View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11386_high_3 (Length: 714)
Name: NF11386_high_3
Description: NF11386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11386_high_3 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 640; Significance: 0; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 640; E-Value: 0
Query Start/End: Original strand, 1 - 692
Target Start/End: Original strand, 52350466 - 52351153
Alignment:
| Q |
1 |
agtggtggtggaagtatataagaataaacaagttgactcaatgttcttcaaacatgtctgcttttttattctaatcaataccaaattttggaatgtgcgc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
52350466 |
agtggtggtggaagtatataagaataaacaagttgactcaatgttcttcaaacatgtctgcttttttattctattcaataccaaattttggaatgtgcgc |
52350565 |
T |
 |
| Q |
101 |
tattttgtcatagtcctcccctgttccttcattacatcgctcctttaatgttgggcaatcacaaatagtcagtacctcaagtgaagtgagatttcgaata |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52350566 |
tattttgtcatagtcctcccctgttccttcattacatcgctcctttaatgttgggcaatcacaaatagtcagtacctcaagtgaagtgagatttcgaata |
52350665 |
T |
 |
| Q |
201 |
cattctggcaaggatctcaatccacaactagatatttcaattgtttgaagggattgaagaccttccaacatttgctccggtgaagactcaaggtcaccac |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52350666 |
cattctggcaaggatctcaatccacaactagatatttcaattgttcgaagggattgaagaccttccaacatttgctccggtgaagactcaaggtcaccac |
52350765 |
T |
 |
| Q |
301 |
aacgagaaa-ttgcagacgttctaaagccaggcttaagggttcatttggtagttcctttaatttcgggaaattagttagtataagagtttgcagacaagt |
399 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52350766 |
aacgagaaatttgcagacgttctaaagccaggcttaagggttcatttggtagttcctttaatttcgggaaattagttagtataagagtttgcagacaagt |
52350865 |
T |
 |
| Q |
400 |
caagtttctcaacatgccttctggaaaggatgtcattttgttaccttcactaagcagaagggtggtaagacaatggaaactagatattggccttagtaac |
499 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52350866 |
caagtttctcaacatgccttctggaaaggatgtcattttgttaccttcactaagcagaagggtggtaagacaatggaaactagatattggccttagtaac |
52350965 |
T |
 |
| Q |
500 |
tcactgttacatccaattacaatgaggtctttaagggatggaaggaattgcaacacaagtttagggcaaccacaaatggtcaaatcagaaagacgaggga |
599 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
52350966 |
tgactgttacatccaattacaatgaggtctttaagggatggaaggaattgcaacacaagtttagggcaaccacaaatggtcaaatcagaaagac---gga |
52351062 |
T |
 |
| Q |
600 |
acatctcccccctttccattttcaataaccgttcaaagtttggcaaacctagtaacgagacactttttccagagatgggaaaaccctcacccc |
692 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
52351063 |
acatctcccgcctttccattttcaataaccgttcaaagtttggcaaacctagtaatgag--actttttccagagatgggaaaaccctcacccc |
52351153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 223
Target Start/End: Complemental strand, 20304076 - 20303938
Alignment:
| Q |
84 |
aattttggaatgtgcgctattttgtcatagtcctcccctgttccttcattacatcgctcctttaatgttgggcaatcacaaatagtcagtacctcaagtg |
183 |
Q |
| |
|
||||||||||| |||||||| ||||| | ||||| |||||||| || || || ||||||||||||||||| ||| ||||| ||| |||||||||| |
|
|
| T |
20304076 |
aattttggaatatgcgctatcttgtccaa-tcctcgcctgttcccgtcttgcaccgttcctttaatgttgggcattcataaatactcaaaacctcaagtg |
20303978 |
T |
 |
| Q |
184 |
aagtgagatttcgaatacattctggcaaggatctcaatcc |
223 |
Q |
| |
|
||||||| |||||||| ||| |||||| |||||||||| |
|
|
| T |
20303977 |
aagtgaggaatcgaataccttcaggcaagcatctcaatcc |
20303938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 86 - 212
Target Start/End: Complemental strand, 20298193 - 20298067
Alignment:
| Q |
86 |
ttttggaatgtgcgctattttgtcatagtcctcccctgttccttcattacatcgctcctttaatgttgggcaatcacaaatagtcagtacctcaagtgaa |
185 |
Q |
| |
|
||||||||| || ||||| ||||| | |||||||||||||| || || ||||| ||||||||| ||||||| || |||||||| | |||||| ||| |
|
|
| T |
20298193 |
ttttggaatatgagctatcttgtcccaatcctcccctgttccctctttgcatcgtaactttaatgtggggcaataaccgatagtcagaagctcaagagaa |
20298094 |
T |
 |
| Q |
186 |
gtgagatttcgaatacattctggcaag |
212 |
Q |
| |
|
||||| | | |||| | |||||||||| |
|
|
| T |
20298093 |
gtgaggtgttgaatgccttctggcaag |
20298067 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 90; Significance: 4e-43; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 84 - 603
Target Start/End: Original strand, 30473961 - 30474484
Alignment:
| Q |
84 |
aattttggaatgtgcgctattttgtcatagtcctcccctgttccttcattacatcgctcctttaatgttgggcaatcacaaatagtcagtacctcaagtg |
183 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||| || ||||||| || ||||||||||||||||||||||| | | ||| ||| | |||||||| |
|
|
| T |
30473961 |
aattttggaatgtgcgctatcttgtcccagtcctcaccggttcctttcttcaatcgctcctttaatgttgggcaacctcgaattttcaaaaactcaagtg |
30474060 |
T |
 |
| Q |
184 |
aagtgagatttcgaatacattctggcaaggatctcaatccacaactagat---atttcaattgtttgaagggattgaagaccttccaacatttgctccgg |
280 |
Q |
| |
|
||||||| | | ||||| |||| || |||||||||||||| | || | | || ||||| ||| |||| ||| ||||||||||| | |||| ||||| |
|
|
| T |
30474061 |
aagtgaggtgttgaatagattcgggaaaggatctcaatcctccacaataaccaatatcaatagttcgaagagatcgaagaccttcccatgtttgttccgg |
30474160 |
T |
 |
| Q |
281 |
tgaagactcaaggtcaccacaacgagaaattg-cagacgttctaaagccaggcttaagggttcatttggtagttcctttaatttcgggaaattagttagt |
379 |
Q |
| |
|
| ||||||||| ||||||||| ||| || ||||| || || | ||| | ||||||||||||||||||| ||| ||||| |||||||||| | | |
|
|
| T |
30474161 |
tatagactcaagctcaccacaagaagagatactcagacactccaacactaggttgaagggttcatttggtagtttcttcaattttgggaaattagaaatt |
30474260 |
T |
 |
| Q |
380 |
ataagagtttgcagacaagtcaagtttctcaacatgccttctggaaaggatgtcattttgttaccttcactaagcagaagggtggtaagacaatggaaac |
479 |
Q |
| |
|
| | | || | ||||||||||||||||| |||| || || |||||| | ||| | | ||| | | ||| ||||||||||||||| | |||| |
|
|
| T |
30474261 |
ttcaaacttcgaagacaagtcaagtttcttaacaaaccgtcaggaaagcaaatcacgtcttcaccgttaagaaggtgaagggtggtaagactacagaaat |
30474360 |
T |
 |
| Q |
480 |
tagatattggccttagtaactcactgttacatccaattacaatgaggtctttaagggatggaaggaattgcaacacaagtttagggcaaccacaaatggt |
579 |
Q |
| |
|
| || |||| || ||||||||| |||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||| |
|
|
| T |
30474361 |
tggagattgatctcagtaactcattgttacatccaaatacaatgaggtctttaagggatggaaggcatggcaacacaagtttagggcaatcaataatggt |
30474460 |
T |
 |
| Q |
580 |
caaatcagaaagacgagggaacat |
603 |
Q |
| |
|
||||| ||||||| || ||||||| |
|
|
| T |
30474461 |
caaattagaaagaagaaggaacat |
30474484 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 223
Target Start/End: Original strand, 30481989 - 30482126
Alignment:
| Q |
86 |
ttttggaatgtgcgctattttgtcatagtcctcccctgttccttcattacatcgctcctttaatgttgggcaatcacaaatagtcagtacctcaagtgaa |
185 |
Q |
| |
|
||||||||| || ||||| ||||| | ||||||| |||||| || || ||||| |||| |||||||||||| || ||||| ||||| |||||||| ||| |
|
|
| T |
30481989 |
ttttggaatatgagctatcttgtcccaatcctcccatgttccctctttgcatcgttcctctaatgttgggcattcccaaattgtcagaacctcaagagaa |
30482088 |
T |
 |
| Q |
186 |
gtgagatttcgaatacattctggcaaggatctcaatcc |
223 |
Q |
| |
|
||||| | |||||||| || |||||| ||| |||||| |
|
|
| T |
30482089 |
gtgaggtgtcgaataccctccggcaagcatcgcaatcc |
30482126 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 190
Target Start/End: Original strand, 30398671 - 30398775
Alignment:
| Q |
86 |
ttttggaatgtgcgctattttgtcatagtcctcccctgttccttcattacatcgctcctttaatgttgggcaatcacaaatagtcagtacctcaagtgaa |
185 |
Q |
| |
|
||||||||| || ||||| ||||| | |||||||||||||| || || ||||| ||||||||||||||||||||| || ||||| |||||||| ||| |
|
|
| T |
30398671 |
ttttggaatatgagctatcttgtcccaatcctcccctgttccctctttgcatcgttcctttaatgttgggcaatcattgattgtcagaacctcaagagaa |
30398770 |
T |
 |
| Q |
186 |
gtgag |
190 |
Q |
| |
|
||||| |
|
|
| T |
30398771 |
gtgag |
30398775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 223
Target Start/End: Original strand, 30434481 - 30434616
Alignment:
| Q |
88 |
ttggaatgtgcgctattttgtcatagtcctcccctgttccttcattacatcgctcctttaatgttgggcaatcacaaatagtcagtacctcaagtgaagt |
187 |
Q |
| |
|
||||||| || ||||| ||||| | |||||||||||||| || || ||||| ||||||||||||||||||||| |||| ||| | |||||| ||||| |
|
|
| T |
30434481 |
ttggaatatgagctatcttgtcccaatcctcccctgttccctctttgcatcgttcctttaatgttgggcaatcaatgatagacagaagctcaagagaagt |
30434580 |
T |
 |
| Q |
188 |
gagatttcgaatacattctggcaaggatctcaatcc |
223 |
Q |
| |
|
||| | |||||||| || |||||| ||| |||||| |
|
|
| T |
30434581 |
gaggtgtcgaataccctccggcaagcatcgcaatcc |
30434616 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 639
Target Start/End: Complemental strand, 30522731 - 30522589
Alignment:
| Q |
497 |
aactcactgttacatccaattacaatgaggtctttaagggatggaaggaattgcaacacaagtttagggcaaccacaaatggtcaaatcagaaagacgag |
596 |
Q |
| |
|
|||||| ||||||||||| ||||||||| ||||||| |||| |||| | ||||| ||||||||||||||||| |||| ||| | |||||| || | |
|
|
| T |
30522731 |
aactcattgttacatccatctacaatgagttctttaaacgatgaaaggtgtggcaacccaagtttagggcaaccaacgatggccaacttagaaaggcggg |
30522632 |
T |
 |
| Q |
597 |
ggaacatctcccccctttccattttcaataaccgttcaaagtt |
639 |
Q |
| |
|
| || |||||||| |||||| |||||| |||||||| ||||| |
|
|
| T |
30522631 |
gaaaaatctcccctgtttccactttcaacaaccgttccaagtt |
30522589 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 639
Target Start/End: Complemental strand, 30563071 - 30562929
Alignment:
| Q |
497 |
aactcactgttacatccaattacaatgaggtctttaagggatggaaggaattgcaacacaagtttagggcaaccacaaatggtcaaatcagaaagacgag |
596 |
Q |
| |
|
|||||| ||||||||||| ||||||||| ||||||| |||| |||| | ||||| ||||||||||||||||| |||| ||| | |||||| || | |
|
|
| T |
30563071 |
aactcattgttacatccatctacaatgagttctttaaacgatgaaaggtgtggcaacccaagtttagggcaaccaacgatggccaacttagaaaggcggg |
30562972 |
T |
 |
| Q |
597 |
ggaacatctcccccctttccattttcaataaccgttcaaagtt |
639 |
Q |
| |
|
| || |||||||| |||||| |||||| |||||||| ||||| |
|
|
| T |
30562971 |
gaaaaatctcccctgtttccactttcaacaaccgttccaagtt |
30562929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 30339970 - 30339834
Alignment:
| Q |
87 |
tttggaatgtgcgctattttgtcatagtcctcccctgttccttcattacatcgctcctttaatgttgggcaatcacaaatagtcagtacctcaagtgaag |
186 |
Q |
| |
|
|||||||| || ||||| ||||| | |||||||||||||| || || ||||| |||| |||||||||||||| | |||||||| | |||||| |||| |
|
|
| T |
30339970 |
tttggaatatgagctatcttgtcccaatcctcccctgttccctctttgcatcgttcctctaatgttgggcaattaatgatagtcagaagctcaagagaag |
30339871 |
T |
 |
| Q |
187 |
tgagatttcgaatacattctggcaaggatctcaatcc |
223 |
Q |
| |
|
|||| | |||||||| || |||||| ||| |||||| |
|
|
| T |
30339870 |
tgaggtgtcgaataccctccggcaagcatcgcaatcc |
30339834 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 222
Target Start/End: Original strand, 30429526 - 30429664
Alignment:
| Q |
84 |
aattttggaatgtgcgctattttgtcatagtcctcccctgttccttcattacatcgctcctttaatgttgggcaatcacaaatagtcagtacctcaagtg |
183 |
Q |
| |
|
||||| |||||||| |||| ||||| ||||||| ||| |||| || |||||||||||| ||| | ||||||| || |||| | ||| |||||||||| |
|
|
| T |
30429526 |
aatttaggaatgtgttctatcttgtcccagtcctctcctattccctccttacatcgctccgttacagctgggcaaccataaattgccagaacctcaagtg |
30429625 |
T |
 |
| Q |
184 |
aagtgagatttcgaatacattctggcaaggatctcaatc |
222 |
Q |
| |
|
| ||||| | |||||| |||||||||| ||||||||| |
|
|
| T |
30429626 |
atgtgaggtgcagaataccttctggcaagcatctcaatc |
30429664 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 494 - 639
Target Start/End: Original strand, 30429948 - 30430091
Alignment:
| Q |
494 |
agtaactcactgttacatccaattacaatgaggtctttaagggatggaaggaattgcaacacaagtttagggcaaccacaaatggtcaaatcagaaagac |
593 |
Q |
| |
|
||||||||| ||||||||||| ||||||||| ||||||| |||| |||| || ||||| |||||||| |||||||| ||||| ||| | |||||| |
|
|
| T |
30429948 |
agtaactcattgttacatccatctacaatgagttctttaaaagatgaaaggcatggcaacccaagtttaaggcaaccaacaatggccaacttagaaaggt |
30430047 |
T |
 |
| Q |
594 |
gagggaacatctcccccctttccattttcaataaccgttcaaagtt |
639 |
Q |
| |
|
| || || |||| ||| |||||| |||||| |||||||| ||||| |
|
|
| T |
30430048 |
ggggaaaaatct--cccatttccactttcaacaaccgttccaagtt |
30430091 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 223
Target Start/End: Complemental strand, 30243818 - 30243681
Alignment:
| Q |
86 |
ttttggaatgtgcgctattttgtcatagtcctcccctgttccttcattacatcgctcctttaatgttgggcaatcacaaatagtcagtacctcaagtgaa |
185 |
Q |
| |
|
||||||||| || ||||| ||||| | |||||||||||||| || || ||||| |||| ||||||||| || | | ||||| ||| |||||||| ||| |
|
|
| T |
30243818 |
ttttggaatatgagctatcttgtcccaatcctcccctgttccctctttgcatcgttcctctaatgttggacatttataaatattcaaaacctcaagagaa |
30243719 |
T |
 |
| Q |
186 |
gtgagatttcgaatacattctggcaaggatctcaatcc |
223 |
Q |
| |
|
||||| | |||||||| || |||||| ||| |||||| |
|
|
| T |
30243718 |
gtgaggtgtcgaataccctccggcaagcatcgcaatcc |
30243681 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 480 - 629
Target Start/End: Original strand, 30399051 - 30399200
Alignment:
| Q |
480 |
tagatattggccttagtaactcactgttacatccaattacaatgaggtctttaagggatggaaggaattgcaacacaagtttagggcaaccacaaatggt |
579 |
Q |
| |
|
|||| |||| ||| ||||||||| |||||||||| | |||| |||| |||||| |||||||| || ||| |||||||||||||| | || | |
|
|
| T |
30399051 |
tagagattgacctcagtaactcattgttacatcccaatacatagagggatttaagagatggaagacatggcactccaagtttagggcaagctgtgattct |
30399150 |
T |
 |
| Q |
580 |
caaatcagaaagacgagggaacatctcccccctttccattttcaataacc |
629 |
Q |
| |
|
||| |||||||||| ||| ||||||||||| ||||||| ||||||||||| |
|
|
| T |
30399151 |
caactcagaaagacaaggaaacatctcccctctttccactttcaataacc |
30399200 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 223
Target Start/End: Original strand, 29870845 - 29870980
Alignment:
| Q |
88 |
ttggaatgtgcgctattttgtcatagtcctcccctgttccttcattacatcgctcctttaatgttgggcaatcacaaatagtcagtacctcaagtgaagt |
187 |
Q |
| |
|
||||||| || ||||| ||||| | |||||||||||||| || || ||||| |||| ||||||||||||| | ||| | ||| | |||||||||||| |
|
|
| T |
29870845 |
ttggaatatgagctatcttgtcccaatcctcccctgttccctctttgcatcgttcctctaatgttgggcaaccctcaattgccagaagctcaagtgaagt |
29870944 |
T |
 |
| Q |
188 |
gagatttcgaatacattctggcaaggatctcaatcc |
223 |
Q |
| |
|
||| | |||||||| || |||||| ||| |||||| |
|
|
| T |
29870945 |
gaggtgtcgaataccctccggcaagcatcgcaatcc |
29870980 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 84 - 222
Target Start/End: Complemental strand, 30523148 - 30523010
Alignment:
| Q |
84 |
aattttggaatgtgcgctattttgtcatagtcctcccctgttccttcattacatcgctcctttaatgttgggcaatcacaaatagtcagtacctcaagtg |
183 |
Q |
| |
|
|||||||||||||| |||| |||| ||||||| ||| || |||| ||||||||||| || | ||||||| || ||| ||||| |||||||||| |
|
|
| T |
30523148 |
aattttggaatgtgttctatcatgtcccagtcctctcctatttcttccttacatcgctctgctacagctgggcaaccataaactgtcagaacctcaagtg |
30523049 |
T |
 |
| Q |
184 |
aagtgagatttcgaatacattctggcaaggatctcaatc |
222 |
Q |
| |
|
| ||||| | ||||||| |||||||||| ||||||||| |
|
|
| T |
30523048 |
atgtgaggtggcgaataccttctggcaagcatctcaatc |
30523010 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 84 - 222
Target Start/End: Complemental strand, 30563488 - 30563350
Alignment:
| Q |
84 |
aattttggaatgtgcgctattttgtcatagtcctcccctgttccttcattacatcgctcctttaatgttgggcaatcacaaatagtcagtacctcaagtg |
183 |
Q |
| |
|
|||||||||||||| |||| |||| ||||||| ||| || |||| ||||||||||| || | ||||||| || ||| ||||| |||||||||| |
|
|
| T |
30563488 |
aattttggaatgtgttctatcatgtcccagtcctctcctatttcttccttacatcgctctgctacagctgggcaaccataaactgtcagaacctcaagtg |
30563389 |
T |
 |
| Q |
184 |
aagtgagatttcgaatacattctggcaaggatctcaatc |
222 |
Q |
| |
|
| ||||| | ||||||| |||||||||| ||||||||| |
|
|
| T |
30563388 |
atgtgaggtggcgaataccttctggcaagcatctcaatc |
30563350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 212
Target Start/End: Original strand, 26705920 - 26706046
Alignment:
| Q |
86 |
ttttggaatgtgcgctattttgtcatagtcctcccctgttccttcattacatcgctcctttaatgttgggcaatcacaaatagtcagtacctcaagtgaa |
185 |
Q |
| |
|
||||||||| || ||||| ||||| | |||||||||||||| || || ||||| |||| ||||||||||||| ||||| |||| | |||||| ||| |
|
|
| T |
26705920 |
ttttggaatatgagctatcttgtcccaatcctcccctgttccctctttgcatcgttcctctaatgttgggcaactccaaattctcagaaactcaagagaa |
26706019 |
T |
 |
| Q |
186 |
gtgagatttcgaatacattctggcaag |
212 |
Q |
| |
|
||||| | |||||||| ||||||||| |
|
|
| T |
26706020 |
gtgaggtgtcgaataccctctggcaag |
26706046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University