgtgggtgacttg 5990510  T
Q  226 aaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagt 309  Q
    ||||||||||  |||| | ||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  5990511 aaaaatgggtgaaaatgaggtcgtgttctttgtgagcttttaagctaatttcttgtaacatctttgtatcactttcatcttagt 5990594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 189 - 327
Target Start/End: Original strand, 9054750 - 9054888
Alignment:
Q  189 ttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcat 288  Q
    |||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||  | |||||||||||| ||||||||||||||||||||||||   |    
T  9054750 ttttctcttaggattcattgagagtgtgagtgacttgaaaaatgggtagaaattagattttgttctttgtgcgcttttaagctaatttcttgtaaccact 9054849  T
Q  289 ttgtatcactttcatcttagtggattggagggctgctct 327  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  9054850 ttgtatcactttcatcttagtggattagagagctgctct 9054888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 19175486 - 19175805
Alignment:
Q  11 taagtgtttctgttcagattttgaaggaga---gcttgaag--agagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgagg 105  Q
    ||||||||  ||| ||| ||||||||||||   ||||||||  |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  19175486 taagtgttcttgtacagtttttgaaggagatcagcttgaagtgagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgagg 19175585  T
Q  106 tactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgat--- 202  Q
      ||||| | |||||||||||||||||||||||||||||| | ||||||| |||||||||||| ||||| ||| |||||||  | |||||||| | |       
T  19175586 atctcttggattgggaaacattgtaaacaccttgggtagtgagatttcactattggaaggatc-aaaagtttccttttgtg--tcttctcttagggttca 19175682  T
Q  203 tcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcacttt 300  Q
    |||||||||| |||||   |   | ||||| |||||| ||| ||||||||||| ||| |||||  | ||||  ||||||||||||| |||||| ||||||    
T  19175683 tcattgagagagtgggaaac---acaaatgtgtagaagttaggtcttgttcttgtgtaagcttgcaggctatttttcttgtaactc-tttgtaacacttt 19175778  T
Q  301 catcttagtggattggagggctgctct 327  Q
    |||| ||||||||||||| | ||||||    
T  19175779 catcatagtggattggagagttgctct 19175805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 212 - 475
Target Start/End: Complemental strand, 6813845 - 6813580
Alignment:
Q  212 gtgtgggtggcttgaaaaatgggtagaaa-ttatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtg 310  Q
    ||||| ||| ||||||||||||||||||| ||| || |||||||||||||||||  |||||||||||||||||| | ||||| |||||||||||||| ||    
T  6813845 gtgtgagtgacttgaaaaatgggtagaaaattaggttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtgtcactttcatcttattg 6813746  T
Q  311 gattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggtt-accatcttgtgtgtgtttgttttctttcttgc-tttcttatc- 407  Q
    |||||||| |||||||| |       || |||||| ||||||||||||| |||||| || |||||  || |||||| || ||||||| | |||||||||     
T  6813745 gattggagagctgctctct--cccctagtgtaggttatattggaccgaactgggttaacaatctttggtatgtttg-ttcctttctttcatttcttatct 6813649  T
Q  408 ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagact-gtttgttgttgttgttg 475  Q
    || ||| |||||||||||||||| || |||| |||||| ||  ||||| ||  ||||||||||||||||    
T  6813648 ttattgctttgattatgcttgtgatgttgttctacactaagacttaagtctattttgttgttgttgttg 6813580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 38 - 168
Target Start/End: Original strand, 1261714 - 1261846
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| |||||||||||| || | ||||||||||||||||||||| ||||  ||||| |||||||  ||||||||||| |||    
T  1261714 agagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcac 1261813  T
Q  136 cttgggtagttacatttcaccattggaaggatc 168  Q
    |||||||||| | ||||||||||||||||||||    
T  1261814 cttgggtagtgagatttcaccattggaaggatc 1261846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 7 - 168
Target Start/End: Complemental strand, 26288258 - 26288095
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggt 106  Q
    ||||||||||||  ||| ||||||||| || |||||||  |||||||||||||| ||||||||| || || | ||||||||| ||||||||||| |||      
T  26288258 tatttaagtgttcttgtgcagattttggagaagagcttagagagagaaacttggattacaaaggggggaactctagggttgaatgtctttgtagagagaa 26288159  T
Q  107 actcttaggttggg--aaacattgtaaacaccttgggtagttacatttcaccattggaaggatc 168  Q
     |||||  ||||||  ||||||||||||||||||||||||| | ||||||||||||||||||||    
T  26288158 tctcttgagttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc 26288095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 7 - 168
Target Start/End: Complemental strand, 26301515 - 26301352
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggt 106  Q
    ||||||||||||  ||| ||||||||| || |||||||  |||||||||||||| ||||||||| || || | ||||||||| ||||||||||| |||      
T  26301515 tatttaagtgttcttgtgcagattttggagaagagcttagagagagaaacttggattacaaaggggggaactctagggttgaatgtctttgtagagagaa 26301416  T
Q  107 actcttaggttggg--aaacattgtaaacaccttgggtagttacatttcaccattggaaggatc 168  Q
     |||||  ||||||  ||||||||||||||||||||||||| | ||||||||||||||||||||    
T  26301415 tctcttgagttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc 26301352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 7 - 168
Target Start/End: Complemental strand, 26313509 - 26313346
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggt 106  Q
    ||||||||||||  ||| ||||||||| || |||||||  |||||||||||||| ||||||||| || || | ||||||||| ||||||||||| |||      
T  26313509 tatttaagtgttcttgtgcagattttggagaagagcttagagagagaaacttggattacaaaggggggaactctagggttgaatgtctttgtagagagaa 26313410  T
Q  107 actcttaggttggg--aaacattgtaaacaccttgggtagttacatttcaccattggaaggatc 168  Q
     |||||  ||||||  ||||||||||||||||||||||||| | ||||||||||||||||||||    
T  26313409 tctcttgagttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc 26313346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 9054217 - 9054328
Alignment:
Q  71 aggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaa 170  Q
    |||||| |||||| |||||||| ||||||||||| | ||||| |||||| ||||||| ||| ||||||||||||| | ||||||||||||||||||||||    
T  9054217 aggtaactttaggattgagtgtttttgtagtgagattctcttgggttggaaaacattataatcaccttgggtagtgagatttcaccattggaaggatcaa 9054316  T
Q  171 aaagcttcattt 182  Q
    ||||||||||||    
T  9054317 aaagcttcattt 9054328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 84 - 327
Target Start/End: Original strand, 31071035 - 31071280
Alignment:
Q  84 gttgagtgtctttgtagtgaggtactcttaggttgggaaa--cattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcatt 181  Q
    ||||||||||||||||||||||  ||||| ||||||||||  |||||||||||||||||||||| | ||||||||||||||||||||   ||||||| |     
T  31071035 gttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-ttaagcttcctc 31071133  T
Q  182 ttgtgttttttctcttatgattc--attgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagcta-atttc 277  Q
    |||||| || ||| ||| | |||  |||| ||| ||||  ||    | ||||||||||||| || | ||||||||| ||| |||||  ||||||  ||||    
T  31071134 ttgtgtcttctcttttagggttcatattgtgagagtgg--ggaaacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttc 31071231  T
Q  278 ttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    ||||||| | |||||| |||||||||| ||||||||||||| ||||||||    
T  31071232 ttgtaac-cctttgtaacactttcatcatagtggattggagagctgctct 31071280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 30291620 - 30291695
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| || ||||||||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  30291620 aaaatgggtagaaattaggttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatcacttt 30291695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 9765623 - 9765720
Alignment:
Q  47 agagagaaacttggtt-tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaacaccttgggt 142  Q
    ||||||||||||||   |||||||||||||| || ||||||||||||||||| |||||||| |||||   |||||||||||||||||||||||||||||    
T  9765623 agagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttg-agtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 9765720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 13204634 - 13204750
Alignment:
Q  125 attgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggctt 224  Q
    ||||||||||||||||||||| | |||||||| |||| || |||||||||||| ||||    | ||||||| || |||||||||||||||| ||||  ||    
T  13204634 attgtaaacaccttgggtagtgagatttcaccgttgggagaatcaaaaagctttattt--aatattttctcataggattcattgagagtgtaggtgaatt 13204731  T
Q  225 gaaaaatgggtagaaatta 243  Q
    |||||||||||| ||||||    
T  13204732 gaaaaatgggtaaaaatta 13204750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 42498046 - 42498163
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    |||||||||||||||||||||||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | | | || ||||| ||||||||    
T  42498046 cagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg-attaaagttctcttgggttggga 42498144  T
Q  122 aacattgtaaacaccttgg 140  Q
    ||| |||||||||||||||    
T  42498145 aacgttgtaaacaccttgg 42498163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 15212638 - 15212757
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    |||||||||||||||||||||||||||||  |||||||   | |||| ||||||| |||||||||||| ||||||| | |   || ||||| ||||||||    
T  15212638 cagattttgaaggagagcttgaagagagagaaacttgggaaatcaaatgaggtaactttagggttgagggtctttg-attagagttctcttgggttggga 15212736  T
Q  122 aacattgtaaacaccttgggt 142  Q
    |||||||||||||||||||||    
T  15212737 aacattgtaaacaccttgggt 15212757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 1292617 - 1292543
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| || ||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  1292617 aaaatgggtagaaattaagt-ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 1292543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 3303824 - 3303750
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| || |||||||||||||||||  |||| |||||||||||||||||||||||||| ||||    
T  3303824 aaaatgggtagaaattaagt-ttgttctttgtgagcttgtttaacctaatttcttgtaactcatttgtatctcttt 3303750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 140
Target Start/End: Complemental strand, 12702951 - 12702837
Alignment:
Q  28 attttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaac 124  Q
    ||||||||||||||||||||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | |   || ||||| |||||||||||    
T  12702951 attttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaaatttagggttgagggtctttg-attagagttctcttgggttgggaaac 12702853  T
Q  125 attgtaaacaccttgg 140  Q
    ||||||||||||||||    
T  12702852 attgtaaacaccttgg 12702837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 30143195 - 30143313
Alignment:
Q  26 agattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    ||||||||||||||||||||||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | |   || ||||| |||||||||    
T  30143195 agattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg-attagagttctcttgggttgggaa 30143293  T
Q  123 acattgtaaacaccttgggt 142  Q
    ||||||||||||| ||||||    
T  30143294 acattgtaaacacattgggt 30143313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 36979716 - 36979608
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg-aaacattgtaaacacc 136  Q
    |||||||  |||||||||||||| |||||||| ||| ||    |||||||||||||||||||| |||   ||||||||||||| ||||||||||| ||||    
T  36979716 agagcttagagagagaaacttggattacaaagaagggaaccaaagggttgagtgtctttgtagagagtgtctcttaggttgggaaaacattgtaatcacc 36979617  T
Q  137 ttgggtagt 145  Q
    |||||||||    
T  36979616 ttgggtagt 36979608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 18141835 - 18141908
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| ||  |||||||||||||||| |  |||||||||||||||||| |||||||||||||||    
T  18141835 aaaatgggtagaaattaggt--tgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcacttt 18141908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 43036275 - 43036394
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||| ||||| |||||||||||  |||||||   | |||||||||||| |||||||||||| |||||||    ||| | ||||| ||||||||    
T  43036275 cagattttgaatgagaggttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagtt-ctcttgggttggga 43036373  T
Q  122 aacattgtaaacaccttgggt 142  Q
    |||||||||||||||||||||    
T  43036374 aacattgtaaacaccttgggt 43036394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 8863562 - 8863646
Alignment:
Q  212 gtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcact 298  Q
    ||||| ||| |||||||||||||||||||||| |  |||||||  ||||||||||||| ||||||||||||||   |||||||||||    
T  8863562 gtgtgagtgacttgaaaaatgggtagaaattaaggtttgttct--gtgagcttttaagttaatttcttgtaacctctttgtatcact 8863646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 18141717 - 18141791
Alignment:
Q  67 aaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaaca-ttgtaaacaccttggg 141  Q
    ||||||||||||||||||||||| ||||||| | |  ||| |||||||||||||||||| ||||||||||||||||    
T  18141717 aaggaggtaattttagggttgagggtctttg-attagggttctcttaggttgggaaacatttgtaaacaccttggg 18141791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 3772214 - 3772274
Alignment:
Q  235 tagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtat 294  Q
    ||||||||| || |||||||||||||||||  ||||||||||||||||||||||||||||||    
T  3772214 tagaaattaggt-ttgttctttgtgagcttatttaagctaatttcttgtaactcatttgtat 3772274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 6598986 - 6599054
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtat 294  Q
    ||||||||||||||||| || |||||||||| ||||||  |||||||||||||||||||| |||||||||    
T  6598986 aaaatgggtagaaattaagt-ttgttctttgcgagcttgtttaagctaatttcttgtaacccatttgtat 6599054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 6674439 - 6674507
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtat 294  Q
    ||||||||||||||||| || |||||||||| ||||||  |||||||||||||||||||| |||||||||    
T  6674439 aaaatgggtagaaattaagt-ttgttctttgcgagcttgtttaagctaatttcttgtaacccatttgtat 6674507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 286
Target Start/End: Original strand, 10929813 - 10929873
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagct--tttaagctaatttcttgtaactc 286  Q
    |||||||||||||||||||| ||||||||||||||||  || ||||||||||||||||||||    
T  10929813 aaaatgggtagaaattatgt-ttgttctttgtgagcttgttgaagctaatttcttgtaactc 10929873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 11383997 - 11384073
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| |  |||||||||||||| || |  ||||||||||||||||||||||||||||| ||||    
T  11383997 gaaaaatgggtagaaattaggg-ttgttctttgtgagtttgttgaagctaatttcttgtaactcatttgtatctcttt 11384073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 33037565 - 33037674
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| |||||||||||| ||    ||||||||||||||| |||| |||   ||||| |||||||  ||||||||||| |||    
T  33037565 agagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtcttcgtagagagtgtctcttgggttgggaaaaacattgtaatcac 33037664  T
Q  136 cttgggtagt 145  Q
    ||||||||||    
T  33037665 cttgggtagt 33037674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 40328793 - 40328857
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcattt 290  Q
    ||||||||||||||||| || |||||||||||||||||  |||| |||||||||||||||||||||    
T  40328793 aaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaaactaatttcttgtaactcattt 40328857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 42093126 - 42093188
Alignment:
Q  222 cttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaac 284  Q
    |||||||||| |||||||||||||   ||||||||||||| || |||||||||||||||||||    
T  42093126 cttgaaaaataggtagaaattatgatatgttctttgtgagtttgtaagctaatttcttgtaac 42093188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 42435147 - 42435071
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  42435147 gaaaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 42435071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 4731553 - 4731629
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||| |||||||||||| |||||||    ||| | ||||| |||||||||||||||||||||||||||||    
T  4731553 caaaggaggtaactttagggttgagggtctttgattagagtt-ctcttgggttgggaaacattgtaaacaccttgggt 4731629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 27811173 - 27811249
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||| |||||||||||| |||||||    ||| | |||||||||||| ||||||||||||||||||||||    
T  27811173 caaaggaggtaaatttagggttgagggtctttgattagagtt-ctcttaggttggaaaacattgtaaacaccttgggt 27811249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 4759831 - 4759941
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg---aaacattgtaaaca 134  Q
    |||||||  |||||||| ||||| || ||||||||||||    |||||||||||||||||||| |||   ||||| |||||||   ||||||||||| ||    
T  4759831 agagcttagagagagaatcttggattgcaaaggaggtaaccaaagggttgagtgtctttgtagagagagtctcttgggttgggaaaaaacattgtaatca 4759930  T
Q  135 ccttgggtagt 145  Q
    |||||||||||    
T  4759931 ccttgggtagt 4759941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 18655414 - 18655488
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  18655414 aaaatgggtagaaattaagg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 18655488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 19491853 - 19491779
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| || ||||||||||||||||| |  || ||||||||||||||| |||||||||| ||||    
T  19491853 aaaatgggtagaaattaggt-ttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctcttt 19491779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 19491974 - 19491895
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactctt--aggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||| ||||||||||||||  | ||||||||||| |||||   ||||||||||||| ||||||| |||||||    
T  19491974 caaaggaggtaactttagggttgagtgcatgtgtagtgaggttctcttgagggttgggaaacatcgtaaacatcttgggt 19491895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 27811292 - 27811366
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  27811292 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 27811366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 30143354 - 30143428
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  30143354 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 30143428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 41365001 - 41364927
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||| ||||||||||| || |||||||||||||| ||  |||||||||||||||||||| |||||||||| ||||    
T  41365001 aaaattggtagaaattaggt-ttgttctttgtgagtttgtttaagctaatttcttgtaacacatttgtatcccttt 41364927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 41366768 - 41366694
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||||||||||||||||| ||||||||||| |||||  ||||||||||||||| ||||  ||||||||| ||||    
T  41366768 aaaatgggtagaaattatgt-ttgttctttgtaagcttgtttaagctaatttcttttaacctatttgtatcccttt 41366694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 4733659 - 4733778
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga----aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgg 119  Q
    ||||||||||||||||| |||||||||||    |||||||   | |||| ||||||| |||||||||||| |||||||    ||| | ||||| ||||||    
T  4733659 cagattttgaaggagaggttgaagagagagagaaacttgggaaatcaaaagaggtaactttagggttgagggtctttgattagagtt-ctcttgggttgg 4733757  T
Q  120 gaaacattgtaaacaccttgg 140  Q
    |||||||||||||||||||||    
T  4733758 gaaacattgtaaacaccttgg 4733778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 49 - 145
Target Start/End: Original strand, 10688908 - 10689006
Alignment:
Q  49 agagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacaccttgggtagt 145  Q
    |||||||||||| | |||||||||| ||    |||||||||||||||||||| |||   ||||| |||||||  ||||||||||| |||||||||||||    
T  10688908 agagaaacttggataacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt 10689006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 17982505 - 17982622
Alignment:
Q  25 cagattttgaaggagagcttga--agagagaaacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||||||||||||  ||||||||||||||   | ||||||| | || ||||||||| || ||||||| | |   || ||||| ||||||||    
T  17982505 cagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtctttg-attagagttctcttgggttggga 17982603  T
Q  122 aacattgtaaacaccttgg 140  Q
    |||||||||||||||||||    
T  17982604 aacattgtaaacaccttgg 17982622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 139
Target Start/End: Complemental strand, 3303943 - 3303870
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttg 139  Q
    |||||||||||| |||| ||||||| ||||||| | |  ||| ||||| ||||||||||||||||||||||||||    
T  3303943 caaaggaggtaactttacggttgagggtctttg-attagggttctcttgggttgggaaacattgtaaacaccttg 3303870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 33352045 - 33352121
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||| |||||| |||||||||||| |||||||    ||| | ||||| |||||||||||||||||||||||||||||    
T  33352045 caaagaaggtaactttagggttgagggtctttgattagagtt-ctcttgggttgggaaacattgtaaacaccttgggt 33352121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 4162511 - 4162585
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||| ||| || |||||||||| || ||| |  ||||||||||||||||||||||||||||| ||||    
T  4162511 aaaatgggtagaagttaggt-ttgttctttgagaacttgttgaagctaatttcttgtaactcatttgtatctcttt 4162585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 4283538 - 4283612
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||| ||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  4283538 aaaatgggtagaaattaggg-ttgttttttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 4283612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 9765759 - 9765833
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||||||||||||||    |||||||||||||||||| |||||||||| ||||    
T  9765759 aaaatgggtagaaattaggg-ttgttctttgtgagcttggcaaagctaatttcttgtaacccatttgtatctcttt 9765833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 15212800 - 15212874
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  15212800 aaaatgggtagaaattaggg-ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt 15212874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 40221759 - 40221833
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  || ||||||||||||||| |||||||||| ||||    
T  40221759 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctcttt 40221833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 44353807 - 44353881
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  44353807 aaaatgggtagaaattaggg-ttgttctttgtgaacttgttgaagctaatttcttgtaacacatttgtatctcttt 44353881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 19945676 - 19945559
Alignment:
Q  25 cagattttgaaggagagcttgaagagag--aaacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||||||||||||||||||  ||||||||   | ||||||| | || ||||||||| || ||||||| | |   || ||||| ||| ||||    
T  19945676 cagattttgaaggagagcttgaagagagacaaacttgggaaatcaaaggaagcaactttagggtttagagtctttg-attagagttctcttgggtcggga 19945578  T
Q  122 aacattgtaaacaccttgg 140  Q
    |||||||||||||||||||    
T  19945577 aacattgtaaacaccttgg 19945559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 3318823 - 3318745
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaaca-ttgtaaacaccttgggt 142  Q
    |||| ||||||| |||||||||||| |||||||  | ||||| ||||| |||| ||||||| ||| |||||||||||||    
T  3318823 caaatgaggtaactttagggttgagggtctttggtgggaggttctcttgggttaggaaacatttgaaaacaccttgggt 3318745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 4743434 - 4743400
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||| |||||||||||||||||||||||||||||    
T  4743434 ctcttgggttgggaaacattgtaaacaccttgggt 4743400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 5689283 - 5689359
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| |  | || |||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  5689283 gaaaaatgggtagaaattaagg-tggtgctttgtgagcttgtcaaagctaatttcttgtaacccatttgtatctcttt 5689359  T

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Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 501
Target Start/End: Original strand, 9765958 - 9766043
Alignment:
Q  415 tttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgatta 501  Q
    ||||||||||||||||||| || | ||||||||| |||| |  ||||| |||||||||||||||   ||||||||||  ||||||||    
T  9765958 tttgattatgcttgtggtgttgctctacacttagatttaggtttgttt-ttgttgttgttgcttggagacactttatctattgatta 9766043  T

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Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 295
Target Start/End: Complemental strand, 18106212 - 18106163
Alignment:
Q  248 ttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatc 295  Q
    |||||||||| |||||| |  |||||||||||||||||||||||||||||    
T  18106212 ttgttctttgcgagcttgttgaagctaatttcttgtaactcatttgtatc 18106163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 18106309 - 18106275
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||| |||||||||||||||||||||||||||||    
T  18106309 ctcttgggttgggaaacattgtaaacaccttgggt 18106275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 18852924 - 18853033
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| | |||||||||| ||    |||||||||||||||||| | |||   ||||| |||||||  ||| ||||||| |||    
T  18852924 agagcttagagagagaaacttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcac 18853023  T
Q  136 cttgggtagt 145  Q
    ||||||||||    
T  18853024 cttgggtagt 18853033  T

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Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 18870318 - 18870427
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaa--cattgtaaacac 135  Q
    |||||||  |||||||||| ||| | |||||||||| ||    |||||||||||||||||| | |||   ||||| ||||||||||  |||||||| |||    
T  18870318 agagcttagagagagaaacatggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 18870417  T
Q  136 cttgggtagt 145  Q
    ||||||||||    
T  18870418 cttgggtagt 18870427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 30655985 - 30655877
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaa--cattgtaaacac 135  Q
    ||||||| ||||||||| ||||| | |||||||||| ||    |||||||||||||||||| | |||   ||||| ||||||||||  |||||||| |||    
T  30655985 agagcttaaagagagaa-cttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 30655887  T
Q  136 cttgggtagt 145  Q
    ||||||||||    
T  30655886 cttgggtagt 30655877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 31218110 - 31218226
Alignment:
Q  26 agattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    ||||||||||| ||||||||||||||||  |||||||   | ||||||| | || ||||||||| || |||||||    ||| | ||||| |||||||||    
T  31218110 agattttgaagaagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttagggtctttgattagagtt-ctcttgggttgggaa 31218208  T
Q  123 acattgtaaacaccttgg 140  Q
    ||||||||||||||||||    
T  31218209 acattgtaaacaccttgg 31218226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 33503787 - 33503849
Alignment:
Q  222 cttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaac 284  Q
    |||||||||||||||||||||| || |||| ||||| | |||| | |||||||||||| ||||    
T  33503787 cttgaaaaatgggtagaaattaggtattgtgctttgagggcttgtgagctaatttcttttaac 33503849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 41366845 - 41366811
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||||| |||||||||||||||||||||||||||    
T  41366845 ctcttagattgggaaacattgtaaacaccttgggt 41366811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 327
Target Start/End: Original strand, 1261905 - 1262005
Alignment:
Q  228 aaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggagggctgct 325  Q
    ||||||||||||  || ||||||| ||| ||| |||||  |||||| ||| |||||||| | |||||| |||||||||| ||||||||||||| ||||||    
T  1261905 aaatgggtagaatctaggtcttgtacttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 1262003  T
Q  326 ct 327  Q
    ||    
T  1262004 ct 1262005  T

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Target: chr8; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 4162400 - 4162468
Alignment:
Q  70 gaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttg 139  Q
    ||||||| |||||||||||| ||||||| | |  ||| ||||| |||||| |||||||||||||||||||    
T  4162400 gaggtaactttagggttgagggtctttg-attagggttctcttgggttggaaaacattgtaaacaccttg 4162468  T

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Target: chr8; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 5689166 - 5689242
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||| ||| |||||||||||| ||||||| | |  ||| |||||  ||| ||||||||||||||||||||||||    
T  5689166 caaaggagataactttagggttgagggtctttg-attagggttctcttgagtttggaaacattgtaaacaccttgggt 5689242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 504
Target Start/End: Complemental strand, 6127179 - 6127090
Alignment:
Q  415 tttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    ||||||||||||||||||| || | ||||||||  ||||   |||||| |||||||||||||||   ||||||| ||  |||||||||||    
T  6127179 tttgattatgcttgtggtgttgctctacacttaaatttatatctgttttttgttgttgttgcttggagacacttaatctattgattacca 6127090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 300
Target Start/End: Original strand, 10015136 - 10015169
Alignment:
Q  267 aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||||||||||||| ||||    
T  10015136 aagctaatttcttgtaactcatttgtatctcttt 10015169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 41365120 - 41365044
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||| ||||||| |||||||||||| |||||||    ||| | || || |||||||||||||||||||||||||||||    
T  41365120 caaatgaggtaactttagggttgagggtctttgattagagtt-cttttgggttgggaaacattgtaaacaccttgggt 41365044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Complemental strand, 1746449 - 1746417
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgg 140  Q
    ||||| |||||||||||||||||||||||||||    
T  1746449 ctctttggttgggaaacattgtaaacaccttgg 1746417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 1822313 - 1822364
Alignment:
Q  235 tagaaattatgtcttgttctttgtgagct--tttaagctaatttcttgtaac 284  Q
    |||||||||||  ||||||||||||||||  || ||||||||||||||||||    
T  1822313 tagaaattatggtttgttctttgtgagcttgttgaagctaatttcttgtaac 1822364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 1856758 - 1856809
Alignment:
Q  235 tagaaattatgtcttgttctttgtgagct--tttaagctaatttcttgtaac 284  Q
    |||||||||||  ||||||||||||||||  || ||||||||||||||||||    
T  1856758 tagaaattatggtttgttctttgtgagcttgttgaagctaatttcttgtaac 1856809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 4731672 - 4731746
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||| ||||||||||||| |  || ||||||||||||||| |||||||||| ||||    
T  4731672 aaaatgggtagaaattaggg-ttgctctttgtgagcttgttgaacctaatttcttgtaacccatttgtatctcttt 4731746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 11772065 - 11771997
Alignment:
Q  249 tgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattgga 317  Q
    |||||||||||| ||| ||| |||||||||| ||||   ||||||||||| | ||| ||||||||||||    
T  11772065 tgttctttgtgaacttgtaaactaatttcttttaacctctttgtatcactcttatcatagtggattgga 11771997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 53
Target Start/End: Complemental strand, 19948637 - 19948609
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga 53  Q
    |||||||||||||||||||||||||||||    
T  19948637 cagattttgaaggagagcttgaagagaga 19948609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 53
Target Start/End: Complemental strand, 34254644 - 34254616
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga 53  Q
    |||||||||||||||||||||||||||||    
T  34254644 cagattttgaaggagagcttgaagagaga 34254616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 43036437 - 43036511
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  || |||||||||||||| ||||||||||| ||||    
T  43036437 aaaatgggtagaaattaggg-ttgttctttgtgaacttgttgaaactaatttcttgtaattcatttgtatctcttt 43036511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #93
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Original strand, 44303791 - 44303823
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgg 140  Q
    ||||| |||||||||||||||||||||||||||    
T  44303791 ctcttgggttgggaaacattgtaaacaccttgg 44303823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 176; Significance: 1e-94; HSPs: 106)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 11 - 504
Target Start/End: Original strand, 40592506 - 40592999
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||||||||||| ||||||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |    
T  40592506 taagtgttcttgtgcagattttgaatgagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatc 40592605  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--at 206  Q
    |||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||  ||    
T  40592606 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtg--ttttctcttaggattcatat 40592703  T
Q  207 tgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatct 305  Q
    || ||| ||||||| |    |||||||||||||||||  | |||||||| ||| ||||| ||||||||||||||||||||| |||||| ||||||||||     
T  40592704 tgtgagagtgggtgac--acaaaatgggtagaaattagattttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatca 40592801  T
Q  306 tagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttct 403  Q
    |||| |||||||| ||| |||| |       ||| ||||||||||||||||||| |||||  || |||||| |||||||||||   |||||| | || ||    
T  40592802 tagtcgattggagagcttctctct--cccacagattaggtcatattggaccgaactgggtcaacaatcttg-gtgtgtttgttccttttctttcattgct 40592898  T
Q  404 tatct-tgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattac 502  Q
    ||||| | ||| ||||||||||||||||||| || | ||||||||| |||| | |||||| |||||||||||||||   |||| ||||| ||||||||||    
T  40592899 tatctatattgctttgattatgcttgtggtgttgctctacacttagatttaggtctgttt-ttgttgttgttgcttggagacattttatccattgattac 40592997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 25 - 503
Target Start/End: Original strand, 8370227 - 8370702
Alignment:
Q  25 cagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    |||||||||||| |||||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  ||||| |||||||||    
T  8370227 cagattttgaagaagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaa 8370326  T
Q  123 acattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--attgagagtgtgggtg 220  Q
    |||||||||||| |||||||||| | |||||||||||||||||||| ||||| ||| |||||||  |||||||||| |||||  |||| ||| |||||||    
T  8370327 acattgtaaacatcttgggtagtgagatttcaccattggaaggatc-aaaagtttccttttgtg--ttttctcttaggattcatattgtgagagtgggtg 8370423  T
Q  221 gcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagg 319  Q
     |   | |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||     
T  8370424 ac---acaaatgggtagaaattatgtcttgttcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggaga 8370519  T
Q  320 gctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgt-gtgtgtttgttttctttcttgc-tttcttatcttgttgatt 416  Q
    |||||||| |       ||| ||||||||||||||||||| |||||  || ||||| | ||||||||| || ||||||| | || ||||||||  || ||    
T  8370520 gctgctctct--cccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttg-ttcctttctttcattgcttatctttgtgctt 8370616  T
Q  417 tgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacc 503  Q
    ||||||||||||||||| || | ||||||||| | || | |||||| |||||||||||||||   |||||||||  |||||||||||    
T  8370617 tgattatgcttgtggtgttgctctacacttagatctaggtctgttt-ttgttgttgttgcttggagacactttacacattgattacc 8370702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 47 - 323
Target Start/End: Original strand, 3323453 - 3323727
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagtt 146  Q
    ||||| |||||| | ||||||||||||||| ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||     
T  3323453 agagacaaacttcgattacaaaggaggtaactttagggttgagtgtctttatagtgaggttctcttgggttgggaaacattgtaaacaccttgggtagtg 3323552  T
Q  147 acatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgt 246  Q
    | ||||||||||||||| |||||||||||||| |||||||  ||||||||||  ||||||||||||||||||||   |||| |||||||||||||||||     
T  3323553 agatttcaccattggaatgatcaaaaagcttccttttgtg--ttttctcttagaattcattgagagtgtgggtgatatgaacaatgggtagaaattatga 3323650  T
Q  247 cttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctg 323  Q
    ||||||| ||||| ||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  3323651 cttgttcttttgtaagcttataagctaatttcttgtaactca-ttgtaacactttcatcttagtggattggagggctg 3323727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 11 - 507
Target Start/End: Complemental strand, 48438577 - 48438082
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaa--gagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| || ||||||||||||||||||||  ||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||  |    
T  48438577 taagtgttcttgtgcaaattttgaaggagagcttgaatagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtaaggatc 48438478  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---a 205  Q
    |||| |||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||| |||||||  |||||||||| |||||   |    
T  48438477 tctt-ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaatgatcaaaaagcttccttttgtg--ttttctcttaggattcatta 48438381  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
    ||||||||||||||| |    ||||||||||||||||| ||||||||||| ||| ||||| || |||||||||||||||||| |||||| ||||||||||    
T  48438380 ttgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttatatgctaatttcttgtaactcttttgtaacactttcatc 48438283  T
Q  305 ttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttct-tgctttc 402  Q
     |||||||||||||||||||||| |       ||| ||||||||||||||||||| | |||  |  |||||| ||||||||| || |||||| |  ||      
T  48438282 atagtggattggagggctgctctct--cccccagattaggtcatattggaccgaactaggtcaataatcttg-gtgtgtttg-ttcctttctgtcattgt 48438187  T
Q  403 ttatc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgatta 501  Q
    ||||| || ||| ||||||||||||||||||| || | ||||||||| | || | |||||| |||||||||||||||   || |||||||  ||||||||    
T  48438186 ttatctttattgttttgattatgcttgtggtgttgctctacacttagatctaggtctgttt-ttgttgttgttgcttggagatactttatctattgatta 48438088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 25 - 327
Target Start/End: Original strand, 1736042 - 1736346
Alignment:
Q  25 cagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    ||||||||||||||||| ||| ||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  || || |||||||||    
T  1736042 cagattttgaaggagagtttggagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctattgggttgggaa 1736141  T
Q  123 acattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---attgagagtgtgggt 219  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||   ||||||||||| |||    
T  1736142 acattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttctttttgtg--ttttctcttaggattcattattgagagtgttggt 1736239  T
Q  220 ggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggag 318  Q
    | |    ||||||||||||||||| ||||||||||| ||| ||||| |||| |||||||||||||||| |||||| |||||||||| |||||||||||||    
T  1736240 gac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagttaatttcttgtaactcttttgtaacactttcatcatagtggattggag 1736337  T
Q  319 ggctgctct 327  Q
    |||||||||    
T  1736338 ggctgctct 1736346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 24694890 - 24695205
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| |||||||||||| ||||||||||||||||  || |||| ||||||||||||||| ||||||||||||||||||||||||||||  |    
T  24694890 taagtgttcttgtgcagattttgaagaagagcttgaagagagagaaatttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatc 24694989  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattg 208  Q
    |||| ||||||||||||||||||||||||||||| || | ||||||||||||||| |||||||||||||| |||||||  |||||| ||| |||||||||    
T  24694990 tcttgggttgggaaacattgtaaacaccttgggtggtgagatttcaccattggaatgatcaaaaagcttccttttgtg--ttttcttttaggattcattg 24695087  T
Q  209 agagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctta 307  Q
    |||||||||||| |    ||||||||||||||||| ||||||||| ||||| || || ||||||||||||||||||||| |||||| |||||||||| ||    
T  24695088 agagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttttgtaagtttataagctaatttcttgtaactcttttgtaacactttcatcata 24695185  T
Q  308 gtggattggagggctgctct 327  Q
    | ||||| ||||| ||||||    
T  24695186 gcggattagagggttgctct 24695205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 47 - 327
Target Start/End: Original strand, 3328119 - 3328397
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagtt 146  Q
    |||||||||||||| ||| ||||||| ||| ||||||||||| ||||||||||||||| | ||||| |||||| |||||||||||||||||||||||||     
T  3328119 agagagaaacttggattagaaaggagataactttagggttgaatgtctttgtagtgagcttctcttgggttggaaaacattgtaaacaccttgggtagtg 3328218  T
Q  147 acatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgt 246  Q
    | |||||| |||||||||||||||||| |||| |||||||  |||||||||| ||| |||||||||||||||||   |||||||||||||||||||| |     
T  3328219 agatttcagcattggaaggatcaaaaaacttccttttgtg--ttttctcttaggatacattgagagtgtgggtgatatgaaaaatgggtagaaattagga 3328316  T
Q  247 cttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    ||||||| ||||| ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||    
T  3328317 cttgttcttttgtaagcttataagctaatttcttgtaactca-ttgtaacactttcatcttagtggattgaagggctgctct 3328397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 11 - 320
Target Start/End: Complemental strand, 8126992 - 8126683
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagag--cttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||| | | |||||||||||||||||   ||  |||||||||||||| |||||||| | |||| ||||  |||||||||||||||||||||||      
T  8126992 taagtgtttatttgcagattttgaaggagagtttttagagagagaaacttggattacaaagaaagtaactttacagttgagtgtctttgtagtgaggttt 8126893  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattg 208  Q
    |||| |||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||| |||||||  |||||||||| |||||||||    
T  8126892 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcatcattggaaggatcaaaaagcttctttttgtg--ttttctcttaagattcattg 8126795  T
Q  209 agagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctta 307  Q
    |||||||||||| |   |||||||||||||||||| || |||||| ||||| ||||| ||||||||||||||||||||| |||||| |||||||||| ||    
T  8126794 agagtgtgggtgac-acaaaaatgggtagaaattaagtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcgta 8126696  T
Q  308 gtggattggaggg 320  Q
    |||||||||||||    
T  8126695 gtggattggaggg 8126683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 11 - 325
Target Start/End: Complemental strand, 36029455 - 36029141
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaag--agagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||||||||||||||||||||||||  |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |    
T  36029455 taagtgttcttgtgcagattttgaaggagagcttgaagtaagagaaacttggattacaaaggaggtaaatttagggttgagtgtctttgtagtgaggatc 36029356  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--at 206  Q
    |||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| |||||||  |||||||||| |||||  ||    
T  36029355 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtg--ttttctcttaggattcatat 36029259  T
Q  207 tgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatct 305  Q
    |  ||| ||| ||| |    ||||||||||||||||| ||||||||||| ||| || || ||||||||||||||||||||| |||||| ||||||||||     
T  36029258 tttgagagtgagtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagtttgtaagctaatttcttgtaactcttttgtaacactttcatca 36029161  T
Q  306 tagtggattggagggctgct 325  Q
    ||||||||||||| ||||||    
T  36029160 tagtggattggagagctgct 36029141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 47923628 - 47923947
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||||||||||||||||||||||||||  |||||||||| ||||||||||||||| |||||| ||||||||||||||||||||   |    
T  47923628 taagtgttcttgtgcagattttgaaggagagcttgaagagagagaaacttggattacaaaggaggtaactttaggattgagtgtctttgtagtgagaatc 47923727  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---a 205  Q
    |||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||  ||||||| || |||||   |    
T  47923728 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtg--ttttctcgtaggattcatta 47923825  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtg--agcttttaagctaatttcttgtaactcatttgtatcactttcat 303  Q
    |||||||||||| || |    |||||||||| |||||| || ||| ||||||||  | ||||||||||||||||||||||||| |||||| |||||||||    
T  47923826 ttgagagtgtggatgac--acaaaatgggtataaattaggttttgctctttgtgtaaacttttaagctaatttcttgtaactcttttgtagcactttcat 47923923  T
Q  304 cttagtggattggagggctgctct 327  Q
    | |||| ||||| |||||||||||    
T  47923924 catagtagattgaagggctgctct 47923947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 11 - 327
Target Start/End: Complemental strand, 21711583 - 21711269
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| |||||||||||| ||||||||||||||||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |    
T  21711583 taagtgttcttgtgcagattttgaag-agagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatc 21711485  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---a 205  Q
    |||| |||||||||||||||||||||||||| ||||| | |||||||||||||||||||| ||||||||| |||||||  |||||||||| |||||   |    
T  21711484 tcttgggttgggaaacattgtaaacaccttgagtagtgagatttcaccattggaaggatc-aaaagcttccttttgtg--ttttctcttaggattcatta 21711388  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
    ||||||||||||||  |   | |||||||||||||||| |||||| |||| ||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  21711387 ttgagagtgtgggtaac---acaaatgggtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatc 21711292  T
Q  305 ttagtggattggagggctgctct 327  Q
     ||||||||| ||| ||||||||    
T  21711291 atagtggatttgagagctgctct 21711269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 47 - 504
Target Start/End: Original strand, 1417253 - 1417705
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagtt 146  Q
    ||||| |||||||  ||||||||||||||| |||||||||||||||||||||||||||||  |||| |||||||||||||||||||||| || ||||||     
T  1417253 agagaaaaacttgaattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttatcttgggttgggaaacattgtaaacactttaggtagtg 1417352  T
Q  147 acatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgt 246  Q
    | |||||||||||| ||||||||||||| ||  |||||||  |||||||||| ||||||||| |||||||||||   |||||||||||||||||||| |     
T  1417353 agatttcaccattgaaaggatcaaaaagttttcttttgtg--ttttctcttaggattcattgggagtgtgggtgatatgaaaaatgggtagaaattagga 1417450  T
Q  247 cttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggt 345  Q
    ||||||| ||||| || || |||||||||||||| ||||||| ||||| ||||||| |||||||||||||||||| |||||| |       ||| |||||    
T  1417451 cttgttcttttgtaagtttataagctaatttcttataactca-ttgtaacactttcttcttagtggattggagggatgctctct--cccccagattaggt 1417547  T
Q  346 catattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgcttgtggtgatgttttac 442  Q
    |||||||||||||| |||||  || |||||| ||||||||| || || |||| | || |||||| || ||| |||||||||||||||| || |  | |||    
T  1417548 catattggaccgaactgggtcaacaatcttg-gtgtgtttg-ttcctctctttcattgcttatctttattgctttgattatgcttgtgatgttactctac 1417645  T
Q  443 acttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    |||||| |||| |  ||||  ||||||||||||||| | ||||||||||  |||||||||||    
T  1417646 acttagatttatgtatgtt--ttgttgttgttgcttgaagacactttatctattgattacca 1417705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 47 - 504
Target Start/End: Complemental strand, 26299312 - 26298853
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagtt 146  Q
    |||||||||||||| ||| ||||||||||| ||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||     
T  26299312 agagagaaacttggattataaaggaggtaactttagggttgaatgtctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtg 26299213  T
Q  147 acatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgt 246  Q
    | |||||||||||||||  ||||||||||||| |||| ||| |||||||||| |||| ||||||| |||||||| |    ||||||||||||||||| ||    
T  26299212 agatttcaccattggaattatcaaaaagcttcctttt-tgtgttttctcttaggattaattgagattgtgggtgac--acaaaatgggtagaaattaggt 26299116  T
Q  247 cttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggt 345  Q
    ||||||||| | | || || ||||||||||||||||||||| |||||| |||||||||| |||| ||||||||||||||||| |       ||| || ||    
T  26299115 cttgttcttgtctaagtttataagctaatttcttgtaactcttttgtaacactttcatcatagtagattggagggctgctctct--cccccagattatgt 26299018  T
Q  346 catattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgcttgtggtgatgttttac 442  Q
    ||||||| |||||| |||||  || |||||| ||||||||| || || |||| | || |||||| || ||| ||||||||||||||||||| || | |||    
T  26299017 catattgaaccgaactgggtcaacaatcttg-gtgtgtttg-ttcctctctttcgttgcttatctttattgctttgattatgcttgtggtgttgctctac 26298920  T
Q  443 acttagttttaagactgt-----ttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    |||||| |||| | ||||     ||||||||||||||| ||   |||||||||| ||||||||||||    
T  26298919 acttagatttaggtctgtttttgttgttgttgttgttgtttggagacactttatccattgattacca 26298853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 47 - 327
Target Start/End: Complemental strand, 25796107 - 25795827
Alignment:
Q  47 agagagaaacttggtt-tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaacaccttgggta 143  Q
    ||||||||||||||   |||||||||||||| || |||||||||||||||||||||||||  |||||   |||||||||||| |||||||||||||||||    
T  25796107 agagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggctctcttgagggttgggaaacaatgtaaacaccttgggta 25796008  T
Q  144 gttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaatta 243  Q
    || | |||||||||||||||||||||||||||||| |||| ||  |||||||||| ||||||||||||||||||||| |    |||||||||||||||||    
T  25796007 gtgagatttcaccattggaaggatcaaaaagcttccttttatg--ttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtagaaatta 25795912  T
Q  244 tgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
     ||||||||| ||||| ||||| ||||||||||||||||||||| || ||| ||||||||||||||| |||||||| ||||||||    
T  25795911 ggtcttgttcttttgtaagcttataagctaatttcttgtaactctttcgtaacactttcatcttagtagattggagagctgctct 25795827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 11 - 327
Target Start/End: Complemental strand, 40845017 - 40844697
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaaga--gagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| || |||||||||||||| || ||||  ||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||  |    
T  40845017 taagtgttcttgtgcaaattttgaaggagagttttaagatagagaaacttagattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatc 40844918  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcacc-----attggaaggatcaaaaagcttcattttgtgttttttctcttatgatt 203  Q
    | || ||||| |||||||||||||||||||| ||| | | |||| |||     |||||||||||||||||||||| |||||||||||  |||||| ||||    
T  40844917 tattgggttgagaaacattgtaaacaccttgagtaatgagatttgacctgaccattggaaggatcaaaaagcttccttttgtgtttt--ctcttaggatt 40844820  T
Q  204 cattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttca 302  Q
    ||||||||||||||||| |    ||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||| |||||| ||||||||    
T  40844819 cattgagagtgtgggtgacac--aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttca 40844722  T
Q  303 tcttagtggattggagggctgctct 327  Q
    || ||||||||| ||||||||||||    
T  40844721 tcatagtggatttgagggctgctct 40844697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 37 - 504
Target Start/End: Original strand, 3715751 - 3716218
Alignment:
Q  37 gagagcttgaagagagaaacttg-gtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaac 133  Q
    ||||||||  ||||||||||||| |  |||||||||||||| ||||||||||| ||||||||||||||||| |||||   ||||||||||||||||||||    
T  3715751 gagagctttgagagagaaacttgagaatacaaaggaggtaactttagggttgaatgtctttgtagtgaggttctcttgagggttgggaaacattgtaaac 3715850  T
Q  134 accttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--attgagagtgtgggtggcttgaaaaat 231  Q
    |||||||||||| | |||||||||||||||||||||||||||||  |||||||  |||||||||| |||||  |||| ||  ||||||| |    |||||    
T  3715851 accttgggtagtgagatttcaccattggaaggatcaaaaagctttcttttgtg--ttttctcttaggattcatattgtgaaagtgggtgac--acaaaat 3715946  T
Q  232 gggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttn 330  Q
    |||||||||||| ||||||||||| ||| || || ||||||||||||||||||||| |||||| |||||||||| |||| |||||||| |||||||| |     
T  3715947 gggtagaaattaagtcttgttcttgtgtaagtttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtagattggagagctgctctct- 3716045  T
Q  331 nnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgctt 427  Q
          ||| ||||||||||||||||||| |||||  || |||||| ||||||||| || || |||| | || |||||| || ||| | |||||||||||    
T  3716046 -ctcctagattaggtcatattggaccgaactgggtcaacaatcttg-gtgtgtttg-ttcctctctttcattgcttatctttattgttgtgattatgctt 3716142  T
Q  428 gtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    |||||| || | ||||||||| |||| | |||||| |||||||||||||||   ||||||||||  |||||||||||    
T  3716143 gtggtgttgctctacacttagatttatgtctgttt-ttgttgttgttgcttgtagacactttatctattgattacca 3716218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 47 - 327
Target Start/End: Complemental strand, 37466619 - 37466337
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagtt 146  Q
    |||||||||||||| ||||||||||||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||     
T  37466619 agagagaaacttggattacaaaggaggtaactttagagctgagtgtctttgtagtgaggttctcttaggttgggaaacattgtaaacactttgggttgtg 37466520  T
Q  147 acatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggct----tgaaaaatgggtagaaatt 242  Q
    | ||||||||||||||| |||| ||||||||| |||||||  |||| | ||| ||||||||||||||| |||||  |    |||||||||||||||||||    
T  37466519 agatttcaccattggaaagatcgaaaagcttccttttgtg--ttttattttaggattcattgagagtgcgggtgagtgatatgaaaaatgggtagaaatt 37466422  T
Q  243 atgtcttgttc-tttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    | | ||||||| ||||| ||||| |||  ||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  37466421 aggacttgttcttttgtaagcttataaattaatttcttgtaactca-ttgtaacactttcatcttagtggattggagggctactct 37466337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 11 - 504
Target Start/End: Complemental strand, 16264711 - 16264220
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaag--agagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||| ||||||||||||||||||||  |||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||  |    
T  16264711 taagtgttcttgtgcagtttttgaaggagagcttgaagtaagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtaatgaggatc 16264612  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgat---tca 205  Q
    |||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| |||||||  | |||||||| | |   |||    
T  16264611 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtg--tcttctcttagggttcatca 16264515  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
    ||||||| ||||||  |   | ||||| |||||||||| ||||||||||| ||  |||||  |||||| ||||||||||||| |||||| ||||||||||    
T  16264514 ttgagagagtgggtaac---acaaatgtgtagaaattaggtcttgttcttgtggaagcttgcaagctattttcttgtaactc-tttgtaacactttcatc 16264419  T
Q  305 ttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatc-ttgtgtgtgtttgttttctttcttgc-ttt 401  Q
     ||||||||||||| |||||||| |       ||| ||||||||||||||||||| | |||  || ||| || |||||||||| || ||||||| | ||     
T  16264418 atagtggattggagagctgctctct--cccccagattaggtcatattggaccgaactaggtcaacaatctttttgtgtgtttg-ttcctttctttcattg 16264322  T
Q  402 cttatcttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgatta 501  Q
     |||||||  || |||||||||| |||||||| || | ||||||||| | || || ||||| ||||||||||| |||   |||||||||  |||||||||    
T  16264321 tttatctttgtgctttgattatgtttgtggtgttgctctacacttagatctaggattgttt-ttgttgttgtttcttggagacactttacacattgatta 16264223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 63 - 327
Target Start/End: Complemental strand, 21353875 - 21353608
Alignment:
Q  63 tacaaaggaggtaattttagggtt--gagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaacaccttgggtagttacatt-tcacca 157  Q
    |||||||||||||| |||||||||  |||||||||||||||||||| |||||   ||||||||||||| |||||||| ||||||||| | | | ||||||    
T  21353875 tacaaaggaggtaactttagggttttgagtgtctttgtagtgaggttctcttgagggttgggaaacatcgtaaacactttgggtagtgagaatgtcacca 21353776  T
Q  158 ttggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttg 257  Q
    ||||||||||| ||||| ||| ||| |||||||  |||||| |||||||||  |||||| ||||| |||||||||||||||||||| ||  |||||||||    
T  21353775 ttggaaggatccaaaagtttcctttagtgtttt--ctcttaagattcattgtaagtgtgagtggcatgaaaaatgggtagaaattaggttgtgttctttg 21353678  T
Q  258 tgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    |||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  21353677 tgagctcttgtgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctct 21353608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 116 - 327
Target Start/End: Original strand, 18552716 - 18552924
Alignment:
Q  116 ttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgt 215  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||| |||||||  |||||||||| ||||||||||||||||    
T  18552716 ttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaaacttccttttgtg--ttttctcttaggattcattgagagtgt 18552813  T
Q  216 gggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggatt 314  Q
    ||||| |    ||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||    
T  18552814 gggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggatt 18552911  T
Q  315 ggagggctgctct 327  Q
    |||||||||||||    
T  18552912 ggagggctgctct 18552924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 27974676 - 27974993
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |    
T  27974676 taagtgttcttgtgcagattttgaaggagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatc 27974775  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---a 205  Q
    |||| ||| |||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| |||||||| || ||| ||| | |||   |    
T  27974776 tcttgggtcgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctct-ttagggttcatta 27974873  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcactttcat 303  Q
    |||||||  ||||   |   | |||||||||||||||| ||||||||||| ||| |||||  ||||||  ||||||||||||| |||||| |||||||||    
T  27974874 ttgagagaatgggaaac---acaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaactc-tttgtaacactttcat 27974969  T
Q  304 cttagtggattggagggctgctct 327  Q
    | ||||||||||||| ||||||||    
T  27974970 catagtggattggagagctgctct 27974993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 11 - 504
Target Start/End: Original strand, 30709521 - 30710007
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagaga--gaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| |||||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||||| ||||||||||        || |  |    
T  30709521 taagtgttcttgtgcagattttgaaggagagcttgaagagacagaaacttggattacaaaggaggtaactttagagttgagtgtc--------gatgatc 30709612  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcatt- 207  Q
    | || |||||||||||||||||||||||||||| ||| | |||||| |||||||| ||||||| |||||| |||||||||||  |||||| ||||||||     
T  30709613 ttttgggttgggaaacattgtaaacaccttggggagtgagatttcatcattggaatgatcaaatagcttccttttgtgtttt--ctcttaggattcatta 30709710  T
Q  208 --gagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatc 304  Q
      ||||||||||||| |    || |||||||||||||| |||||| |||| ||| ||||| ||||||||||||||||||||| |||||| || |||||||    
T  30709711 ttgagagtgtgggtgacac--aagatgggtagaaattaggtcttgctcttgtgtaagcttataagctaatttcttgtaactcttttgtaacaatttcatc 30709808  T
Q  305 ttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgt-gtgtgtttgttttctttcttgc-ttt 401  Q
     |||||||||||||||||||||| |       ||| ||||||||||||||||||| |||||  || ||||| | ||||||||| || ||||||| | ||     
T  30709809 atagtggattggagggctgctctct--cccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttg-ttcctttctttcattg 30709905  T
Q  402 cttatcttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgatta 501  Q
    ||||||||  || ||||||||||||| ||||| || | || |||||| | || | |||||| |||||||||||||||   |||||||||  |||||||||    
T  30709906 cttatctttgtgctttgattatgcttatggtgttgctctaaacttagatctaggtctgttt-ttgttgttgttgcttggagacactttacacattgatta 30710004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 11 - 256
Target Start/End: Original strand, 25929120 - 25929365
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaag--agagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||||| |  ||||||||||| |||| ||||||  |||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||| |    
T  25929120 taagtgtttctttgtagattttgaagtagagtttgaagtgagagaaacttagattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttc 25929219  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattg 208  Q
    ||||  ||||| |||||||||||||| |||||||||| | |||||||||| ||||||||||||||||||| |||| ||| |||||||||| |||||||||    
T  25929220 tcttgagttggaaaacattgtaaaca-cttgggtagtgagatttcaccatcggaaggatcaaaaagcttctttttttgtgttttctcttaggattcattg 25929318  T
Q  209 agagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttcttt 256  Q
     ||||||||||| | || |||||| ||||||| || ||||||||||||    
T  25929319 tgagtgtgggtgacatg-aaaatgagtagaaactaggtcttgttcttt 25929365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 6794439 - 6794754
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagag--cttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||||| | |||||||||||||||||   ||  |||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||| |    
T  6794439 taagtgtttctttgcagattttgaaggagaggttttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtcattgtagtgaggttc 6794538  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--at 206  Q
    ||||  ||||||||||||||||||||||||||||||| | ||||||||||||||| || | ||||||||| |||  ||| |||||||||| | |||  ||    
T  6794539 tcttgagttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaatgaac-aaaagcttccttt--tgtattttctcttagggttcatat 6794635  T
Q  207 tgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaa-tttcttgtaactcatttgtatcactttcatc 304  Q
    || ||| ||||||| |   | |||||||||||||||| | ||||||||| ||| |||||  ||||||| ||||||||||||| |||||| ||||||||||    
T  6794636 tgtgagagtgggtgac---acaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctaattttcttgtaactc-tttgtaacactttcatc 6794731  T
Q  305 ttagtggattggagggctgctct 327  Q
     ||||||||||||| ||||||||    
T  6794732 atagtggattggagagctgctct 6794754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 11 - 318
Target Start/End: Complemental strand, 35925842 - 35925535
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaag--agagaaacttggtttacaaaggag--gtaattttagggttgagtgtctttgtagtgaggt 106  Q
    ||||||||  ||| ||| ||||||||| |||||| |||  |||||||||||| |||||||||||  |||| ||||||||||| ||||||||||||||||     
T  35925842 taagtgttcttgtgcagtttttgaaggtgagcttaaagtgagagaaacttggattacaaaggagatgtaactttagggttgaatgtctttgtagtgagga 35925743  T
Q  107 actcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc-- 204  Q
     || || |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| |||||||  |||||||||| |||||      
T  35925742 tcttttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtg--ttttctcttaggattcat 35925646  T
Q  205 attgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttct-ttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcat 303  Q
    |||| ||| ||||||| |   | |||||||||||||||| || |||||||  ||| ||||| ||| ||||||||||||||||| |||||| |||||||||    
T  35925645 attgtgagagtgggtgac---acaaatgggtagaaattaggttttgttctagtgtaagcttataaactaatttcttgtaactc-tttgtaacactttcat 35925550  T
Q  304 cttagtggattggag 318  Q
    | |||||||||||||    
T  35925549 catagtggattggag 35925535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 63 - 286
Target Start/End: Complemental strand, 47649880 - 47649656
Alignment:
Q  63 tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaacaccttgggtagttacatttcaccattg 160  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| |||||   |||||||||||||||||||||||||||||||||| |||||||||||     
T  47649880 tacaaaggagataactttagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagttagatttcaccattt 47649781  T
Q  161 gaaggatcaaaaagcttcattttgtgttttttctcttatgattc--attgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tg 257  Q
    |||||||||||||||||| |||||||  |||||||||| |||||  |||| ||| ||||||| |    ||||||||||||||||| ||||||||||| ||    
T  47649780 gaaggatcaaaaagcttccttttgtg--ttttctcttaggattcatattgcgagagtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtg 47649685  T
Q  258 tgagcttttaagctaatttcttgtaactc 286  Q
      ||||| |||| ||||||||||||||||    
T  47649684 gaagcttgtaagttaatttcttgtaactc 47649656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 7 - 187
Target Start/End: Original strand, 33386395 - 33386576
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgag 104  Q
    ||||||||||||  ||| ||||||||| || |||||||||||||  |||||||||| |||||||||||  || |||||||||||||||||||||||||||    
T  33386395 tatttaagtgttcttgtgcagattttggagtagagcttgaagagagagaaacttggattacaaaggagagaactttagggttgagtgtctttgtagtgag 33386494  T
Q  105 gtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgt 187  Q
    |  ||||| ||||| |||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| ||||||||    
T  33386495 gatctcttgggttgagaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgt 33386576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 39032279 - 39032455
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||| |||||||| |||||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | |    
T  39032279 taagtgttcttgtgcagtttttgaagtagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgagat-c 39032377  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgt 187  Q
    |||| |||||| ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| ||||||||    
T  39032378 tcttgggttggtaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgt 39032455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 47 - 187
Target Start/End: Original strand, 27986218 - 27986357
Alignment:
Q  47 agagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagtt 146  Q
    |||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||     
T  27986218 agagagaaacttggattacaaaggagggaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtg 27986317  T
Q  147 acatttcaccattggaaggatcaaaaagcttcattttgtgt 187  Q
    | |||||||||||||||||||| ||||||||| ||||||||    
T  27986318 agatttcaccattggaaggatc-aaaagcttccttttgtgt 27986357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 278 - 477
Target Start/End: Original strand, 25929435 - 25929633
Alignment:
Q  278 ttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggttaccatcttgtg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||| |||||||||||| ||||||||||||||| |    
T  25929435 ttgtaactcatttgtatcactttcatcttagtggattggagggctgctct---ccccccagagtaggtcgtattggaccgaactgggttaccatcttg-g 25929530  T
Q  378 tgtgtttg-ttttctttcttgctttcttatc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactg-tttgttgttgttgtt 474  Q
    |||||||| |||||||||||||||||||||| |||||| |||||||||| |||||||| || | ||||||||| |||| |  || |||||||||||||||    
T  25929531 tgtgtttgtttttctttcttgctttcttatctttgttgctttgattatgtttgtggtgttgctctacacttagatttaggtttgttttgttgttgttgtt 25929630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 7 - 327
Target Start/End: Complemental strand, 32143688 - 32143367
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgag 104  Q
    ||||||||||||  ||| ||||||||| ||||||| |||||||||||  || |||| |||||||||||| || | ||||||||||||||||||||||||     
T  32143688 tatttaagtgttcttgtgcagattttggaggagag-ttgaagagagagaaatttggattacaaaggagggaactctagggttgagtgtctttgtagtgat 32143590  T
Q  105 gtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc 204  Q
    |  ||||| |||||| ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| | |||||| || ||| ||| | |||    
T  32143589 gatctcttgggttggaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttcctcttgtgtcttctcttttagggttc 32143491  T
Q  205 --attgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcacttt 300  Q
      |||||||| ||||  ||    | ||||||||||||  || ||||||||||| ||| |||||  ||||||  ||||||||||| | |||||| ||||||    
T  32143490 atattgagagagtgg--ggaaacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaac-cctttgtaacacttt 32143394  T
Q  301 catcttagtggattggagggctgctct 327  Q
    |||| ||||||||||||| ||||||||    
T  32143393 catcatagtggattggagagctgctct 32143367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 9 - 327
Target Start/End: Complemental strand, 27453321 - 27453004
Alignment:
Q  9 tttaagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggt 106  Q
    ||||||||||  ||| ||| |||||||| ||||||||||||||||  ||||||| |||||||||||| || |||||||||||||||||  |||||||||     
T  27453321 tttaagtgttcttgtgcagtttttgaag-agagcttgaagagagagaaacttggattacaaaggagggaactttagggttgagtgtct--gtagtgagga 27453225  T
Q  107 actcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc-- 204  Q
     ||||| |||||| ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| |||||||| || ||| ||| | |||      
T  27453224 tctcttgggttggcaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctcttttagggttcat 27453126  T
Q  205 attgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcactttca 302  Q
    |||||||| ||||  ||    | ||||||||||||| || |  |||||||| ||| |||||  ||||||  ||||||||||| | |||||| ||||||||    
T  27453125 attgagagagtgg--ggaaacacaaatgggtagaaaataggaattgttcttgtgtaagcttgcaagctatttttcttgtaac-cctttgtaacactttca 27453029  T
Q  303 tcttagtggattggagggctgctct 327  Q
    || ||||||||||||| ||||||||    
T  27453028 tcatagtggattggagagctgctct 27453004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 202 - 327
Target Start/End: Original strand, 4386843 - 4386968
Alignment:
Q  202 ttcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttc 301  Q
    ||||| ||||||||||||| ||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  4386843 ttcatcgagagtgtgggtgacttgaaaaatgagtagaaattaggttttgttctttgtgagcttttaagctaatttcttgtaacccatttgtatcactttt 4386942  T
Q  302 atcttagtggattggagggctgctct 327  Q
    |||||| |||||||||| ||||||||    
T  4386943 atcttattggattggagagctgctct 4386968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 7 - 172
Target Start/End: Original strand, 26928320 - 26928486
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaagagagaaa--cttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgag 104  Q
    ||||||||||||  ||| ||||||||| ||||||| |||||||||||||  ||||| ||||||| |||| || | |||||||||||||||||||||||||    
T  26928320 tatttaagtgttcttgtgcagattttggaggagag-ttgaagagagaaaaacttggattacaaacgagggaactctagggttgagtgtctttgtagtgag 26928418  T
Q  105 gtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaa 172  Q
    |  ||||| |||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  26928419 gatctcttgggttgggaaacattgtaaacaccttgggtaatgagatttcaccattggaaggatcaaaa 26928486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 11 - 172
Target Start/End: Complemental strand, 37726037 - 37725874
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| ||||||||| | | |||||||||||||||  ||||||| |||||||||||| || ||||||||||||||||||||||||||||  |    
T  37726037 taagtgttcttgtgcagattttggaagtgagcttgaagagagagaaacttggattacaaaggaggaaactttagggttgagtgtctttgtagtgaggatc 37725938  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaa 172  Q
    |||| ||| |||||||||| |||||||||||| |||| | |||||||||||| |||||||||||    
T  37725937 tcttgggtggggaaacattataaacaccttggatagtgagatttcaccattgaaaggatcaaaa 37725874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 25 - 145
Target Start/End: Complemental strand, 27027054 - 27026932
Alignment:
Q  25 cagattttgaaggagagcttgaagagagaaa--cttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    |||||||||||| ||||||||||||||||||  ||||| ||||||||||||||| |||||||||||||||||||||| |||||  ||||| | | |||||    
T  27027054 cagattttgaagaagagcttgaagagagaaaaacttggattacaaaggaggtaactttagggttgagtgtctttgtactgaggatctcttggatagggaa 27026955  T
Q  123 acattgtaaacaccttgggtagt 145  Q
    |||||||||||||||||||||||    
T  27026954 acattgtaaacaccttgggtagt 27026932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 38 - 325
Target Start/End: Complemental strand, 1306285 - 1305996
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| ||| |||||||| || | ||| ||||||||||||||||||||||  ||||| |||||||  |||||||||||||||    
T  1306285 agagcttagagagagaaacttggattataaaggagggaactctagagttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacac 1306186  T
Q  136 cttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--attgagagtgtgggtggcttgaaaaatgg 233  Q
    |||||||||| | ||||||||||||||||||||   ||||||| | |||||| || ||| ||| | |||  |||||||| ||||  ||    | ||||||    
T  1306185 cttgggtagtgagatttcaccattggaaggatc-ttaagcttcctcttgtgtcttctcttttagggttcatattgagagagtgg--ggaaacacaaatgg 1306089  T
Q  234 gtagaaattatgtcttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggagggctgct 325  Q
    ||||||| |||| ||||||||| ||| |||||  || |||  ||||||||||| | |||||| |||||||||| ||||||||||||| ||||||    
T  1306088 gtagaaactatgacttgttcttgtgtaagcttgcaaactatttttcttgtaac-cctttgtaacactttcatcgtagtggattggagagctgct 1305996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 27038398 - 27038280
Alignment:
Q  26 agattttgaaggagagcttgaagagagaaa--cttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaa 123  Q
    ||||||||||| ||||||||||||||||||  ||||| ||||||||||| ||| |||||||||||||| |||||||||||||  ||||| ||| ||||||    
T  27038398 agattttgaagaagagcttgaagagagaaaaacttggattacaaaggagataactttagggttgagtgcctttgtagtgaggatctcttgggtagggaaa 27038299  T
Q  124 cattgtaaacaccttgggt 142  Q
    |||||||||||||||||||    
T  27038298 cattgtaaacaccttgggt 27038280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 63 - 154
Target Start/End: Original strand, 4386755 - 4386846
Alignment:
Q  63 tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagttacatttca 154  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||| ||||| | ||||||    
T  4386755 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgggaaacattgtaatcaccttgagtagtgagatttca 4386846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 23392221 - 23392106
Alignment:
Q  29 ttttgaaggagagcttga-agagagaaacttggtt-tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacat 126  Q
    |||||||||||||||  | ||||||||||||||   | ||||||||  || ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  23392221 ttttgaaggagagctgaagagagagaaacttgggactgcaaaggagagaaatttagggttgagtgtctttgtagtgaggttctcttgggttgggaaacat 23392122  T
Q  127 tgtaaacaccttgggt 142  Q
    ||||||||||||||||    
T  23392121 tgtaaacaccttgggt 23392106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 126 - 313
Target Start/End: Original strand, 5366164 - 5366351
Alignment:
Q  126 ttgtaaacaccttgggtagttacatttcacca-ttggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgag-agtgtgggtggct 223  Q
    |||||||||||||||||||| | ||||||  | ||||||||||| ||||| ||| ||| |||||||  | |||| |||||||| |  |||||||||| ||    
T  5366164 ttgtaaacaccttgggtagtaagatttcaataattggaaggatcgaaaagtttcctttagtgtttt--cgcttaggattcatttattagtgtgggtgact 5366261  T
Q  224 tgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggat 313  Q
     |||||| |||||||||||| |  || ||| ||||||| ||||||| ||||||||||||||   ||||||||||||||||| ||||||||    
T  5366262 agaaaaaagggtagaaattaagattttttcattgtgagattttaagataatttcttgtaacctctttgtatcactttcatcatagtggat 5366351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 23410641 - 23410529
Alignment:
Q  29 ttttgaaggagagcttga-agagagaaacttggt-ttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacat 126  Q
    |||||||||||||||  | ||||||||||||||  || ||||||||  || ||||||||||||||||||||||||||||| ||||| |||||| ||||||    
T  23410641 ttttgaaggagagctgaagagagagaaacttgggattgcaaaggagagaactttagggttgagtgtctttgtagtgaggttctcttgggttggaaaacat 23410542  T
Q  127 tgtaaacaccttg 139  Q
    |||||||||||||    
T  23410541 tgtaaacaccttg 23410529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 192 - 327
Target Start/End: Complemental strand, 29100342 - 29100205
Alignment:
Q  192 tctcttatgattcattga-gagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcattt 290  Q
    |||||||||||||||| | |||||| |||| ||||||||| | |||||||||| |  |||||||||||||| ||||||||||||||||| ||||   |||    
T  29100342 tctcttatgattcatttatgagtgtaggtgacttgaaaaacgagtagaaattagggtttgttctttgtgagtttttaagctaatttcttataacctcttt 29100243  T
Q  291 gtatcact-ttcatcttagtggattggagggctgctct 327  Q
    |||||||| || ||| ||||||| ||||| ||||||||    
T  29100242 gtatcactctttatcatagtggaatggagagctgctct 29100205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 226 - 300
Target Start/End: Complemental strand, 32744590 - 32744516
Alignment:
Q  226 aaaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||||||||||||||| || |||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  32744590 aaaaatgggtagaaatta-gt-ttgttctttgtgagcttgtttaagctaatttcttgtaactcatttgtatcacttt 32744516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 32891117 - 32891192
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagct--tttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| || ||||||||||||||||  || ||||||||||||||||||||||||||||| ||||    
T  32891117 aaaatgggtagaaattaagttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 32891192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 210 - 284
Target Start/End: Complemental strand, 25517145 - 25517071
Alignment:
Q  210 gagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaac 284  Q
    ||||||||||| ||||||||||  |||||||||| |  |||||||||||||||||||||||||||||||| ||||    
T  25517145 gagtgtgggtgacttgaaaaataagtagaaattagggtttgttctttgtgagcttttaagctaatttcttataac 25517071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 40734350 - 40734469
Alignment:
Q  25 cagattttgaaggagagcttgaagag--agaaacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||||||||||||||||  ||||||||||   | |||||||| ||| |||||||||||| ||||||| | |   || ||||| ||||||||    
T  40734350 cagattttgaaggagagcttgaagagacagaaacttggaaaatcaaaggagataactttagggttgagggtctttg-attagagttctcttgggttggga 40734448  T
Q  122 aacattgtaaacaccttgggt 142  Q
    |||||||||||||||||||||    
T  40734449 aacattgtaaacaccttgggt 40734469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 760861 - 760935
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |||| |||||||||||||||  |||||||||||||||||||| |||||||||| ||||    
T  760861 aaaatgggtagaaattaggtct-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 760935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 22835156 - 22835082
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| || |||||||||||||||||  |||||||||||||||||||| |||||||||| ||||    
T  22835156 aaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 22835082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 29682373 - 29682447
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||||||||||||||||| |||||||||||||||||  ||||||||||||||||| || |||||||||| ||||    
T  29682373 aaaatgggtagaaattatgt-ttgttctttgtgagcttgtttaagctaatttcttgtcacccatttgtatcccttt 29682447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 39153515 - 39153441
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| || |||||| ||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  39153515 aaaatgggtagaaattaggt-ttgttcattgtgagcttgtttaagctaatttcttgtaactcatttgtatcccttt 39153441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 2671343 - 2671452
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| |||||||||||| ||    |||||||||||||||||||| |||   ||||| |||||||  ||||||||||| |||    
T  2671343 agagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcac 2671442  T
Q  136 cttgggtagt 145  Q
    ||||||||||    
T  2671443 cttgggtagt 2671452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 9091058 - 9091167
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| |||||||||||| ||    |||||||||||||||||||| |||   ||||| |||||||  ||||||||||| |||    
T  9091058 agagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtatctcttgggttgggaaaaacattgtaatcac 9091157  T
Q  136 cttgggtagt 145  Q
    ||||||||||    
T  9091158 cttgggtagt 9091167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 40372553 - 40372662
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| |||||||||||| ||    |||||||||||||||||||| |||   ||||| |||||||  ||||||||||| |||    
T  40372553 agagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcac 40372652  T
Q  136 cttgggtagt 145  Q
    ||||||||||    
T  40372653 cttgggtagt 40372662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 225 - 296
Target Start/End: Complemental strand, 53921659 - 53921587
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatca 296  Q
    ||||||||||||||||||| || ||||| ||||||||||| |  ||||||||||||||||||||||||||||||    
T  53921659 gaaaaatgggtagaaattaggt-ttgttgtttgtgagcttgttaaagctaatttcttgtaactcatttgtatca 53921587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 9666623 - 9666556
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagct--tttaagctaatttcttgtaactcattt 290  Q
    |||||||||||||||||||  | ||||||||||||||||  || ||||||||||||||||||||||||    
T  9666623 gaaaaatgggtagaaattagattttgttctttgtgagcttgttgaagctaatttcttgtaactcattt 9666556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 23392063 - 23391989
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||| |||||||||| || |||||||||||||||||  ||||| |||||||||||||| |||||||||||||||    
T  23392063 aaaatgagtagaaattaagt-ttgttctttgtgagcttgtttaagataatttcttgtaacccatttgtatcacttt 23391989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 23410483 - 23410409
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||||||||||||||||| || ||||||||||||||  ||||||||||||| | |||| |||||||||||||||    
T  23410483 aaaatgggtagaaattatgt-ttattctttgtgagcttgtttaagctaatttcgtataacccatttgtatcacttt 23410409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 278 - 318
Target Start/End: Original strand, 25929365 - 25929405
Alignment:
Q  278 ttgtaactcatttgtatcactttcatcttagtggattggag 318  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25929365 ttgtaactcatttgtatcactttcatcttagtggattggag 25929405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 34491226 - 34491300
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  34491226 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 34491300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 46860488 - 46860562
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| || ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  46860488 aaaatgggtagaaattaggt-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 46860562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 5236790 - 5236653
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtga 103  Q
    ||||||||||||  ||| ||||||||||||  | |||||||||||||  |||||||   | | |||||||||| |||||||||||| |||||||    ||    
T  5236790 tatttaagtgttcttgtgcagattttgaagtggggcttgaagagagagaaacttgggaaatcgaaggaggtaactttagggttgagggtctttgattaga 5236691  T
Q  104 ggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    | | ||||| |||||||||||||||||||||||||||||    
T  5236690 gtt-ctcttgggttgggaaacattgtaaacaccttgggt 5236653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 9581297 - 9581370
Alignment:
Q  228 aaatgggtagaaattatgtcttgttctttgtgagctt--ttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||||||||||||||| || |||||||||||||||||  ||||||||||||||| |||| |||||||||| ||||    
T  9581297 aaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttttaacccatttgtatcccttt 9581370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 8477704 - 8477595
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| ||||| |||||| ||    |||||||||||||||||||| |||   ||||| |||||||  ||||||||||| |||    
T  8477704 agagcttagagagagaaacttggattacagaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcac 8477605  T
Q  136 cttgggtagt 145  Q
    ||||||||||    
T  8477604 cttgggtagt 8477595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 507
Target Start/End: Complemental strand, 27038262 - 27038158
Alignment:
Q  402 cttatcttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgatta 501  Q
    ||||||||  || ||||||||||||||||||| || | ||||||||| | ||   |||||| ||||||||||||||| | |||||||||  |||||||||    
T  27038262 cttatctttgtgctttgattatgcttgtggtgttgctctacacttagatctagatctgttt-ttgttgttgttgcttgaagacactttacacattgatta 27038164  T
Q  502 ccattt 507  Q
    ||||||    
T  27038163 ccattt 27038158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 29810763 - 29810839
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||||||||||||||||||||||| ||||||| | |   || || || |||||||||||||||||||||||||||||    
T  29810763 caaaggaggtaattttagggttgagggtctttg-attagagttcttttgggttgggaaacattgtaaacaccttgggt 29810839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 32890998 - 32891074
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||| |||||||||||| ||||||| | |  ||| ||||| || ||||||||||||||||||||||||||    
T  32890998 caaaggaggtaactttagggttgagggtctttg-attagggttctcttggggtgggaaacattgtaaacaccttgggt 32891074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 39153634 - 39153558
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggt 142  Q
    |||||||||||| |||||||||||| |||||||    ||| | ||||| |||||||||||||||||||||||||||||    
T  39153634 caaaggaggtaactttagggttgagggtctttgattagagtt-ctcttgggttgggaaacattgtaaacaccttgggt 39153558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 4569966 - 4570040
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||| |||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  4569966 aaaatgggtagaaattaggg-ttgttcattgtgagcttattgaagctaatttcttgtaactcatttgtatctcttt 4570040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 29196541 - 29196466
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||| ||| |||||||||| ||||    
T  29196541 aaaatgggtagaaattagggtttgttctttgtgagcttgtcaaagctaatttcttggaacccatttgtatctcttt 29196466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 29812916 - 29813034
Alignment:
Q  26 agattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    ||||||||||| |||| |||||||||||  |||||||   | |||||||||||| |||||||||||| ||||||| | | | || ||||| |||||||||    
T  29812916 agattttgaagaagaggttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg-attaaagttctcttgggttgggaa 29813014  T
Q  123 acattgtaaacaccttgggt 142  Q
     |||||||||||| ||||||    
T  29813015 gcattgtaaacacattgggt 29813034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 5260639 - 5260522
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||| |||||||||||||||  |||||||   | ||||||||| || ||||||||| || |||||||    ||| | ||||| ||||||||    
T  5260639 cagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttagggtctttgattagagtt-ctcttgggttggga 5260541  T
Q  122 aacattgtaaacaccttgg 140  Q
    |||||||||||||||||||    
T  5260540 aacattgtaaacaccttgg 5260522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 40735278 - 40735352
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgg 140  Q
    |||||||||||| |||||||||||| ||||||| | | | || ||||| |||| ||||||||||||||||||||||    
T  40735278 caaaggaggtaactttagggttgagggtctttg-attaaagttctcttgggttaggaaacattgtaaacaccttgg 40735352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 8738820 - 8738929
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| || ||||||||| ||     ||||||||||||||||||| |||   ||||| |||||||  ||||||||||| |||    
T  8738820 agagcttagagagagaaacttggattgcaaaggagggaaccaatgggttgagtgtctttgtagagagtatctcttgggttgggaaaaacattgtaatcac 8738919  T
Q  136 cttgggtagt 145  Q
    ||||||||||    
T  8738920 cttgggtagt 8738929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 51398667 - 51398783
Alignment:
Q  26 agattttgaaggagagcttgaagaga--gaaacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    |||||||||||||||| |||||||||  |||||||||   | |||||||||||| |||||||||||| ||||||| | |   ||  |||| |||||||||    
T  51398667 agattttgaaggagaggttgaagagatagaaacttgggaaatcaaaggaggtaactttagggttgagagtctttg-attagagttttcttgggttgggaa 51398765  T
Q  123 acattgtaaacaccttgg 140  Q
    | ||||||||||||||||    
T  51398766 atattgtaaacaccttgg 51398783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 51398826 - 51398902
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| |  |||||||| |||| ||| |  ||||||||||||||||||||||||||||| ||||    
T  51398826 gaaaaatgggtagaaattaggg-ttgttcttagtgaacttgttgaagctaatttcttgtaactcatttgtatctcttt 51398902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 507
Target Start/End: Complemental strand, 27026917 - 27026813
Alignment:
Q  402 cttatcttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgatta 501  Q
    ||||||||  || ||||||||||||||||||| || | ||||||||| | || | |||||| || ||||||||||||   |||||||||  |||||||||    
T  27026917 cttatctttgtgctttgattatgcttgtggtgttgctctacacttagatctaggtctgttt-ttcttgttgttgcttggagacactttacacattgatta 27026819  T
Q  502 ccattt 507  Q
    ||||||    
T  27026818 ccattt 27026813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 5236610 - 5236536
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| |||||||||| ||||    
T  5236610 aaaatgggtagaaattaggg-ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt 5236536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 7167585 - 7167475
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaa---cattgtaaaca 134  Q
    |||||||  |||||||||||||| | |||||||||| ||    |||||||||||||||||| | |||   ||||| ||||||||||   |||||||| ||    
T  7167585 agagcttagagagagaaacttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaaacattgtaatca 7167486  T
Q  135 ccttgggtagt 145  Q
    |||||||||||    
T  7167485 ccttgggtagt 7167475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 30236139 - 30236213
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  ||||||||||||||||||  ||||||||| ||||    
T  30236139 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctcttt 30236213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 40734512 - 40734586
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||||||| |  || ||||||||||||||| |||||||||| ||||    
T  40734512 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaacctaatttcttgtaacacatttgtatcccttt 40734586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 288
Target Start/End: Complemental strand, 43403899 - 43403837
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcat 288  Q
    ||||||||||||||||| | |||||||||||||||||| |  ||||| ||||||||||||||||    
T  43403899 aaaatgggtagaaattagg-cttgttctttgtgagcttgttgaagctcatttcttgtaactcat 43403837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 46173371 - 46173445
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||| ||||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  46173371 aaaattggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 46173445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 31340335 - 31340281
Alignment:
Q  248 ttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||| ||||||||||||||||| ||||    
T  31340335 ttgttctttgtgagcttgttgaagctaatttcatgtaactcatttgtatctcttt 31340281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 142
Target Start/End: Original strand, 9581220 - 9581254
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||| |||||||||||||||||||||||||||||    
T  9581220 ctcttgggttgggaaacattgtaaacaccttgggt 9581254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 19684120 - 19684086
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||| |||||||||||||||||||||||||||||    
T  19684120 ctcttgggttgggaaacattgtaaacaccttgggt 19684086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 142
Target Start/End: Original strand, 29682296 - 29682330
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||| |||||||||||||||||||||||||||||    
T  29682296 ctcttgggttgggaaacattgtaaacaccttgggt 29682330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 43401956 - 43401892
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcattt 290  Q
    ||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||    
T  43401956 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacgcattt 43401892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 142
Target Start/End: Original strand, 44331482 - 44331516
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgggt 142  Q
    ||||| |||||||||||||||||||||||||||||    
T  44331482 ctcttgggttgggaaacattgtaaacaccttgggt 44331516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 49199624 - 49199560
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcattt 290  Q
    ||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||    
T  49199624 aaaatgggtagaaattaagg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccattt 49199560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 141
Target Start/End: Original strand, 16498967 - 16499000
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttggg 141  Q
    ||||||||||| ||||||||||||||||||||||    
T  16498967 ctcttaggttgagaaacattgtaaacaccttggg 16499000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 313
Target Start/End: Complemental strand, 21156685 - 21156489
Alignment:
Q  116 ttgggaaacattg-taaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattga-gagt 213  Q
    ||||||||||||| |||||||||| | || | | ||||||  |||| || |||||||||||||  ||| |||||||  |||||| || ||||| | ||||    
T  21156685 ttgggaaacattggtaaacaccttagttaatgagatttcattattgaaaagatcaaaaagcttgctttagtgtttt--ctcttaggaatcatttatgagt 21156588  T
Q  214 gtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaa-ctcatttgtatcactttcatcttagtgga 312  Q
    ||   || ||| |||||||| ||||||| |  | ||||||||||||| ||||||||||||||| || ||| ||| ||||||||| ||| ||| |||||||    
T  21156587 gtttatgactt-aaaaatggatagaaataagattttgttctttgtgaacttttaagctaattttttttaatctc-tttgtatcagttttatcatagtgga 21156490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 504
Target Start/End: Complemental strand, 40844611 - 40844523
Alignment:
Q  415 tttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    ||||||||||||||| ||| || | ||||||||| |||| |  ||||| |||||||||||||||   ||||||||||  |||||||||||    
T  40844611 tttgattatgcttgtagtgttgctctacacttagatttaggtttgttt-ttgttgttgttgcttggagacactttatctattgattacca 40844523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 2075188 - 2075156
Alignment:
Q  250 gttctttgtgagcttttaagctaatttcttgta 282  Q
    ||||||||||||||||||||||||||| |||||    
T  2075188 gttctttgtgagcttttaagctaatttattgta 2075156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Complemental strand, 5258375 - 5258343
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgg 140  Q
    ||||| |||||||||||||||||||||||||||    
T  5258375 ctcttgggttgggaaacattgtaaacaccttgg 5258343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 138
Target Start/End: Original strand, 5373118 - 5373191
Alignment:
Q  65 caaaggaggtaattttagggttgagtgtctttgtagtg-aggtactcttaggttgggaaacatt-gtaaacacctt 138  Q
    |||||||||||| |||| ||||||| |||||||  ||| |||| ||||| |||||||||||||| |||||||||||    
T  5373118 caaaggaggtaactttaaggttgagagtctttg--gtgaaggttctcttgggttgggaaacattggtaaacacctt 5373191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 7762279 - 7762353
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||| |||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||||| |||||||| ||||    
T  7762279 aaaaagggtagaaattaggg-ttgttctttgtgaacttgttgaagctaatttcttgtaactcttttgtatctcttt 7762353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 19684043 - 19683969
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  ||||||||||||| ||| |  |||||||||||||||||| | |||||||| ||||    
T  19684043 aaaatgggtagaaattaggg-ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt 19683969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 502
Target Start/End: Complemental strand, 21156422 - 21156302
Alignment:
Q  383 ttgttttctttcttgctttcttatctt-gttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaag 481  Q
    |||||||||| | | |||||||||||| |||| ||||| ||| ||| ||||| ||||| || ||||| | || |  |||||||| || ||||||||||||    
T  21156422 ttgttttcttcccttctttcttatctttgttgctttgaatattcttatggtgttgtttcactcttagatctaggtttgtttgttatttttgttgcttaag 21156323  T
Q  482 gacactttattcattgattac 502  Q
       |||||| |||||||||||    
T  21156322 actactttactcattgattac 21156302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Complemental strand, 23198168 - 23198136
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgg 140  Q
    ||||| |||||||||||||||||||||||||||    
T  23198168 ctcttgggttgggaaacattgtaaacaccttgg 23198136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Complemental strand, 23200367 - 23200335
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgg 140  Q
    ||||| |||||||||||||||||||||||||||    
T  23200367 ctcttgggttgggaaacattgtaaacaccttgg 23200335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 300
Target Start/End: Complemental strand, 35138864 - 35138786
Alignment:
Q  223 ttgaaaaatgggtagaaattatgtcttgttctttgtgagct--tttaagctaatttcttgtaactcatttgtatcacttt 300  Q
    |||| ||||||||||||||||||| |||||||| ||||| |  || ||| |||||||||| ||||| |||||||| ||||    
T  35138864 ttgagaaatgggtagaaattatgt-ttgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctcttt 35138786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 44331413 - 44331473
Alignment:
Q  30 tttgaaggagagcttga-agagagaaacttggttta-caaaggaggtaattttagggttga 88  Q
    ||||||||||||||||| ||||||||||||||   | |||||||||||| |||||||||||    
T  44331413 tttgaaggagagcttgagagagagaaacttgggaaatcaaaggaggtaactttagggttga 44331473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 44331559 - 44331633
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||| |||||||||| |  |||||||||||||||||  |||||||||| ||||    
T  44331559 aaaatgggtagaaattaggg-ttgttcattgtgagcttgttgaagctaatttcttgtaagccatttgtatctcttt 44331633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 44700632 - 44700558
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||| |  |||||||||||||| || |  ||||||||||||||||||  ||||||||| ||||    
T  44700632 aaaatgggtagaaattaggg-ttgttctttgtgagtttgttgaagctaatttcttgtaacctatttgtatctcttt 44700558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Original strand, 45095102 - 45095134
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgg 140  Q
    ||||| |||||||||||||||||||||||||||    
T  45095102 ctcttgggttgggaaacattgtaaacaccttgg 45095134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 163; Significance: 8e-87; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 25 - 475
Target Start/End: Complemental strand, 6033 - 5583
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    |||||||||||||||||||||||||||||  || |||| ||||||||||||||| |||| |||||||||||||||||||||||  ||||| |||||| ||    
T  6033 cagattttgaaggagagcttgaagagagagaaaattggattacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttggcaa 5934  T
Q  123 acattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgat---tcattgagagtgtgggt 219  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||  |||||||||| |||   |||||||||||||||||    
T  5933 acattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtg--ttttctcttaggattcatcattgagagtgtgggt 5836  T
Q  220 ggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggag 318  Q
    | |    |||||| |||||||||| ||||||||||| ||| ||||| ||||||||||||||||| ||| |||||| |||||||||| |||||||||| ||    
T  5835 gac--acaaaatgagtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtatctcttttgtaacactttcatcatagtggattgaag 5738  T
Q  319 ggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgat 415  Q
    ||||||||| |       ||| ||||||||||||||||||| |||||  || |||||| ||||||||| || ||||||| | || |||||| || ||| |    
T  5737 ggctgctctct--cccccagattaggtcatattggaccgaactgggtcaacaatcttg-gtgtgtttg-ttcctttctttcattgcttatctttattgct 5642  T
Q  416 ttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttg 475  Q
    |||||||||||||||||| |  | ||||||||| | || | |||||| ||||||||||||    
T  5641 ttgattatgcttgtggtgtttctctacacttagatctaggtctgttt-ttgttgttgttg 5583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 11 - 491
Target Start/End: Complemental strand, 2855 - 2376
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagagaga-aacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtact 109  Q
    ||||||||  ||| ||||||||||||||||||||||||||||| || |||| |||||||  |||||| ||||||||| ||| ||||||||||||||  ||    
T  2855 taagtgttcttgtgcagattttgaaggagagcttgaagagagagaaattggattacaaaaaaggtaactttagggttaagtttctttgtagtgaggatct 2756  T
Q  110 cttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgat---tcat 206  Q
    ||| |||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||| |||||||  |||| ||||| |||   ||||    
T  2755 cttgggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattggaaggatcaaaaagcttccttttgtg--ttttatcttaggattcatcat 2658  T
Q  207 tgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatct 305  Q
    |||||||||||||| |    |||||||||||||||||  |||||||||| ||| ||||| |||||||||||||| ||| || |||||| ||||||||||     
T  2657 tgagagtgtgggtgac--acaaaatgggtagaaattagttcttgttcttgtgtaagcttataagctaatttcttataattcttttgtaacactttcatca 2560  T
Q  306 tagtggattggagggctgctctttnnnnnnnagagtaggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttct 403  Q
    |||||||||||||||||||| | |       ||| |||||||||||||| |||| |||||  || |||||| ||||||||| || ||||||| | || ||    
T  2559 tagtggattggagggctgctgtct--cccccagattaggtcatattggagcgaactgggtcaacaatcttg-gtgtgtttg-ttcctttctttcattgct 2464  T
Q  404 tatc-ttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttat 491  Q
    |||| || ||| ||||||||||||||||||| |||| ||||||||| | || | |||||| |||||||||||||||   ||||||||||    
T  2463 tatctttattgctttgattatgcttgtggtgttgttctacacttagatctaggtctgttt-ttgttgttgttgcttggagacactttat 2376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 133014 - 133331
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| || |||||| |||||||||| |||||  |||||||||| |||||||||||| || ||||||||||||| ||||||||||||||  |    
T  133014 taagtgttcttgtgcaaattttggaggagagcttaaagagagagaaacttggattacaaaggagggaactttagggttgagtttctttgtagtgaggatc 133113  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---a 205  Q
    |||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| |||||||| || ||| ||| | |||   |    
T  133114 tcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctct-ttagggttcatta 133211  T
Q  206 ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcactttcat 303  Q
    ||||||| |||||   |   | |||||||||||||||| ||||||||||| ||| || ||  ||||||  ||||||||||||| |||||| || ||||||    
T  133212 ttgagagagtgggaaac---acaaatgggtagaaattaggtcttgttcttgtgtaagtttgcaagctatttttcttgtaactc-tttgtaacattttcat 133307  T
Q  304 cttagtggattggagggctgctct 327  Q
    | ||||||||||||| ||||||||    
T  133308 catagtggattggagagctgctct 133331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 141
Target Start/End: Complemental strand, 149328 - 149295
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttggg 141  Q
    ||||||||||| ||||||||||||||||||||||    
T  149328 ctcttaggttgagaaacattgtaaacaccttggg 149295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 148; Significance: 7e-78; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 47 - 504
Target Start/End: Complemental strand, 23857 - 23401
Alignment:
Q  47 agagagaaacttg-gtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaacaccttgggtagt 145  Q
    ||||||||||||| | |||||| |||||||| |||| ||||||| |||||| ||||||||| || || |||||| ||| ||||||| |||||||||||||    
T  23857 agagagaaacttgagattacaatggaggtaactttaaggttgagcgtctttatagtgaggttctattgggttggaaaaaattgtaatcaccttgggtagt 23758  T
Q  146 tacatttcaccattggaaggatcaaaaag-cttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattat 244  Q
     | || |||||||| ||||||| |||||| | ||||||||||||||  |||||| ||||||||| |||||||  || | |||||| |||||||||||||     
T  23757 gagatgtcaccattagaaggataaaaaaggcatcattttgtgtttt--ctcttaggattcattgtgagtgtgtctgacatgaaaa-tgggtagaaattag 23661  T
Q  245 gtcttgttctttgtgagcttttaagctaatttcttgtaactca----tttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagag 340  Q
     ||||||| ||||||||||| ||||  |||||||||||| | |    ||||||||||||||||||||||| ||||||  |||  |||||       | ||    
T  23660 atcttgttttttgtgagcttctaagaaaatttcttgtaattaacctatttgtatcactttcatcttagtgaattggatagct--tctttctcccctaaag 23563  T
Q  341 taggtcatattggaccgaattgggttaccatcttgtgtgtgtttgttttctttcttgctttcttatcttgttgatttgat--tatgcttgtggtgatgtt 438  Q
    ||||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||| || |    
T  23562 taggtcatattggaccgaactaggttaccatcttg-gt-tgtttgttttctttcttgctttcttatcttgttgctttaattatatgcttgtggtgttgct 23465  T
Q  439 ttacacttagttttaagactgtttgttgttgttgttgcttaaggacactttattcattgattacca 504  Q
    |||||||||||||||  ||||||  |||||||| |||||| |||| | |||| |||||||||||||    
T  23464 ttacacttagttttataactgtt--ttgttgttattgcttgaggatattttactcattgattacca 23401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 377 - 504
Target Start/End: Complemental strand, 43262 - 43128
Alignment:
Q  377 gtgtgtttgttttctttcttgctttcttatcttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgt-------ttgttgttg 469  Q
    |||| ||||| ||||||||| |||| ||||||||||| ||||||||||||||||||| || ||||||| |||||||   |||||       |||||||||    
T  43262 gtgtatttgtcttctttcttacttttttatcttgttgctttgattatgcttgtggtgttgctttacacatagtttttgaactgttttgttgttgttgttg 43163  T
Q  470 ttgttgcttaaggacactttattcattgattacca 504  Q
    |||||| || |||| |||||| |||||||||||||    
T  43162 ttgttggttgaggatactttactcattgattacca 43128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 137; Significance: 3e-71; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 11 - 327
Target Start/End: Complemental strand, 86045 - 85729
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaag--agagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||  ||| |||||||||||||| |||||||||  |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |    
T  86045 taagtgttcttgtgcagattttgaaggatagcttgaagtgagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatc 85946  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--at 206  Q
    |||| |||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||| |||| ||||||| |||||||||||  ||||  ||    
T  85945 tcttgggttgggaaacattgtaaacactttgggtagtgagatttcaccattggaaggatcaaaaa-cttccttttgtg-tttttctcttagaattcatat 85848  T
Q  207 tgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatct 305  Q
    || | | ||||| | |    ||||||||||||||||| |||||| |||| ||| ||||||||||||||||||||||||||| |||||| ||||||||||     
T  85847 tgtgggagtgggagac--acaaaatgggtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatca 85751  T
Q  306 tagtggattggagggctgctct 327  Q
    | ||||||||||| || |||||    
T  85750 tggtggattggagagccgctct 85729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 129; Significance: 2e-66; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 47 - 478
Target Start/End: Complemental strand, 11058 - 10625
Alignment:
Q  47 agagagaaactt-ggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctta--ggttgggaaacattgtaaacaccttgggta 143  Q
    |||||||||||| ||  |||||||||||||| |||| |||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||||||    
T  11058 agagagaaactttggaatacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggta 10959  T
Q  144 gttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcat-tga-gagtgtgggtggcttgaaaaatgggtagaaat 241  Q
    || | |||||||||||||||||||||||||||||| |||| | | |||||||||| ||||||| | | ||| ||||||| |    ||||| | |||||||    
T  10958 gtgagatttcaccattggaaggatcaaaaagcttc-ttttttctgttttctcttaggattcatatcatgagagtgggtgac--acaaaatagatagaaat 10862  T
Q  242 tatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctctttnnnnnnnagag 340  Q
    || ||||||||||| ||| ||||| ||| ||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||| |       | |     
T  10861 taggtcttgttcttgtgtaagcttgtaaactaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctct--cccccaaat 10764  T
Q  341 taggtcatattggaccgaattgggt-taccatcttgtgtgtgtttgttttctttcttgc-tttcttatc-ttgttgatttgattatgcttgtggtgatgt 437  Q
    ||||||||||||||||||| |||||  |  |||||| ||||||||| || || |||| | || |||||| || ||| ||||||||||||||||||| ||     
T  10763 taggtcatattggaccgaactgggtcaataatcttg-gtgtgtttg-ttcctctctttcattgcttatctttattgctttgattatgcttgtggtgttgc 10666  T
Q  438 tttacacttagttttaagactgtttgttgttgttgttgctt 478  Q
    | ||||||||| |||| | |||||| |||||||||||||||    
T  10665 tctacacttagatttaggtctgttttttgttgttgttgctt 10625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 127; Significance: 2e-65; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 12 - 327
Target Start/End: Original strand, 36568 - 36883
Alignment:
Q  12 aagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtact 109  Q
    |||||||  ||| ||||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  ||    
T  36568 aagtgttcttgtgcagattttgaaggagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatct 36667  T
Q  110 cttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc---at 206  Q
    ||| |||||| ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| |||||||| || ||| ||| | |||   ||    
T  36668 cttgggttggaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctct-ttagggttcattat 36765  T
Q  207 tgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatct 305  Q
    |||||| |||||   |   | |||||||||||||| ||||||||||||| ||| |||||  |||||| ||||||||||||| |||||| ||||||||||     
T  36766 tgagagagtgggaaac---acaaatgggtagaaatcatgtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatca 36861  T
Q  306 tagtggattggagggctgctct 327  Q
    |||||| |||| | ||||||||    
T  36862 tagtgggttggcgagctgctct 36883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 11 - 327
Target Start/End: Original strand, 43696 - 44012
Alignment:
Q  11 taagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtac 108  Q
    ||||||||| ||| ||||||||| ||||||||| ||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |    
T  43696 taagtgtttttgtgcagattttggaggagagctggaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatc 43795  T
Q  109 tcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcatt- 207  Q
    | || |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| |||||||| || ||| ||| | ||||||     
T  43796 ttttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctct-ttagggttcatta 43893  T
Q  208 gagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatctt 306  Q
      ||| | | ||||    | |||||||||||||||| ||||||||||| | | |||||  |||||| ||||||||||||| |||||| |||||||||| |    
T  43894 ttgagagagagtgg-aacacaaatgggtagaaattaggtcttgttcttgtataagcttgcaagctattttcttgtaactc-tttgtaacactttcatcat 43991  T
Q  307 agtggattggagggctgctct 327  Q
    |||||||||||| ||||||||    
T  43992 agtggattggagagctgctct 44012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 7 - 327
Target Start/End: Original strand, 8148 - 8470
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaagag--agaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgag 104  Q
    ||||||||||||  ||| ||| ||| | ||||||||| ||||||  |||||||||| |||||||||||| || |||||||||||||||||||||||||||    
T  8148 tatttaagtgttcgtgtgcagttttcggaggagagctggaagagagagaaacttggattacaaaggagggaactttagggttgagtgtctttgtagtgag 8247  T
Q  105 gtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc 204  Q
    |  ||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||  ||||||||| |||||||| || ||| ||| | |||    
T  8248 gatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggat-taaaagcttccttttgtgtcttctcttttagggttc 8346  T
Q  205 ---attgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcactt 299  Q
       |||||||| |||||   |   | ||||  |||||||||| ||||||||||| ||| |||||  ||||||  ||||||||||||| |||||| |||||    
T  8347 attattgagagagtgggaaac---acaaatacgtagaaattaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaactc-tttgtaacactt 8442  T
Q  300 tcatcttagtggattggagggctgctct 327  Q
    ||||| ||||||||||||| ||||||||    
T  8443 tcatcatagtggattggagagctgctct 8470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 95; Significance: 3e-46; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 26 - 327
Target Start/End: Complemental strand, 17599 - 17309
Alignment:
Q  26 agattttgaaggagagcttgaa---gagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttgggaa 122  Q
    ||||||||||| | ||||||||   ||||||| ||||| ||||| ||||||||| |||| ||||||||||||||||||||  |  ||||| | |||||||    
T  17599 agattttgaagtatagcttgaaagagagagaaccttggattacataggaggtaactttacggttgagtgtctttgtagtggagatctcttggattgggaa 17500  T
Q  123 acattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggc 222  Q
    ||||||||||||||||||||||| | ||||||||          ||||||| |||| |||||||  |||||||||| |||||||| |||||||| ||| |    
T  17499 acattgtaaacaccttgggtagtgagatttcacc----------tcaaaaa-cttccttttgtg--ttttctcttaggattcattaagagtgtgagtgac 17413  T
Q  223 ttgaaaaatgggtagaaattatgtcttgttctt-tgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggc 321  Q
        ||||| ||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||| |||||| |||||||||| || ||||||||||||     
T  17412 --acaaaataggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcataatggattggagggt 17315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 18157 - 18083
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||| ||||||||||| |  |||||| |||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  18157 aaaattggtagaaattaggg-ttgttcattgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 18083  T

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Target: scaffold0098 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 7 - 187
Target Start/End: Complemental strand, 45565 - 45383
Alignment:
Q  7 tatttaagtgtttctgttcagattttgaaggagagcttgaagagaga--aacttggtttacaaaggaggtaattttagggttgagtgtcttt-gtagtga 103  Q
    ||||||||||||  ||| || |||||| |  ||||||||||||||||  ||||||| ||||||||||||||| ||||||||||| ||||||| |||||||    
T  45565 tatttaagtgttcttgtgcaaattttggaaaagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgaatgtcttttgtagtga 45466  T
Q  104 ggtactcttaggttgggaaacattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgt 187  Q
    ||  ||||| ||||| |||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| ||||||||    
T  45465 ggatctcttgggttgtgaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgt 45383  T

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Target: scaffold0188 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 38 - 327
Target Start/End: Original strand, 17712 - 18003
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| |||||||||||| || | ||||||||||||||||||||| ||||  ||||| |||||||  ||||||||||| |||    
T  17712 agagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaatcac 17811  T
Q  136 cttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--attgagagtgtgggtggcttgaaaaatgg 233  Q
    |||||||||| | ||||||||||||||||||||  |||||||| | |||||| || ||| ||| | |||  |||| ||| ||||  ||    | ||||||    
T  17812 cttgggtagtgagatttcaccattggaaggatc-taaagcttcctcttgtgtcttctcttttagggttcatattgtgagagtgg--ggaaacacaaatgg 17908  T
Q  234 gtagaaattatgtcttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    ||||||| |||| ||||||||| ||| |||||  ||||||  ||||||||||| | |||||| |||||||||| ||||||||||||| ||||||||    
T  17909 gtagaaactatgacttgttcttgtgtaagcttgcaagctatttttcttgtaac-cctttgtaacactttcatcatagtggattggagagctgctct 18003  T

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Target: scaffold0188; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 38 - 327
Target Start/End: Original strand, 23805 - 24096
Alignment:
Q  38 agagcttgaagagagaaacttggtttacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggg--aaacattgtaaacac 135  Q
    |||||||  |||||||||||||| |||||||||||| || | ||||||||||||||||||||| ||||  ||||| |||||||  ||||||||||| |||    
T  23805 agagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaatcac 23904  T
Q  136 cttgggtagttacatttcaccattggaaggatcaaaaagcttcattttgtgttttttctcttatgattc--attgagagtgtgggtggcttgaaaaatgg 233  Q
    |||||||||| | ||||||||||||||||||||  |||||||| | |||||| || ||| ||| | |||  |||| ||| ||||  ||    | ||||||    
T  23905 cttgggtagtgagatttcaccattggaaggatc-taaagcttcctcttgtgtcttctcttttagggttcatattgtgagagtgg--ggaaacacaaatgg 24001  T
Q  234 gtagaaattatgtcttgttctt-tgtgagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggagggctgctct 327  Q
    ||||||| |||| ||||||||| ||| |||||  ||||||  ||||||||||| | |||||| |||||||||| ||||||||||||| ||||||||    
T  24002 gtagaaactatgacttgttcttgtgtaagcttgcaagctatttttcttgtaac-cctttgtaacactttcatcatagtggattggagagctgctct 24096  T

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Target: scaffold0016 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 298
Target Start/End: Original strand, 102380 - 102516
Alignment:
Q  160 ggaaggatcaaaaagcttcattttgtgttttttctcttatgattcattgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtg 259  Q
    |||||||||||||||| || ||| |||||||  |||||   ||| |||  ||||||| ||| |||||||||||||||||||||| |  ||||| ||||||    
T  102380 ggaaggatcaaaaagcatcctttagtgtttt--ctcttcgaatttattatgagtgtgtgtgacttgaaaaatgggtagaaattagggtttgttttttgtg 102477  T
Q  260 agcttttaagctaatttcttgtaactcatttgtatcact 298  Q
    |||||||||| ||||||||||||||   |||||||||||    
T  102478 agcttttaagataatttcttgtaacctctttgtatcact 102516  T

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Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Original strand, 114540 - 114572
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgg 140  Q
    ||||| |||||||||||||||||||||||||||    
T  114540 ctcttgggttgggaaacattgtaaacaccttgg 114572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 377 - 504
Target Start/End: Original strand, 29582 - 29716
Alignment:
Q  377 gtgtgtttgttttctttcttgctttcttatcttgttgatttgattatgcttgtggtgatgttttacacttagttttaagactgt-------ttgttgttg 469  Q
    |||| ||||| ||||||||| |||| ||||||||||| ||||||||||||||||||| || ||||||| |||||||   |||||       |||||||||    
T  29582 gtgtatttgtcttctttcttacttttttatcttgttgctttgattatgcttgtggtgttgctttacacatagtttttgaactgttttgttgttgttgttg 29681  T
Q  470 ttgttgcttaaggacactttattcattgattacca 504  Q
    |||||| || |||| |||||| |||||||||||||    
T  29682 ttgttggttgaggatactttactcattgattacca 29716  T

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Target: scaffold0002 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 298
Target Start/End: Complemental strand, 14868 - 14757
Alignment:
Q  189 ttttctcttatgattca--ttgagagtgtgggtggcttgaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactc 286  Q
    |||||||||| ||||||  ||| ||||||||||| |||||||||| ||||| || || |  | ||||||||||||||||||||||||||||| |||||      
T  14868 ttttctcttaggattcactttgtgagtgtgggtgacttgaaaaataggtaggaactagggttagttctttgtgagcttttaagctaatttctcgtaacct 14769  T
Q  287 atttgtatcact 298  Q
     |||||||||||    
T  14768 ctttgtatcact 14757  T

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Target: scaffold0466 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 7339 - 7415
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||||||| |||||||||| ||||    
T  7339 gaaaaatgggtagaaattaagg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 7415  T

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Target: scaffold0477 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 5745 - 5794
Alignment:
Q  63 tacaaaggaggtaattttagggttgagtgtctttgtagtgaggtactctt 112  Q
    |||||||||||||| || |||||||||||||||||||||||||| |||||    
T  5745 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctctt 5794  T

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Target: scaffold0066 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 20731 - 20612
Alignment:
Q  25 cagattttgaaggagagcttgaagagaga--aacttggttta-caaaggaggtaattttagggttgagtgtctttgtagtgaggtactcttaggttggga 121  Q
    ||||||||||||||||||| |||||||||  ||||| |   | |||||||||||| |||||||||||| |||||||    ||| || |||| ||||||||    
T  20731 cagattttgaaggagagctagaagagagagaaactttggaaatcaaaggaggtaactttagggttgagggtctttgattagagtta-tcttgggttggga 20633  T
Q  122 aacattgtaaacaccttgggt 142  Q
     ||||||||||||||||||||    
T  20632 gacattgtaaacaccttgggt 20612  T

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Target: scaffold0219 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 27591 - 27523
Alignment:
Q  234 gtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||| ||||||||   |||||| |  ||||||||||||||||||||||||||||| ||||    
T  27591 gtagaaattatgtattgttcttgaagagcttgttgaagctaatttcttgtaactcatttgtatctcttt 27523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 225 - 314
Target Start/End: Original strand, 15937 - 16026
Alignment:
Q  225 gaaaaatgggtagaaattatgtcttgttctttgtgagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggatt 314  Q
    ||||||||||   |||||| || |||||||||||| | ||||||||||||||||||||||   ||||||| ||| | ||| |||||||||    
T  15937 gaaaaatgggggaaaattaggttttgttctttgtgggtttttaagctaatttcttgtaacatctttgtataactcttatcatagtggatt 16026  T

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Target: scaffold0286 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 300
Target Start/End: Original strand, 11591 - 11645
Alignment:
Q  248 ttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatcacttt 300  Q
    ||||||||||||| ||| |  ||||||||||||||||||||||||||||| ||||    
T  11591 ttgttctttgtgaacttgtcaaagctaatttcttgtaactcatttgtatctcttt 11645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 80437 - 80368
Alignment:
Q  227 aaaatgggtagaaattatgtcttgttctttgtgagctttt--aagctaatttcttgtaactcatttgtatc 295  Q
    ||||||||||||||||| |  ||||||||||||||||| |  |||||||||||||| ||| ||||||||||    
T  80437 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgcaacccatttgtatc 80368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Original strand, 854 - 886
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgg 140  Q
    ||||| |||||||||||||||||||||||||||    
T  854 ctcttgggttgggaaacattgtaaacaccttgg 886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 140
Target Start/End: Complemental strand, 11392 - 11360
Alignment:
Q  108 ctcttaggttgggaaacattgtaaacaccttgg 140  Q
    ||||| |||||||||||||||||||||||||||    
T  11392 ctcttgggttgggaaacattgtaaacaccttgg 11360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 33372 - 33428
Alignment:
Q  78 tttagggttgagtgtctttgtagtgaggtactcttaggttgggaaacattgtaaaca 134  Q
    ||||||||||| |||||||||||||| |  ||||| |||||| ||||||| ||||||    
T  33372 tttagggttgaatgtctttgtagtgacgatctcttgggttggaaaacattataaaca 33428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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