View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11386_high_31 (Length: 329)
Name: NF11386_high_31
Description: NF11386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11386_high_31 |
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Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 5 - 311
Target Start/End: Original strand, 2582363 - 2582672
Alignment:
| Q |
5 |
tctattttatgcattaatatacttaaaataccctctctatgtgcatacagttaatctcgatttt--gtattccaagacacttggagaatctcaaaagaga |
102 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |
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| T |
2582363 |
tctattttatgcattaatatacttaaaataccctctctatgtgcatacagttaatctcgattttttgtattccaagacacttagagaatctcaaaagaga |
2582462 |
T |
|
| Q |
103 |
ttatgggagtgtcatagagaaggttccatgagttaatgaatttatagcctaattttccaacgcattcgaggaacttgatgcagcaaagtgagtgttgtag |
202 |
Q |
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| T |
2582463 |
ttatgggagtgtcatagagaaggttccatgagttaatgaatttatagcctaattttccaacgcattcgaggaacttgatgcagcaaagtgagtattgtag |
2582562 |
T |
|
| Q |
203 |
-aannnnnnnnnnacgaaactaaattaacctatttaaattgacaccatacaaaattaaatctgaaacctcgaggaagaatatactccaaaatcctaagtc |
301 |
Q |
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|| |||||||||||||| | ||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||| |||||||||| |
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| T |
2582563 |
aaattttctttttacgaaactaaattagcttatttaaattgacaccatacaaaatcaaatctgaaatctcgaggaagaacatactccaagatcctaagtc |
2582662 |
T |
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| Q |
302 |
gacaccatca |
311 |
Q |
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|||||||||| |
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| T |
2582663 |
gacaccatca |
2582672 |
T |
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