View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11386_low_33 (Length: 339)
Name: NF11386_low_33
Description: NF11386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11386_low_33 |
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Alignment Details
Target: chr3 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 1573174 - 1573477
Alignment:
| Q |
1 |
aaattttgaactaaatgataactacttacatgcggttccgggtacgggtatgtgggaatgtgtggacttttacccggtttcaataaacgggtcaaatggt |
100 |
Q |
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| T |
1573174 |
aaattttgaactaaatgataactacttacatgcggttccgggtacgggtatgtgggaatgtgtggatttttacccggtttctataaacgggtcaaatggt |
1573273 |
T |
|
| Q |
101 |
ttggacacatcagtaaatggaccacatgttaagcatgtgttaaaggctagtttggatgatacaagagtggatagttatgcaattgggacttattttattg |
200 |
Q |
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| T |
1573274 |
ttggacacatcagtaaatggaccacatgttaagcatgtgttaaaggctagtttggatgatacaagagtggatagttatgcaattgggacttattttattg |
1573373 |
T |
|
| Q |
201 |
aaaatgatacatggattcctgataacccacttgaggacgtgggtattgggttgcttttggactatggaatatactatgcttcaaagactttctatgatca |
300 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1573374 |
aaaatgatacatggattcctgataacccacttgaggatgtgggtattgggttgcttttggactatggaatatactatgcttcaaagactttctatgatca |
1573473 |
T |
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| Q |
301 |
agtg |
304 |
Q |
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|||| |
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| T |
1573474 |
agtg |
1573477 |
T |
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